pycom13g20290

Protein transport protein Sec24-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0000554
Physical Location & Seq
Forward (+)
16312985 .. 16325932
12948 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g20290.10

Sequence Viewer

Length: 2994 bp
ATGCAGACCCGCCCTGATCCATTAGCCGATAATATGCAGAATTTGAATCTTAATCGACCGCCTTCCATGCCTAATACTGCCCCTCCTAGACCATCCCCTTTCGGCCAACCGCCGCCTTTTCCTTCATCAGCCCCTCCTGCTGCTGCACCACCTCCTTTTTCACGGCCCGGCCCTCCCCCGGCTGCATTTGCAAGACCTATAGCACCAGCACCGCGATCGGGAGCCCCGCAACCAACATTATCTCCTGCCACCACCCCAGTAAGACCCTCCGGGCCGCCCGTTGGCCAGCCTTCATCTTTTCCGTCTCGACCGCCTCCTGGGTCATTTCCTCCTGTGGGTGGGGTAGCTCCTGCTTCTGCGCCAACGCCAATTGGTCCAGTTTCGACGCCAGCGCTGGCATATCCTAGGCCAGGTCCTCAGAGCATGCCGCCTACGACTGCACCAGGTAGAATGATGAGTAATGGGCCGCCAATGTTTGGTTCCGGGGCTATGCCGGGTGGGCCTCGTTTCCCTCCGAGTGGAAATGCACCTCAACCACCTGTTGGGCATCCACCAGCAATGGCACGGGCACCACCAACGGGTCCTCCACGAACTCCAACCATGCATTCTGTGCTGGGTGGTCCAGCAGTTAGTGGCCCACCAGGTCCTACTGTTCAGCAGCCACCACCATTTTCAGCAGCACCGCCATTTCTAGCAGCACCTCAACCAATGCGGCCACCACCTCCAGGTTCTCCCTATGGCTCACAGACGTGGCAAGTGCAACAAGGACAGGTGCCTCCACCTTCACATTTTCCGGGTTCTGCTCAACCACCTAGAATGTTTGGAATGCCACCCCCACCGTTACCAAATCAGTCCATGACTACTATCTCACCTGCTGGTCAAACTGGTACTCCTTTGGCTGGGTCATCCAAGATTGATCCCACTCAAATTCCTCGGCCTATACCAAGTTCGTCGGTGCTCATTCATGAAACTCGTCAGGGCAATCAGGCAAATCCACCTCCGCCTGCTACAACTGATTATATTGTCAGAGACACTGGGAATTGCAGTCCACGATACATGAGGTGCACCATCAATCAGATACCATGCACTGGTGATCTTTTAACAACATCAGGGATGCTGTTAGCTTTGTTGGTTGAACCTTTTGCCCTTCCTCATCCAAATGAGGAACCAATCCAAGTTGTGGATTTTGGTGAAAGTGGTCCCGTTCGATGCTCTCGCTGCAAAGGCTACATAAATCCTTTTATGAAGTTCATTGACCAGGGCAGGAAATTCATCTGTAATCTTTGTGGATTTACCGATGAGACTCCCCGTGACTACCACTGCAATCTTGGTCCAGATGGTAGACGTAGAGATGCTGATGAGAGGCCTGAGCTATGTAGAGGAACAGTTGAATTTGTTGCTTCAAAAGAATACATGGTCCGTGATCCCATGCCAGCTGTGTACTTCTTCCTCATTGATGTATCCATGAATGCCATTCAAACTGGTGCAACTGCTGCAGCTTGCAGTGCAATCAGTCAAGTTATTCCCGATCTTCCGCCTTTGATGCTTATTGTTCCAGATGTGCAAGATGTTTACACTCCTCTGGAGACTGATGTAGTTGTCCAGCTTTCTGAGTGCCGCCAACATTTGGAGCAATTGTTGGAAAGTATTCCAACCATGTTTCAAAACAGTAAAATTGCTGAATCAGCCTTTGGTGCAGCAATCAAGGCTGCTTTCTTGGCAATTAAGAGTACTGGAGGGAAACTTTTGGTGTTTCAGTCAGTGTTGGCATCAACTGGAATTGGAGCGCTCTCTGCTAGAGAAGCTGAAGGAAGAGCTAATATATCTTCAGCTGATAAGGAGCCCCATAAATTACTCCAACCAGCTGACAAAACTTTAAAGACAATGGCAGTTGAATTTGCTGAATATCAGGTTTGTGTCGACTTATTTATCACTACCCAGTCATACATAGACATTGCTTCTATCTCTGTCATCCCAAGAACAACTGGAGGGCAGGTTTACTATTATTATCCCTTCTCAGCTGTCTCTGATCCTGCAAAGCTCTACAACGATCTTAGATGGAATGTCACAAGGCCTCAAGGTTTTGAGGCGGTGATGCGTGTAAGATGCAGCCAGGGTATCCAAGTTCAAGAGTACCATGGAAGCTTTTGCAAACGTATTCCTACGGATGTTGACCTACCTGGGATTGACTGTGACAAAACTATTATGGTGACCTTAAAACATGATGATAAATTACAGGATGGCTCAGAATGTGGTTTCCAGTGTGCCGTTTTATACACAACTGTGTATGGCCAACGGAGAATTCGAGTTGCGACTTTATCTCTGCCATGCACAAGTATGCTAAGTAATCTGTTCCGTGCTGCTGATTTGGACGCTCAGTTTACATGTTTCATGAAGCAAGCGGCAAACGAAATCCCTTCAAGTCCCCTCTTGCGTGTACGGGAACAAGTGACAAATCTGTGCATCAGTAGTCTGCTTTCATATCGTAAATTTTGTGCTACTGTATCATCTTCTGGACAGCTTATTCTTCCGGAGGCACTGAAGCTCCTGCCTCTATACACCCTTGCATTAATCAAAAGTACGGGGCTACGAACTGATGGAAAAATAGATGAGCGGTCCTTCTGGATCAATCATGTTTCTTCCCTTTCTGTTCCTTTGGCGGTTCCATTGGTGTACCCCAGAATGGTGGCTATTCATGACTTAGAATCAAAAAAGGAGGGTGATGAGTCTCTAATTCCTCTGGTGATTCCGCTTTCGAGCGAACATGTGAGTGATGGGGGAATTTATCTTCTCGAGAATGGCGAGGACTGTTTAATATATATTGGGAACTTGGTAGATTCTAGAATTTTGCAACAACTGTTTGGAATCGCCTCTGCTGATGAACTTCCTACTCAGTTTGTGTTACAGCGGTATGATAATCCATTATCGAAGAAGCTGAATGATGTGGTAAATGAAATACGGCGCCAGAGATGTTCCTACCTTCGGTACGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

998

Amino Acids

107.39

Weight (kDa)

7.72

Isoelectric Point (pI)

53.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000554)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT4G32640 AT4G32640
fragaria_vesca FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000
malus_domestica MD02G1169200.v1.1 MD13G1230500.v1.1 MD15G1281700.v1.1 MD16G1009900.v1.1 MD16G1235300.v1.1
prunus_persica Prupe.1G056500_v2.0.a1 Prupe.1G056500_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1
pyrus_communis pycom02g13590 pycom13g20290 pycom15g24480 pycom16g00970 pycom16g19630
rosa_chinensis RchiOBHm_Chr4g0396591 RchiOBHm_Chr4g0445631
rosa_laevigata RLG00000005723 RLG00000009518
rosa_multiflora Rmu_co8031254.1_g000001 Rmu_co8351119.1_g000001 Rmu_sc0003637.1_g000024 Rmu_sc0010969.1_g000001 Rmu_sc0019383.1_g000002
rosa_roxburghii Rroxscaffold_5G00341440 Rroxscaffold_5G00386110
rosa_rugosa Rorug03G0348600 Rorug03G0348700 Rorug04G0363200 Rorug04G0363300 Rorug04G0363400 Rorug04G0363500
rosa_samantha Rh4AG070600 Rh4AG424700 Rh4AG425100 Rh4BG068500 Rh4BG436900 Rh4CG076300 Rh4CG451400 Rh4DG065600 Rh4DG433400
rosa_wichuraiana Rw4G005630 Rw4G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 880
Acc36I ACCTGC 2 cut(s) 880, 1984
