pycom16g19630

Protein transport protein Sec24-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0000554
Physical Location & Seq
Forward (+)
16807263 .. 16821232
13970 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g19630.14

Sequence Viewer

Length: 3129 bp
ATGCAGCCCCGCCCTGATTCATTAGCCGATAATATGCAGAATATGAATCTTAATCGACCGCCTTCCATGCCTAATTCTGCCCCTCCTAGACCATCCCCTTTCGGCCAACCGCCCCCAGCCCCTCCTGCCGGTGCCGGGAATCCTTCTGTACCACCTCCTTTTTCTCGGCCCGGCCCTCCCCCGGCTGCCTTTGCAAGACCCGCAGCACCAGCACCGCGATCGGGAACCCCGCAGCCAACACTATCCCCAGCCACCACCCCAGTAAGACCCGCCGGGCCGCCGGTTGGCCAGCCTTCCTCTTTCCCGTCTCGACCGCCTCCTGGGTCGTTTCCCCCTGTGGGCGGGGTAGCTTCTGCTTCTGGGCCACCACCAATTGGTCCAATTGGTCCGGCATCAGGTCCTCGCCCAGGTCCTCAGAGCATGCCGCCTACGACTGCACCGGGTGGAATGTTGAGTAATGGGCCACCAATGTTTGGTTACGGTGCTATGCCGGGTGGACCTCGTTTCCCTCCCAGTGGAAATGCACCTCAACCACCTGTTGGACATCCACCAGCAATGGCACCAGCAGCAGCCGCGGGTCCACCACGAACCCCATCCATGCACTCTGTGCTGGGTGGTTCGTTAGTTAGTTCTCCACAAGGTCCTACTGTTCAGCAGCCACCACCATTTTCGGCAGCCCCGCCATTTTCGGCAGCACCTCAAAGCATGCGGCCACCACCTCCAGGCTCTCCCTATGGCTCACAGACATGGCCAGTGCAACAAGGGCAGGTGGCTCCACCTTCTCAATTTCCTGGTTCTGCTCAACCACCTAGAATGTTTGGAATGCCACCCCCAACACTACCAAATCAGTCCATGACTACCATCTCACCTGCTGGTCAAACTGGTACTCCTTCGGCTGGGTCATCCAAGATTGATCGATCATCCACTCAAATTCCTCGGCCTATACCAAGTTCATCGATGCTCATTCATGAAACTCGTCAAGGCAATCAGGCAAATCCACCTCCGCCTGCTACAACTGATTATATAGTCAGAGACACTGGGAATTGCAGTCCACGTTACATGAGGTGCACCATCAATCAGATACCATGCACTGCAGATCTTTTAACAACGTCAGGGATGCCATTAGCTTTGTTGGTTGAACCTTTTGCCCTTCCTCATCCAAATGAGGAACCAATCCAAGTGGTGGATTTCGGTGAAAGTGGTCCTGTTCGATGCTCTCGTTGCAAAGGCTACATAAATCCTTTCATGAAGTTCATTGACCAGGGCAGGAAATTCATCTGTAATCTTTGTGGATTTACTGATGAGACTCCCCGTGACTACCACTGCAATCTTGGTCCAGATGGTAGACGTAGAGATGCTGATGAGAGGCCTGAGCTATGTAGAGGAACAGTTGAATTTGTTGCTTCAAAAGAATACATGGTACGTGATCCCATGCCAGCTGTGTACTTCTTCCTCATTGATGTATCCATGAATGCCATTCAAACTGGTGCAACAGCTGCAGCTTGCAGTGCACTCAGTCAAGTTATTGATGATCTTCCGCCTTTGATGCTTATTGTTCCTGATGTGCAAGATGTTTACACTCCTCTGCAGACTGATGTAGTGGTCCAGCTTTCTGAGTGCCGCCAACATTTGGAGCAATTGTTGGAAAGTATTCCAACCATGTTTCAAAACAGTAAAACTGCTGAATCAGCCTTTGGTGCGGCAATCGAGGCTGCTTTCTTGGCAATTAAGAGTACTGGAGGGAAACTTTTGGTGTTTCAGTCAGTGTTGGCATCAACTGGAATTGGAGCCCTCTCTGCTAGGGAGGCCGAAGGAAGAGCAAATATATCCTCAGCTGAGAAGGAGGCCCATAAATTACTCCAACCAGCTGACAAAACTTTAAAGACAATGGCAATTGAGTTTGCTGAATATCAAGTTTGTGTCGACTTGTTTATCACTACTCAGTCATACATAGACATTGCTTCTATCTCTGTCATCCCAAGAACAACGGGAGGACAGCTTTACTATTACTACCCCTTCTCAGCTGTCTCTGATCGATCAAAGCTCTACATCGATCTTAGATGGAATGTCACAAGGCCTCAAGGTTTTGAGGCGGTGATGCGTGTAAGATGCAGCCAGGGTATTCAAGTTCAAGATTACCATGGAAGCTTTTGCAAACGTATTCCTACGGATGTTGACCTACCTGGGATTGACTGTGACAAAACTATTATGGTGACCTTAAAACATGATGATAAATTACAGGATGGCTCAGAATGTGGTTTCCAGTGTGCTGTTTTATACACAACTGTGTATGGCCAACGGAGAATTCGAGTTGCAACTTTATCTCTGCCATGCACAAGTATGCTAAGTAATTTGTTCCGTGCTGCTGATTTGGACACTCAATTTGCATGTTTCATGAAGCAAGCGGCAAACGAAATTCCTTCAAGTCCCCTCTTGCGTGTACGGGAACAAGTGACAAATCTGTGCATTAGTAGTCTGCTTTCATATCGTAAATTTTGTGCTACGGTATCATCTTCTGGACAGCTTATTTTACCGGAGGCACTGAAGCTCCTGCCTCTATACACCCTTGCATTAATCAAAAGTATGGGGCTACGAACTGATGGAAAAATAGATGAGCGGTCCTTCTGGATCAACCATGTTTCTTCCCTTTCGGTTCCTTTGGCTGTTCCACTAGTGTACCCGAGAATGGTGGCTATTCATGACCTCGAATCCAAAAGGGAGGGAGATGATTCTCTAATACCTCCGGTGATTCCGCTTTCTAGCGAACACGTGCGTGACGAGGGAATTTATCTTCTCGAGAATGGTGAGGACTGTTTAATATATATTGGGAATTTGGTGGATTCTGGAATTTTGCAACAAGTATTTGGAATCACCTCTGCTGATGAACTTCCCACTCAGTTTGTGCTACAGCAGTATGATAATCCATTATCAAAGAAGCTGAATGATGTGGTAAATGAAATACGGCGCCAGAGATGTTCCTACCTTCGCTTAAAATTATGTAAGAAAGGAGATCCATCAGGAACATTGTTTTTCTCATATATGGTCGAAGACCAGAGTCCGAATGGCCCCTCCTACGTTGAATTTCTGGTGCATGTCCATCGGCAAATACAAATAAAAATGGCATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

1043

Amino Acids

112.13

Weight (kDa)

7.15

Isoelectric Point (pI)

56.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000554)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT4G32640 AT4G32640
fragaria_vesca FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000
malus_domestica MD02G1169200.v1.1 MD13G1230500.v1.1 MD15G1281700.v1.1 MD16G1009900.v1.1 MD16G1235300.v1.1
prunus_persica Prupe.1G056500_v2.0.a1 Prupe.1G056500_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1
pyrus_communis pycom02g13590 pycom13g20290 pycom15g24480 pycom16g00970 pycom16g19630
rosa_chinensis RchiOBHm_Chr4g0396591 RchiOBHm_Chr4g0445631
rosa_laevigata RLG00000005723 RLG00000009518
rosa_multiflora Rmu_co8031254.1_g000001 Rmu_co8351119.1_g000001 Rmu_sc0003637.1_g000024 Rmu_sc0010969.1_g000001 Rmu_sc0019383.1_g000002
