Rmu_sc0019383.1_g000002

Protein transport protein Sec24-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019383.1
OG0000554
Physical Location & Seq
Reverse (-)
6609 .. 15495
8887 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0019383.1_g000002.1.cds

Sequence Viewer

Length: 3267 bp
atggtgactccggtgcctccagggccacctagacctggtaatcatccaccaaaccctaatgttaaccccaacacccaatctttatctgataatatgcaaaatttgaatctcaatcggccgccaccgccttcaatgccccatcctagaccttcatcgacgccgtatccggcgccattttctaggcctggccctcctactccggcgccggtgcggccttctggacccccaccgccttcatttcctccgggaaggccttctggcccgcctgttggtcaaagtcaaccttctccacttggctacagaccacctcctcctaccggtactttcccaccgaaccgtcaaatggcaccgcctcggccaccgcctggtgcccgactgggcgggatggggcctcctcctccagttatgccttcaccaggtgctgtgatgaataatgggcagccgaattttgcaccaggaggtttgcaggctgggccacgttttcctcctccagctgggattgcatcacaactgacgccgccgcctcctctcggacctccaacagcaatggcaggagcttgggcgccaccgcagcctcaaaccatgcatgcttttttgggcagtgctagtcctccagtgcaacagcagcgatcaccatttgcaggggcagcccaacctccttcagttcctccttatggatcacaaccttggtcaatgcaacccaaccaagtgcctccacctccaccaatttcccaatctccgcaagcacctaggatgtttggaatgccaccacccatgccaaatcagtctatgactgccatatcacatgctgtgggtcaaactggagccccagtggcaggtccatctaagattgatcctagtcaaattccgcgacccgttccagattcctccgttgttctgcatgaaactcgccaaggcaatcaggccaaccctcctccgcctgctacaagcgattacattgtcagagacactggaaactgcagcccacgtaatatgaggtgcactatcaatcagatcccatgcagtgctgacctcttgacgacatcagggatgcagttggctttgctggtccaacccttggcccttcctcatccttctgaagagcccatacaagtcgtggatttaggtgaaagtggtcctgttcgttgttctcgttgcaaaggctatataaatcctttcatgaagttcattgatcagggaaggcagttcatctgcaacttgtgtggatttactgatgagactccccgtgactaccactgcaaccttggtccagatggtaggcgtagagatgctgatgatagacccgagctttgtagaggaatggtggaaattgttgctccaaaagaatacatggtgcgtgatccaatgctggctatgtatttcttccttattgatgtatccatgaatgccatacaaactggagcaactgcagctgcatgcactgcaatcagtcaagttatttccgatcttcctgaaggtcctcggacaaaggtgggaattgcaacatttgactgtactatacatttttataatttgaaacgtgctttacagcaggaaggtcctcggacaaaggtgggaattgcaacatttgactgtactattcatttttataatttgaaacgtgctttacagcagccattgatgctcattgttcctgatatacaagatgtttatactcctctggagactgatgtgattgttcagctttctgagtgccgtcagcatttagagctattgcttgaaagcatcccatccatgtttgaaaataacaaaacagctgactcagcctttggtgctgcagtcaaggctgcattcttggcaatgaaaagtaatggaggaaaacttttggtatttcagtcagtattgccatctgttgggactggagccctttccgctagagaggctgaaggaagaacgaatacttctgctggtgagaaggaggcccataaattacttcaaccagccgataagactttagaatcaatggcaatggaagttgctgagtatcaggtttgtgtagatatttttattaccacccagacttacatggacatagcttctatctctgtcatcccaagaactactggtggacagacttacatggacatagcttctatctctgtcatcccaagaactactggaggacagatctattactattaccctttctctgctgttactgacactgcaaagatctacaatgatcttaaatggaatattacaaggcctcaaggttttgaggcagtgatgcgtgtgcgatgcagccagggtctccaagttaacgagtaccgcgggaacttctgcaagcgcattcctacagatgttgacctacctgggattgactctgacaaaactataatggtaaccataaaacatgatgacaaattgcaggacggctcagaatgtgtgtttcagtgtgcgcttctgtacactactgtgtatggccaaagaatgattcgagttttaacactagccctaccatgcacaagtatgctgaataatcttttccgcacagctgatttggatactcagtttgcttgtatcttgaagcaaggggctaatgaaatcccttctagcccactcctgcaagtccgtgaacgactgactgaccgttgcatcagcattctctgttcttatcgtaaattttgtgctacagtaacatcaagtggacaacttattcttccagaaacactgaagcttctacctctatacatccttgctttaacgaaaagtacaggattgcgatcttctgggaaaatagatgaacgatctttttggatcaactatgtgtcctctgtttccactgctttagcagtagcacttgtttatccacggatgctggcaatccacaaccttaattgtaaggatgacgcatctctttgccctcctgcaattccactttctagtgagcatatcagtgatgagggaatttatcttctcgaaaatggagaggattgtctaatttatgtagggagctcagttgatccagatatcttgaacaagttgtttggaattccctcagttgatgaaattcctactcagtttgtcctgcagcagtatgacaatccattctcaaagaaactaaatgatttgataaatgagatacgacgccaaagatgttcctacctccgcttgaagttatgcaagaaaggagatccatcagggatgcttttcttctcttatatcgtagaagacaagagctcgattggcctctcatatgttgagttcctaatacatatccatcggcaaattcaaatgaaaatgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

1088

Amino Acids

118.48

Weight (kDa)

8.01

Isoelectric Point (pI)

53.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000554)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT4G32640 AT4G32640
fragaria_vesca FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000
malus_domestica MD02G1169200.v1.1 MD13G1230500.v1.1 MD15G1281700.v1.1 MD16G1009900.v1.1 MD16G1235300.v1.1
prunus_persica Prupe.1G056500_v2.0.a1 Prupe.1G056500_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1
pyrus_communis pycom02g13590 pycom13g20290 pycom15g24480 pycom16g00970 pycom16g19630
rosa_chinensis RchiOBHm_Chr4g0396591 RchiOBHm_Chr4g0445631
rosa_laevigata RLG00000005723 RLG00000009518
rosa_multiflora Rmu_co8031254.1_g000001 Rmu_co8351119.1_g000001 Rmu_sc0003637.1_g000024 Rmu_sc0010969.1_g000001 Rmu_sc0019383.1_g000002
rosa_roxburghii Rroxscaffold_5G00341440 Rroxscaffold_5G00386110
rosa_rugosa Rorug03G0348600 Rorug03G0348700 Rorug04G0363200 Rorug04G0363300 Rorug04G0363400 Rorug04G0363500
