Rw4G005630

Protein transport protein Sec24-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000554
Physical Location & Seq
Reverse (-)
11348186 .. 11362759
14574 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G005630.1

Sequence Viewer

Length: 2484 bp
ATGGCCAATGCAACAAGGGGTGGCTCAACCTCCACAATTTCCTGGGTCTGCTCCACCCCACAATTTCCTGGCTCTGCTCAACCACCTAGAATGTATGGAATGCCACCACAACCGCTGCCAAATCAGTCCATGACTACCATCTCATCGGCTGTTGGTCAAACTGGAACTCCTATGGCTGGGTCATCAAAGATTGATCCCAATCAAATTCCTCGGCCTGGACCAAGTTCTTCAGTACTTCTGCATGAAACTCGTCAGGCCAATCAAGCAAATCCACCTCCGCCTGCTACAAGTGATTATATCGTCAGAGACACTGGGAATTGCAGTCCACGTTACATGAGGTGCACCATCAATCAGATACCATGCACTGCTGATCTTTTGACAACATCAGGGATGCCGTTAGCTTTGTTGGTTGAACCTTTTGCCCTTCCTCATCCATCTGAGGAACCAATCCAAATTGTAGATTTTGGTGAAAGTGGCCCTGTTCGATGTTCTCGTTGCAAAGGCTACATAAATCCTTTCATGAGGTTCATAGACCAGGGCAGGCAATTCATCTGCAATTTGTGTGGATTTACTGATGAGACTCCCCGCGACTACCACTGCAATCTAGGTCCAGATGGCAGACGTAGAGATGCTGATGATCGGCCTGAGCTATGTAGGGGAACAGTTGAATTTGTTGCCTCAAAAGAATACATGGTGCGTGATCCCATGCCAGCTGTGTACTTCTTCCTTATCGATGTATCCATGAATGCCATTCAAACTGGTGCAACTGCTGCAGCTTGCAGCGCAATCAATCAAGTTATTGCTGATCTTCCTGAAGGTCCTCGGACAAGGGTGGGGATAGCGACATTTGACTCGACAATCCATTTTTACAATTTGAAACGTGCACTGCAGCAGCCTTTGATGCTTATTGTTCCTGATGTACAAGATGTTTACACTCCTCTAGAGACTGATGTAGTTGTTCAGCTTTCCGAGTGCCGTCAACATTTGGAGCAATTGCTGGAAAGTATTCCAACTATGTTTCAGAATAGTAAAACTGCTGAATCAGCTTTTGGTGCAGCAATCAAGGCTGCTTTCTTGGCAATAAAGAGTACTGGAGGGAAACTTTTGGTGTTTCAGTCAGTGTTGCCATCAACTGGAATTGGAGCGCTTTCAGCTAGAGAGGCTGAAGGAAGAGCTAATATATCTTCAGCTGAGAAGGAGCCCAATAAATTACTCCAGCCCGTGGACAAAACTTTAAAGACATTGGCAATTGAATTTGCTGAATATCAGGTTTGCGTTGATTTATTTATCACTACCCAGTCATACATAGATATTGCTTCTATCTCAGTCATCCCCAGAACAACCGGAGGGCAGGTTTACTATTATTATCCCTTCTCAGCTCTCTCTGATCCTGCAAAGCTATATAATGATCTTAGATGGAATGTCACAAGGCCGCAAGGTTTTGAGGCAGTGATGCGTGTAAGATGCAGCCAGGGTATTCAAGTTCAAGAGTACTTTGGAAACTTTTGCAAACGCATTCCAACAGATGTCGACCTACCTGGGATTGACTGTGACAAAACTATTATGGTAATGTTAAAGCATGATGACAAATTACAGGATGGCTCAGAATGTTCTTTCCAGTGTGCGGTTTTATACACAACTGTGTATGGCCAACGGAGAATTCGGGTTACCACTTTGTCTCTGCCATGCACTAGTATGCTAAGTAATCTGTTTCGCGCTGCTGATTTGGACACTCAGTTTTCATGTTACATGAAGCAAGCGGCAAATGAAATCACGTCAAGTCCCCTCTTGCGTGCACGGGAACAAATGACAAATCTTTGCATCAATAGTCTGCTTTCATACCGCAAATTCTGTGCTACTGTATCATCTTCGGGACAGCTTATTCTTCCAGAGGCACTGAAGCTCCTGCCTCTATACACCCTTGCATTAATCAAAAGTACCGGACTACGAACTGATGGAAAAATTGATGAGCGGTCTTTCTGGATCAACCATGTTTCCTCCCTGTCTGTACCTTTGGCAGTTCCACTGGTGTATCCCAGGATGGTGGCTGTCCATGACCTTGATGCTCAAAAGGAGGGTGATGGATCTCTTATTCCTCCGGTGATTCCACTTTCTAGCGAACACGTTCGTGATGATGGAATATATCTTCTTGAGAATGGTGAGGACTGTTTAATATACGTTGGGAACTCGGTGGATTCTGGAATTTTACAACAGCTGTTTGGCGTCACCACTGCTGATGAACTTCCTACTCAGTTCATGCTGCAGCAGTATGATAATTCATTATCAAAGAAGCTGAATGATGTGGTAAATGAAATACGCCGCCAGAGATGTTCCTACCTGCGATTGAAATTGTGCAAGAAAGGAGATCCTTCAGGAGCATTCTTCTTATCACATTTGGTTGAAGACCAGAGTCCCCATGGCCCCTCCTATGTTGAGTTTCTGGTACATGTCCATCGGCAAATACAGATAAAAATGACTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

827

Amino Acids

91.37

Weight (kDa)

5.98

Isoelectric Point (pI)

40.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-Sec23_Sec24 PF04810 160 - 198 2.4e-16 Sec23/Sec24 zinc finger
Sec23_trunk PF04811 235 - 475 2.3e-80 Sec23/Sec24 trunk domain
Sec23_BS PF08033 480 - 564 8.9e-28 Sec23/Sec24 beta-sandwich domain
Sec23_helical PF04815 575 - 673 4.1e-25 Sec23/Sec24 helical domain
Gelsolin PF00626 699 - 765 3.4e-08 Gelsolin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000554)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT4G32640 AT4G32640
fragaria_vesca FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000
malus_domestica MD02G1169200.v1.1 MD13G1230500.v1.1 MD15G1281700.v1.1 MD16G1009900.v1.1 MD16G1235300.v1.1
prunus_persica Prupe.1G056500_v2.0.a1 Prupe.1G056500_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1
pyrus_communis pycom02g13590 pycom13g20290 pycom15g24480 pycom16g00970 pycom16g19630
rosa_chinensis RchiOBHm_Chr4g0396591 RchiOBHm_Chr4g0445631
rosa_laevigata RLG00000005723 RLG00000009518
rosa_multiflora Rmu_co8031254.1_g000001 Rmu_co8351119.1_g000001 Rmu_sc0003637.1_g000024 Rmu_sc0010969.1_g000001 Rmu_sc0019383.1_g000002
rosa_roxburghii Rroxscaffold_5G00341440 Rroxscaffold_5G00386110
rosa_rugosa Rorug03G0348600 Rorug03G0348700 Rorug04G0363200 Rorug04G0363300 Rorug04G0363400 Rorug04G0363500
