Rorug04G0363500

Protein transport protein Sec24-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000554
Physical Location & Seq
Reverse (-)
53583625 .. 53588966
5342 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0363500.1

Sequence Viewer

Length: 2781 bp
ATGTGGTCTTCTACCACCACACTATGCCTCTGCTCCCTTCTCCTAGTTTTACTTCTCTGTTCCTCCGGTGCAAACTCTTACACCAACCCCAAGATCATCGGCAAAGGCTACCGTCTCATCTCCATTGAAGAAACCCCCGACGGCGGTATTCTCGGCCACCTCCAGCTCAAACAGAAGTCCAAAACCTACGGCCCCGACATCCCACTCTTACAGCTCTTTGTCAAGCACGAGACGGATCAACGGCTGAGGGTCCACATTACTGATGCTCAGAAGCAGCGGTGGGAGGTGCCGTACAACCTCTTACCCAGAGAGCAGCCTCCGTCGCTGAAGCAGACCATTGGGAGGTCAAAGGATCCCATAACAGTCTCCGAGTACTCAAGCTCGGAGCTCGTCTTCAGCTACACCGCAGACCCGTTCGGGTTTGTGGTGAAGCGAAAGTCAGACAAGCAAGTACTGTTCAACACCAGCTCAGATTCTTCAGACCCTTATGGGGAGATGGTGTTCAAGGACCAGTATCTTGAGATCTCCACAAAACTTCCCAAAGATGCATCCCTCTATGGGTTGGGAGAGAACTCCCAGCCCCATGGGATCAAGCTCTTCCCAAATGAACCTTATACCCTCTACACCACTGATGTCTCTGCTATCAATCTCAACACTGATTTGTATGGCTCCCACCCAGTTTACATGGATCTGAGGAATGTGGGTGGTGAGGCTTATGCTCATGCTGTTCTGTTGCTCAACAGTAATGGCATGGAGGTGTTTTACAGAGGCAATTCTTTGACATATAAGGTCATTGGGGGTGTCTTTGATTTCTACTTCTTTTCTGGGACTAGTCCACTGGCTGTGGTTGACCAGTACACTTCTTTCATTGGCAGACCAGCTCCAATGCCCTACTGGTCTCTAGGATTCCACCAATGCAGATGGGGTTACCACAATTTATCAGTGGTTGAAGATGTTGTTGCTAATTATGAAAAGGCTCAAATCCCTCTAGATGTCATGTGGACTGATGATGATCACATGGACGTGCGCAAAGACTTCACTCTCAGCGCCATGAACTTCCCCCGGCCAAAGCTTCTGGCATTCCTAGACAAAATTCATAAGATTGGCATGAAGTACGTTGTCATTGTCGATCCTGGAATTGGTGTTAATAGCACGTATGGTGTGTACCAAAGAGGTCTTGCTAATGATGTCTTCATCAAGTATGATAATGAACCTTACTTGGCCCAGGTTTGGCCAGGGGCTGTAAACTTCCCTGACTTTCTCAATCCAAAAACTGTTTCATGGTGGAGTGATGAGATCAAGCGCTTTCATGAACTTGTCCCTGTTGATGGGTTATGGATTGACATGAACGAGGCTTCAAATTTCTGTTCTGGGAAATGCACAATTCCAAAGGGGACGACGTGCCCTACTCCGGGTATACCTGGCTGGATATGTTGCTTGGATTGCAAGAACATTACAAAGACGAGATGGGATGATCCACCTTACAAGATAAATGCTTCAGGGTTGCAAGTCCCCTTAGGGTTCAAAACCATTGCCACTAGTGCATATCATTACAATGGCGTTTTGGAGTACGATGCTCACAGTCTGTATGGTTTTTCCCAAACCATTGCAACTCATCAAGGTCTTCAAGGGATTGCCGGCAAGAGGCCGTTCATATTAACCCGCTCCACTTATGTTGGTTCAGGCAAGTATGCTGCACATTGGACAGGTGATAATAAGGGAACTTGGGAGGATTTGAAGATATCAATCTCTACTGTCCTCAATTTTGGAATATTTGGGGTGCCGATGGTTGGCGCAGATATATGTGGCTTCTATCCAGCACCTACTGAAGAGCTTTGCAATCGTTGGATTGAAGTAGGTGCTTTCTACCCCTTTTCAAGGGATCATGCAAACTTCGCTTCCCCAAGGCAAGAGCTTTATCAGTGGGAGTCGGTAGCTGAGTCTGCTAGAAATGCTCTTGGTATGAGGTATAAGCTCCTTCCTTATCTCTACACTTTGACCTACGAAGCTCATATCACAGGAGCTCCAATTGCAAGGCCACTTTTCTTCTCATTCCCAACATATACTGAATGCTATGGCTTGAGTACTCAATTCTTGCTAGGGAGCGGTCTTCTGATCTCTCCAGTTGTTGAGGAAGGAAAATCTGAGGTTAAGGCATTGTTTCCCCCTGGAAGCTGGTACAGTTTATTTGATATGACACAGGCTGTTAATTCAAAGGGACAGTATGTTACACTTGATGCGCCTTTGCATGTAGTTAATGTACATTTGTATCAGAACATTATTCTACCAATGCAGCAGGGTGGAACCGTGTCTAAAGAAGCGAGAAAGACTCCTTTTAGCCTCGTAGTAACCTTCCCAGCTGGGGCAAGCAATGCAACAGCGAAGGGGAACATTTTCATTGATGATGATGAGCTTCCAGAAATGAAACTCGGAAGTGGCTACTCCACATATGTTGATCTCTATGCAACCGTAAGTCGAGGATATGTGAAAGTATGGTCAGAAGTTCAGGAGGGAAAATTTGCTATAGACCAAGGTTTGATTGTTGAGAAGGTGAGTGTGCTGGGATTGGATGGAACTGGAGGAGCATCAGCTCTTGAGGTTGATGGAACCACAGTGACAAGTGTTTCGAAGATAGAGCTGAGCACATTGGAGCAGGAGTACCAAGAGGAGGTGGAAGATGGAGAGAACAAGACCAAGAGTGTAATGGTCCAGGTCAATGGTCTATCACTTCCTGTGGGGAAGAACTTTGCCATGTCCTGGAAAATGAGTGCCAAAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

926

Amino Acids

102.97

Weight (kDa)

5.7

Isoelectric Point (pI)

34.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gal_mutarotas_2 PF13802 81 - 249 2.8e-11 Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain
Glyco_hydro_31_2nd PF01055 293 - 666 6.3e-120 Glycosyl hydrolases family 31 TIM-barrel domain
Glyco_hydro_31_3rd PF21365 674 - 762 6.1e-19 Glycosyl hydrolase family 31 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000554)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT4G32640 AT4G32640
fragaria_vesca FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000
malus_domestica MD02G1169200.v1.1 MD13G1230500.v1.1 MD15G1281700.v1.1 MD16G1009900.v1.1 MD16G1235300.v1.1
prunus_persica Prupe.1G056500_v2.0.a1 Prupe.1G056500_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1
pyrus_communis pycom02g13590 pycom13g20290 pycom15g24480 pycom16g00970 pycom16g19630
rosa_chinensis RchiOBHm_Chr4g0396591 RchiOBHm_Chr4g0445631
rosa_laevigata RLG00000005723 RLG00000009518
rosa_multiflora Rmu_co8031254.1_g000001 Rmu_co8351119.1_g000001 Rmu_sc0003637.1_g000024 Rmu_sc0010969.1_g000001 Rmu_sc0019383.1_g000002
rosa_roxburghii Rroxscaffold_5G00341440 Rroxscaffold_5G00386110
rosa_rugosa Rorug03G0348600 Rorug03G0348700 Rorug04G0363200 Rorug04G0363300 Rorug04G0363400 Rorug04G0363500
rosa_samantha Rh4AG070600 Rh4AG424700 Rh4AG425100 Rh4BG068500 Rh4BG436900 Rh4CG076300 Rh4CG451400 Rh4DG065600 Rh4DG433400
rosa_wichuraiana Rw4G005630 Rw4G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1028