AccB1I GGYRCC 3 cut(s) 568, 772, 2961
AccB7I CCANNNNNTGG 5 cut(s) 476, 542, 1088, 1180, 1627
AccBSI CCGCTC 1 cut(s) 2614
AccI GTMKAC 2 cut(s) 1342, 1920
AccII CGCG 1 cut(s) 214
AccIII TCCGGA 1 cut(s) 2530
AclWI GGATC 5 cut(s) 11, 911, 1418, 2024, 2633
AcoI YGGCCR 4 cut(s) 103, 283, 713, 2290
AcsI RAATTY 9 cut(s) 40, 927, 1268, 1391, 1895, 2301, 2489, 2781, 2844
AcuI CTGAAG 3 cut(s) 1812, 1827, 2561
AcyI GRCGYC 2 cut(s) 386, 2962
AfaI GTAC 8 cut(s) 889, 1442, 1732, 2135, 2439, 2581, 2675, 2987
AfeI AGCGCT 2 cut(s) 393, 1788
AflIII ACRYGT 2 cut(s) 2384, 2764
AgsI TTSAA 9 cut(s) 46, 1136, 1391, 1404, 1478, 1664, 1895, 2129, 2421
AjiI CACGTC 1 cut(s) 750
AjnI CCWGG 8 cut(s) 316, 409, 442, 640, 724, 1257, 2112, 2179
AjuI GAANNNNNNNTTGG 8 cut(s) 463, 495, 589, 621, 1674, 1706, 2286, 2318
AleI CACNNNNGTG 2 cut(s) 748, 2282
Alw21I GWGCWC 2 cut(s) 960, 1067
Alw26I GTCTC 6 cut(s) 309, 1023, 1295, 1580, 2029, 2733
Alw44I GTGCAC 1 cut(s) 1063
AlwI GGATC 5 cut(s) 11, 911, 1418, 2024, 2633
Ama87I CYCGRG 1 cut(s) 2792
Aor13HI TCCGGA 1 cut(s) 2530
Aor51HI AGCGCT 2 cut(s) 393, 1788
ApaLI GTGCAC 1 cut(s) 1063
ApoI RAATTY 9 cut(s) 40, 927, 1268, 1391, 1895, 2301, 2489, 2781, 2844
AseI ATTAAT 1 cut(s) 2570
Asp700I GAANNNNTTC 1 cut(s) 1647
AspA2I CCTAGG 1 cut(s) 404
AspLEI GCGC 4 cut(s) 361, 394, 1789, 2964
AsuC2I CCSGG 6 cut(s) 168, 179, 271, 484, 495, 795
AsuHPI GGTGA 7 cut(s) 861, 1103, 1202, 2104, 2221, 2732, 2755
AvaI CYCGRG 1 cut(s) 2792
AvaII GGWCC 9 cut(s) 374, 413, 581, 620, 644, 1199, 1331, 1417, 2616
AvrII CCTAGG 1 cut(s) 404
BaeGI GKGCMC 2 cut(s) 571, 1067
BalI TGGCCA 2 cut(s) 285, 2292
BanI GGYRCC 3 cut(s) 568, 772, 2961
BanII GRGCYC 2 cut(s) 226, 1845
Bbv12I GWGCWC 2 cut(s) 960, 1067
BccI CCATC 7 cut(s) 100, 1076, 1331, 2052, 2234, 2591, 2768
BceAI ACGGC 3 cut(s) 179, 2252, 2975
BcgI CGANNNNNNTGC 2 cut(s) 198, 232
BciT130I CCWGG 8 cut(s) 318, 411, 444, 642, 726, 1259, 2114, 2181
BciVI GTATCC 2 cut(s) 1471, 2129
BcnI CCSGG 6 cut(s) 168, 179, 271, 484, 495, 795
BcoDI GTCTC 6 cut(s) 309, 1023, 1295, 1580, 2029, 2733
BfaI CTAG 6 cut(s) 87, 405, 692, 813, 1797, 2841
BfmI CTRYAG 2 cut(s) 198, 1494
BfoI RGCGCY 3 cut(s) 395, 1790, 2965
BfuAI ACCTGC 2 cut(s) 880, 1984
BfuI GTATCC 2 cut(s) 1471, 2129
BglI GCCNNNNNGGC 1 cut(s) 499
BlnI CCTAGG 1 cut(s) 404
BmcAI AGTACT 1 cut(s) 1732