rosa_samantha Rh4AG070600 Rh4AG424700 Rh4AG425100 Rh4BG068500 Rh4BG436900 Rh4CG076300 Rh4CG451400 Rh4DG065600 Rh4DG433400
rosa_wichuraiana Rw4G005630 Rw4G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1342, 2346
AccB7I CCANNNNNTGG 2 cut(s) 1133, 1222
AccBSI CCGCTC 1 cut(s) 1972
AccI GTMKAC 1 cut(s) 1530
AccII CGCG 2 cut(s) 588, 1716
AciI CCGC 9 cut(s) 113, 278, 586, 1433, 1625, 1760, 1843, 1972, 2320
AclWI GGATC 6 cut(s) 188, 695, 1382, 1991, 2092, 2360
AcoI YGGCCR 2 cut(s) 3, 1648
AcsI RAATTY 6 cut(s) 204, 668, 1253, 1659, 1847, 2202
AcuI CTGAAG 6 cut(s) 213, 834, 1170, 1185, 1919, 2355
AcyI GRCGYC 1 cut(s) 2223
AfaI GTAC 8 cut(s) 234, 719, 921, 1090, 1493, 1939, 2010, 2445
AfeI AGCGCT 1 cut(s) 1146
AfiI CCNNNNNNNGG 5 cut(s) 176, 215, 1133, 1222, 1624
AflIII ACRYGT 2 cut(s) 2122, 2446
AgsI TTSAA 9 cut(s) 413, 668, 755, 877, 1253, 1481, 1487, 2347, 2402
AhlI ACTAGT 1 cut(s) 1691
AjiI CACGTC 1 cut(s) 1776
AjnI CCWGG 7 cut(s) 41, 67, 214, 534, 1470, 1537, 2036
AjuI GAANNNNNNNTTGG 4 cut(s) 1032, 1064, 1644, 1676
AleI CACNNNNGTG 2 cut(s) 1640, 2127
Alw21I GWGCWC 3 cut(s) 344, 886, 1798
Alw26I GTCTC 4 cut(s) 300, 572, 938, 1683
Alw44I GTGCAC 3 cut(s) 340, 882, 1794
AlwI GGATC 6 cut(s) 188, 695, 1382, 1991, 2092, 2360
Aor51HI AGCGCT 1 cut(s) 1146
AoxI GGCC 8 cut(s) 3, 212, 255, 475, 641, 1430, 1648, 2419
ApaLI GTGCAC 3 cut(s) 340, 882, 1794
ApoI RAATTY 6 cut(s) 204, 668, 1253, 1659, 1847, 2202
AseI ATTAAT 1 cut(s) 1928
Asp700I GAANNNNTTC 2 cut(s) 1005, 2124
AspLEI GCGC 3 cut(s) 785, 1147, 1718
AspS9I GGNCC 5 cut(s) 218, 476, 608, 818, 2420
AsuHPI GGTGA 5 cut(s) 479, 2090, 2113, 2171, 2218
AvaII GGWCC 3 cut(s) 218, 608, 818
BaeGI GKGCMC 3 cut(s) 344, 886, 1798
BaeI ACNNNNGTAYC 2 cut(s) 2015, 2048
BalI TGGCCA 2 cut(s) 5, 1650
BanII GRGCYC 1 cut(s) 1203
BbsI GAAGAC 1 cut(s) 2409
Bbv12I GWGCWC 3 cut(s) 344, 886, 1798
BceAI ACGGC 2 cut(s) 379, 960
BcgI CGANNNNNNTGC 2 cut(s) 230, 264
BciT130I CCWGG 7 cut(s) 43, 69, 216, 536, 1472, 1539, 2038
BciVI GTATCC 2 cut(s) 748, 2043
BcoDI GTCTC 4 cut(s) 300, 572, 938, 1683