AccB1I GGYRCC 2 cut(s) 286, 1780
AccB7I CCANNNNNTGG 1 cut(s) 2757
AccBSI CCGCTC 2 cut(s) 1665, 2106
AccI GTMKAC 1 cut(s) 1417
AciI CCGC 5 cut(s) 144, 277, 405, 1663, 2106
AclWI GGATC 8 cut(s) 243, 347, 360, 596, 696, 1124, 1469, 1890
AcoI YGGCCR 3 cut(s) 154, 1064, 1232
AcsI RAATTY 3 cut(s) 1092, 1360, 2516
AcuI CTGAAG 5 cut(s) 347, 379, 462, 1482, 1848
AfeI AGCGCT 1 cut(s) 1304
AhlI ACTAGT 2 cut(s) 830, 1538
AjiI CACGTC 2 cut(s) 1024, 1401
AjnI CCWGG 7 cut(s) 1132, 1224, 1234, 1420, 2167, 2709, 2756
AjuI GAANNNNNNNTTGG 2 cut(s) 1261, 1293
AloI GAACNNNNNNTCC 2 cut(s) 485, 517
Alw21I GWGCWC 3 cut(s) 390, 2026, 2645
Alw26I GTCTC 5 cut(s) 119, 224, 370, 640, 903
AlwI GGATC 8 cut(s) 243, 347, 360, 596, 696, 1124, 1469, 1890
AlwNI CAGNNNCTG 1 cut(s) 1241
Aor51HI AGCGCT 1 cut(s) 1304
AoxI GGCC 7 cut(s) 154, 190, 1064, 1221, 1232, 1646, 2036
ApeKI GCWGC 4 cut(s) 274, 313, 1694, 2293
ApoI RAATTY 3 cut(s) 1092, 1360, 2516
ArsI GACNNNNNNTTYG 2 cut(s) 2608, 2640
Asp700I GAANNNNTTC 1 cut(s) 2393
AspLEI GCGC 5 cut(s) 1029, 1049, 1305, 1796, 2242
AspS9I GGNCC 5 cut(s) 191, 250, 508, 1222, 2707
AsuC2I CCSGG 2 cut(s) 1063, 1413
AsuHPI GGTGA 4 cut(s) 439, 719, 1721, 2563
AsuII TTCGAA 1 cut(s) 2627
AvaII GGWCC 3 cut(s) 250, 508, 2707
AxyI CCTNAGG 1 cut(s) 1516
BaeGI GKGCMC 1 cut(s) 1406
BaeI ACNNNNGTAYC 2 cut(s) 2252, 2285
BalI TGGCCA 1 cut(s) 1234
BamHI GGATCC 1 cut(s) 352
BanI GGYRCC 2 cut(s) 286, 1780
BanII GRGCYC 2 cut(s) 390, 2026
BauI CACGAG 1 cut(s) 227
BbsI GAAGAC 4 cut(s) 385, 1183, 1616, 2102
Bbv12I GWGCWC 3 cut(s) 390, 2026, 2645
BbvCI CCTCAGC 1 cut(s) 245
BbvI GCAGC 4 cut(s) 286, 325, 1681, 2305
BccI CCATC 8 cut(s) 490, 915, 1322, 1461, 1780, 2564, 2597, 2672
BceAI ACGGC 5 cut(s) 157, 205, 257, 274, 1633
BciT130I CCWGG 7 cut(s) 1134, 1226, 1236, 1422, 2169, 2711, 2758
BclI TGATCA 1 cut(s) 1012
BcnI CCSGG 2 cut(s) 1063, 1413
BcoDI GTCTC 5 cut(s) 119, 224, 370, 640, 903
BcuI ACTAGT 2 cut(s) 830, 1538
BfaI CTAG 8 cut(s) 44, 831, 902, 989, 1085, 1539, 1947, 2099
BfmI CTRYAG 1 cut(s) 2523
BfoI RGCGCY 2 cut(s) 1050, 1306
BglII AGATCT 1 cut(s) 522
BisI GCNGC 4 cut(s) 275, 314, 1695, 2294
BlpI GCTNAGC 1 cut(s) 2639
BlsI GCNGC 4 cut(s) 276, 315, 1696, 2295
BmcAI AGTACT 3 cut(s) 374, 453, 2086
Bme1390I CCNGG 9 cut(s) 1063, 1134, 1226, 1236, 1413, 1422, 2169, 2711, 2758
Bme18I GGWCC 3 cut(s) 250, 508, 2707