rosa_roxburghii Rroxscaffold_5G00341440 Rroxscaffold_5G00386110
rosa_rugosa Rorug03G0348600 Rorug03G0348700 Rorug04G0363200 Rorug04G0363300 Rorug04G0363400 Rorug04G0363500
rosa_samantha Rh4AG070600 Rh4AG424700 Rh4AG425100 Rh4BG068500 Rh4BG436900 Rh4CG076300 Rh4CG451400 Rh4DG065600 Rh4DG433400
rosa_wichuraiana Rw4G005630 Rw4G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 757, 877
Acc36I ACCTGC 2 cut(s) 757, 877
AccB1I GGYRCC 3 cut(s) 131, 559, 2964
AccB7I CCANNNNNTGG 5 cut(s) 374, 473, 539, 1183, 1630
AccBSI CCGCTC 1 cut(s) 2617
AccI GTMKAC 2 cut(s) 1345, 1923
AccII CGCG 2 cut(s) 217, 575
AclWI GGATC 3 cut(s) 1421, 2636, 3005
AcoI YGGCCR 5 cut(s) 103, 286, 710, 749, 2293
AcuI CTGAAG 1 cut(s) 2564
AcvI CACGTG 1 cut(s) 2770
AcyI GRCGYC 1 cut(s) 2965
AdeI CACNNNGTG 2 cut(s) 443, 607
AfaI GTAC 7 cut(s) 150, 886, 1422, 1445, 1735, 2442, 2678
AflIII ACRYGT 1 cut(s) 2767
AgsI TTSAA 9 cut(s) 1139, 1394, 1407, 1481, 1667, 2126, 2132, 2424, 3080
AhlI ACTAGT 1 cut(s) 2671
AjnI CCWGG 7 cut(s) 319, 406, 721, 790, 1260, 2115, 2182
AjuI GAANNNNNNNTTGG 4 cut(s) 1677, 1709, 2289, 2321
AleI CACNNNNGTG 2 cut(s) 2285, 2772
Alw21I GWGCWC 2 cut(s) 1070, 1513
Alw26I GTCTC 4 cut(s) 312, 1026, 1298, 2032
Alw44I GTGCAC 2 cut(s) 1066, 1509
AlwI GGATC 3 cut(s) 1421, 2636, 3005
Ama87I CYCGRG 2 cut(s) 2680, 2795
ApaLI GTGCAC 2 cut(s) 1066, 1509
ArsI GACNNNNNNTTYG 2 cut(s) 2366, 2398
AseI ATTAAT 1 cut(s) 2573
Asp700I GAANNNNTTC 1 cut(s) 1650
AspLEI GCGC 1 cut(s) 2967
AsuC2I CCSGG 6 cut(s) 136, 171, 182, 274, 441, 492
AsuHPI GGTGA 7 cut(s) 858, 1205, 2107, 2224, 2758, 2816, 2863
AvaI CYCGRG 2 cut(s) 2680, 2795
BaeGI GKGCMC 2 cut(s) 1070, 1513
BaeI ACNNNNGTAYC 2 cut(s) 2660, 2693
BalI TGGCCA 3 cut(s) 288, 751, 2295
BanI GGYRCC 3 cut(s) 131, 559, 2964
BanII GRGCYC 1 cut(s) 1792
BbrPI CACGTG 1 cut(s) 2770
BbsI GAAGAC 1 cut(s) 3054
Bbv12I GWGCWC 2 cut(s) 1070, 1513
BbvCI CCTCAGC 1 cut(s) 1831
BceAI ACGGC 1 cut(s) 2978
BcgI CGANNNNNNTGC 4 cut(s) 201, 235, 3080, 3114
BciT130I CCWGG 7 cut(s) 321, 408, 723, 792, 1262, 2117, 2184
BciVI GTATCC 1 cut(s) 1474
BcnI CCSGG 6 cut(s) 136, 171, 182, 274, 441, 492
