pycom16g00970

Protein transport protein Sec24-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0000554
Physical Location & Seq
Forward (+)
580749 .. 587802
7054 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g00970.21

Sequence Viewer

Length: 3027 bp
ATGGCGGCTCAAGGGCCACTCCGACCCGGTAATCGTCCACCGCCCCCTAATTACAACCCTAACCCAAATCATATAATTCCTCCCCCAAATTCCGATTCTTTGTCGGACAATTTGCACAATTTGAATCTCAATCGACCGCCTTCGAAGCCCACCTCTGCCCCAAGACCTTCACCTCATTCCCAACCACCGCCTTCAGCACCGCCGGGCCCATTTTCTCGGACTGCGCAGTCCAGACCTTTACCGGGTCCCCCTCCAGTGGGACCCCCCTCCTCGTTTCCACCGTACGTGGGCCCGTCAAGGTCTTTCGGGCCTCCTGTAACTTCACCACTTGGCAACAGACCGCCTCCTCCCAATGCTTTCCCGCCGGCATCCCCACCAGGTGTTTTTCTCGGCGGGCCCCGTTTTCCTCCACCTGTTGGCGGGACTGGACCTTCGGCAACAATGGCGGCAGCTCGAGCACCACATCCTCCTCATCAGCCTCAGCCTCCGCCAACCATGCATTCTGTATTGGGCAGTTCAGTGGGCAGAGCGCCTCCAGGTCCACCCGTGCAGCCGCCGCAACCAGTTTCTCAACCTCCAGAAACGTGGTCCATGCATAATCAAGCACCGCAGCTGCCGCCAGCTTCAGCGTCTGTGCAACCACCAAGAATGTTTGGCATGCCACCACCGTTGCCAAACCAATCCATGACTGCCATATCACATGCTGTGGGGCAAACTGGAGCTCCGGTGGCAGGACCGTCAAAGATTGATCCGAACCAAATACCACGACCTATTCCAAGTTCCTCAGTGGTTGTGTATGAAACTCGTCAGGGCAATCAAACAAACCCTCCTCCGCCTTCTACGAGTGATTACATTGTCAGAGACACTGGGAACTGCAGTCCACGCAATCTGAGGTGCACCATTAATCAGGTTCCATGTACTGCTGACCTTTTGGCGACATCGGGAATGCAGTTGGCTTTGCTGCTCCAACCCTTGGCCCTTCCTCATCCATCTGAAGAGCCTATACAAGTTGTGGATTTTGGTGAAAGTGGTCCTGTTCGTTGTTCTCGTTGCAAAGGCTACATAAACCCTTCCATGAAGTTCATTGATCAGGGCAGGAAGTTCATCTGTAGCTTGTGTGGATTTAGTGATGAGACGCCCCATGACTACCACTGCAATCTTGGTCCAGATGGTAGGCGTAGAGATGCTGACGATAGGCCTGAGCTTTGTAAAGGAATGGTTGAATTTGTTGCTTCAAAAGAGTACATGGTGCGTGATCCAATGCTGGCTGTGTATTTCTTCCTTATTGATGTATCTATGATTGCTATGCAAACTGGAGCAACTGCAGCGGCATGCAGTGCAATCAGTCAAGTTATTTCTGATCTTCCTGAAGGCCCTAGGACTATGGTGGGAATTGCAACATTTGACACTACAATTCATTTTTACAATTTGAAACGTTCATTACAGCAGCCACTGATGCTCATTGTTCCTGATGTACAAGATGTTTATACTCCTCTGCAGACTGATGTAATTGTACAGATTTCTGAGTGCCGTCAACATTTAGAACTACTTTTGGAAAGCATCCCATCCATGTTTCAAGATAATAAAACAGCTGACTCAGCTTTTGGTGCCGCAGTCAAGGCTGCATTCTTGGCAATGAAAAGTAATGGAGGAAAACTTTTGGTATTTCAGTCAGTCTTGCCATCAATTGGAATTGGAGCCCTTTCAGCTAGAGAGGCTGAAGGAAGAACTAATAGCTCTGCGGGGGAGAAGGAGGTACATAAATTGCTTCAACCAGCTGACAAGATTTTAGAAACAATGGCAACGGAACTTGCTGAGTATCAGGTCTGCGTTGATATTTTTTTAACCACCCAGGCATACATAGACATAGCTTCTATGTCTGTCATCCCAAGAATCACTGGTGGCCAGGTCTATTATTATTACCCTTTCTCTGCGGTTGCTGACGCTGCAAAGATCTACAATGACCTTAGATGGAATGTCACACGGCCTCAAGGTTTTGAGGCAGTGATGCGTGTGAGATGCAGCCAGGGTCTCCAAGTTCAAGAGTACCATGGGAACTTCTGCAAGCACGTTCCTACTGATGTTGACCTACCCAGTATTGACTGTGACAAAACTATAATGGTAACCATAAAATACGATGATAAGTTGCAGGATGGCTCAGAATGTGTGTTTCAGTGTGCGCTTCTATACACCACTGTGTACGGTCAAAGAAGAATTCGAGTTACAACTTTAGCTCTGCCATGTACAAGTATGCTGAATAATCTTTTCCGTACAGCTGACTTGGATACCCAGTTTGCTTGTATATTGAAACAAGCGGCAATTGAAATTCCTTCTCGCCCACTCATGCAAGTCCGTGAAAGACTGACTGACCATTGCATCAACATTCTGTGTTCTTATAGGAAATTTTGTGCTACAGTTTCATCATCTGGACAACTTGTTCTTCCGGAAACACTTAAGCTCCTACCGTTGTACATCCTCGCACTAACTAAAAGCACAGGATTGCGAGCTGCGGGGAAATTAGATGAACGATCTTACTGGATCAATTATGTGTCCTCTGTTTCTACTCCTTTAGCAATAGCACTTGTGTATCCTCGGATGGTGGCAATCCATGATTTTATTTCCAAGACGGATCGATCAATTGTTCCTCCTGCGATTCCACTTTCTAGTGAGCATATCAACGATGAGGGAATTTATCTTCTTGAGAATGGAGAGGATTGTCCAATATATATTGGCAGCTCGGTAGATCCAGATATCTTGAACAAGTTGTTCGGTATTTCTTCAGTTGATGAAATTCCTGCTCAGTTTGTGCTGCAGCAGTATGATAATCCATTTTCAGCTAAGCTAAATGACGTGGTAAATGAGATTCGACGCCAAAGATGTTCCTACCTCCGCTTGAAATTATGCAAGAAAGGAGATCCATCAGGGATGCTCTTCTTCTCATATATCGTCGAAGATAAAAATTTGAATGGCCTCTCCTATATCGAGTTTCTAATACATATCCATCGGCAGATTCAAATGAAAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

1009

Amino Acids

110.01

Weight (kDa)

7.24

Isoelectric Point (pI)

53.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000554)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT4G32640 AT4G32640
fragaria_vesca FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000
malus_domestica MD02G1169200.v1.1 MD13G1230500.v1.1 MD15G1281700.v1.1 MD16G1009900.v1.1 MD16G1235300.v1.1
prunus_persica Prupe.1G056500_v2.0.a1 Prupe.1G056500_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1
pyrus_communis pycom02g13590 pycom13g20290 pycom15g24480 pycom16g00970 pycom16g19630
rosa_chinensis RchiOBHm_Chr4g0396591 RchiOBHm_Chr4g0445631
rosa_laevigata RLG00000005723 RLG00000009518
rosa_multiflora Rmu_co8031254.1_g000001 Rmu_co8351119.1_g000001 Rmu_sc0003637.1_g000024 Rmu_sc0010969.1_g000001 Rmu_sc0019383.1_g000002
rosa_roxburghii Rroxscaffold_5G00341440 Rroxscaffold_5G00386110
rosa_rugosa Rorug03G0348600 Rorug03G0348700 Rorug04G0363200 Rorug04G0363300 Rorug04G0363400 Rorug04G0363500
rosa_samantha Rh4AG070600 Rh4AG424700 Rh4AG425100 Rh4BG068500 Rh4BG436900 Rh4CG076300 Rh4CG451400 Rh4DG065600 Rh4DG433400