rosa_samantha Rh4AG070600 Rh4AG424700 Rh4AG425100 Rh4BG068500 Rh4BG436900 Rh4CG076300 Rh4CG451400 Rh4DG065600 Rh4DG433400
rosa_wichuraiana Rw4G005630 Rw4G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1530, 1611
Acc36I ACCTGC 1 cut(s) 827
AccB1I GGYRCC 6 cut(s) 13, 169, 202, 346, 368, 562
AccB7I CCANNNNNTGG 3 cut(s) 365, 1078, 1874
AccII CGCG 2 cut(s) 871, 2292
AclWI GGATC 7 cut(s) 685, 848, 1009, 1355, 2786, 2978, 3149
AcoI YGGCCR 3 cut(s) 116, 356, 2443
AcsI RAATTY 8 cut(s) 100, 445, 864, 2642, 2928, 3012, 3030, 3249
AcuI CTGAAG 5 cut(s) 645, 1119, 1494, 1926, 2714
AcyI GRCGYC 6 cut(s) 158, 170, 203, 515, 563, 3109
AdeI CACNNNGTG 1 cut(s) 419
AfaI GTAC 6 cut(s) 322, 1516, 1597, 2288, 2429, 2734
AgeI ACCGGT 1 cut(s) 317
AjnI CCWGG 8 cut(s) 19, 34, 184, 364, 415, 454, 2265, 2332
AjuI GAANNNNNNNTTGG 2 cut(s) 2439, 2471
AleI CACNNNNGTG 1 cut(s) 2435
Alw21I GWGCWC 3 cut(s) 1004, 2978, 3203
Alw26I GTCTC 4 cut(s) 960, 1232, 1679, 2276
Alw44I GTGCAC 1 cut(s) 1000
AlwI GGATC 7 cut(s) 685, 848, 1009, 1355, 2786, 2978, 3149
AlwNI CAGNNNCTG 1 cut(s) 422
Ama87I CYCGRG 1 cut(s) 1304
ApaLI GTGCAC 1 cut(s) 1000
ApoI RAATTY 8 cut(s) 100, 445, 864, 2642, 2928, 3012, 3030, 3249
ArsI GACNNNNNNTTYG 4 cut(s) 1293, 1325, 1772, 1804
AsiGI ACCGGT 1 cut(s) 317
Asp700I GAANNNNTTC 1 cut(s) 253
AspA2I CCTAGG 1 cut(s) 749
AspLEI GCGC 5 cut(s) 172, 205, 565, 2310, 2422
AsuC2I CCSGG 1 cut(s) 246
AsuHPI GGTGA 5 cut(s) 16, 405, 624, 1139, 1943
AvaI CYCGRG 1 cut(s) 1304
AvaII GGWCC 8 cut(s) 221, 533, 839, 1069, 1136, 1268, 1478, 1559
AvrII CCTAGG 1 cut(s) 749
BaeGI GKGCMC 2 cut(s) 373, 1004
BalI TGGCCA 1 cut(s) 2445
BanI GGYRCC 6 cut(s) 13, 169, 202, 346, 368, 562
BanII GRGCYC 5 cut(s) 829, 1107, 1888, 2978, 3203
BarI GAAGNNNNNNTAC 4 cut(s) 1092, 1124, 1903, 1935
BbsI GAAGAC 1 cut(s) 3198
Bbv12I GWGCWC 3 cut(s) 1004, 2978, 3203
BccI CCATC 8 cut(s) 147, 379, 850, 1268, 1759, 1876, 3166, 3249
BceAI ACGGC 3 cut(s) 145, 1701, 2410
BcgI CGANNNNNNTGC 2 cut(s) 890, 924
BciT130I CCWGG 8 cut(s) 21, 36, 186, 366, 417, 456, 2267, 2334
BciVI GTATCC 3 cut(s) 174, 1408, 2518
BclI TGATCA 1 cut(s) 1192
BcnI CCSGG 1 cut(s) 246
BcoDI GTCTC 4 cut(s) 960, 1232, 1679, 2276
BfmI CTRYAG 7 cut(s) 298, 979, 1428, 1797, 2316, 2652, 3050
BfoI RGCGCY 3 cut(s) 173, 206, 566
