Rroxscaffold_5G00386110

Protein transport protein Sec24-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000554
Physical Location & Seq
Reverse (-)
65045520 .. 65055035
9516 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00386110.1

Sequence Viewer

Length: 2709 bp
ATGGTGCCTCCAGGGCCACCTAGACCTGGTAATCATCCACCAAACCCTAATGTTAACCCCAATTCCCAATCTTTATCTGATAATATGCAAAATTTGAATCTCAATCGGCCGCCACCGGCTTCAATGCCCCATCCTAGACCTTCATCGACGCCGTATCCGGCGCCATTTTCTAGGCCTGGCCCTCCTCCTCCGGCGCCGGTGCGGCCTTCTGGACCCCCACCGCCTTCATTTCCTCCGGGAAGGCCTTCTGGCCCGCCTGTTAGTCAAAGTCAACCTTCTCCACTTGGCTACAGACCACCTCCTCCTGCCGGTACTTTCCCACCGAACCGTCAAATGACACCACCTCCGCGTGCCCGACCGGGCGGGATGGGGCCTCCTCCTCCAGTTATGCCTTCACCAGGTGCTGTGATGAATAATGGGCCGCCGAATTTTTCACCAGGAGGTTTGCAGGCTGGGCCACGTTTTCCTCCTCCAGCTGGGATTGCATCACAACTGACGCCGCCGCCTCCTCTCGGACCTCCAACAGCAATGGCAGGAGCTTGGGCCCCACCGCAGCCTCAAACCATGCATGCTTTTTTGGGCAGTGCTAGTCCTCCAGTGCAACAGCAGCGATCACCATTTGCAGGGGCAGCCCAACCTCCTTCAGTTCCTCCTTATGGATCACAACCTTGGTCAATGCAACCCAACCAAGTGCCTCCACCTCCACCAATTTCCCAATCTCCGCAAGCACCTAGAATGTTTGGAATGCCACCACCCATGCCAAATCAGTCTATGACTGCCATATCACATGCTGTGGGTCAAACTGGAGCCCCAGTGGCAGGTCCATCTAAGATTGATCCTAGTCAAATTCCGCGACCCGTTCCGGATTCCTCCGTTGTTCTGCATGAAACTCGCCAAGGCAATCAGGCCAACCCTCCTCCGCCTGCTACAAGCGATTACATTGTCAGAGACACTGGAAACTGCAGCCCACGTAATATGAGGTGCACTATCAATCAGATCCCATGCACTGCTGACCTCTTGACAACATCAGGGATGCAGTTGGCTTTGCTGGTCCAACCCTTGGCCCTTCCTCATCCTTCTGAAGAGCCCATACAAGTCGTGGATTTAGGTGAAAGTGGTCCTGTTCGTTGTTCTCATTGCAAAGGCTATATAAATCCTTTCATGAAGTTCATTGATCAGGGAAGGCAGTTCATCTGCAACTTGTGTGGATTTACTGATGAGACTCCCCGTGACTACCACTGCAACCTTGGTCCAGATGGTAGGCGTAGAGATGCTGATGATAGACCCGAGCTTTGTAGAGGAATGGTGGACATTGTTGCTCCAAAAGAATACATGGTGCGTGATCCAATGCTGGCTATGTATTTCTTCCTTATTGACGTATCCATGAATGCCATACAAACTGGAGCAACTGCAGCCGCATGCACTGCAATCAGTCAAGTTATTTCCGATCTTCCTGAAGGTCCTCGGACAAAGGTGGGAATTGCAACATTTGACTGTACTATTCATTTTTATAATTTGAAACGTGCTTTACAGCAGCCATTGATGCTCATTGTTCCTGATATACAAGATGTTTATACTCCTCTGGAGACTGATGTGATTGTTCAGCTTTCTGAGTGCCATCAGCATTTAGAGCTACTGCTTGAAAGCATCCCATCCATGTTTGAAAATAACAAAACAGCTGACTCAGCCTTTGGTGCTGCAGTCAAGGCTGCATTCTTGGCAATGAAAAGTAATGGGGGAAAACTTTTGGTATTTCAGTCAGTATTGCCATCTGTTGGGACTGGAGCCCTTTCTGCTAGAGAGGCTGAAGGAAGAACAAATACTTCTGCTGGTGAGAAGGAGGCCCATAAATTACTTCAACCAGCTGATAAGACTTTAGAATCAATGGCAATGGAAGTTGCTGAGTATCAGGTTTGTGTAGATATTTTTATTACCACCCAGACTTACATGGACATAGCTTCTATCTCTGTCATTCCAAGAACTACTGGTGGACAGATCTATTATTATTACCCTTTCTCTGCTGTTACTGACACTGCAAAGATCTACAATGATCTTAAATGGAATATTACAAGGCCTCAAGGTTTTGAGGCAGTGATGCGTGTGCGATGCAGCCAGGGTCTCCAAGTTAACGAGTACCGCGGGAACTTCTGCAAGCGCATTCCTACAGATGTTGACCTACCTGGGATTGACTCTGACAAAACTATAATGGTAACCATAAAACATGATGACAAATTGCAGGACGGCTCAGAATGTGTGTTTCAGTGTGCGCTTCTGTACACTACTGTGTATGGCCAAAGAAGGATTCGAGTTTTAACACTAGCCCTACCATGCACAAGTATGCTGAATAATCTTTTCCGCACAGCTGATTTGGATACTCAGTTTGCTTGTATCTTGAAGCAAGGGGCTAATGAAATCCCTTCTAGCCCACTCCTGCAAGTCCGTGAAAGACTGACTGACCGTTGCATCAGCATTCTCTGTTCTTATCGTAAATTTTGTGCTACAGTAACATCAAGTGGACAACTTATTCTTCCAGAAACACTGAAGCTTCTACCTCTATACATCCTTGCTTTAACGAAAAGTACAGGATTGCGATCTTCTGGGAAAATAGATGAACGATCTTTTTGGATCAACTATGTGTCCTCTGTTTCCACTGCTTTAGCTGTAGCACTTGTTTATCCACGGATGCTGGCAATCCACAACCTTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

902

Amino Acids

97.51

Weight (kDa)

8.35

Isoelectric Point (pI)

55.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-Sec23_Sec24 PF04810 374 - 412 8.4e-16 Sec23/Sec24 zinc finger
Sec23_trunk PF04811 449 - 689 2.3e-77 Sec23/Sec24 trunk domain
Sec23_BS PF08033 694 - 778 1.1e-26 Sec23/Sec24 beta-sandwich domain
Sec23_helical PF04815 789 - 886 5.4e-25 Sec23/Sec24 helical domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000554)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT4G32640 AT4G32640
fragaria_vesca FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000
malus_domestica MD02G1169200.v1.1 MD13G1230500.v1.1 MD15G1281700.v1.1 MD16G1009900.v1.1 MD16G1235300.v1.1
prunus_persica Prupe.1G056500_v2.0.a1 Prupe.1G056500_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1
pyrus_communis pycom02g13590 pycom13g20290 pycom15g24480 pycom16g00970 pycom16g19630
rosa_chinensis RchiOBHm_Chr4g0396591 RchiOBHm_Chr4g0445631
rosa_laevigata RLG00000005723 RLG00000009518
rosa_multiflora Rmu_co8031254.1_g000001 Rmu_co8351119.1_g000001 Rmu_sc0003637.1_g000024 Rmu_sc0010969.1_g000001 Rmu_sc0019383.1_g000002
rosa_roxburghii Rroxscaffold_5G00341440 Rroxscaffold_5G00386110
rosa_rugosa Rorug03G0348600 Rorug03G0348700 Rorug04G0363200 Rorug04G0363300 Rorug04G0363400 Rorug04G0363500
rosa_samantha Rh4AG070600 Rh4AG424700 Rh4AG425100 Rh4BG068500 Rh4BG436900 Rh4CG076300 Rh4CG451400 Rh4DG065600 Rh4DG433400
rosa_wichuraiana Rw4G005630 Rw4G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1512
Acc36I ACCTGC 1 cut(s) 809
AccB1I GGYRCC 3 cut(s) 4, 160, 193