rosa_wichuraiana Rw4G005630 Rw4G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 226
Acc16I TGCGCA 1 cut(s) 225
AccB1I GGYRCC 1 cut(s) 1607
AccB7I CCANNNNNTGG 3 cut(s) 416, 973, 1688
AccIII TCCGGA 1 cut(s) 2443
AclI AACGTT 1 cut(s) 1435
AclWI GGATC 6 cut(s) 743, 1250, 2546, 2637, 2738, 2909
AcoI YGGCCR 1 cut(s) 1903
AcsI RAATTY 8 cut(s) 88, 1223, 2214, 2325, 2402, 2688, 2790, 2959
AcuI CTGAAG 6 cut(s) 177, 609, 1014, 1389, 1740, 2763
AcyI GRCGYC 2 cut(s) 1136, 2869
AdeI CACNNNGTG 1 cut(s) 380
AfiI CCNNNNNNNGG 9 cut(s) 242, 256, 257, 287, 416, 419, 731, 973, 1688
AflII CTTAAG 1 cut(s) 2453
AjiI CACGTC 1 cut(s) 2851
AjnI CCWGG 5 cut(s) 376, 535, 1851, 1905, 2025
AjuI GAANNNNNNNTTGG 4 cut(s) 79, 111, 484, 516
AleI CACNNNNGTG 1 cut(s) 2195
AloI GAACNNNNNNTCC 2 cut(s) 2421, 2453
Alw21I GWGCWC 3 cut(s) 460, 724, 899
Alw26I GTCTC 3 cut(s) 855, 1127, 2036
Alw44I GTGCAC 1 cut(s) 895
AlwI GGATC 6 cut(s) 743, 1250, 2546, 2637, 2738, 2909
AlwNI CAGNNNCTG 2 cut(s) 632, 1453
Ama87I CYCGRG 1 cut(s) 453
Aor13HI TCCGGA 1 cut(s) 2443
ApaI GGGCCC 3 cut(s) 209, 293, 399
ApaLI GTGCAC 1 cut(s) 895
ApoI RAATTY 8 cut(s) 88, 1223, 2214, 2325, 2402, 2688, 2790, 2959
ArsI GACNNNNNNTTYG 4 cut(s) 415, 447, 1586, 1618
AseI ATTAAT 1 cut(s) 903
AspA2I CCTAGG 1 cut(s) 1376
AspLEI GCGC 3 cut(s) 226, 532, 2182
AsuC2I CCSGG 3 cut(s) 27, 204, 243
AsuHPI GGTGA 3 cut(s) 162, 315, 1034
AsuII TTCGAA 1 cut(s) 143
AvaI CYCGRG 1 cut(s) 453
AvaII GGWCC 8 cut(s) 245, 260, 428, 539, 588, 734, 1031, 1163
AvrII CCTAGG 1 cut(s) 1376
BaeGI GKGCMC 4 cut(s) 209, 293, 399, 899
BaeI ACNNNNGTAYC 2 cut(s) 2570, 2603
BalI TGGCCA 1 cut(s) 1905
BanI GGYRCC 1 cut(s) 1607
BanII GRGCYC 5 cut(s) 209, 293, 399, 724, 1702
BarI GAAGNNNNNNTAC 2 cut(s) 987, 1019
Bbv12I GWGCWC 3 cut(s) 460, 724, 899
BbvCI CCTCAGC 1 cut(s) 480
BccI CCATC 9 cut(s) 997, 1163, 1573, 1690, 1965, 2147, 2590, 2926, 3009
BceAI ACGGC 2 cut(s) 1515, 2000
BciT130I CCWGG 5 cut(s) 378, 537, 1853, 1907, 2027
BciVI GTATCC 2 cut(s) 2278, 2598
BclI TGATCA 1 cut(s) 1087
BcnI CCSGG 3 cut(s) 27, 204, 243
BcoDI GTCTC 3 cut(s) 855, 1127, 2036
BfaI CTAG 3 cut(s) 1377, 1710, 2664
BfmI CTRYAG 6 cut(s) 874, 1108, 1323, 1496, 2412, 2810
BfoI RGCGCY 1 cut(s) 533