BfuAI ACCTGC 1 cut(s) 827
BfuI GTATCC 3 cut(s) 174, 1408, 2518
BglI GCCNNNNNGGC 3 cut(s) 22, 211, 833
BglII AGATCT 2 cut(s) 2148, 2193
BlnI CCTAGG 1 cut(s) 749
Bme1390I CCNGG 9 cut(s) 21, 36, 186, 246, 366, 417, 456, 2267, 2334
Bme18I GGWCC 8 cut(s) 221, 533, 839, 1069, 1136, 1268, 1478, 1559
BmeT110I CYCGRG 1 cut(s) 1304
BmrFI CCNGG 9 cut(s) 21, 36, 186, 246, 366, 417, 456, 2267, 2334
BmrI ACTGGG 2 cut(s) 386, 824
BmuI ACTGGG 2 cut(s) 386, 824
BpiI GAAGAC 1 cut(s) 3198
BpmI CTGGAG 8 cut(s) 384, 474, 597, 843, 1440, 1703, 1902, 2160
BpuEI CTTGAG 1 cut(s) 2214
BpuMI CCSGG 1 cut(s) 246
BsaAI YACGTR 1 cut(s) 989
BsaBI GATNNNNATC 1 cut(s) 2743
BsaHI GRCGYC 6 cut(s) 158, 170, 203, 515, 563, 3109
BsaI GGTCTC 1 cut(s) 2276
BsaWI WCCGGW 2 cut(s) 10, 317
BsaXI ACNNNNNCTCC 2 cut(s) 816, 846
Bse118I RCCGGY 2 cut(s) 205, 317
Bse3DI GCAATG 3 cut(s) 552, 1827, 1995
Bse8I GATNNNNATC 1 cut(s) 2743
BseBI CCWGG 8 cut(s) 21, 36, 186, 366, 417, 456, 2267, 2334
BseJI GATNNNNATC 1 cut(s) 2743
BseMI GCAATG 3 cut(s) 552, 1827, 1995
BseMII CTCAG 8 cut(s) 1701, 1797, 1992, 2412, 2543, 2991, 3033, 3053
BseRI GAGGAG 7 cut(s) 300, 384, 387, 477, 516, 924, 1668
BseSI GKGCMC 2 cut(s) 373, 1004
BseX3I CGGCCG 1 cut(s) 116
BseYI CCCAGC 2 cut(s) 470, 494
Bsh1236I CGCG 2 cut(s) 871, 2292
Bsh1285I CGRYCG 1 cut(s) 119
BshNI GGYRCC 6 cut(s) 13, 169, 202, 346, 368, 562
BshTI ACCGGT 1 cut(s) 317
BsiEI CGRYCG 1 cut(s) 119
BsiHKAI GWGCWC 3 cut(s) 1004, 2978, 3203
BsiHKCI CYCGRG 1 cut(s) 1304
BsiSI CCGG 6 cut(s) 11, 167, 200, 206, 245, 318
BslFI GGGAC 1 cut(s) 1891
BsmAI GTCTC 4 cut(s) 960, 1232, 1679, 2276
BsmFI GGGAC 1 cut(s) 1891
BsmI GAATGC 5 cut(s) 768, 1411, 1811, 2310, 2622
Bso31I GGTCTC 1 cut(s) 2276
BsoBI CYCGRG 1 cut(s) 1304
Bsp1286I GDGCHC 7 cut(s) 373, 829, 1004, 1107, 1888, 2978, 3203
Bsp1407I TGTACA 1 cut(s) 2427
BspCNI CTCAG 8 cut(s) 1702, 1796, 1993, 2411, 2542, 2990, 3032, 3052
BspFNI CGCG 2 cut(s) 871, 2292
BspHI TCATGA 1 cut(s) 1179
BspMAI CTGCAG 4 cut(s) 983, 1432, 1801, 3054
BspMI ACCTGC 1 cut(s) 827
BspPI GGATC 7 cut(s) 685, 848, 1009, 1355, 2786, 2978, 3149
BspQI GCTCTTC 1 cut(s) 1095
BspT107I GGYRCC 6 cut(s) 13, 169, 202, 346, 368, 562
BspTNI GGTCTC 1 cut(s) 2276
BsrDI GCAATG 3 cut(s) 552, 1827, 1995
BsrFI RCCGGY 2 cut(s) 205, 317
BsrGI TGTACA 1 cut(s) 2427
BssAI RCCGGY 2 cut(s) 205, 317
BssNI GRCGYC 6 cut(s) 158, 170, 203, 515, 563, 3109
BssT1I CCWWGG 5 cut(s) 686, 749, 913, 1077, 1264
Bst2UI CCWGG 8 cut(s) 21, 36, 186, 366, 417, 456, 2267, 2334
Bst4CI ACNGT 6 cut(s) 338, 1514, 1595, 2437, 2612, 2656
Bst6I CTCTTC 1 cut(s) 1095
BstACI GRCGYC 6 cut(s) 158, 170, 203, 515, 563, 3109
BstAPI GCANNNNNTGC 1 cut(s) 1442
BstAUI TGTACA 1 cut(s) 2427
BstBAI YACGTR 1 cut(s) 989
BstC8I GCNNGC 9 cut(s) 263, 468, 588, 744, 942, 1371, 1438, 2306, 2841
BstDEI CTNAG 9 cut(s) 846, 1710, 1783, 2001, 2398, 2529, 2977, 3019, 3039
BstDSI CCRYGG 2 cut(s) 2290, 2831
BstEII GGTNACC 1 cut(s) 2362
BstENI CCTNNNNNAGG 1 cut(s) 414
BstFNI CGCG 2 cut(s) 871, 2292
BstH2I RGCGCY 3 cut(s) 173, 206, 566
BstHHI GCGC 5 cut(s) 172, 205, 565, 2310, 2422
BstMAI GTCTC 4 cut(s) 960, 1232, 1679, 2276
BstMCI CGRYCG 1 cut(s) 119
BstNI CCWGG 8 cut(s) 21, 36, 186, 366, 417, 456, 2267, 2334
BstNSI RCATGY 3 cut(s) 590, 809, 1440
BstPI GGTNACC 1 cut(s) 2362
BstSCI CCNGG 9 cut(s) 19, 34, 184, 244, 364, 415, 454, 2265, 2332
BstSFI CTRYAG 7 cut(s) 298, 979, 1428, 1797, 2316, 2652, 3050
BstSLI GKGCMC 2 cut(s) 373, 1004
BstUI CGCG 2 cut(s) 871, 2292
BstV2I GAAGAC 1 cut(s) 3198
BstX2I RGATCY 4 cut(s) 1014, 2148, 2193, 3154
BstYI RGATCY 4 cut(s) 1014, 2148, 2193, 3154
BstZI CGGCCG 1 cut(s) 116
BsuI GTATCC 3 cut(s) 174, 1408, 2518
BtgI CCRYGG 2 cut(s) 2290, 2831
BtgZI GCGATG 1 cut(s) 2272
BtsI GCAGTG 7 cut(s) 607, 1030, 1255, 1440, 2184, 2250, 2802
BveI ACCTGC 1 cut(s) 827
Cac8I GCNNGC 9 cut(s) 263, 468, 588, 744, 942, 1371, 1438, 2306, 2841
CaiI CAGNNNCTG 1 cut(s) 422
CciI TCATGA 1 cut(s) 1179
CfoI GCGC 5 cut(s) 172, 205, 565, 2310, 2422
Cfr10I RCCGGY 2 cut(s) 205, 317
Cfr42I CCGCGG 1 cut(s) 2293
CseI GACGC 4 cut(s) 166, 523, 2879, 3117
CsiI ACCWGGT 2 cut(s) 34, 415
Csp6I GTAC 6 cut(s) 321, 1515, 1596, 2287, 2428, 2733
CspAI ACCGGT 1 cut(s) 317
CspCI CAANNNNNGTGG 2 cut(s) 1204, 1239
CviQI GTAC 6 cut(s) 321, 1515, 1596, 2287, 2428, 2733
DdeI CTNAG 9 cut(s) 846, 1710, 1783, 2001, 2398, 2529, 2977, 3019, 3039
DinI GGCGCC 3 cut(s) 171, 204, 564
DraIII CACNNNGTG 1 cut(s) 419
EaeI YGGCCR 3 cut(s) 116, 356, 2443
EagI CGGCCG 1 cut(s) 116
Eam1104I CTCTTC 1 cut(s) 1095
EarI CTCTTC 1 cut(s) 1095
EciI GGCGGA 1 cut(s) 927
Ecl136II GAGCTC 2 cut(s) 2976, 3201
EclXI CGGCCG 1 cut(s) 116