BcoDI GTCTC 4 cut(s) 312, 1026, 1298, 2032
BcuI ACTAGT 1 cut(s) 2671
BfaI CTAG 5 cut(s) 87, 810, 1800, 2672, 2760
BfmI CTRYAG 4 cut(s) 1092, 1497, 1586, 2906
BfoI RGCGCY 1 cut(s) 2968
BfuAI ACCTGC 2 cut(s) 757, 877
BfuI GTATCC 1 cut(s) 1474
BglII AGATCT 1 cut(s) 1096
BmcAI AGTACT 1 cut(s) 1735
BmeT110I CYCGRG 2 cut(s) 2680, 2795
BmrI ACTGGG 3 cut(s) 254, 507, 1047
BmsI GCATC 9 cut(s) 401, 948, 1107, 1202, 1345, 1536, 1781, 2088, 2099
BmuI ACTGGG 3 cut(s) 254, 507, 1047
BoxI GACNNNNGTC 1 cut(s) 3054
BpiI GAAGAC 1 cut(s) 3054
BpmI CTGGAG 2 cut(s) 705, 1758
Bpu10I CCTNAGC 2 cut(s) 1371, 1831
BpuEI CTTGAG 1 cut(s) 2064
BpuMI CCSGG 6 cut(s) 136, 171, 182, 274, 441, 492
Bsa29I ATCGAT 4 cut(s) 916, 956, 2035, 2052
BsaAI YACGTR 2 cut(s) 1424, 2770
BsaHI GRCGYC 1 cut(s) 2965
BsaJI CCNNGG 9 cut(s) 180, 320, 406, 573, 935, 1261, 2116, 2140, 2183
BsaWI WCCGGW 2 cut(s) 2533, 2743
BsaXI ACNNNNNCTCC 6 cut(s) 871, 901, 1625, 1655, 2532, 2562
Bse118I RCCGGY 2 cut(s) 128, 280
Bse1I ACTGG 9 cut(s) 260, 513, 752, 886, 1042, 1489, 1741, 1783, 2263
Bse3DI GCAATG 2 cut(s) 561, 1956
BseBI CCWGG 7 cut(s) 321, 408, 723, 792, 1262, 2117, 2184
BseCI ATCGAT 4 cut(s) 916, 956, 2035, 2052
BseDI CCNNGG 9 cut(s) 180, 320, 406, 573, 935, 1261, 2116, 2140, 2183
BseMI GCAATG 2 cut(s) 561, 1956
BseNI ACTGG 9 cut(s) 260, 513, 752, 886, 1042, 1489, 1741, 1783, 2263
BseRI GAGGAG 1 cut(s) 1572
BseSI GKGCMC 2 cut(s) 1070, 1513
BseYI CCCAGC 4 cut(s) 115, 247, 610, 896
BsgI GTGCAG 1 cut(s) 420
Bsh1236I CGCG 2 cut(s) 217, 575
Bsh1285I CGRYCG 3 cut(s) 59, 221, 314
BshNI GGYRCC 3 cut(s) 131, 559, 2964
BshVI ATCGAT 4 cut(s) 916, 956, 2035, 2052
BsiEI CGRYCG 3 cut(s) 59, 221, 314
BsiHKAI GWGCWC 2 cut(s) 1070, 1513
BsiHKCI CYCGRG 2 cut(s) 2680, 2795
BslFI GGGAC 1 cut(s) 2412
BsmAI GTCTC 4 cut(s) 312, 1026, 1298, 2032
BsmBI CGTCTC 1 cut(s) 312
BsmFI GGGAC 1 cut(s) 2412
BsmI GAATGC 2 cut(s) 828, 1477
BsoBI CYCGRG 2 cut(s) 2680, 2795
Bsp1286I GDGCHC 3 cut(s) 1070, 1513, 1792
Bsp19I CCATGG 1 cut(s) 2140
BspDI ATCGAT 4 cut(s) 916, 956, 2035, 2052
BspFNI CGCG 2 cut(s) 217, 575
BspHI TCATGA 4 cut(s) 967, 1245, 2394, 2698
BspMAI CTGCAG 3 cut(s) 1096, 1501, 1590