AccB7I CCANNNNNTGG 2 cut(s) 1060, 1775
AccII CGCG 3 cut(s) 349, 853, 2139
AccIII TCCGGA 1 cut(s) 862
AclWI GGATC 5 cut(s) 667, 830, 991, 1337, 2633
AcoI YGGCCR 2 cut(s) 107, 2290
AcsI RAATTY 4 cut(s) 91, 427, 846, 2489
AcuI CTGAAG 5 cut(s) 627, 1101, 1476, 1827, 2561
AcyI GRCGYC 4 cut(s) 149, 161, 194, 497
AdeI CACNNNGTG 1 cut(s) 401
AfaI GTAC 5 cut(s) 313, 1498, 2135, 2276, 2581
AgsI TTSAA 7 cut(s) 97, 123, 1519, 1643, 1664, 1859, 2395
AjnI CCWGG 7 cut(s) 10, 25, 175, 397, 436, 2112, 2179
AjuI GAANNNNNNNTTGG 2 cut(s) 2286, 2318
AleI CACNNNNGTG 1 cut(s) 2282
Alw21I GWGCWC 1 cut(s) 986
Alw26I GTCTC 4 cut(s) 942, 1214, 1580, 2123
Alw44I GTGCAC 1 cut(s) 982
AlwI GGATC 5 cut(s) 667, 830, 991, 1337, 2633
AlwNI CAGNNNCTG 1 cut(s) 404
Ama87I CYCGRG 1 cut(s) 1286
Aor13HI TCCGGA 1 cut(s) 862
ApaI GGGCCC 1 cut(s) 547
ApaLI GTGCAC 1 cut(s) 982
ApeKI GCWGC 9 cut(s) 553, 607, 629, 963, 1412, 1534, 1697, 1709, 2109
ApoI RAATTY 4 cut(s) 91, 427, 846, 2489
ArsI GACNNNNNNTTYG 4 cut(s) 1275, 1307, 1673, 1705
Asp700I GAANNNNTTC 1 cut(s) 244
AspLEI GCGC 4 cut(s) 163, 196, 2157, 2269
AsuC2I CCSGG 2 cut(s) 237, 360
AsuHPI GGTGA 5 cut(s) 387, 426, 606, 1121, 1844
AvaI CYCGRG 1 cut(s) 1286
AvaII GGWCC 7 cut(s) 212, 515, 821, 1051, 1118, 1250, 1460
BaeGI GKGCMC 3 cut(s) 355, 547, 986
BalI TGGCCA 1 cut(s) 2292
BanI GGYRCC 3 cut(s) 4, 160, 193
BanII GRGCYC 4 cut(s) 547, 811, 1089, 1789
BarI GAAGNNNNNNTAC 4 cut(s) 1074, 1106, 1804, 1836
Bbv12I GWGCWC 1 cut(s) 986
BbvI GCAGC 9 cut(s) 565, 619, 641, 975, 1424, 1546, 1684, 1696, 2121
BccI CCATC 7 cut(s) 138, 361, 832, 1250, 1626, 1660, 1777
BceAI ACGGC 2 cut(s) 136, 2257
BcgI CGANNNNNNTGC 2 cut(s) 872, 906
BciT130I CCWGG 7 cut(s) 12, 27, 177, 399, 438, 2114, 2181
BciVI GTATCC 3 cut(s) 165, 1390, 2365
BclI TGATCA 1 cut(s) 1174
BcnI CCSGG 2 cut(s) 237, 360
BcoDI GTCTC 4 cut(s) 942, 1214, 1580, 2123
BfaI CTAG 9 cut(s) 21, 135, 171, 588, 732, 840, 1797, 2318, 2421
BfmI CTRYAG 7 cut(s) 289, 961, 1410, 1698, 2163, 2499, 2661
BfoI RGCGCY 2 cut(s) 164, 197
BfuAI ACCTGC 1 cut(s) 809
BfuI GTATCC 3 cut(s) 165, 1390, 2365
BglI GCCNNNNNGGC 3 cut(s) 13, 202, 815
BglII AGATCT 2 cut(s) 1995, 2040
Bme1390I CCNGG 9 cut(s) 12, 27, 177, 237, 360, 399, 438, 2114, 2181
Bme18I GGWCC 7 cut(s) 212, 515, 821, 1051, 1118, 1250, 1460
BmeT110I CYCGRG 1 cut(s) 1286