BfrI CTTAAG 1 cut(s) 2453
BfuI GTATCC 2 cut(s) 2278, 2598
BglII AGATCT 1 cut(s) 1953
BlnI CCTAGG 1 cut(s) 1376
BlpI GCTNAGC 1 cut(s) 2838
Bme1390I CCNGG 8 cut(s) 27, 204, 243, 378, 537, 1853, 1907, 2027
Bme18I GGWCC 8 cut(s) 245, 260, 428, 539, 588, 734, 1031, 1163
BmeT110I CYCGRG 1 cut(s) 453
BmgBI CACGTC 1 cut(s) 2851
BmrFI CCNGG 8 cut(s) 27, 204, 243, 378, 537, 1853, 1907, 2027
BmrI ACTGGG 3 cut(s) 876, 2088, 2284
BmsI GCATC 8 cut(s) 377, 1174, 1446, 1569, 1998, 2009, 2385, 2916
BmuI ACTGGG 3 cut(s) 876, 2088, 2284
BpmI CTGGAG 5 cut(s) 237, 519, 561, 738, 1335
Bpu10I CCTNAGC 2 cut(s) 480, 1200
Bpu1102I GCTNAGC 1 cut(s) 2838
Bpu14I TTCGAA 1 cut(s) 143
BpuEI CTTGAG 2 cut(s) 1974, 2720
BpuMI CCSGG 3 cut(s) 27, 204, 243
Bsa29I ATCGAT 1 cut(s) 2632
BsaAI YACGTR 1 cut(s) 286
BsaHI GRCGYC 2 cut(s) 1136, 2869
BsaI GGTCTC 1 cut(s) 2036
BsaJI CCNNGG 6 cut(s) 972, 1376, 1851, 2026, 2050, 2591
BsaWI WCCGGW 2 cut(s) 724, 2443
BsaXI ACNNNNNCTCC 8 cut(s) 706, 711, 736, 741, 811, 841, 2442, 2472
Bsc4I CCNNNNNNNGG 9 cut(s) 242, 256, 257, 287, 416, 419, 731, 973, 1688
Bse118I RCCGGY 1 cut(s) 364
Bse3DI GCAATG 2 cut(s) 1641, 2371
BseAI TCCGGA 1 cut(s) 2443
BseBI CCWGG 5 cut(s) 378, 537, 1853, 1907, 2027
BseCI ATCGAT 1 cut(s) 2632
BseDI CCNNGG 6 cut(s) 972, 1376, 1851, 2026, 2050, 2591
BseLI CCNNNNNNNGG 9 cut(s) 242, 256, 257, 287, 416, 419, 731, 973, 1688
BseMI GCAATG 2 cut(s) 1641, 2371
BseMII CTCAG 9 cut(s) 494, 798, 881, 1191, 1515, 1611, 1806, 2172, 2813
BseRI GAGGAG 5 cut(s) 259, 336, 459, 819, 1482
BseSI GKGCMC 4 cut(s) 209, 293, 399, 899
BsgI GTGCAG 1 cut(s) 569
Bsh1285I CGRYCG 1 cut(s) 137
BshNI GGYRCC 1 cut(s) 1607
BshVI ATCGAT 1 cut(s) 2632
BsiEI CGRYCG 1 cut(s) 137
BsiHKAI GWGCWC 3 cut(s) 460, 724, 899
BsiHKCI CYCGRG 1 cut(s) 453
BsiSI CCGG 6 cut(s) 27, 203, 242, 365, 725, 2444
BsiWI CGTACG 1 cut(s) 282
BslFI GGGAC 3 cut(s) 231, 273, 436
BslI CCNNNNNNNGG 9 cut(s) 242, 256, 257, 287, 416, 419, 731, 973, 1688
BsmAI GTCTC 3 cut(s) 855, 1127, 2036
BsmBI CGTCTC 1 cut(s) 1127
BsmFI GGGAC 3 cut(s) 231, 273, 436
BsmI GAATGC 3 cut(s) 499, 951, 1625
Bso31I GGTCTC 1 cut(s) 2036
BsoBI CYCGRG 1 cut(s) 453
Bsp119I TTCGAA 1 cut(s) 143
Bsp120I GGGCCC 3 cut(s) 205, 289, 395
Bsp1286I GDGCHC 7 cut(s) 209, 293, 399, 460, 724, 899, 1702