BmgBI CACGTC 2 cut(s) 1024, 1401
BmgT120I GGNCC 5 cut(s) 191, 250, 508, 1222, 2707
BmiI GGNNCC 8 cut(s) 193, 251, 288, 354, 670, 1782, 2305, 2608
BmrFI CCNGG 9 cut(s) 1063, 1134, 1226, 1236, 1413, 1422, 2169, 2711, 2758
BmrI ACTGGG 1 cut(s) 671
BmsI GCATC 6 cut(s) 253, 535, 557, 1564, 2227, 2594
BmuI ACTGGG 1 cut(s) 671
BpiI GAAGAC 4 cut(s) 385, 1183, 1616, 2102
BplI GAGNNNNNCTC 2 cut(s) 2314, 2346
BpmI CTGGAG 3 cut(s) 146, 2106, 2598
Bpu10I CCTNAGC 1 cut(s) 245
Bpu1102I GCTNAGC 1 cut(s) 2639
Bpu14I TTCGAA 1 cut(s) 2627
BpuEI CTTGAG 4 cut(s) 361, 539, 2101, 2615
BpuMI CCSGG 2 cut(s) 1063, 1413
BsaAI YACGTR 1 cut(s) 1155
BsaBI GATNNNNATC 2 cut(s) 1011, 1745
BsaI GGTCTC 1 cut(s) 903
BsaJI CCNNGG 7 cut(s) 583, 1061, 1224, 1235, 1904, 2167, 2530
BsaWI WCCGGW 1 cut(s) 65
BsaXI ACNNNNNCTCC 8 cut(s) 275, 305, 485, 515, 2008, 2038, 2642, 2672
Bse118I RCCGGY 1 cut(s) 1637
Bse1I ACTGG 7 cut(s) 511, 677, 843, 853, 899, 2123, 2581
Bse21I CCTNAGG 1 cut(s) 1516
Bse3DI GCAATG 3 cut(s) 1530, 1605, 2377
Bse8I GATNNNNATC 2 cut(s) 1011, 1745
BseBI CCWGG 7 cut(s) 1134, 1226, 1236, 1422, 2169, 2711, 2758
BseDI CCNNGG 7 cut(s) 583, 1061, 1224, 1235, 1904, 2167, 2530
BseGI GGATG 4 cut(s) 198, 548, 1477, 2575
BseJI GATNNNNATC 2 cut(s) 1011, 1745
BseMI GCAATG 3 cut(s) 1530, 1605, 2377
BseMII CTCAG 8 cut(s) 236, 281, 483, 683, 1057, 1929, 2136, 2630
BseNI ACTGG 7 cut(s) 511, 677, 843, 853, 899, 2123, 2581
BseRI GAGGAG 2 cut(s) 2595, 2681
BseSI GKGCMC 1 cut(s) 1406
BseXI GCAGC 4 cut(s) 286, 325, 1681, 2305
BseYI CCCAGC 4 cut(s) 576, 2356, 2360, 2560
BsgI GTGCAG 1 cut(s) 1680
BshFI GGCC 7 cut(s) 156, 192, 1066, 1223, 1234, 1648, 2038
BshNI GGYRCC 2 cut(s) 286, 1780
BsiHKAI GWGCWC 3 cut(s) 390, 2026, 2645
BsiSI CCGG 4 cut(s) 66, 1063, 1412, 1638
BslFI GGGAC 5 cut(s) 841, 1304, 1408, 1496, 2232
BsmAI GTCTC 5 cut(s) 119, 224, 370, 640, 903
BsmBI CGTCTC 2 cut(s) 119, 224
BsmFI GGGAC 5 cut(s) 841, 1304, 1408, 1496, 2232
BsmI GAATGC 2 cut(s) 1079, 2075
BsnI GGCC 7 cut(s) 156, 192, 1066, 1223, 1234, 1648, 2038
Bso31I GGTCTC 1 cut(s) 903
Bsp119I TTCGAA 1 cut(s) 2627
Bsp1286I GDGCHC 4 cut(s) 390, 1406, 2026, 2645
Bsp1407I TGTACA 1 cut(s) 2260
Bsp1720I GCTNAGC 1 cut(s) 2639
Bsp19I CCATGG 1 cut(s) 583
BspACI CCGC 5 cut(s) 144, 277, 405, 1663, 2106
BspANI GGCC 7 cut(s) 156, 192, 1066, 1223, 1234, 1648, 2038