BcuI ACTAGT 1 cut(s) 1691
BfaI CTAG 6 cut(s) 87, 605, 941, 1155, 1692, 2115
BfmI CTRYAG 3 cut(s) 771, 887, 2261
BfoI RGCGCY 1 cut(s) 1148
BfuAI ACCTGC 2 cut(s) 1342, 2346
BfuI GTATCC 2 cut(s) 748, 2043
BmcAI AGTACT 3 cut(s) 234, 1090, 1493
Bme1390I CCNGG 7 cut(s) 43, 69, 216, 536, 1472, 1539, 2038
Bme18I GGWCC 3 cut(s) 218, 608, 818
BmgBI CACGTC 1 cut(s) 1776
BmgT120I GGNCC 5 cut(s) 218, 476, 608, 818, 2420
BmiI GGNNCC 3 cut(s) 444, 1200, 2422
BmrFI CCNGG 7 cut(s) 43, 69, 216, 536, 1472, 1539, 2038
BmrI ACTGGG 2 cut(s) 321, 1291
BmsI GCATC 7 cut(s) 381, 619, 891, 1443, 1454, 1830, 2053
BmuI ACTGGG 2 cut(s) 321, 1291
BoxI GACNNNNGTC 1 cut(s) 2409
BpiI GAAGAC 1 cut(s) 2409
BpmI CTGGAG 2 cut(s) 1113, 1199
Bpu10I CCTNAGC 1 cut(s) 645
BpuEI CTTGAG 1 cut(s) 2171
Bsa29I ATCGAT 1 cut(s) 732
BsaBI GATNNNNATC 1 cut(s) 198
BsaHI GRCGYC 1 cut(s) 2223
BsaJI CCNNGG 9 cut(s) 42, 209, 535, 821, 1221, 1471, 1538, 2036, 2416
BsaWI WCCGGW 3 cut(s) 1343, 1940, 2098
BsaXI ACNNNNNCTCC 6 cut(s) 151, 181, 1338, 1368, 1887, 1917
Bsc4I CCNNNNNNNGG 5 cut(s) 176, 215, 1133, 1222, 1624
Bse1I ACTGG 8 cut(s) 166, 316, 763, 1096, 1138, 1297, 1618, 2031
Bse8I GATNNNNATC 1 cut(s) 198
BseBI CCWGG 7 cut(s) 43, 69, 216, 536, 1472, 1539, 2038
BseCI ATCGAT 1 cut(s) 732
BseDI CCNNGG 9 cut(s) 42, 209, 535, 821, 1221, 1471, 1538, 2036, 2416
BseGI GGATG 5 cut(s) 396, 430, 1329, 1603, 2046
BseJI GATNNNNATC 1 cut(s) 198
BseLI CCNNNNNNNGG 5 cut(s) 176, 215, 1133, 1222, 1624
BseMII CTCAG 8 cut(s) 429, 636, 1182, 1338, 1389, 1617, 1748, 2264
BseNI ACTGG 8 cut(s) 166, 316, 763, 1096, 1138, 1297, 1618, 2031
BseRI GAGGAG 1 cut(s) 927
BseSI GKGCMC 3 cut(s) 344, 886, 1798
BseYI CCCAGC 1 cut(s) 176
BsgI GTGCAG 1 cut(s) 1074
Bsh1236I CGCG 2 cut(s) 588, 1716
BshFI GGCC 8 cut(s) 5, 214, 257, 477, 643, 1432, 1650, 2421
BshVI ATCGAT 1 cut(s) 732
BsiHKAI GWGCWC 3 cut(s) 344, 886, 1798
BsiSI CCGG 3 cut(s) 1344, 1941, 2099
BslFI GGGAC 3 cut(s) 1767, 1887, 2397
BslI CCNNNNNNNGG 5 cut(s) 176, 215, 1133, 1222, 1624
BsmAI GTCTC 4 cut(s) 300, 572, 938, 1683
BsmFI GGGAC 3 cut(s) 1767, 1887, 2397