Bsp13I TCCGGA 1 cut(s) 2443
Bsp1407I TGTACA 4 cut(s) 1474, 1513, 2243, 2469
Bsp1720I GCTNAGC 1 cut(s) 2838
Bsp19I CCATGG 1 cut(s) 2050
BspCNI CTCAG 9 cut(s) 493, 797, 882, 1192, 1516, 1610, 1807, 2171, 2812
BspDI ATCGAT 1 cut(s) 2632
BspEI TCCGGA 1 cut(s) 2443
BspMAI CTGCAG 4 cut(s) 878, 1327, 1500, 2814
BspPI GGATC 6 cut(s) 743, 1250, 2546, 2637, 2738, 2909
BspQI GCTCTTC 2 cut(s) 990, 2936
BspT104I TTCGAA 1 cut(s) 143
BspT107I GGYRCC 1 cut(s) 1607
BspTI CTTAAG 1 cut(s) 2453
BspTNI GGTCTC 1 cut(s) 2036
BsrDI GCAATG 2 cut(s) 1641, 2371
BsrFI RCCGGY 1 cut(s) 364
BsrGI TGTACA 4 cut(s) 1474, 1513, 2243, 2469
BssAI RCCGGY 1 cut(s) 364
BssECI CCNNGG 6 cut(s) 972, 1376, 1851, 2026, 2050, 2591
BssNI GRCGYC 2 cut(s) 1136, 2869
BssT1I CCWWGG 3 cut(s) 972, 1376, 2050
Bst2UI CCWGG 5 cut(s) 378, 537, 1853, 1907, 2027
Bst4CI ACNGT 8 cut(s) 282, 669, 738, 2105, 2197, 2204, 2416, 2466
Bst6I CTCTTC 2 cut(s) 990, 2936
BstACI GRCGYC 2 cut(s) 1136, 2869
BstAFI CTTAAG 1 cut(s) 2453
BstAPI GCANNNNNTGC 1 cut(s) 1337
BstAUI TGTACA 4 cut(s) 1474, 1513, 2243, 2469
BstBAI YACGTR 1 cut(s) 286
BstBI TTCGAA 1 cut(s) 143
BstC8I GCNNGC 8 cut(s) 366, 395, 621, 659, 1266, 1333, 2066, 2505
BstDSI CCRYGG 1 cut(s) 2050
BstEII GGTNACC 1 cut(s) 2122
BstH2I RGCGCY 1 cut(s) 533
BstHHI GCGC 3 cut(s) 226, 532, 2182
BstMAI GTCTC 3 cut(s) 855, 1127, 2036
BstMCI CGRYCG 1 cut(s) 137
BstNI CCWGG 5 cut(s) 378, 537, 1853, 1907, 2027
BstNSI RCATGY 3 cut(s) 661, 704, 1335
BstPI GGTNACC 1 cut(s) 2122
BstSCI CCNGG 8 cut(s) 25, 202, 241, 376, 535, 1851, 1905, 2025
BstSFI CTRYAG 6 cut(s) 874, 1108, 1323, 1496, 2412, 2810
BstSLI GKGCMC 4 cut(s) 209, 293, 399, 899
BstX2I RGATCY 3 cut(s) 1953, 2743, 2914
BstXI CCANNNNNNTGG 1 cut(s) 585
BstYI RGATCY 3 cut(s) 1953, 2743, 2914
Bsu15I ATCGAT 1 cut(s) 2632
BsuI GTATCC 2 cut(s) 2278, 2598
BsuTUI ATCGAT 1 cut(s) 2632
BtgI CCRYGG 1 cut(s) 2050
BtrI CACGTC 1 cut(s) 2851
BtsI GCAGTG 3 cut(s) 1150, 1342, 2010
Cac8I GCNNGC 8 cut(s) 366, 395, 621, 659, 1266, 1333, 2066, 2505
CaiI CAGNNNCTG 2 cut(s) 632, 1453
CfoI GCGC 3 cut(s) 226, 532, 2182
Cfr10I RCCGGY 1 cut(s) 364
ClaI ATCGAT 1 cut(s) 2632
CseI GACGC 4 cut(s) 618, 1144, 1952, 2877
CsiI ACCWGGT 1 cut(s) 376