Bme18I GGWCC 9 cut(s) 374, 413, 581, 620, 644, 1199, 1331, 1417, 2616
BmeT110I CYCGRG 1 cut(s) 2792
BmgBI CACGTC 1 cut(s) 750
BmrI ACTGGG 3 cut(s) 251, 1044, 1933
BmsI GCATC 9 cut(s) 556, 1104, 1199, 1342, 1533, 1778, 2085, 2096, 2472
BmuI ACTGGG 3 cut(s) 251, 1044, 1933
BpmI CTGGAG 4 cut(s) 708, 1604, 1755, 2007
Bpu10I CCTNAGC 1 cut(s) 1368
BpuEI CTTGAG 1 cut(s) 2061
BpuMI CCSGG 6 cut(s) 168, 179, 271, 484, 495, 795
BsaHI GRCGYC 2 cut(s) 386, 2962
BsaJI CCNNGG 9 cut(s) 177, 317, 404, 483, 932, 1258, 2113, 2137, 2180
BsaWI WCCGGW 1 cut(s) 2530
Bse3DI GCAATG 2 cut(s) 564, 1953
BseAI TCCGGA 1 cut(s) 2530
BseBI CCWGG 8 cut(s) 318, 411, 444, 642, 726, 1259, 2114, 2181
BseDI CCNNGG 9 cut(s) 177, 317, 404, 483, 932, 1258, 2113, 2137, 2180
BseGI GGATG 8 cut(s) 92, 547, 905, 1119, 1153, 1971, 2173, 2245
BseMI GCAATG 2 cut(s) 564, 1953
BseMII CTCAG 7 cut(s) 431, 1359, 1602, 2031, 2259, 2390, 2906
BseRI GAGGAG 1 cut(s) 1569
BseSI GKGCMC 2 cut(s) 571, 1067
BseYI CCCAGC 2 cut(s) 613, 899
BsgI GTGCAG 3 cut(s) 129, 423, 1716
Bsh1236I CGCG 1 cut(s) 214
Bsh1285I CGRYCG 3 cut(s) 59, 218, 311
BshNI GGYRCC 3 cut(s) 568, 772, 2961
BsiEI CGRYCG 3 cut(s) 59, 218, 311
BsiHKAI GWGCWC 2 cut(s) 960, 1067
BsiHKCI CYCGRG 1 cut(s) 2792
BsiSI CCGG 7 cut(s) 168, 179, 270, 483, 494, 794, 2531
BslFI GGGAC 2 cut(s) 1185, 2409
BsmAI GTCTC 6 cut(s) 309, 1023, 1295, 1580, 2029, 2733
BsmBI CGTCTC 1 cut(s) 309
BsmFI GGGAC 2 cut(s) 1185, 2409
BsmI GAATGC 3 cut(s) 604, 831, 1474
BsoBI CYCGRG 1 cut(s) 2792
Bsp1286I GDGCHC 5 cut(s) 226, 571, 960, 1067, 1845
Bsp13I TCCGGA 1 cut(s) 2530
Bsp143I GATC 9 cut(s) 16, 215, 916, 1093, 1423, 1528, 2029, 2050, 2625
Bsp19I CCATGG 1 cut(s) 2137
BspCNI CTCAG 7 cut(s) 430, 1360, 1603, 2030, 2258, 2389, 2905
BspEI TCCGGA 1 cut(s) 2530
BspFNI CGCG 1 cut(s) 214
BspHI TCATGA 3 cut(s) 964, 2391, 2695
BspMAI CTGCAG 1 cut(s) 1498
BspMI ACCTGC 2 cut(s) 880, 1984
BspPI GGATC 5 cut(s) 11, 911, 1418, 2024, 2633
BspQI GCTCTTC 1 cut(s) 1807
BspT107I GGYRCC 3 cut(s) 568, 772, 2961
BsrBI CCGCTC 1 cut(s) 2614
BsrDI GCAATG 2 cut(s) 564, 1953
BssECI CCNNGG 9 cut(s) 177, 317, 404, 483, 932, 1258, 2113, 2137, 2180
BssMI GATC 9 cut(s) 16, 215, 916, 1093, 1423, 1528, 2029, 2050, 2625
BssNI GRCGYC 2 cut(s) 386, 2962
BssT1I CCWWGG 2 cut(s) 404, 2137