BspCNI CTCAG 8 cut(s) 237, 280, 482, 684, 1056, 1930, 2137, 2631
BspHI TCATGA 1 cut(s) 1309
BspLI GGNNCC 8 cut(s) 193, 251, 288, 354, 670, 1782, 2305, 2608
BspPI GGATC 8 cut(s) 243, 347, 360, 596, 696, 1124, 1469, 1890
BspQI GCTCTTC 2 cut(s) 602, 1824
BspT104I TTCGAA 1 cut(s) 2627
BspT107I GGYRCC 2 cut(s) 286, 1780
BspTNI GGTCTC 1 cut(s) 903
BsrBI CCGCTC 2 cut(s) 1665, 2106
BsrDI GCAATG 3 cut(s) 1530, 1605, 2377
BsrFI RCCGGY 1 cut(s) 1637
BsrGI TGTACA 1 cut(s) 2260
BsrI ACTGG 7 cut(s) 511, 677, 843, 853, 899, 2123, 2581
BssAI RCCGGY 1 cut(s) 1637
BssECI CCNNGG 7 cut(s) 583, 1061, 1224, 1235, 1904, 2167, 2530
BssNAI GTATAC 1 cut(s) 1418
BssSI CACGAG 1 cut(s) 227
BssT1I CCWWGG 3 cut(s) 583, 1904, 2530
Bst1107I GTATAC 1 cut(s) 1418
Bst2BI CACGAG 1 cut(s) 227
Bst2UI CCWGG 7 cut(s) 1134, 1226, 1236, 1422, 2169, 2711, 2758
Bst6I CTCTTC 2 cut(s) 602, 1824
BstAPI GCANNNNNTGC 1 cut(s) 2372
BstAUI TGTACA 1 cut(s) 2260
BstBAI YACGTR 1 cut(s) 1155
BstBI TTCGAA 1 cut(s) 2627
BstC8I GCNNGC 2 cut(s) 1639, 2368
BstDEI CTNAG 9 cut(s) 245, 267, 469, 692, 1043, 1516, 1938, 2145, 2639
BstDSI CCRYGG 1 cut(s) 583
BstEII GGTNACC 1 cut(s) 926
BstENI CCTNNNNNAGG 1 cut(s) 1876
BstF5I GGATG 4 cut(s) 198, 548, 1477, 2575
BstH2I RGCGCY 2 cut(s) 1050, 1306
BstHHI GCGC 5 cut(s) 1029, 1049, 1305, 1796, 2242
BstMAI GTCTC 5 cut(s) 119, 224, 370, 640, 903
BstMWI GCNNNNNNNGC 8 cut(s) 322, 1443, 1541, 1895, 1943, 1952, 2030, 2372
BstNI CCWGG 7 cut(s) 1134, 1226, 1236, 1422, 2169, 2711, 2758
BstNSI RCATGY 1 cut(s) 2252
BstPI GGTNACC 1 cut(s) 926
BstSCI CCNGG 9 cut(s) 1061, 1132, 1224, 1234, 1411, 1420, 2167, 2709, 2756
BstSFI CTRYAG 1 cut(s) 2523
BstSLI GKGCMC 1 cut(s) 1406
BstV1I GCAGC 4 cut(s) 286, 325, 1681, 2305
BstV2I GAAGAC 4 cut(s) 385, 1183, 1616, 2102
BstX2I RGATCY 3 cut(s) 352, 522, 688
BstXI CCANNNNNNTGG 2 cut(s) 584, 2717
BstYI RGATCY 3 cut(s) 352, 522, 688
BstZ17I GTATAC 1 cut(s) 1418
Bsu36I CCTNAGG 1 cut(s) 1516
BsuRI GGCC 7 cut(s) 156, 192, 1066, 1223, 1234, 1648, 2038
BtgI CCRYGG 1 cut(s) 583
BtrI CACGTC 2 cut(s) 1024, 1401
BtsCI GGATG 4 cut(s) 198, 548, 1477, 2575
BtsIMutI CAGTG 6 cut(s) 627, 654, 836, 948, 1928, 2619
Cac8I GCNNGC 2 cut(s) 1639, 2368
CaiI CAGNNNCTG 1 cut(s) 1241
CciI TCATGA 1 cut(s) 1309
CfoI GCGC 5 cut(s) 1029, 1049, 1305, 1796, 2242
Cfr10I RCCGGY 1 cut(s) 1637
Cfr13I GGNCC 5 cut(s) 191, 250, 508, 1222, 2707