BmiI GGNNCC 9 cut(s) 6, 162, 195, 214, 372, 545, 546, 808, 1786
BmrFI CCNGG 9 cut(s) 12, 27, 177, 237, 360, 399, 438, 2114, 2181
BmrI ACTGGG 1 cut(s) 806
BmsI GCATC 9 cut(s) 494, 1023, 1261, 1533, 1656, 2085, 2096, 2472, 2673
BmuI ACTGGG 1 cut(s) 806
BpmI CTGGAG 7 cut(s) 366, 456, 579, 825, 1422, 1604, 1803
BpuEI CTTGAG 1 cut(s) 2061
BpuMI CCSGG 2 cut(s) 237, 360
BsaAI YACGTR 1 cut(s) 971
BsaBI GATNNNNATC 1 cut(s) 2590
BsaHI GRCGYC 4 cut(s) 149, 161, 194, 497
BsaI GGTCTC 1 cut(s) 2123
BsaWI WCCGGW 1 cut(s) 862
BsaXI ACNNNNNCTCC 4 cut(s) 328, 358, 798, 828
Bse118I RCCGGY 3 cut(s) 115, 196, 308
Bse1I ACTGG 8 cut(s) 383, 596, 808, 812, 958, 1405, 1786, 1990
Bse3DI GCAATG 4 cut(s) 534, 1135, 1728, 1896
Bse8I GATNNNNATC 1 cut(s) 2590
BseAI TCCGGA 1 cut(s) 862
BseBI CCWGG 7 cut(s) 12, 27, 177, 399, 438, 2114, 2181
BseGI GGATG 9 cut(s) 34, 130, 372, 1038, 1072, 1647, 1652, 2559, 2688
BseJI GATNNNNATC 1 cut(s) 2590
BseMI GCAATG 4 cut(s) 534, 1135, 1728, 1896
BseMII CTCAG 5 cut(s) 1602, 1698, 1893, 2259, 2390
BseNI ACTGG 8 cut(s) 383, 596, 808, 812, 958, 1405, 1786, 1990
BseRI GAGGAG 9 cut(s) 174, 177, 291, 366, 369, 459, 498, 906, 1569
BseSI GKGCMC 3 cut(s) 355, 547, 986
BseX3I CGGCCG 1 cut(s) 107
BseXI GCAGC 9 cut(s) 565, 619, 641, 975, 1424, 1546, 1684, 1696, 2121
BseYI CCCAGC 2 cut(s) 452, 476
Bsh1236I CGCG 3 cut(s) 349, 853, 2139
Bsh1285I CGRYCG 2 cut(s) 110, 359
BshNI GGYRCC 3 cut(s) 4, 160, 193
BsiEI CGRYCG 2 cut(s) 110, 359
BsiHKAI GWGCWC 1 cut(s) 986
BsiHKCI CYCGRG 1 cut(s) 1286
BsiSI CCGG 8 cut(s) 116, 158, 191, 197, 236, 309, 359, 863
BslFI GGGAC 1 cut(s) 1792
BsmAI GTCTC 4 cut(s) 942, 1214, 1580, 2123
BsmFI GGGAC 1 cut(s) 1792
BsmI GAATGC 5 cut(s) 750, 1393, 1712, 2157, 2469
Bso31I GGTCTC 1 cut(s) 2123
BsoBI CYCGRG 1 cut(s) 1286
Bsp120I GGGCCC 1 cut(s) 543
Bsp1286I GDGCHC 6 cut(s) 355, 547, 811, 986, 1089, 1789
Bsp13I TCCGGA 1 cut(s) 862
Bsp1407I TGTACA 1 cut(s) 2274
BspCNI CTCAG 5 cut(s) 1603, 1697, 1894, 2258, 2389
BspEI TCCGGA 1 cut(s) 862
BspFNI CGCG 3 cut(s) 349, 853, 2139
BspHI TCATGA 1 cut(s) 1161
BspLI GGNNCC 9 cut(s) 6, 162, 195, 214, 372, 545, 546, 808, 1786
BspMAI CTGCAG 3 cut(s) 965, 1414, 1702
BspMI ACCTGC 1 cut(s) 809
BspPI GGATC 5 cut(s) 667, 830, 991, 1337, 2633
BspQI GCTCTTC 1 cut(s) 1077
BspT107I GGYRCC 3 cut(s) 4, 160, 193
BspTNI GGTCTC 1 cut(s) 2123