Bst2UI CCWGG 8 cut(s) 318, 411, 444, 642, 726, 1259, 2114, 2181
Bst4CI ACNGT 9 cut(s) 652, 840, 1387, 1670, 2192, 2284, 2503, 2810, 2859
Bst6I CTCTTC 1 cut(s) 1807
BstACI GRCGYC 2 cut(s) 386, 2962
BstAPI GCANNNNNTGC 2 cut(s) 610, 1493
BstC8I GCNNGC 8 cut(s) 287, 390, 396, 425, 1005, 1434, 1501, 2400
BstDSI CCRYGG 1 cut(s) 2137
BstEII GGTNACC 1 cut(s) 2209
BstENI CCTNNNNNAGG 1 cut(s) 408
BstF5I GGATG 8 cut(s) 92, 547, 905, 1119, 1153, 1971, 2173, 2245
BstFNI CGCG 1 cut(s) 214
BstH2I RGCGCY 3 cut(s) 395, 1790, 2965
BstHHI GCGC 4 cut(s) 361, 394, 1789, 2964
BstKTI GATC 9 cut(s) 19, 218, 919, 1096, 1426, 1531, 2032, 2053, 2628
BstMAI GTCTC 6 cut(s) 309, 1023, 1295, 1580, 2029, 2733
BstMBI GATC 9 cut(s) 16, 215, 916, 1093, 1423, 1528, 2029, 2050, 2625
BstMCI CGRYCG 3 cut(s) 59, 218, 311
BstNI CCWGG 8 cut(s) 318, 411, 444, 642, 726, 1259, 2114, 2181
BstNSI RCATGY 3 cut(s) 427, 2388, 2768
BstPI GGTNACC 1 cut(s) 2209
BstSFI CTRYAG 2 cut(s) 198, 1494
BstSLI GKGCMC 2 cut(s) 571, 1067
BstUI CGCG 1 cut(s) 214
BstXI CCANNNNNNTGG 1 cut(s) 2686
BsuI GTATCC 2 cut(s) 1471, 2129
BtgI CCRYGG 1 cut(s) 2137
BtrI CACGTC 1 cut(s) 750
BtsCI GGATG 8 cut(s) 92, 547, 905, 1119, 1153, 1971, 2173, 2245
BtsI GCAGTG 2 cut(s) 1318, 1510
BtsIMutI CAGTG 7 cut(s) 1032, 1086, 1318, 1510, 1767, 2267, 2537
BveI ACCTGC 2 cut(s) 880, 1984
Cac8I GCNNGC 8 cut(s) 287, 390, 396, 425, 1005, 1434, 1501, 2400
CciI TCATGA 3 cut(s) 964, 2391, 2695
CfoI GCGC 4 cut(s) 361, 394, 1789, 2964
CseI GACGC 2 cut(s) 394, 2381
CsiI ACCWGGT 2 cut(s) 442, 640
Csp6I GTAC 8 cut(s) 888, 1441, 1731, 2134, 2438, 2580, 2674, 2986
CviQI GTAC 8 cut(s) 888, 1441, 1731, 2134, 2438, 2580, 2674, 2986
DinI GGCGCC 1 cut(s) 2963
DpnI GATC 9 cut(s) 18, 217, 918, 1095, 1425, 1530, 2031, 2052, 2627
DpnII GATC 9 cut(s) 16, 215, 916, 1093, 1423, 1528, 2029, 2050, 2625
DraI TTTAAA 1 cut(s) 1878
EaeI YGGCCR 4 cut(s) 103, 283, 713, 2290
Eam1104I CTCTTC 1 cut(s) 1807
EarI CTCTTC 1 cut(s) 1807
EciI GGCGGA 2 cut(s) 990, 1524
Eco130I CCWWGG 2 cut(s) 404, 2137
Eco147I AGGCCT 2 cut(s) 1366, 2074
Eco24I GRGCYC 2 cut(s) 226, 1845
Eco47I GGWCC 9 cut(s) 374, 413, 581, 620, 644, 1199, 1331, 1417, 2616
Eco47III AGCGCT 2 cut(s) 393, 1788
Eco57I CTGAAG 3 cut(s) 1812, 1827, 2561
Eco88I CYCGRG 1 cut(s) 2792
Eco91I GGTNACC 1 cut(s) 2209
EcoNI CCTNNNNNAGG 1 cut(s) 408