BsmI GAATGC 4 cut(s) 105, 751, 1515, 2378
BsnI GGCC 8 cut(s) 5, 214, 257, 477, 643, 1432, 1650, 2421
Bsp1286I GDGCHC 4 cut(s) 344, 886, 1203, 1798
Bsp1407I TGTACA 1 cut(s) 919
Bsp19I CCATGG 1 cut(s) 2416
BspACI CCGC 9 cut(s) 113, 278, 586, 1433, 1625, 1760, 1843, 1972, 2320
BspANI GGCC 8 cut(s) 5, 214, 257, 477, 643, 1432, 1650, 2421
BspCNI CTCAG 8 cut(s) 430, 637, 1183, 1337, 1388, 1616, 1747, 2263
BspDI ATCGAT 1 cut(s) 732
BspFNI CGCG 2 cut(s) 588, 1716
BspHI TCATGA 1 cut(s) 519
BspLI GGNNCC 3 cut(s) 444, 1200, 2422
BspMAI CTGCAG 3 cut(s) 775, 891, 2265
BspMI ACCTGC 2 cut(s) 1342, 2346
BspPI GGATC 6 cut(s) 188, 695, 1382, 1991, 2092, 2360
BspQI GCTCTTC 1 cut(s) 1165
BsrBI CCGCTC 1 cut(s) 1972
BsrGI TGTACA 1 cut(s) 919
BsrI ACTGG 8 cut(s) 166, 316, 763, 1096, 1138, 1297, 1618, 2031
BssECI CCNNGG 9 cut(s) 42, 209, 535, 821, 1221, 1471, 1538, 2036, 2416
BssNI GRCGYC 1 cut(s) 2223
BssT1I CCWWGG 1 cut(s) 2416
Bst2UI CCWGG 7 cut(s) 43, 69, 216, 536, 1472, 1539, 2038
Bst4CI ACNGT 5 cut(s) 664, 1550, 1642, 1861, 2168
Bst6I CTCTTC 1 cut(s) 1165
BstACI GRCGYC 1 cut(s) 2223
BstAPI GCANNNNNTGC 1 cut(s) 770
BstAUI TGTACA 1 cut(s) 919
BstC8I GCNNGC 6 cut(s) 282, 542, 711, 778, 1758, 1794
BstDSI CCRYGG 2 cut(s) 1221, 2416
BstEII GGTNACC 1 cut(s) 1666
BstF5I GGATG 5 cut(s) 396, 430, 1329, 1603, 2046
BstFNI CGCG 2 cut(s) 588, 1716
BstH2I RGCGCY 1 cut(s) 1148
BstHHI GCGC 3 cut(s) 785, 1147, 1718
BstMAI GTCTC 4 cut(s) 300, 572, 938, 1683
BstNI CCWGG 7 cut(s) 43, 69, 216, 536, 1472, 1539, 2038
BstNSI RCATGY 1 cut(s) 2450
BstPAI GACNNNNGTC 1 cut(s) 2409
BstPI GGTNACC 1 cut(s) 1666
BstSCI CCNGG 7 cut(s) 41, 67, 214, 534, 1470, 1537, 2036
BstSFI CTRYAG 3 cut(s) 771, 887, 2261
BstSLI GKGCMC 3 cut(s) 344, 886, 1798
BstUI CGCG 2 cut(s) 588, 1716
BstV2I GAAGAC 1 cut(s) 2409
BstX2I RGATCY 2 cut(s) 2084, 2365
BstXI CCANNNNNNTGG 1 cut(s) 2044
BstYI RGATCY 2 cut(s) 2084, 2365
Bsu15I ATCGAT 1 cut(s) 732
BsuI GTATCC 2 cut(s) 748, 2043
BsuRI GGCC 8 cut(s) 5, 214, 257, 477, 643, 1432, 1650, 2421
BsuTUI ATCGAT 1 cut(s) 732
BtgI CCRYGG 2 cut(s) 1221, 2416
BtrI CACGTC 1 cut(s) 1776