BsrDI GCAATG 4 cut(s) 534, 1135, 1728, 1896
BsrFI RCCGGY 3 cut(s) 115, 196, 308
BsrGI TGTACA 1 cut(s) 2274
BsrI ACTGG 8 cut(s) 383, 596, 808, 812, 958, 1405, 1786, 1990
BssAI RCCGGY 3 cut(s) 115, 196, 308
BssNI GRCGYC 4 cut(s) 149, 161, 194, 497
BssT1I CCWWGG 4 cut(s) 668, 895, 1059, 1246
Bst2UI CCWGG 7 cut(s) 12, 27, 177, 399, 438, 2114, 2181
Bst4CI ACNGT 5 cut(s) 329, 1496, 2284, 2459, 2503
Bst6I CTCTTC 1 cut(s) 1077
BstACI GRCGYC 4 cut(s) 149, 161, 194, 497
BstAPI GCANNNNNTGC 1 cut(s) 1424
BstAUI TGTACA 1 cut(s) 2274
BstBAI YACGTR 1 cut(s) 971
BstDEI CTNAG 6 cut(s) 828, 1611, 1684, 1902, 2245, 2376
BstDSI CCRYGG 2 cut(s) 2137, 2678
BstEII GGTNACC 1 cut(s) 2209
BstENI CCTNNNNNAGG 1 cut(s) 396
BstF5I GGATG 9 cut(s) 34, 130, 372, 1038, 1072, 1647, 1652, 2559, 2688
BstFNI CGCG 3 cut(s) 349, 853, 2139
BstH2I RGCGCY 2 cut(s) 164, 197
BstHHI GCGC 4 cut(s) 163, 196, 2157, 2269
BstMAI GTCTC 4 cut(s) 942, 1214, 1580, 2123
BstMCI CGRYCG 2 cut(s) 110, 359
BstNI CCWGG 7 cut(s) 12, 27, 177, 399, 438, 2114, 2181
BstNSI RCATGY 3 cut(s) 572, 791, 1422
BstPI GGTNACC 1 cut(s) 2209
BstSCI CCNGG 9 cut(s) 10, 25, 175, 235, 358, 397, 436, 2112, 2179
BstSFI CTRYAG 7 cut(s) 289, 961, 1410, 1698, 2163, 2499, 2661
BstSLI GKGCMC 3 cut(s) 355, 547, 986
BstUI CGCG 3 cut(s) 349, 853, 2139
BstV1I GCAGC 9 cut(s) 565, 619, 641, 975, 1424, 1546, 1684, 1696, 2121
BstX2I RGATCY 3 cut(s) 996, 1995, 2040
BstYI RGATCY 3 cut(s) 996, 1995, 2040
BstZI CGGCCG 1 cut(s) 107
BsuI GTATCC 3 cut(s) 165, 1390, 2365
BtgI CCRYGG 2 cut(s) 2137, 2678
BtgZI GCGATG 1 cut(s) 2119
BtsCI GGATG 9 cut(s) 34, 130, 372, 1038, 1072, 1647, 1652, 2559, 2688
BtsI GCAGTG 7 cut(s) 589, 1005, 1237, 1422, 2031, 2097, 2649
BveI ACCTGC 1 cut(s) 809
CaiI CAGNNNCTG 1 cut(s) 404
CciI TCATGA 1 cut(s) 1161
CfoI GCGC 4 cut(s) 163, 196, 2157, 2269
Cfr10I RCCGGY 3 cut(s) 115, 196, 308
Cfr42I CCGCGG 1 cut(s) 2140
CseI GACGC 2 cut(s) 157, 505
CsiI ACCWGGT 2 cut(s) 25, 397
Csp6I GTAC 5 cut(s) 312, 1497, 2134, 2275, 2580
CspCI CAANNNNNGTGG 2 cut(s) 1186, 1221
CviQI GTAC 5 cut(s) 312, 1497, 2134, 2275, 2580
DdeI CTNAG 6 cut(s) 828, 1611, 1684, 1902, 2245, 2376
DinI GGCGCC 2 cut(s) 162, 195
DraIII CACNNNGTG 1 cut(s) 401
EaeI YGGCCR 2 cut(s) 107, 2290
EagI CGGCCG 1 cut(s) 107
Eam1104I CTCTTC 1 cut(s) 1077
EarI CTCTTC 1 cut(s) 1077
EciI GGCGGA 1 cut(s) 909
EclXI CGGCCG 1 cut(s) 107