EcoO109I RGGNCCY 3 cut(s) 413, 581, 644
EcoO65I GGTNACC 1 cut(s) 2209
EcoRI GAATTC 1 cut(s) 2301
EcoRII CCWGG 8 cut(s) 316, 409, 442, 640, 724, 1257, 2112, 2179
EcoT14I CCWWGG 2 cut(s) 404, 2137
EcoT22I ATGCAT 1 cut(s) 606
EcoT38I GRGCYC 2 cut(s) 226, 1845
EgeI GGCGCC 1 cut(s) 2963
EheI GGCGCC 1 cut(s) 2963
ErhI CCWWGG 2 cut(s) 404, 2137
Esp3I CGTCTC 1 cut(s) 309
FaqI GGGAC 2 cut(s) 1185, 2409
FauI CCCGC 2 cut(s) 17, 234
FblI GTMKAC 2 cut(s) 1342, 1920
FokI GGATG 8 cut(s) 79, 534, 892, 1126, 1140, 1958, 2180, 2252
FriOI GRGCYC 2 cut(s) 226, 1845
FspBI CTAG 6 cut(s) 87, 405, 692, 813, 1797, 2841
GlaI GCGC 4 cut(s) 360, 393, 1788, 2963
GsaI CCCAGC 2 cut(s) 617, 903
GsuI CTGGAG 4 cut(s) 708, 1604, 1755, 2007
HaeII RGCGCY 3 cut(s) 395, 1790, 2965
HapII CCGG 7 cut(s) 168, 179, 270, 483, 494, 794, 2531
HgaI GACGC 2 cut(s) 394, 2381
HhaI GCGC 4 cut(s) 361, 394, 1789, 2964
Hin1I GRCGYC 2 cut(s) 386, 2962
Hin6I GCGC 4 cut(s) 359, 392, 1787, 2962
HinP1I GCGC 4 cut(s) 359, 392, 1787, 2962
HincII GTYRAC 2 cut(s) 1921, 2173
HindII GTYRAC 2 cut(s) 1921, 2173
HindIII AAGCTT 1 cut(s) 2143
HinfI GANTC 8 cut(s) 46, 1303, 1682, 2705, 2726, 2746, 2837, 2865
HpaII CCGG 7 cut(s) 168, 179, 270, 483, 494, 794, 2531
HphI GGTGA 7 cut(s) 861, 1103, 1202, 2104, 2221, 2732, 2755
Hpy188I TCNGA 7 cut(s) 420, 516, 1028, 1077, 1612, 2029, 2248
Hpy99I CGWCG 2 cut(s) 388, 955
HpyCH4III ACNGT 9 cut(s) 652, 840, 1387, 1670, 2192, 2284, 2503, 2810, 2859
HpyCH4IV ACGT 3 cut(s) 749, 1345, 2155
HpySE526I ACGT 3 cut(s) 749, 1345, 2155
Hsp92I GRCGYC 2 cut(s) 386, 2962
HspAI GCGC 4 cut(s) 359, 392, 1787, 2962
KasI GGCGCC 1 cut(s) 2961
Kpn2I TCCGGA 1 cut(s) 2530
Kzo9I GATC 9 cut(s) 16, 215, 916, 1093, 1423, 1528, 2029, 2050, 2625
LguI GCTCTTC 1 cut(s) 1807
LmnI GCTCC 6 cut(s) 221, 352, 1630, 1784, 1840, 2550
LweI GCATC 9 cut(s) 556, 1104, 1199, 1342, 1533, 1778, 2085, 2096, 2472
MabI ACCWGGT 2 cut(s) 442, 640
MaeI CTAG 6 cut(s) 87, 405, 692, 813, 1797, 2841
MaeII ACGT 3 cut(s) 749, 1345, 2155
MaeIII GTNAC 7 cut(s) 840, 1310, 2065, 2192, 2209, 2449, 2901
MalI GATC 9 cut(s) 18, 217, 918, 1095, 1425, 1530, 2031, 2052, 2627
MbiI CCGCTC 1 cut(s) 2614
MboI GATC 9 cut(s) 16, 215, 916, 1093, 1423, 1528, 2029, 2050, 2625
MboII GAAGA 9 cut(s) 1438, 1523, 1818, 1824, 2502, 2519, 2631, 2780, 2941