CspCI CAANNNNNGTGG 2 cut(s) 651, 686
DraIII CACNNNGTG 1 cut(s) 380
DrdI GACNNNNNNGTC 1 cut(s) 226
DseDI GACNNNNNNGTC 1 cut(s) 226
EaeI YGGCCR 1 cut(s) 1903
Eam1104I CTCTTC 2 cut(s) 990, 2936
EarI CTCTTC 2 cut(s) 990, 2936
EciI GGCGGA 2 cut(s) 477, 822
Ecl136II GAGCTC 1 cut(s) 722
Eco130I CCWWGG 3 cut(s) 972, 1376, 2050
Eco147I AGGCCT 1 cut(s) 1198
Eco24I GRGCYC 5 cut(s) 209, 293, 399, 724, 1702
Eco31I GGTCTC 1 cut(s) 2036
Eco32I GATATC 1 cut(s) 2752
Eco47I GGWCC 8 cut(s) 245, 260, 428, 539, 588, 734, 1031, 1163
Eco53kI GAGCTC 1 cut(s) 722
Eco57I CTGAAG 6 cut(s) 177, 609, 1014, 1389, 1740, 2763
Eco88I CYCGRG 1 cut(s) 453
Eco91I GGTNACC 1 cut(s) 2122
EcoICRI GAGCTC 1 cut(s) 722
EcoO109I RGGNCCY 4 cut(s) 245, 260, 396, 1373
EcoO65I GGTNACC 1 cut(s) 2122
EcoRI GAATTC 1 cut(s) 2214
EcoRII CCWGG 5 cut(s) 376, 535, 1851, 1905, 2025
EcoRV GATATC 1 cut(s) 2752
EcoT14I CCWWGG 3 cut(s) 972, 1376, 2050
EcoT22I ATGCAT 2 cut(s) 501, 597
EcoT38I GRGCYC 5 cut(s) 209, 293, 399, 724, 1702
ErhI CCWWGG 3 cut(s) 972, 1376, 2050
Esp3I CGTCTC 1 cut(s) 1127
FaqI GGGAC 3 cut(s) 231, 273, 436
FauI CCCGC 5 cut(s) 369, 386, 413, 1735, 2503
FbaI TGATCA 1 cut(s) 1087
FriOI GRGCYC 5 cut(s) 209, 293, 399, 724, 1702
FspBI CTAG 3 cut(s) 1377, 1710, 2664
FspI TGCGCA 1 cut(s) 225
GlaI GCGC 3 cut(s) 225, 531, 2181
GsuI CTGGAG 5 cut(s) 237, 519, 561, 738, 1335
HaeII RGCGCY 1 cut(s) 533
HapII CCGG 6 cut(s) 27, 203, 242, 365, 725, 2444
HgaI GACGC 4 cut(s) 618, 1144, 1952, 2877
HhaI GCGC 3 cut(s) 226, 532, 2182
Hin1I GRCGYC 2 cut(s) 1136, 2869
Hin6I GCGC 3 cut(s) 224, 530, 2180
HinP1I GCGC 3 cut(s) 224, 530, 2180
HincII GTYRAC 2 cut(s) 1535, 2086
HindII GTYRAC 2 cut(s) 1535, 2086
HinfI GANTC 7 cut(s) 95, 124, 1595, 1893, 2653, 2863, 3010
HpaII CCGG 6 cut(s) 27, 203, 242, 365, 725, 2444
HphI GGTGA 3 cut(s) 162, 315, 1034
Hpy166II GTNNAC 7 cut(s) 38, 542, 881, 897, 1535, 2086, 2200
Hpy8I GTNNAC 7 cut(s) 38, 542, 881, 897, 1535, 2086, 2200
Hpy99I CGWCG 2 cut(s) 2871, 2951
HpyCH4III ACNGT 8 cut(s) 282, 669, 738, 2105, 2197, 2204, 2416, 2466
HpyCH4IV ACGT 5 cut(s) 285, 584, 1435, 2070, 2850
HpySE526I ACGT 5 cut(s) 285, 584, 1435, 2070, 2850
Hsp92I GRCGYC 2 cut(s) 1136, 2869
HspAI GCGC 3 cut(s) 224, 530, 2180
KflI GGGWCCC 2 cut(s) 245, 260