BspMI ACCTGC 2 cut(s) 757, 877
BspPI GGATC 3 cut(s) 1421, 2636, 3005
BspQI GCTCTTC 1 cut(s) 1810
BspT107I GGYRCC 3 cut(s) 131, 559, 2964
BsrBI CCGCTC 1 cut(s) 2617
BsrDI GCAATG 2 cut(s) 561, 1956
BsrFI RCCGGY 2 cut(s) 128, 280
BsrI ACTGG 9 cut(s) 260, 513, 752, 886, 1042, 1489, 1741, 1783, 2263
BssAI RCCGGY 2 cut(s) 128, 280
BssECI CCNNGG 9 cut(s) 180, 320, 406, 573, 935, 1261, 2116, 2140, 2183
BssNI GRCGYC 1 cut(s) 2965
BssT1I CCWWGG 1 cut(s) 2140
Bst2UI CCWGG 7 cut(s) 321, 408, 723, 792, 1262, 2117, 2184
Bst4CI ACNGT 8 cut(s) 482, 649, 1390, 1673, 2195, 2287, 2506, 2813
Bst6I CTCTTC 1 cut(s) 1810
BstACI GRCGYC 1 cut(s) 2965
BstAPI GCANNNNNTGC 2 cut(s) 607, 1496
BstBAI YACGTR 2 cut(s) 1424, 2770
BstC8I GCNNGC 7 cut(s) 290, 422, 707, 1008, 1437, 1504, 2403
BstDSI CCRYGG 2 cut(s) 573, 2140
BstEII GGTNACC 1 cut(s) 2212
BstENI CCTNNNNNAGG 1 cut(s) 405
BstFNI CGCG 2 cut(s) 217, 575
BstH2I RGCGCY 1 cut(s) 2968
BstHHI GCGC 1 cut(s) 2967
BstMAI GTCTC 4 cut(s) 312, 1026, 1298, 2032
BstMCI CGRYCG 3 cut(s) 59, 221, 314
BstNI CCWGG 7 cut(s) 321, 408, 723, 792, 1262, 2117, 2184
BstNSI RCATGY 4 cut(s) 424, 709, 2391, 3095
BstPAI GACNNNNGTC 1 cut(s) 3054
BstPI GGTNACC 1 cut(s) 2212
BstSFI CTRYAG 4 cut(s) 1092, 1497, 1586, 2906
BstSLI GKGCMC 2 cut(s) 1070, 1513
BstUI CGCG 2 cut(s) 217, 575
BstV2I GAAGAC 1 cut(s) 3054
BstX2I RGATCY 2 cut(s) 1096, 3010
BstYI RGATCY 2 cut(s) 1096, 3010
Bsu15I ATCGAT 4 cut(s) 916, 956, 2035, 2052
BsuI GTATCC 1 cut(s) 1474
BsuTUI ATCGAT 4 cut(s) 916, 956, 2035, 2052
BtgI CCRYGG 2 cut(s) 573, 2140
BtsI GCAGTG 3 cut(s) 1089, 1321, 1513
BtsIMutI CAGTG 9 cut(s) 520, 759, 1035, 1089, 1321, 1513, 1770, 2270, 2540
BveI ACCTGC 2 cut(s) 757, 877
Cac8I GCNNGC 7 cut(s) 290, 422, 707, 1008, 1437, 1504, 2403
CciI TCATGA 4 cut(s) 967, 1245, 2394, 2698
CfoI GCGC 1 cut(s) 2967
Cfr10I RCCGGY 2 cut(s) 128, 280
Cfr42I CCGCGG 1 cut(s) 576
ClaI ATCGAT 4 cut(s) 916, 956, 2035, 2052
Csp6I GTAC 7 cut(s) 149, 885, 1421, 1444, 1734, 2441, 2677
CspCI CAANNNNNGTGG 4 cut(s) 1161, 1196, 2881, 2916
CviQI GTAC 7 cut(s) 149, 885, 1421, 1444, 1734, 2441, 2677
DinI GGCGCC 1 cut(s) 2966
DraI TTTAAA 1 cut(s) 1881