Eco130I CCWWGG 4 cut(s) 668, 895, 1059, 1246
Eco147I AGGCCT 3 cut(s) 175, 244, 2074
Eco24I GRGCYC 4 cut(s) 547, 811, 1089, 1789
Eco31I GGTCTC 1 cut(s) 2123
Eco47I GGWCC 7 cut(s) 212, 515, 821, 1051, 1118, 1250, 1460
Eco52I CGGCCG 1 cut(s) 107
Eco57I CTGAAG 5 cut(s) 627, 1101, 1476, 1827, 2561
Eco88I CYCGRG 1 cut(s) 1286
Eco91I GGTNACC 1 cut(s) 2209
EcoNI CCTNNNNNAGG 1 cut(s) 396
EcoO109I RGGNCCY 3 cut(s) 371, 544, 1460
EcoO65I GGTNACC 1 cut(s) 2209
EcoRII CCWGG 7 cut(s) 10, 25, 175, 397, 436, 2112, 2179
EcoT14I CCWWGG 4 cut(s) 668, 895, 1059, 1246
EcoT22I ATGCAT 1 cut(s) 570
EcoT38I GRGCYC 4 cut(s) 547, 811, 1089, 1789
EgeI GGCGCC 2 cut(s) 162, 195
EheI GGCGCC 2 cut(s) 162, 195
ErhI CCWWGG 4 cut(s) 668, 895, 1059, 1246
FalI AAGNNNNNCTT 2 cut(s) 259, 291
FaqI GGGAC 1 cut(s) 1792
FauI CCCGC 3 cut(s) 261, 356, 2132
FbaI TGATCA 1 cut(s) 1174
FokI GGATG 9 cut(s) 21, 117, 379, 1045, 1059, 1634, 1639, 2546, 2695
FriOI GRGCYC 4 cut(s) 547, 811, 1089, 1789
FspBI CTAG 9 cut(s) 21, 135, 171, 588, 732, 840, 1797, 2318, 2421
GlaI GCGC 4 cut(s) 162, 195, 2156, 2268
GsaI CCCAGC 2 cut(s) 456, 480
GsuI CTGGAG 7 cut(s) 366, 456, 579, 825, 1422, 1604, 1803
HaeII RGCGCY 2 cut(s) 164, 197
HapII CCGG 8 cut(s) 116, 158, 191, 197, 236, 309, 359, 863
HgaI GACGC 2 cut(s) 157, 505
HhaI GCGC 4 cut(s) 163, 196, 2157, 2269
Hin1I GRCGYC 4 cut(s) 149, 161, 194, 497
Hin6I GCGC 4 cut(s) 161, 194, 2155, 2267
HinP1I GCGC 4 cut(s) 161, 194, 2155, 2267
HincII GTYRAC 4 cut(s) 55, 272, 2128, 2173
HindII GTYRAC 4 cut(s) 55, 272, 2128, 2173
HindIII AAGCTT 1 cut(s) 2543
HinfI GANTC 7 cut(s) 97, 866, 1222, 1682, 1880, 2189, 2302
HpaI GTTAAC 2 cut(s) 55, 2128
HpaII CCGG 8 cut(s) 116, 158, 191, 197, 236, 309, 359, 863
HphI GGTGA 5 cut(s) 387, 426, 606, 1121, 1844
Hpy166II GTNNAC 9 cut(s) 55, 272, 984, 1309, 1991, 2128, 2173, 2277, 2516
Hpy8I GTNNAC 9 cut(s) 55, 272, 984, 1309, 1991, 2128, 2173, 2277, 2516
Hpy99I CGWCG 1 cut(s) 151
HpyCH4III ACNGT 5 cut(s) 329, 1496, 2284, 2459, 2503
HpyCH4IV ACGT 4 cut(s) 460, 970, 1377, 1522
HpyF3I CTNAG 6 cut(s) 828, 1611, 1684, 1902, 2245, 2376
HpySE526I ACGT 4 cut(s) 460, 970, 1377, 1522
Hsp92I GRCGYC 4 cut(s) 149, 161, 194, 497
HspAI GCGC 4 cut(s) 161, 194, 2155, 2267
KasI GGCGCC 2 cut(s) 160, 193
Kpn2I TCCGGA 1 cut(s) 862
Ksp22I TGATCA 1 cut(s) 1174