CspCI CAANNNNNGTGG 4 cut(s) 1657, 1692, 2434, 2469
DdeI CTNAG 9 cut(s) 245, 267, 469, 692, 1043, 1516, 1938, 2145, 2639
EaeI YGGCCR 3 cut(s) 154, 1064, 1232
Eam1104I CTCTTC 2 cut(s) 602, 1824
EarI CTCTTC 2 cut(s) 602, 1824
Ecl136II GAGCTC 2 cut(s) 388, 2024
Eco130I CCWWGG 3 cut(s) 583, 1904, 2530
Eco24I GRGCYC 2 cut(s) 390, 2026
Eco31I GGTCTC 1 cut(s) 903
Eco32I GATATC 1 cut(s) 1743
Eco47I GGWCC 3 cut(s) 250, 508, 2707
Eco47III AGCGCT 1 cut(s) 1304
Eco53kI GAGCTC 2 cut(s) 388, 2024
Eco57I CTGAAG 5 cut(s) 347, 379, 462, 1482, 1848
Eco81I CCTNAGG 1 cut(s) 1516
Eco91I GGTNACC 1 cut(s) 926
EcoICRI GAGCTC 2 cut(s) 388, 2024
EcoNI CCTNNNNNAGG 1 cut(s) 1876
EcoO65I GGTNACC 1 cut(s) 926
EcoRII CCWGG 7 cut(s) 1132, 1224, 1234, 1420, 2167, 2709, 2756
EcoRV GATATC 1 cut(s) 1743
EcoT14I CCWWGG 3 cut(s) 583, 1904, 2530
EcoT22I ATGCAT 1 cut(s) 550
EcoT38I GRGCYC 2 cut(s) 390, 2026
ErhI CCWWGG 3 cut(s) 583, 1904, 2530
Esp3I CGTCTC 2 cut(s) 119, 224
FaqI GGGAC 5 cut(s) 841, 1304, 1408, 1496, 2232
FauI CCCGC 1 cut(s) 1670
FauNDI CATATG 1 cut(s) 2449
FbaI TGATCA 1 cut(s) 1012
FblI GTMKAC 1 cut(s) 1417
Fnu4HI GCNGC 4 cut(s) 275, 314, 1695, 2294
FokI GGATG 4 cut(s) 185, 535, 1484, 2582
FriOI GRGCYC 2 cut(s) 390, 2026
Fsp4HI GCNGC 4 cut(s) 275, 314, 1695, 2294
FspBI CTAG 8 cut(s) 44, 831, 902, 989, 1085, 1539, 1947, 2099
FspI TGCGCA 1 cut(s) 1028
GlaI GCGC 5 cut(s) 1028, 1048, 1304, 1795, 2241
GluI GCNGC 4 cut(s) 275, 314, 1695, 2294
GsaI CCCAGC 4 cut(s) 580, 2360, 2364, 2564
GsuI CTGGAG 3 cut(s) 146, 2106, 2598
HaeII RGCGCY 2 cut(s) 1050, 1306
HaeIII GGCC 7 cut(s) 156, 192, 1066, 1223, 1234, 1648, 2038
HapII CCGG 4 cut(s) 66, 1063, 1412, 1638
HhaI GCGC 5 cut(s) 1029, 1049, 1305, 1796, 2242
Hin6I GCGC 5 cut(s) 1027, 1047, 1303, 1794, 2240
HinP1I GCGC 5 cut(s) 1027, 1047, 1303, 1794, 2240
HincII GTYRAC 1 cut(s) 850
HindII GTYRAC 1 cut(s) 850
HindIII AAGCTT 1 cut(s) 1070
HinfI GANTC 5 cut(s) 473, 906, 1928, 1940, 2329
HpaII CCGG 4 cut(s) 66, 1063, 1412, 1638
HphI GGTGA 4 cut(s) 439, 719, 1721, 2563
Hpy166II GTNNAC 9 cut(s) 253, 682, 836, 850, 858, 1002, 1165, 1246, 1418
Hpy188III TCNNGA 6 cut(s) 518, 989, 1310, 2417, 2507, 2594
Hpy8I GTNNAC 9 cut(s) 253, 682, 836, 850, 858, 1002, 1165, 1246, 1418
Hpy99I CGWCG 3 cut(s) 143, 325, 1402
HpyAV CCTTC 6 cut(s) 47, 1988, 2129, 2362, 2377, 2542