BtsCI GGATG 5 cut(s) 396, 430, 1329, 1603, 2046
BtsI GCAGTG 5 cut(s) 363, 595, 884, 1455, 2229
BveI ACCTGC 2 cut(s) 1342, 2346
Cac8I GCNNGC 6 cut(s) 282, 542, 711, 778, 1758, 1794
CciI TCATGA 1 cut(s) 519
CfoI GCGC 3 cut(s) 785, 1147, 1718
Cfr13I GGNCC 5 cut(s) 218, 476, 608, 818, 2420
ClaI ATCGAT 1 cut(s) 732
CseI GACGC 1 cut(s) 2212
Csp6I GTAC 8 cut(s) 233, 718, 920, 1089, 1492, 1938, 2009, 2444
CspCI CAANNNNNGTGG 2 cut(s) 544, 579
CviQI GTAC 8 cut(s) 233, 718, 920, 1089, 1492, 1938, 2009, 2444
DraI TTTAAA 1 cut(s) 1236
EaeI YGGCCR 2 cut(s) 3, 1648
Eam1104I CTCTTC 1 cut(s) 1165
EarI CTCTTC 1 cut(s) 1165
EciI GGCGGA 1 cut(s) 267
Eco130I CCWWGG 1 cut(s) 2416
Eco24I GRGCYC 1 cut(s) 1203
Eco47I GGWCC 3 cut(s) 218, 608, 818
Eco47III AGCGCT 1 cut(s) 1146
Eco57I CTGAAG 6 cut(s) 213, 834, 1170, 1185, 1919, 2355
Eco91I GGTNACC 1 cut(s) 1666
EcoO109I RGGNCCY 1 cut(s) 818
EcoO65I GGTNACC 1 cut(s) 1666
EcoRI GAATTC 1 cut(s) 1659
EcoRII CCWGG 7 cut(s) 41, 67, 214, 534, 1470, 1537, 2036
EcoT14I CCWWGG 1 cut(s) 2416
EcoT38I GRGCYC 1 cut(s) 1203
ErhI CCWWGG 1 cut(s) 2416
FaqI GGGAC 3 cut(s) 1767, 1887, 2397
FauI CCCGC 1 cut(s) 593
FblI GTMKAC 1 cut(s) 1530
FokI GGATG 5 cut(s) 403, 417, 1316, 1610, 2053
FriOI GRGCYC 1 cut(s) 1203
FspBI CTAG 6 cut(s) 87, 605, 941, 1155, 1692, 2115
GlaI GCGC 3 cut(s) 784, 1146, 1717
GsaI CCCAGC 1 cut(s) 180
GsuI CTGGAG 2 cut(s) 1113, 1199
HaeII RGCGCY 1 cut(s) 1148
HaeIII GGCC 8 cut(s) 5, 214, 257, 477, 643, 1432, 1650, 2421
HapII CCGG 3 cut(s) 1344, 1941, 2099
HgaI GACGC 1 cut(s) 2212
HhaI GCGC 3 cut(s) 785, 1147, 1718
Hin1I GRCGYC 1 cut(s) 2223
Hin6I GCGC 3 cut(s) 783, 1145, 1716
HinP1I GCGC 3 cut(s) 783, 1145, 1716
HincII GTYRAC 2 cut(s) 980, 1531
HindII GTYRAC 2 cut(s) 980, 1531
HinfI GANTC 6 cut(s) 580, 851, 1040, 2104, 2195, 2410
HpaII CCGG 3 cut(s) 1344, 1941, 2099
HphI GGTGA 5 cut(s) 479, 2090, 2113, 2171, 2218
Hpy188I TCNGA 8 cut(s) 305, 354, 439, 825, 970, 1023, 1387, 1606
HpyAV CCTTC 6 cut(s) 434, 809, 1160, 1189, 1381, 2379
HpyCH4III ACNGT 5 cut(s) 664, 1550, 1642, 1861, 2168