KspAI GTTAAC 2 cut(s) 55, 2128
KspI CCGCGG 1 cut(s) 2140
LguI GCTCTTC 1 cut(s) 1077
LmnI GCTCC 5 cut(s) 536, 806, 1324, 1403, 1784
Lsp1109I GCAGC 9 cut(s) 565, 619, 641, 975, 1424, 1546, 1684, 1696, 2121
LweI GCATC 9 cut(s) 494, 1023, 1261, 1533, 1656, 2085, 2096, 2472, 2673
MabI ACCWGGT 2 cut(s) 25, 397
MaeI CTAG 9 cut(s) 21, 135, 171, 588, 732, 840, 1797, 2318, 2421
MaeII ACGT 4 cut(s) 460, 970, 1377, 1522
MaeIII GTNAC 4 cut(s) 1229, 2023, 2209, 2503
MboII GAAGA 6 cut(s) 1094, 1357, 1442, 1824, 2519, 2586
MflI RGATCY 3 cut(s) 996, 1995, 2040
MhlI GDGCHC 6 cut(s) 355, 547, 811, 986, 1089, 1789
MlsI TGGCCA 1 cut(s) 2292
MluNI TGGCCA 1 cut(s) 2292
Mly113I GGCGCC 2 cut(s) 161, 194
MlyI GAGTC 3 cut(s) 1216, 1676, 2183
MmeI TCCRAC 2 cut(s) 545, 1078
Mox20I TGGCCA 1 cut(s) 2292
Mph1103I ATGCAT 1 cut(s) 570
MroI TCCGGA 1 cut(s) 862
MroXI GAANNNNTTC 1 cut(s) 244
MscI TGGCCA 1 cut(s) 2292
MseI TTAA 6 cut(s) 54, 2055, 2127, 2312, 2570, 2703
MslI CAYNNNNRTG 2 cut(s) 2282, 2336
Msp20I TGGCCA 1 cut(s) 2292
MspA1I CMGCKG 5 cut(s) 476, 1679, 1865, 2139, 2363
MspI CCGG 8 cut(s) 116, 158, 191, 197, 236, 309, 359, 863
MspR9I CCNGG 9 cut(s) 12, 27, 177, 237, 360, 399, 438, 2114, 2181
Mva1269I GAATGC 5 cut(s) 750, 1393, 1712, 2157, 2469
MvaI CCWGG 7 cut(s) 12, 27, 177, 399, 438, 2114, 2181
MvnI CGCG 3 cut(s) 349, 853, 2139
NarI GGCGCC 2 cut(s) 161, 194
NciI CCSGG 2 cut(s) 237, 360
NlaIV GGNNCC 9 cut(s) 6, 162, 195, 214, 372, 545, 546, 808, 1786
NmuCI GTSAC 1 cut(s) 1229
NsiI ATGCAT 1 cut(s) 570
NspI RCATGY 3 cut(s) 572, 791, 1422
OliI CACNNNNGTG 1 cut(s) 2282
PaeI GCATGC 2 cut(s) 572, 1422
PagI TCATGA 1 cut(s) 1161
PceI AGGCCT 3 cut(s) 175, 244, 2074
PciSI GCTCTTC 1 cut(s) 1077
PctI GAATGC 5 cut(s) 750, 1393, 1712, 2157, 2469
PdmI GAANNNNTTC 1 cut(s) 244
PfeI GAWTC 4 cut(s) 97, 866, 1880, 2302
PflMI CCANNNNNTGG 2 cut(s) 1060, 1775
PfoI TCCNGGA 1 cut(s) 235
PleI GAGTC 3 cut(s) 1216, 1676, 2183
PluTI GGCGCC 2 cut(s) 164, 197
PpsI GAGTC 3 cut(s) 1216, 1676, 2183
Ppu21I YACGTR 1 cut(s) 971
PpuMI RGGWCCY 1 cut(s) 1460
PsiI TTATAA 1 cut(s) 1512
Psp5II RGGWCCY 1 cut(s) 1460
Psp6I CCWGG 7 cut(s) 10, 25, 175, 397, 436, 2112, 2179
PspEI GGTNACC 1 cut(s) 2209
PspFI CCCAGC 2 cut(s) 452, 476
PspGI CCWGG 7 cut(s) 10, 25, 175, 397, 436, 2112, 2179
PspN4I GGNNCC 9 cut(s) 6, 162, 195, 214, 372, 545, 546, 808, 1786