HpyCH4IV ACGT 4 cut(s) 1023, 1116, 1154, 1400
HpyF10VI GCNNNNNNNGC 8 cut(s) 322, 1443, 1541, 1895, 1943, 1952, 2030, 2372
HpyF3I CTNAG 9 cut(s) 245, 267, 469, 692, 1043, 1516, 1938, 2145, 2639
HpySE526I ACGT 4 cut(s) 1023, 1116, 1154, 1400
HspAI GCGC 5 cut(s) 1027, 1047, 1303, 1794, 2240
KroI GCCGGC 1 cut(s) 1637
KroNI GCCGGC 1 cut(s) 1639
Ksp22I TGATCA 1 cut(s) 1012
LguI GCTCTTC 2 cut(s) 602, 1824
Lsp1109I GCAGC 4 cut(s) 286, 325, 1681, 2305
LweI GCATC 6 cut(s) 253, 535, 557, 1564, 2227, 2594
MaeI CTAG 8 cut(s) 44, 831, 902, 989, 1085, 1539, 1947, 2099
MaeII ACGT 4 cut(s) 1023, 1116, 1154, 1400
MaeIII GTNAC 4 cut(s) 926, 2227, 2347, 2614
MbiI CCGCTC 2 cut(s) 1665, 2106
MfeI CAATTG 1 cut(s) 2028
MflI RGATCY 3 cut(s) 352, 522, 688
MhlI GDGCHC 4 cut(s) 390, 1406, 2026, 2645
MlsI TGGCCA 1 cut(s) 1234
MluNI TGGCCA 1 cut(s) 1234
MlyI GAGTC 3 cut(s) 1937, 1949, 2323
MmeI TCCRAC 1 cut(s) 1826
Mox20I TGGCCA 1 cut(s) 1234
Mph1103I ATGCAT 1 cut(s) 550
MroNI GCCGGC 1 cut(s) 1637
MroXI GAANNNNTTC 1 cut(s) 2393
MscI TGGCCA 1 cut(s) 1234
MseI TTAA 5 cut(s) 1146, 1658, 2151, 2208, 2256
MslI CAYNNNNRTG 3 cut(s) 755, 1022, 1554
Msp20I TGGCCA 1 cut(s) 1234
MspA1I CMGCKG 2 cut(s) 277, 2360
MspI CCGG 4 cut(s) 66, 1063, 1412, 1638
MspR9I CCNGG 9 cut(s) 1063, 1134, 1226, 1236, 1413, 1422, 2169, 2711, 2758
MunI CAATTG 1 cut(s) 2028
Mva1269I GAATGC 2 cut(s) 1079, 2075
MvaI CCWGG 7 cut(s) 1134, 1226, 1236, 1422, 2169, 2711, 2758
MwoI GCNNNNNNNGC 8 cut(s) 322, 1443, 1541, 1895, 1943, 1952, 2030, 2372
NaeI GCCGGC 1 cut(s) 1639
NciI CCSGG 2 cut(s) 1063, 1413
NcoI CCATGG 1 cut(s) 583
NdeI CATATG 1 cut(s) 2449
NgoMIV GCCGGC 1 cut(s) 1637
NlaIV GGNNCC 8 cut(s) 193, 251, 288, 354, 670, 1782, 2305, 2608
NmeAIII GCCGAG 1 cut(s) 132
NmuCI GTSAC 1 cut(s) 2614
NsbI TGCGCA 1 cut(s) 1028
NsiI ATGCAT 1 cut(s) 550
NspI RCATGY 1 cut(s) 2252
NspV TTCGAA 1 cut(s) 2627
PagI TCATGA 1 cut(s) 1309
PciSI GCTCTTC 2 cut(s) 602, 1824
PctI GAATGC 2 cut(s) 1079, 2075
PdiI GCCGGC 1 cut(s) 1639
PdmI GAANNNNTTC 1 cut(s) 2393
PfeI GAWTC 2 cut(s) 473, 906
PflMI CCANNNNNTGG 1 cut(s) 2757
PfoI TCCNGGA 2 cut(s) 1132, 2756
PkrI GCNGC 4 cut(s) 276, 315, 1696, 2295
PleI GAGTC 3 cut(s) 1936, 1948, 2323
PpsI GAGTC 3 cut(s) 1936, 1948, 2323
Ppu21I YACGTR 1 cut(s) 1155
Psp124BI GAGCTC 2 cut(s) 390, 2026
Psp6I CCWGG 7 cut(s) 1132, 1224, 1234, 1420, 2167, 2709, 2756