Eco130I CCWWGG 5 cut(s) 686, 749, 913, 1077, 1264
Eco147I AGGCCT 3 cut(s) 184, 253, 2227
Eco24I GRGCYC 5 cut(s) 829, 1107, 1888, 2978, 3203
Eco31I GGTCTC 1 cut(s) 2276
Eco32I GATATC 1 cut(s) 2992
Eco47I GGWCC 8 cut(s) 221, 533, 839, 1069, 1136, 1268, 1478, 1559
Eco52I CGGCCG 1 cut(s) 116
Eco53kI GAGCTC 2 cut(s) 2976, 3201
Eco57I CTGAAG 5 cut(s) 645, 1119, 1494, 1926, 2714
Eco88I CYCGRG 1 cut(s) 1304
Eco91I GGTNACC 1 cut(s) 2362
EcoICRI GAGCTC 2 cut(s) 2976, 3201
EcoNI CCTNNNNNAGG 1 cut(s) 414
EcoO109I RGGNCCY 3 cut(s) 389, 1478, 1559
EcoO65I GGTNACC 1 cut(s) 2362
EcoRI GAATTC 1 cut(s) 3012
EcoRII CCWGG 8 cut(s) 19, 34, 184, 364, 415, 454, 2265, 2332
EcoRV GATATC 1 cut(s) 2992
EcoT14I CCWWGG 5 cut(s) 686, 749, 913, 1077, 1264
EcoT22I ATGCAT 1 cut(s) 588
EcoT38I GRGCYC 5 cut(s) 829, 1107, 1888, 2978, 3203
EgeI GGCGCC 3 cut(s) 171, 204, 564
EheI GGCGCC 3 cut(s) 171, 204, 564
ErhI CCWWGG 5 cut(s) 686, 749, 913, 1077, 1264
FalI AAGNNNNNCTT 2 cut(s) 268, 300
FaqI GGGAC 1 cut(s) 1891
FauI CCCGC 3 cut(s) 270, 374, 2285
FauNDI CATATG 1 cut(s) 3217
FbaI TGATCA 1 cut(s) 1192
FriOI GRGCYC 5 cut(s) 829, 1107, 1888, 2978, 3203
GlaI GCGC 5 cut(s) 171, 204, 564, 2309, 2421
GsaI CCCAGC 2 cut(s) 474, 498
GsuI CTGGAG 8 cut(s) 384, 474, 597, 843, 1440, 1703, 1902, 2160
HaeII RGCGCY 3 cut(s) 173, 206, 566
HapII CCGG 6 cut(s) 11, 167, 200, 206, 245, 318
HgaI GACGC 4 cut(s) 166, 523, 2879, 3117
HhaI GCGC 5 cut(s) 172, 205, 565, 2310, 2422
Hin1I GRCGYC 6 cut(s) 158, 170, 203, 515, 563, 3109
Hin6I GCGC 5 cut(s) 170, 203, 563, 2308, 2420
HinP1I GCGC 5 cut(s) 170, 203, 563, 2308, 2420
HincII GTYRAC 4 cut(s) 64, 281, 2281, 2326
HindII GTYRAC 4 cut(s) 64, 281, 2281, 2326
HindIII AAGCTT 1 cut(s) 2696
HinfI GANTC 8 cut(s) 7, 106, 884, 1240, 1781, 1979, 2342, 2455
HpaI GTTAAC 2 cut(s) 64, 2281
HpaII CCGG 6 cut(s) 11, 167, 200, 206, 245, 318
HphI GGTGA 5 cut(s) 16, 405, 624, 1139, 1943
Hpy166II GTNNAC 9 cut(s) 64, 281, 1002, 2090, 2281, 2326, 2430, 2597, 2669
Hpy8I GTNNAC 9 cut(s) 64, 281, 1002, 2090, 2281, 2326, 2430, 2597, 2669
Hpy99I CGWCG 2 cut(s) 160, 3111
HpyCH4III ACNGT 6 cut(s) 338, 1514, 1595, 2437, 2612, 2656
HpyCH4IV ACGT 4 cut(s) 478, 988, 1540, 1621
HpyF3I CTNAG 9 cut(s) 846, 1710, 1783, 2001, 2398, 2529, 2977, 3019, 3039
HpySE526I ACGT 4 cut(s) 478, 988, 1540, 1621