DraIII CACNNNGTG 2 cut(s) 443, 607
EaeI YGGCCR 5 cut(s) 103, 286, 710, 749, 2293
Eam1104I CTCTTC 1 cut(s) 1810
EarI CTCTTC 1 cut(s) 1810
EciI GGCGGA 2 cut(s) 993, 1527
Eco130I CCWWGG 1 cut(s) 2140
Eco147I AGGCCT 2 cut(s) 1369, 2077
Eco24I GRGCYC 1 cut(s) 1792
Eco57I CTGAAG 1 cut(s) 2564
Eco72I CACGTG 1 cut(s) 2770
Eco88I CYCGRG 2 cut(s) 2680, 2795
Eco91I GGTNACC 1 cut(s) 2212
EcoNI CCTNNNNNAGG 1 cut(s) 405
EcoO109I RGGNCCY 3 cut(s) 398, 410, 641
EcoO65I GGTNACC 1 cut(s) 2212
EcoRI GAATTC 1 cut(s) 2304
EcoRII CCWGG 7 cut(s) 319, 406, 721, 790, 1260, 2115, 2182
EcoT14I CCWWGG 1 cut(s) 2140
EcoT38I GRGCYC 1 cut(s) 1792
EgeI GGCGCC 1 cut(s) 2966
EheI GGCGCC 1 cut(s) 2966
ErhI CCWWGG 1 cut(s) 2140
Esp3I CGTCTC 1 cut(s) 312
FaqI GGGAC 1 cut(s) 2412
FauI CCCGC 7 cut(s) 17, 208, 237, 277, 335, 568, 687
FblI GTMKAC 2 cut(s) 1345, 1923
FriOI GRGCYC 1 cut(s) 1792
FspBI CTAG 5 cut(s) 87, 810, 1800, 2672, 2760
GlaI GCGC 1 cut(s) 2966
GsaI CCCAGC 4 cut(s) 119, 251, 614, 900
GsuI CTGGAG 2 cut(s) 705, 1758
HaeII RGCGCY 1 cut(s) 2968
HhaI GCGC 1 cut(s) 2967
Hin1I GRCGYC 1 cut(s) 2965
Hin6I GCGC 1 cut(s) 2965
HinP1I GCGC 1 cut(s) 2965
HincII GTYRAC 2 cut(s) 1924, 2176
HindII GTYRAC 2 cut(s) 1924, 2176
HindIII AAGCTT 1 cut(s) 2146
HphI GGTGA 7 cut(s) 858, 1205, 2107, 2224, 2758, 2816, 2863
Hpy188I TCNGA 7 cut(s) 417, 1031, 1080, 1615, 2032, 2251, 3060
HpyCH4III ACNGT 8 cut(s) 482, 649, 1390, 1673, 2195, 2287, 2506, 2813
HpyCH4IV ACGT 7 cut(s) 1054, 1109, 1348, 1423, 2158, 2769, 3075
HpySE526I ACGT 7 cut(s) 1054, 1109, 1348, 1423, 2158, 2769, 3075
Hsp92I GRCGYC 1 cut(s) 2965
HspAI GCGC 1 cut(s) 2965
KasI GGCGCC 1 cut(s) 2964
KspI CCGCGG 1 cut(s) 576
LguI GCTCTTC 1 cut(s) 1810
LmnI GCTCC 4 cut(s) 778, 1633, 1787, 2553
LweI GCATC 9 cut(s) 401, 948, 1107, 1202, 1345, 1536, 1781, 2088, 2099
MaeI CTAG 5 cut(s) 87, 810, 1800, 2672, 2760
MaeII ACGT 7 cut(s) 1054, 1109, 1348, 1423, 2158, 2769, 3075
MaeIII GTNAC 8 cut(s) 476, 1055, 1313, 2068, 2195, 2212, 2452, 2774
MbiI CCGCTC 1 cut(s) 2617
MboII GAAGA 7 cut(s) 1441, 1526, 1827, 2505, 2634, 2783, 3059
MfeI CAATTG 4 cut(s) 372, 381, 1637, 1893
MflI RGATCY 2 cut(s) 1096, 3010