PspEI GGTNACC 1 cut(s) 926
PspFI CCCAGC 4 cut(s) 576, 2356, 2360, 2560
PspGI CCWGG 7 cut(s) 1132, 1224, 1234, 1420, 2167, 2709, 2756
PspN4I GGNNCC 8 cut(s) 193, 251, 288, 354, 670, 1782, 2305, 2608
PspPI GGNCC 5 cut(s) 191, 250, 508, 1222, 2707
PstNI CAGNNNCTG 1 cut(s) 1241
PsuI RGATCY 3 cut(s) 352, 522, 688
PvuII CAGCTG 1 cut(s) 2360
RseI CAYNNNNRTG 3 cut(s) 755, 1022, 1554
SacI GAGCTC 2 cut(s) 390, 2026
SapI GCTCTTC 2 cut(s) 602, 1824
SaqAI TTAA 5 cut(s) 1146, 1658, 2151, 2208, 2256
SatI GCNGC 4 cut(s) 275, 314, 1695, 2294
Sau96I GGNCC 5 cut(s) 191, 250, 508, 1222, 2707
ScaI AGTACT 3 cut(s) 374, 453, 2086
SchI GAGTC 3 cut(s) 1937, 1949, 2323
ScrFI CCNGG 9 cut(s) 1063, 1134, 1226, 1236, 1413, 1422, 2169, 2711, 2758
SduI GDGCHC 4 cut(s) 390, 1406, 2026, 2645
SfaNI GCATC 6 cut(s) 253, 535, 557, 1564, 2227, 2594
SfcI CTRYAG 1 cut(s) 2523
SfuI TTCGAA 1 cut(s) 2627
SinI GGWCC 3 cut(s) 250, 508, 2707
SmiMI CAYNNNNRTG 3 cut(s) 755, 1022, 1554
SmlI CTYRAG 4 cut(s) 376, 518, 2080, 2594
SmoI CTYRAG 4 cut(s) 376, 518, 2080, 2594
SpeI ACTAGT 2 cut(s) 830, 1538
SsiI CCGC 5 cut(s) 144, 277, 405, 1663, 2106
SspI AATATT 1 cut(s) 1773
SspMI CTAG 8 cut(s) 44, 831, 902, 989, 1085, 1539, 1947, 2099
SstI GAGCTC 2 cut(s) 390, 2026
StyD4I CCNGG 9 cut(s) 1061, 1132, 1224, 1234, 1411, 1420, 2167, 2709, 2756
StyI CCWWGG 3 cut(s) 583, 1904, 2530
TaiI ACGT 4 cut(s) 1026, 1119, 1157, 1403
TaqI TCGA 3 cut(s) 1128, 2476, 2627
TatI WGTACW 5 cut(s) 372, 451, 855, 2084, 2260
TfiI GAWTC 2 cut(s) 473, 906
Tru1I TTAA 5 cut(s) 1146, 1658, 2151, 2208, 2256
Tru9I TTAA 5 cut(s) 1146, 1658, 2151, 2208, 2256
TscAI CASTG 6 cut(s) 634, 661, 843, 948, 1928, 2619
TseFI GTSAC 1 cut(s) 2614
TseI GCWGC 4 cut(s) 274, 313, 1694, 2293
Tsp45I GTSAC 1 cut(s) 2614
TspGWI ACGGA 2 cut(s) 248, 309
TspRI CASTG 6 cut(s) 634, 661, 843, 948, 1928, 2619
Van91I CCANNNNNTGG 1 cut(s) 2757
VpaK11BI GGWCC 3 cut(s) 250, 508, 2707
XagI CCTNNNNNAGG 1 cut(s) 1876
XapI RAATTY 3 cut(s) 1092, 1360, 2516
XbaI TCTAGA 1 cut(s) 988
XceI RCATGY 1 cut(s) 2252
XcmI CCANNNNNNNNNTGG 2 cut(s) 891, 2701
XmiI GTMKAC 1 cut(s) 1417
XmnI GAANNNNTTC 1 cut(s) 2393
XspI CTAG 8 cut(s) 44, 831, 902, 989, 1085, 1539, 1947, 2099
ZrmI AGTACT 3 cut(s) 374, 453, 2086
Zsp2I ATGCAT 1 cut(s) 550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.