Hsp92I GRCGYC 6 cut(s) 158, 170, 203, 515, 563, 3109
HspAI GCGC 5 cut(s) 170, 203, 563, 2308, 2420
KasI GGCGCC 3 cut(s) 169, 202, 562
Ksp22I TGATCA 1 cut(s) 1192
KspAI GTTAAC 2 cut(s) 64, 2281
KspI CCGCGG 1 cut(s) 2293
LguI GCTCTTC 1 cut(s) 1095
LmnI GCTCC 6 cut(s) 554, 824, 1342, 1421, 1883, 2973
MabI ACCWGGT 2 cut(s) 34, 415
MaeII ACGT 4 cut(s) 478, 988, 1540, 1621
MaeIII GTNAC 5 cut(s) 4, 1247, 2176, 2362, 2656
MboII GAAGA 9 cut(s) 1112, 1375, 1460, 1923, 2672, 2739, 2927, 3166, 3203
MflI RGATCY 4 cut(s) 1014, 2148, 2193, 3154
MhlI GDGCHC 7 cut(s) 373, 829, 1004, 1107, 1888, 2978, 3203
MlsI TGGCCA 1 cut(s) 2445
MluNI TGGCCA 1 cut(s) 2445
Mly113I GGCGCC 3 cut(s) 170, 203, 563
MlyI GAGTC 3 cut(s) 1234, 1775, 2336
MmeI TCCRAC 2 cut(s) 563, 1096
Mox20I TGGCCA 1 cut(s) 2445
Mph1103I ATGCAT 1 cut(s) 588
MroXI GAANNNNTTC 1 cut(s) 253
MscI TGGCCA 1 cut(s) 2445
MseI TTAA 6 cut(s) 63, 2208, 2280, 2465, 2723, 2856
MslI CAYNNNNRTG 3 cut(s) 2435, 2489, 2916
Msp20I TGGCCA 1 cut(s) 2445
MspA1I CMGCKG 5 cut(s) 494, 1433, 1778, 2292, 2516
MspI CCGG 6 cut(s) 11, 167, 200, 206, 245, 318
MspR9I CCNGG 9 cut(s) 21, 36, 186, 246, 366, 417, 456, 2267, 2334
Mva1269I GAATGC 5 cut(s) 768, 1411, 1811, 2310, 2622
MvaI CCWGG 8 cut(s) 21, 36, 186, 366, 417, 456, 2267, 2334
MvnI CGCG 2 cut(s) 871, 2292
NarI GGCGCC 3 cut(s) 170, 203, 563
NciI CCSGG 1 cut(s) 246
NdeI CATATG 1 cut(s) 3217
NmeAIII GCCGAG 1 cut(s) 334
NmuCI GTSAC 2 cut(s) 4, 1247
NsiI ATGCAT 1 cut(s) 588
NspI RCATGY 3 cut(s) 590, 809, 1440
OliI CACNNNNGTG 1 cut(s) 2435
PaeI GCATGC 2 cut(s) 590, 1440
PagI TCATGA 1 cut(s) 1179
PceI AGGCCT 3 cut(s) 184, 253, 2227
PciSI GCTCTTC 1 cut(s) 1095
PcsI WCGNNNNNNNCGW 1 cut(s) 1150
PctI GAATGC 5 cut(s) 768, 1411, 1811, 2310, 2622
PdmI GAANNNNTTC 1 cut(s) 253
PfeI GAWTC 4 cut(s) 106, 884, 1979, 2455
PflMI CCANNNNNTGG 3 cut(s) 365, 1078, 1874
PfoI TCCNGGA 1 cut(s) 244
PinAI ACCGGT 1 cut(s) 317
PleI GAGTC 3 cut(s) 1234, 1775, 2336
PluTI GGCGCC 3 cut(s) 173, 206, 566
PpsI GAGTC 3 cut(s) 1234, 1775, 2336
Ppu21I YACGTR 1 cut(s) 989
PpuMI RGGWCCY 2 cut(s) 1478, 1559
PsiI TTATAA 2 cut(s) 1530, 1611
Psp124BI GAGCTC 2 cut(s) 2978, 3203
Psp5II RGGWCCY 2 cut(s) 1478, 1559
Psp6I CCWGG 8 cut(s) 19, 34, 184, 364, 415, 454, 2265, 2332
PspEI GGTNACC 1 cut(s) 2362
PspFI CCCAGC 2 cut(s) 470, 494