HpyCH4IV ACGT 6 cut(s) 328, 622, 880, 1775, 2124, 2178
HpySE526I ACGT 6 cut(s) 328, 622, 880, 1775, 2124, 2178
Hsp92I GRCGYC 1 cut(s) 2223
HspAI GCGC 3 cut(s) 783, 1145, 1716
LguI GCTCTTC 1 cut(s) 1165
LmnI GCTCC 6 cut(s) 56, 988, 1142, 1198, 1908, 2375
LweI GCATC 7 cut(s) 381, 619, 891, 1443, 1454, 1830, 2053
MaeI CTAG 6 cut(s) 87, 605, 941, 1155, 1692, 2115
MaeII ACGT 6 cut(s) 328, 622, 880, 1775, 2124, 2178
MaeIII GTNAC 6 cut(s) 329, 1423, 1550, 1666, 1745, 2224
MbiI CCGCTC 1 cut(s) 1972
MfeI CAATTG 2 cut(s) 992, 1248
MflI RGATCY 2 cut(s) 2084, 2365
MhlI GDGCHC 4 cut(s) 344, 886, 1203, 1798
MlsI TGGCCA 2 cut(s) 5, 1650
MluNI TGGCCA 2 cut(s) 5, 1650
MlyI GAGTC 3 cut(s) 574, 845, 2419
MmeI TCCRAC 2 cut(s) 1034, 1544
Mox20I TGGCCA 2 cut(s) 5, 1650
MroXI GAANNNNTTC 2 cut(s) 1005, 2124
MscI TGGCCA 2 cut(s) 5, 1650
MseI TTAA 4 cut(s) 1235, 1574, 1928, 2171
MslI CAYNNNNRTG 3 cut(s) 1640, 1694, 2127
Msp20I TGGCCA 2 cut(s) 5, 1650
MspA1I CMGCKG 4 cut(s) 115, 713, 1190, 2215
MspI CCGG 3 cut(s) 1344, 1941, 2099
MspR9I CCNGG 7 cut(s) 43, 69, 216, 536, 1472, 1539, 2038
MunI CAATTG 2 cut(s) 992, 1248
Mva1269I GAATGC 4 cut(s) 105, 751, 1515, 2378
MvaI CCWGG 7 cut(s) 43, 69, 216, 536, 1472, 1539, 2038
MvnI CGCG 2 cut(s) 588, 1716
NcoI CCATGG 1 cut(s) 2416
NlaIV GGNNCC 3 cut(s) 444, 1200, 2422
NmeAIII GCCGAG 1 cut(s) 190
NmuCI GTSAC 3 cut(s) 1423, 1550, 2224
NspI RCATGY 1 cut(s) 2450
OliI CACNNNNGTG 2 cut(s) 1640, 2127
PagI TCATGA 1 cut(s) 519
PciI ACATGT 1 cut(s) 2446
PciSI GCTCTTC 1 cut(s) 1165
PcsI WCGNNNNNNNCGW 1 cut(s) 490
PctI GAATGC 4 cut(s) 105, 751, 1515, 2378
PdmI GAANNNNTTC 2 cut(s) 1005, 2124
PfeI GAWTC 3 cut(s) 1040, 2104, 2195
PflMI CCANNNNNTGG 2 cut(s) 1133, 1222
PleI GAGTC 3 cut(s) 574, 845, 2418
PpsI GAGTC 3 cut(s) 574, 845, 2418
PpuMI RGGWCCY 1 cut(s) 818
PscI ACATGT 1 cut(s) 2446
PshAI GACNNNNGTC 1 cut(s) 2409
PshBI ATTAAT 1 cut(s) 1928
Psp5II RGGWCCY 1 cut(s) 818
Psp6I CCWGG 7 cut(s) 41, 67, 214, 534, 1470, 1537, 2036
PspEI GGTNACC 1 cut(s) 1666
PspFI CCCAGC 1 cut(s) 176
PspGI CCWGG 7 cut(s) 41, 67, 214, 534, 1470, 1537, 2036