MhlI GDGCHC 3 cut(s) 1070, 1513, 1792
MlsI TGGCCA 3 cut(s) 288, 751, 2295
MluNI TGGCCA 3 cut(s) 288, 751, 2295
Mly113I GGCGCC 1 cut(s) 2965
MlyI GAGTC 2 cut(s) 1300, 3064
MmeI TCCRAC 4 cut(s) 520, 1623, 1679, 1885
Mox20I TGGCCA 3 cut(s) 288, 751, 2295
MroXI GAANNNNTTC 1 cut(s) 1650
MscI TGGCCA 3 cut(s) 288, 751, 2295
MseI TTAA 8 cut(s) 51, 1103, 1728, 1880, 2219, 2573, 2816, 2990
MslI CAYNNNNRTG 5 cut(s) 745, 1161, 2285, 2339, 2772
Msp20I TGGCCA 3 cut(s) 288, 751, 2295
MspA1I CMGCKG 6 cut(s) 575, 1439, 1496, 1835, 1868, 2024
MunI CAATTG 4 cut(s) 372, 381, 1637, 1893
Mva1269I GAATGC 2 cut(s) 828, 1477
MvaI CCWGG 7 cut(s) 321, 408, 723, 792, 1262, 2117, 2184
MvnI CGCG 2 cut(s) 217, 575
NarI GGCGCC 1 cut(s) 2965
NciI CCSGG 6 cut(s) 136, 171, 182, 274, 441, 492
NcoI CCATGG 1 cut(s) 2140
NmeAIII GCCGAG 2 cut(s) 145, 916
NmuCI GTSAC 6 cut(s) 1313, 2068, 2195, 2212, 2452, 2774
NspI RCATGY 4 cut(s) 424, 709, 2391, 3095
OliI CACNNNNGTG 2 cut(s) 2285, 2772
PaeI GCATGC 2 cut(s) 424, 709
PaeR7I CTCGAG 1 cut(s) 2795
PagI TCATGA 4 cut(s) 967, 1245, 2394, 2698
PaqCI CACCTGC 2 cut(s) 757, 877
PceI AGGCCT 2 cut(s) 1369, 2077
PciSI GCTCTTC 1 cut(s) 1810
PcsI WCGNNNNNNNCGW 3 cut(s) 1216, 2305, 2775
PctI GAATGC 2 cut(s) 828, 1477
PdmI GAANNNNTTC 1 cut(s) 1650
PfeI GAWTC 9 cut(s) 17, 46, 139, 1685, 2708, 2729, 2749, 2840, 2868
PflMI CCANNNNNTGG 5 cut(s) 374, 473, 539, 1183, 1630
Ple19I CGATCG 1 cut(s) 221
PleI GAGTC 2 cut(s) 1300, 3063
PluTI GGCGCC 1 cut(s) 2968
PmaCI CACGTG 1 cut(s) 2770
PmlI CACGTG 1 cut(s) 2770
PpsI GAGTC 2 cut(s) 1300, 3063
Ppu21I YACGTR 2 cut(s) 1424, 2770
PpuMI RGGWCCY 3 cut(s) 398, 410, 641
PshAI GACNNNNGTC 1 cut(s) 3054
PshBI ATTAAT 1 cut(s) 2573
Psp5II RGGWCCY 3 cut(s) 398, 410, 641
Psp6I CCWGG 7 cut(s) 319, 406, 721, 790, 1260, 2115, 2182
PspCI CACGTG 1 cut(s) 2770
PspEI GGTNACC 1 cut(s) 2212
PspFI CCCAGC 4 cut(s) 115, 247, 610, 896
PspGI CCWGG 7 cut(s) 319, 406, 721, 790, 1260, 2115, 2182
PspPPI RGGWCCY 3 cut(s) 398, 410, 641
PstI CTGCAG 3 cut(s) 1096, 1501, 1590
PsuI RGATCY 2 cut(s) 1096, 3010
PvuI CGATCG 1 cut(s) 221
PvuII CAGCTG 5 cut(s) 1439, 1496, 1835, 1868, 2024