Kpn2I TCCGGA 1 cut(s) 2443
KroI GCCGGC 1 cut(s) 364
KroNI GCCGGC 1 cut(s) 366
Ksp22I TGATCA 1 cut(s) 1087
LguI GCTCTTC 2 cut(s) 990, 2936
LmnI GCTCC 6 cut(s) 719, 727, 969, 1316, 1697, 2463
LweI GCATC 8 cut(s) 377, 1174, 1446, 1569, 1998, 2009, 2385, 2916
MabI ACCWGGT 1 cut(s) 376
MaeI CTAG 3 cut(s) 1377, 1710, 2664
MaeII ACGT 5 cut(s) 285, 584, 1435, 2070, 2850
MaeIII GTNAC 5 cut(s) 316, 1978, 2105, 2122, 2221
MfeI CAATTG 3 cut(s) 1686, 2319, 2637
MflI RGATCY 3 cut(s) 1953, 2743, 2914
MhlI GDGCHC 7 cut(s) 209, 293, 399, 460, 724, 899, 1702
MlsI TGGCCA 1 cut(s) 1905
MluNI TGGCCA 1 cut(s) 1905
MlyI GAGTC 1 cut(s) 1589
MmeI TCCRAC 3 cut(s) 46, 84, 991
Mox20I TGGCCA 1 cut(s) 1905
Mph1103I ATGCAT 2 cut(s) 501, 597
MroI TCCGGA 1 cut(s) 2443
MroNI GCCGGC 1 cut(s) 364
MscI TGGCCA 1 cut(s) 1905
MseI TTAA 3 cut(s) 903, 1844, 2454
MslI CAYNNNNRTG 1 cut(s) 2195
Msp20I TGGCCA 1 cut(s) 1905
MspA1I CMGCKG 5 cut(s) 613, 1328, 1592, 1778, 2276
MspCI CTTAAG 1 cut(s) 2453
MspI CCGG 6 cut(s) 27, 203, 242, 365, 725, 2444
MspR9I CCNGG 8 cut(s) 27, 204, 243, 378, 537, 1853, 1907, 2027
MunI CAATTG 3 cut(s) 1686, 2319, 2637
Mva1269I GAATGC 3 cut(s) 499, 951, 1625
MvaI CCWGG 5 cut(s) 378, 537, 1853, 1907, 2027
NaeI GCCGGC 1 cut(s) 366
NciI CCSGG 3 cut(s) 27, 204, 243
NcoI CCATGG 1 cut(s) 2050
NgoMIV GCCGGC 1 cut(s) 364
NmeAIII GCCGAG 1 cut(s) 369
NmuCI GTSAC 2 cut(s) 1978, 2105
NsbI TGCGCA 1 cut(s) 225
NsiI ATGCAT 2 cut(s) 501, 597
NspI RCATGY 3 cut(s) 661, 704, 1335
NspV TTCGAA 1 cut(s) 143
OliI CACNNNNGTG 1 cut(s) 2195
PaeI GCATGC 2 cut(s) 661, 1335
PaeR7I CTCGAG 1 cut(s) 453
PceI AGGCCT 1 cut(s) 1198
PciSI GCTCTTC 2 cut(s) 990, 2936
PcsI WCGNNNNNNNCGW 2 cut(s) 278, 1045
PctI GAATGC 3 cut(s) 499, 951, 1625
PdiI GCCGGC 1 cut(s) 366
PfeI GAWTC 6 cut(s) 95, 124, 1893, 2653, 2863, 3010
Pfl23II CGTACG 1 cut(s) 282
PflMI CCANNNNNTGG 3 cut(s) 416, 973, 1688
PleI GAGTC 1 cut(s) 1589
PpsI GAGTC 1 cut(s) 1589
Ppu21I YACGTR 1 cut(s) 286
PpuMI RGGWCCY 2 cut(s) 245, 260
PshBI ATTAAT 1 cut(s) 903
Psp124BI GAGCTC 1 cut(s) 724
Psp1406I AACGTT 1 cut(s) 1435
Psp5II RGGWCCY 2 cut(s) 245, 260
Psp6I CCWGG 5 cut(s) 376, 535, 1851, 1905, 2025
PspEI GGTNACC 1 cut(s) 2122
PspGI CCWGG 5 cut(s) 376, 535, 1851, 1905, 2025