PspN4I GGNNCC 3 cut(s) 444, 1200, 2422
PspPI GGNCC 5 cut(s) 218, 476, 608, 818, 2420
PspPPI RGGWCCY 1 cut(s) 818
PstI CTGCAG 3 cut(s) 775, 891, 2265
PsuI RGATCY 2 cut(s) 2084, 2365
PvuII CAGCTG 3 cut(s) 713, 1190, 2215
RsaI GTAC 8 cut(s) 234, 719, 921, 1090, 1493, 1939, 2010, 2445
RsaNI GTAC 8 cut(s) 233, 718, 920, 1089, 1492, 1938, 2009, 2444
RseI CAYNNNNRTG 3 cut(s) 1640, 1694, 2127
SalI GTCGAC 1 cut(s) 1529
SapI GCTCTTC 1 cut(s) 1165
SaqAI TTAA 4 cut(s) 1235, 1574, 1928, 2171
Sau96I GGNCC 5 cut(s) 218, 476, 608, 818, 2420
ScaI AGTACT 3 cut(s) 234, 1090, 1493
SchI GAGTC 3 cut(s) 574, 845, 2419
ScrFI CCNGG 7 cut(s) 43, 69, 216, 536, 1472, 1539, 2038
SduI GDGCHC 4 cut(s) 344, 886, 1203, 1798
SfaNI GCATC 7 cut(s) 381, 619, 891, 1443, 1454, 1830, 2053
SfcI CTRYAG 3 cut(s) 771, 887, 2261
SinI GGWCC 3 cut(s) 218, 608, 818
SmiMI CAYNNNNRTG 3 cut(s) 1640, 1694, 2127
SmlI CTYRAG 1 cut(s) 2150
SmoI CTYRAG 1 cut(s) 2150
SpeI ACTAGT 1 cut(s) 1691
SsiI CCGC 9 cut(s) 113, 278, 586, 1433, 1625, 1760, 1843, 1972, 2320
SspMI CTAG 6 cut(s) 87, 605, 941, 1155, 1692, 2115
StyD4I CCNGG 7 cut(s) 41, 67, 214, 534, 1470, 1537, 2036
StyI CCWWGG 1 cut(s) 2416
TaaI ACNGT 5 cut(s) 664, 1550, 1642, 1861, 2168
TaiI ACGT 6 cut(s) 331, 625, 883, 1778, 2127, 2181
TaqI TCGA 4 cut(s) 484, 732, 854, 1530
TatI WGTACW 5 cut(s) 232, 717, 919, 1088, 1491
TauI GCSGC 3 cut(s) 1435, 1763, 2322
TfiI GAWTC 3 cut(s) 1040, 2104, 2195
Tru1I TTAA 4 cut(s) 1235, 1574, 1928, 2171
Tru9I TTAA 4 cut(s) 1235, 1574, 1928, 2171
TseFI GTSAC 3 cut(s) 1423, 1550, 2224
Tsp45I GTSAC 3 cut(s) 1423, 1550, 2224
TspGWI ACGGA 1 cut(s) 1669
Van91I CCANNNNNTGG 2 cut(s) 1133, 1222
VneI GTGCAC 3 cut(s) 340, 882, 1794
VpaK11BI GGWCC 3 cut(s) 218, 608, 818
VspI ATTAAT 1 cut(s) 1928
XapI RAATTY 6 cut(s) 204, 668, 1253, 1659, 1847, 2202
XbaI TCTAGA 1 cut(s) 940
XceI RCATGY 1 cut(s) 2450
XcmI CCANNNNNNNNNTGG 1 cut(s) 2414
XmiI GTMKAC 1 cut(s) 1530
XmnI GAANNNNTTC 2 cut(s) 1005, 2124
XspI CTAG 6 cut(s) 87, 605, 941, 1155, 1692, 2115
ZrmI AGTACT 3 cut(s) 234, 1090, 1493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.