RsaI GTAC 7 cut(s) 150, 886, 1422, 1445, 1735, 2442, 2678
RsaNI GTAC 7 cut(s) 149, 885, 1421, 1444, 1734, 2441, 2677
RseI CAYNNNNRTG 5 cut(s) 745, 1161, 2285, 2339, 2772
SacII CCGCGG 1 cut(s) 576
SalI GTCGAC 1 cut(s) 1922
SapI GCTCTTC 1 cut(s) 1810
SaqAI TTAA 8 cut(s) 51, 1103, 1728, 1880, 2219, 2573, 2816, 2990
ScaI AGTACT 1 cut(s) 1735
SchI GAGTC 2 cut(s) 1300, 3064
SduI GDGCHC 3 cut(s) 1070, 1513, 1792
SfaNI GCATC 9 cut(s) 401, 948, 1107, 1202, 1345, 1536, 1781, 2088, 2099
SfcI CTRYAG 4 cut(s) 1092, 1497, 1586, 2906
SfoI GGCGCC 1 cut(s) 2966
Sfr274I CTCGAG 1 cut(s) 2795
Sfr303I CCGCGG 1 cut(s) 576
SgrBI CCGCGG 1 cut(s) 576
SlaI CTCGAG 1 cut(s) 2795
SmiMI CAYNNNNRTG 5 cut(s) 745, 1161, 2285, 2339, 2772
SmlI CTYRAG 2 cut(s) 2079, 2795
SmoI CTYRAG 2 cut(s) 2079, 2795
SpeI ACTAGT 1 cut(s) 2671
SphI GCATGC 2 cut(s) 424, 709
SseBI AGGCCT 2 cut(s) 1369, 2077
SspDI GGCGCC 1 cut(s) 2964
SspMI CTAG 5 cut(s) 87, 810, 1800, 2672, 2760
StuI AGGCCT 2 cut(s) 1369, 2077
StyI CCWWGG 1 cut(s) 2140
TaaI ACNGT 8 cut(s) 482, 649, 1390, 1673, 2195, 2287, 2506, 2813
TaiI ACGT 7 cut(s) 1057, 1112, 1351, 1426, 2161, 2772, 3078
TatI WGTACW 2 cut(s) 1443, 1733
TauI GCSGC 7 cut(s) 280, 427, 575, 712, 1623, 1703, 2408
TfiI GAWTC 9 cut(s) 17, 46, 139, 1685, 2708, 2729, 2749, 2840, 2868
Tru1I TTAA 8 cut(s) 51, 1103, 1728, 1880, 2219, 2573, 2816, 2990
Tru9I TTAA 8 cut(s) 51, 1103, 1728, 1880, 2219, 2573, 2816, 2990
TscAI CASTG 9 cut(s) 520, 759, 1042, 1096, 1328, 1513, 1770, 2270, 2547
TseFI GTSAC 6 cut(s) 1313, 2068, 2195, 2212, 2452, 2774
Tsp45I GTSAC 6 cut(s) 1313, 2068, 2195, 2212, 2452, 2774
TspGWI ACGGA 3 cut(s) 2183, 2314, 2348
TspRI CASTG 9 cut(s) 520, 759, 1042, 1096, 1328, 1513, 1770, 2270, 2547
Van91I CCANNNNNTGG 5 cut(s) 374, 473, 539, 1183, 1630
VneI GTGCAC 2 cut(s) 1066, 1509
VspI ATTAAT 1 cut(s) 2573
XagI CCTNNNNNAGG 1 cut(s) 405
XceI RCATGY 4 cut(s) 424, 709, 2391, 3095
XcmI CCANNNNNNNNNTGG 2 cut(s) 1328, 3059
XhoI CTCGAG 1 cut(s) 2795
XmiI GTMKAC 2 cut(s) 1345, 1923
XmnI GAANNNNTTC 1 cut(s) 1650
XspI CTAG 5 cut(s) 87, 810, 1800, 2672, 2760
ZrmI AGTACT 1 cut(s) 1735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.