PspLI CGTACG 1 cut(s) 282
PspOMI GGGCCC 3 cut(s) 205, 289, 395
PspPPI RGGWCCY 2 cut(s) 245, 260
PspXI VCTCGAGB 1 cut(s) 453
PstI CTGCAG 4 cut(s) 878, 1327, 1500, 2814
PstNI CAGNNNCTG 2 cut(s) 632, 1453
PsuI RGATCY 3 cut(s) 1953, 2743, 2914
PvuII CAGCTG 4 cut(s) 613, 1592, 1778, 2276
RseI CAYNNNNRTG 1 cut(s) 2195
SacI GAGCTC 1 cut(s) 724
SapI GCTCTTC 2 cut(s) 990, 2936
SaqAI TTAA 3 cut(s) 903, 1844, 2454
SchI GAGTC 1 cut(s) 1589
ScrFI CCNGG 8 cut(s) 27, 204, 243, 378, 537, 1853, 1907, 2027
SduI GDGCHC 7 cut(s) 209, 293, 399, 460, 724, 899, 1702
SexAI ACCWGGT 1 cut(s) 376
SfaNI GCATC 8 cut(s) 377, 1174, 1446, 1569, 1998, 2009, 2385, 2916
SfcI CTRYAG 6 cut(s) 874, 1108, 1323, 1496, 2412, 2810
Sfr274I CTCGAG 1 cut(s) 453
SfuI TTCGAA 1 cut(s) 143
SinI GGWCC 8 cut(s) 245, 260, 428, 539, 588, 734, 1031, 1163
SlaI CTCGAG 1 cut(s) 453
SmiMI CAYNNNNRTG 1 cut(s) 2195
SmlI CTYRAG 5 cut(s) 9, 453, 1989, 2453, 2699
SmoI CTYRAG 5 cut(s) 9, 453, 1989, 2453, 2699
SphI GCATGC 2 cut(s) 661, 1335
SseBI AGGCCT 1 cut(s) 1198
SspMI CTAG 3 cut(s) 1377, 1710, 2664
SstI GAGCTC 1 cut(s) 724
StuI AGGCCT 1 cut(s) 1198
StyD4I CCNGG 8 cut(s) 25, 202, 241, 376, 535, 1851, 1905, 2025
StyI CCWWGG 3 cut(s) 972, 1376, 2050
TaaI ACNGT 8 cut(s) 282, 669, 738, 2105, 2197, 2204, 2416, 2466
TaiI ACGT 5 cut(s) 288, 587, 1438, 2073, 2853
TaqI TCGA 8 cut(s) 133, 143, 454, 2218, 2632, 2866, 2949, 2982
TatI WGTACW 6 cut(s) 917, 1242, 1474, 1513, 2243, 2469
TauI GCSGC 8 cut(s) 8, 449, 556, 559, 619, 1331, 1613, 2318
TfiI GAWTC 6 cut(s) 95, 124, 1893, 2653, 2863, 3010
Tru1I TTAA 3 cut(s) 903, 1844, 2454
Tru9I TTAA 3 cut(s) 903, 1844, 2454
TseFI GTSAC 2 cut(s) 1978, 2105
Tsp45I GTSAC 2 cut(s) 1978, 2105
TspGWI ACGGA 4 cut(s) 1820, 2258, 2342, 2642
Van91I CCANNNNNTGG 3 cut(s) 416, 973, 1688
Vha464I CTTAAG 1 cut(s) 2453
VneI GTGCAC 1 cut(s) 895
VpaK11BI GGWCC 8 cut(s) 245, 260, 428, 539, 588, 734, 1031, 1163
VspI ATTAAT 1 cut(s) 903
XapI RAATTY 8 cut(s) 88, 1223, 2214, 2325, 2402, 2688, 2790, 2959
XceI RCATGY 3 cut(s) 661, 704, 1335
XcmI CCANNNNNNNNNTGG 1 cut(s) 1157
XhoI CTCGAG 1 cut(s) 453
XmaJI CCTAGG 1 cut(s) 1376
XspI CTAG 3 cut(s) 1377, 1710, 2664
Zsp2I ATGCAT 2 cut(s) 501, 597
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.