PspGI CCWGG 8 cut(s) 19, 34, 184, 364, 415, 454, 2265, 2332
PspPPI RGGWCCY 2 cut(s) 1478, 1559
PstI CTGCAG 4 cut(s) 983, 1432, 1801, 3054
PstNI CAGNNNCTG 1 cut(s) 422
PsuI RGATCY 4 cut(s) 1014, 2148, 2193, 3154
PvuII CAGCTG 4 cut(s) 494, 1433, 1778, 2516
RsaI GTAC 6 cut(s) 322, 1516, 1597, 2288, 2429, 2734
RsaNI GTAC 6 cut(s) 321, 1515, 1596, 2287, 2428, 2733
RseI CAYNNNNRTG 3 cut(s) 2435, 2489, 2916
SacI GAGCTC 2 cut(s) 2978, 3203
SacII CCGCGG 1 cut(s) 2293
SapI GCTCTTC 1 cut(s) 1095
SaqAI TTAA 6 cut(s) 63, 2208, 2280, 2465, 2723, 2856
SchI GAGTC 3 cut(s) 1234, 1775, 2336
ScrFI CCNGG 9 cut(s) 21, 36, 186, 246, 366, 417, 456, 2267, 2334
SduI GDGCHC 7 cut(s) 373, 829, 1004, 1107, 1888, 2978, 3203
SexAI ACCWGGT 2 cut(s) 34, 415
SfcI CTRYAG 7 cut(s) 298, 979, 1428, 1797, 2316, 2652, 3050
SfoI GGCGCC 3 cut(s) 171, 204, 564
Sfr303I CCGCGG 1 cut(s) 2293
SgrAI CRCCGGYG 1 cut(s) 205
SgrBI CCGCGG 1 cut(s) 2293
SinI GGWCC 8 cut(s) 221, 533, 839, 1069, 1136, 1268, 1478, 1559
SmiMI CAYNNNNRTG 3 cut(s) 2435, 2489, 2916
SmlI CTYRAG 1 cut(s) 2229
SmoI CTYRAG 1 cut(s) 2229
SphI GCATGC 2 cut(s) 590, 1440
SseBI AGGCCT 3 cut(s) 184, 253, 2227
SspDI GGCGCC 3 cut(s) 169, 202, 562
SspI AATATT 1 cut(s) 2218
SstI GAGCTC 2 cut(s) 2978, 3203
StuI AGGCCT 3 cut(s) 184, 253, 2227
StyD4I CCNGG 9 cut(s) 19, 34, 184, 244, 364, 415, 454, 2265, 2332
StyI CCWWGG 5 cut(s) 686, 749, 913, 1077, 1264
TaaI ACNGT 6 cut(s) 338, 1514, 1595, 2437, 2612, 2656
TaiI ACGT 4 cut(s) 481, 991, 1543, 1624
TaqI TCGA 4 cut(s) 155, 2458, 2940, 3203
TatI WGTACW 4 cut(s) 1514, 1595, 2427, 2732
TauI GCSGC 4 cut(s) 121, 214, 520, 523
TfiI GAWTC 4 cut(s) 106, 884, 1979, 2455
Tru1I TTAA 6 cut(s) 63, 2208, 2280, 2465, 2723, 2856
Tru9I TTAA 6 cut(s) 63, 2208, 2280, 2465, 2723, 2856
TseFI GTSAC 2 cut(s) 4, 1247
Tsp45I GTSAC 2 cut(s) 4, 1247
TspGWI ACGGA 3 cut(s) 880, 2582, 2848
Van91I CCANNNNNTGG 3 cut(s) 365, 1078, 1874
VneI GTGCAC 1 cut(s) 1000
VpaK11BI GGWCC 8 cut(s) 221, 533, 839, 1069, 1136, 1268, 1478, 1559
XagI CCTNNNNNAGG 1 cut(s) 414
XapI RAATTY 8 cut(s) 100, 445, 864, 2642, 2928, 3012, 3030, 3249
XceI RCATGY 3 cut(s) 590, 809, 1440
XcmI CCANNNNNNNNNTGG 2 cut(s) 1114, 1262
XmaJI CCTAGG 1 cut(s) 749
XmnI GAANNNNTTC 1 cut(s) 253
Zsp2I ATGCAT 1 cut(s) 588
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.