MfeI CAATTG 2 cut(s) 369, 1634
MhlI GDGCHC 5 cut(s) 226, 571, 960, 1067, 1845
MlsI TGGCCA 2 cut(s) 285, 2292
MluNI TGGCCA 2 cut(s) 285, 2292
Mly113I GGCGCC 1 cut(s) 2962
MlyI GAGTC 2 cut(s) 1297, 2735
MmeI TCCRAC 4 cut(s) 620, 1620, 1676, 1882
Mox20I TGGCCA 2 cut(s) 285, 2292
Mph1103I ATGCAT 1 cut(s) 606
MroI TCCGGA 1 cut(s) 2530
MroXI GAANNNNTTC 1 cut(s) 1647
MscI TGGCCA 2 cut(s) 285, 2292
MseI TTAA 7 cut(s) 51, 1100, 1725, 1877, 2216, 2570, 2813
MslI CAYNNNNRTG 5 cut(s) 748, 1158, 2282, 2336, 2769
Msp20I TGGCCA 2 cut(s) 285, 2292
MspA1I CMGCKG 5 cut(s) 1436, 1832, 1865, 2021, 2908
MspI CCGG 7 cut(s) 168, 179, 270, 483, 494, 794, 2531
MunI CAATTG 2 cut(s) 369, 1634
Mva1269I GAATGC 3 cut(s) 604, 831, 1474
MvaI CCWGG 8 cut(s) 318, 411, 444, 642, 726, 1259, 2114, 2181
MvnI CGCG 1 cut(s) 214
NarI GGCGCC 1 cut(s) 2962
NciI CCSGG 6 cut(s) 168, 179, 271, 484, 495, 795
NcoI CCATGG 1 cut(s) 2137
NdeII GATC 9 cut(s) 16, 215, 916, 1093, 1423, 1528, 2029, 2050, 2625
NmeAIII GCCGAG 1 cut(s) 913
NmuCI GTSAC 5 cut(s) 1310, 2065, 2192, 2209, 2449
NsiI ATGCAT 1 cut(s) 606
NspI RCATGY 3 cut(s) 427, 2388, 2768
OliI CACNNNNGTG 2 cut(s) 748, 2282
PaeI GCATGC 1 cut(s) 427
PaeR7I CTCGAG 1 cut(s) 2792
PagI TCATGA 3 cut(s) 964, 2391, 2695
PaqCI CACCTGC 1 cut(s) 880
PceI AGGCCT 2 cut(s) 1366, 2074
PciI ACATGT 2 cut(s) 2384, 2764
PciSI GCTCTTC 1 cut(s) 1807
PcsI WCGNNNNNNNCGW 2 cut(s) 2302, 2799
PctI GAATGC 3 cut(s) 604, 831, 1474
PdmI GAANNNNTTC 1 cut(s) 1647
PfeI GAWTC 6 cut(s) 46, 1682, 2705, 2746, 2837, 2865
PflMI CCANNNNNTGG 5 cut(s) 476, 542, 1088, 1180, 1627
Ple19I CGATCG 1 cut(s) 218
PleI GAGTC 2 cut(s) 1297, 2734
PluTI GGCGCC 1 cut(s) 2965
PpsI GAGTC 2 cut(s) 1297, 2734
PpuMI RGGWCCY 3 cut(s) 413, 581, 644
PscI ACATGT 2 cut(s) 2384, 2764
PshBI ATTAAT 1 cut(s) 2570
Psp5II RGGWCCY 3 cut(s) 413, 581, 644
Psp6I CCWGG 8 cut(s) 316, 409, 442, 640, 724, 1257, 2112, 2179
PspEI GGTNACC 1 cut(s) 2209
PspFI CCCAGC 2 cut(s) 613, 899
PspGI CCWGG 8 cut(s) 316, 409, 442, 640, 724, 1257, 2112, 2179
PspPPI RGGWCCY 3 cut(s) 413, 581, 644
PstI CTGCAG 1 cut(s) 1498
PvuI CGATCG 1 cut(s) 218
PvuII CAGCTG 4 cut(s) 1436, 1832, 1865, 2021
RsaI GTAC 8 cut(s) 889, 1442, 1732, 2135, 2439, 2581, 2675, 2987
RsaNI GTAC 8 cut(s) 888, 1441, 1731, 2134, 2438, 2580, 2674, 2986