PspOMI GGGCCC 1 cut(s) 543
PspPPI RGGWCCY 1 cut(s) 1460
PstI CTGCAG 3 cut(s) 965, 1414, 1702
PstNI CAGNNNCTG 1 cut(s) 404
PsuI RGATCY 3 cut(s) 996, 1995, 2040
PvuII CAGCTG 4 cut(s) 476, 1679, 1865, 2363
RsaI GTAC 5 cut(s) 313, 1498, 2135, 2276, 2581
RsaNI GTAC 5 cut(s) 312, 1497, 2134, 2275, 2580
RseI CAYNNNNRTG 2 cut(s) 2282, 2336
SacII CCGCGG 1 cut(s) 2140
SapI GCTCTTC 1 cut(s) 1077
SaqAI TTAA 6 cut(s) 54, 2055, 2127, 2312, 2570, 2703
SchI GAGTC 3 cut(s) 1216, 1676, 2183
ScrFI CCNGG 9 cut(s) 12, 27, 177, 237, 360, 399, 438, 2114, 2181
SduI GDGCHC 6 cut(s) 355, 547, 811, 986, 1089, 1789
SexAI ACCWGGT 2 cut(s) 25, 397
SfaNI GCATC 9 cut(s) 494, 1023, 1261, 1533, 1656, 2085, 2096, 2472, 2673
SfcI CTRYAG 7 cut(s) 289, 961, 1410, 1698, 2163, 2499, 2661
SfoI GGCGCC 2 cut(s) 162, 195
Sfr303I CCGCGG 1 cut(s) 2140
SgrAI CRCCGGYG 1 cut(s) 196
SgrBI CCGCGG 1 cut(s) 2140
SinI GGWCC 7 cut(s) 212, 515, 821, 1051, 1118, 1250, 1460
SmiMI CAYNNNNRTG 2 cut(s) 2282, 2336
SmlI CTYRAG 1 cut(s) 2076
SmoI CTYRAG 1 cut(s) 2076
SphI GCATGC 2 cut(s) 572, 1422
SseBI AGGCCT 3 cut(s) 175, 244, 2074
SspDI GGCGCC 2 cut(s) 160, 193
SspI AATATT 1 cut(s) 2065
SspMI CTAG 9 cut(s) 21, 135, 171, 588, 732, 840, 1797, 2318, 2421
StuI AGGCCT 3 cut(s) 175, 244, 2074
StyD4I CCNGG 9 cut(s) 10, 25, 175, 235, 358, 397, 436, 2112, 2179
StyI CCWWGG 4 cut(s) 668, 895, 1059, 1246
TaaI ACNGT 5 cut(s) 329, 1496, 2284, 2459, 2503
TaiI ACGT 4 cut(s) 463, 973, 1380, 1525
TaqI TCGA 2 cut(s) 146, 2305
TatI WGTACW 3 cut(s) 1496, 2274, 2579
TauI GCSGC 6 cut(s) 112, 205, 424, 502, 505, 1418
TfiI GAWTC 4 cut(s) 97, 866, 1880, 2302
Tru1I TTAA 6 cut(s) 54, 2055, 2127, 2312, 2570, 2703
Tru9I TTAA 6 cut(s) 54, 2055, 2127, 2312, 2570, 2703
TseFI GTSAC 1 cut(s) 1229
TseI GCWGC 9 cut(s) 553, 607, 629, 963, 1412, 1534, 1697, 1709, 2109
Tsp45I GTSAC 1 cut(s) 1229
TspGWI ACGGA 3 cut(s) 862, 2429, 2695
Van91I CCANNNNNTGG 2 cut(s) 1060, 1775
VneI GTGCAC 1 cut(s) 982
VpaK11BI GGWCC 7 cut(s) 212, 515, 821, 1051, 1118, 1250, 1460
XagI CCTNNNNNAGG 1 cut(s) 396
XapI RAATTY 4 cut(s) 91, 427, 846, 2489
XceI RCATGY 3 cut(s) 572, 791, 1422
XcmI CCANNNNNNNNNTGG 2 cut(s) 1096, 1244
XmnI GAANNNNTTC 1 cut(s) 244
XspI CTAG 9 cut(s) 21, 135, 171, 588, 732, 840, 1797, 2318, 2421
Zsp2I ATGCAT 1 cut(s) 570
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.