RseI CAYNNNNRTG 5 cut(s) 748, 1158, 2282, 2336, 2769
SalI GTCGAC 1 cut(s) 1919
SapI GCTCTTC 1 cut(s) 1807
SaqAI TTAA 7 cut(s) 51, 1100, 1725, 1877, 2216, 2570, 2813
Sau3AI GATC 9 cut(s) 16, 215, 916, 1093, 1423, 1528, 2029, 2050, 2625
ScaI AGTACT 1 cut(s) 1732
SchI GAGTC 2 cut(s) 1297, 2735
SduI GDGCHC 5 cut(s) 226, 571, 960, 1067, 1845
SexAI ACCWGGT 2 cut(s) 442, 640
SfaNI GCATC 9 cut(s) 556, 1104, 1199, 1342, 1533, 1778, 2085, 2096, 2472
SfcI CTRYAG 2 cut(s) 198, 1494
SfoI GGCGCC 1 cut(s) 2963
Sfr274I CTCGAG 1 cut(s) 2792
SinI GGWCC 9 cut(s) 374, 413, 581, 620, 644, 1199, 1331, 1417, 2616
SlaI CTCGAG 1 cut(s) 2792
SmiMI CAYNNNNRTG 5 cut(s) 748, 1158, 2282, 2336, 2769
SmlI CTYRAG 2 cut(s) 2076, 2792
SmoI CTYRAG 2 cut(s) 2076, 2792
SphI GCATGC 1 cut(s) 427
SseBI AGGCCT 2 cut(s) 1366, 2074
SspDI GGCGCC 1 cut(s) 2961
SspMI CTAG 6 cut(s) 87, 405, 692, 813, 1797, 2841
StuI AGGCCT 2 cut(s) 1366, 2074
StyI CCWWGG 2 cut(s) 404, 2137
TaaI ACNGT 9 cut(s) 652, 840, 1387, 1670, 2192, 2284, 2503, 2810, 2859
TaiI ACGT 3 cut(s) 752, 1348, 2158
TaqI TCGA 9 cut(s) 55, 307, 383, 1207, 1920, 2305, 2756, 2793, 2927
TatI WGTACW 2 cut(s) 1440, 1730
TauI GCSGC 7 cut(s) 115, 277, 430, 469, 715, 1620, 2405
TfiI GAWTC 6 cut(s) 46, 1682, 2705, 2746, 2837, 2865
Tru1I TTAA 7 cut(s) 51, 1100, 1725, 1877, 2216, 2570, 2813
Tru9I TTAA 7 cut(s) 51, 1100, 1725, 1877, 2216, 2570, 2813
TscAI CASTG 7 cut(s) 1039, 1093, 1325, 1510, 1767, 2267, 2544
TseFI GTSAC 5 cut(s) 1310, 2065, 2192, 2209, 2449
Tsp45I GTSAC 5 cut(s) 1310, 2065, 2192, 2209, 2449
TspGWI ACGGA 5 cut(s) 291, 1409, 2180, 2311, 2345
TspRI CASTG 7 cut(s) 1039, 1093, 1325, 1510, 1767, 2267, 2544
Van91I CCANNNNNTGG 5 cut(s) 476, 542, 1088, 1180, 1627
VneI GTGCAC 1 cut(s) 1063
VpaK11BI GGWCC 9 cut(s) 374, 413, 581, 620, 644, 1199, 1331, 1417, 2616
VspI ATTAAT 1 cut(s) 2570
XagI CCTNNNNNAGG 1 cut(s) 408
XapI RAATTY 9 cut(s) 40, 927, 1268, 1391, 1895, 2301, 2489, 2781, 2844
XbaI TCTAGA 1 cut(s) 2840
XceI RCATGY 3 cut(s) 427, 2388, 2768
XcmI CCANNNNNNNNNTGG 1 cut(s) 1325
XhoI CTCGAG 1 cut(s) 2792
XmaJI CCTAGG 1 cut(s) 404
XmiI GTMKAC 2 cut(s) 1342, 1920
XmnI GAANNNNTTC 1 cut(s) 1647
XspI CTAG 6 cut(s) 87, 405, 692, 813, 1797, 2841
ZrmI AGTACT 1 cut(s) 1732
Zsp2I ATGCAT 1 cut(s) 606
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.