MD02G1169200.v1.1

Protein transport protein Sec24-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000554
Physical Location & Seq
Forward (+)
14532359 .. 14545569
13211 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1169200.v1.1.491

Sequence Viewer

Length: 3342 bp
ATGGCGGCTCTTGTGCGTCCCACAGGGGCACCTAGGCCCAATAATAGTAACACTAACGCCCCACCACCCCCTAATTACAGTCCTAACAATGCTCAGAGGGATCCCGATTCGTTAGCTGGAAATATGCAGAATTTGAATCTTAATAGGCAGCCTTCCATGCCTAATTCTGCCTCTAGACCATCCCCTATTGGCCAAGCACCGCCTTTTCATTCGTCAGTCCCTCCTGCTGGGGCTCCTGTTGCACCTCCCCCTTTTCCGCGGCCTGGCCCTTCCCCCGCTGCGCTTGCAAGACCCGCGGCACCTCGATCAGGATCCCTACAACCAACATTATCCCCTGCCACCACCCCAGCAAGGTCAACTGGGCCTCCTGTTGGCCAGCCTTCGTCTTTTGTGTCTAGACCGCCTCCTGGGTCGTTTCCCCTTGTGGGTGGGGTAGCTCCAGCTTCTGGGCCACCACCTGGTCCCTTTCATACGTCAGGTTTACCGAGCGGTCCAGTTTCAGTACCGCCACCAGCATCAGGTCCTCGCCCAGGTCCTGGTTCTTTTCCTTTGGGTAGCGGTCAGAGCATGCCTCCTACGACTGCACCAGGTAGATTGATGAGTAATGGGCCACCGGTGTTTGGTTCTGGAGCTATGTCGGGTGGGCCTCGTTTCCCTCCAAGTGGAAATGCACCTCAACCACCTTTTGGACATCCACCAACAGTGGCAAGGGCAACAGGTCCTCCTCGAATGCCAACCATGCACTCTATGCTAGGCACTCCAGCAGTTAGTGCTTCACCAGGTCCTGTTCAGCAGGCACCACCATTTTCAGCAGCACCACCATTTTCAGCGGCACCACCAAGCATGCAGGCACCTCCGGTTTCTCCCTATGGCTCACAGACATGGCCAATGCAACAAGGGCAGGTGGCTCCACCTTACCAATTTACTGGTTCTGTTCAGTCACCCAGAATGTTTGGAATGCCACCCCCACCACTACCAAATCAGTCCATGGCTACTATCTCACCTGCCGTTGGTCAAACTGGATCTCCTTTTACTGGGTCATCGAAGATAGATCCGAATCAAATTCCTCGGCCTGTACCAGGTTCGTCGGTGCTCATCCATGAAACTCGTCAGGGCAATCAGGCAAATCCACCTCCGCCTGCTACAAGTGATTATATTGTCAGAGACAATGGGAATTGCAGTCCACGTTACATGAGGTGTACCATCAATCAGATACCATGCACGGCTGATCTTTTGACAACATCAGGGATGCCCTTAGCTTTGTTGGTTGAACCATTTGCCCTTCCTCATCCAGATGAAGAACCAATCCAAGTTGTGGATTTTGGTGAAAGTGGTCCTGTTCGATGCTCTCGTTGCAAAGGCTACATAAATCCTTTCATGAAGTTCATTGACCAGGGCAGGAAATTCATTTGTAACCTGTGTGGATTTACTGATGAGACTCCCCGTGACTACCACTGCAATCTTGGTCCAGATGGTAGACGTAGAGATGCTGATGAAAGGCCTGAGCTATGTAGAGGAACAGTTGAATTTGTTGCTTCAAAAGAATACATGGTGCGTGATCCCATGCCAGCTGTGTACTTCTTTCTCATTGATGTGTCCATGAATGCCATTCAAACTGGTGCAACTGCTGCAGCTTGCAGTGCAATCAGTCAAGTTATTGCTGACCTTCCTGAAGGTCCTCGGACAATGGTGGGAGTTGCAACATTTGATGCAACAATCCATTTTTACAATTTGAAACGTGCACTGCAGCAGCCTTTGATGCTTATTGTTCCTGATGTGCAAGATGTTTACACTCCTCTGGAGACTGATGTGGTTGTTCAGCTCTCAGAGTGCCGTCAACATTTGGAGCAATTGTTGGAAAGTATTCCCACCATGTTTCAAAATAGTAAAACTGCTGAATCAGCCTTTGGTGCAGCAATCAAGGCTGCTTTCTTGGCAATGAAGAGTACCGGAGGGAAACTTTTGGTGTTTCAGTCAGTGCTGGCCTCAACTGGAATTGGAGCCCTCTCTGCTAGAGAGGCTGAAGGAAGGGCTAATATATCTTCAGCTGAGAAGGAGGCCCATAAATTACTCCAACCAGCAGACAAAACTTTAAAGGCAATGGCAATTGAATTGGCTGAATTTCAGGTGTGTGTCGACTTATTTATCACTACCCAGTCATACATAGACATTGCTTCAATCTCTGTCATCCCAAGAACAACTGGAGGGCAGGTTTACTATTATTACCCCTTCTCAGCTGTCTCTGATCCTGCGAAGCTCTACAATGATCTTAGATGGAATGTCACAAGACCTCAAGGTTTTGAGGGGGTGATGCGTGTACGATGCAGCCAGGGTATTCAAGTTCAAGAGTACCATGGGAGCTTTTGCAAACGTATCCCTACGGATGTTGACGTACCTGGGATTGACTCTGATAAAACTATTATGGTGACCTTAAAACATGATGATAAATTACAGGATGGCTCAGAATGTGGTTTCCAGTGTGCCCTTTTATACACAACTGTGTATGGCCAACGGAGAATTCGAGTTACAACTTTGTCTCTGCCATGCACAAGTATGCTAAGTAATCTGTTTCGTGCTGCTGATTTGGACACTCAATTTGCGTGTTTCATGAAGCAAGCGGCAAATGAAATTCCTTCAAGTGCTCTCTTGCGTGTACGGGAACAAGTTACAAATCTGTGCATCAGTAGTCTTCTGTCGTATCGTAAATTTTGTGCTACTGTATCATCATCTGGACAGCTTATTCTTCCGGAGGCACTGAAGCTCCTGCCTCTATACACCCTTGCATTAATCAAAAGTACAGGGCTACGAAGTGATGGAAAAATAGATGAGCGGTCCTTCTGGATCAACCATGTTTCTTCCCTTTCTGTTCCTTTGGCAGTTCCACTGGTGTACCCCAGAATGGTGGCCATTCATGATCTCGAATCCAAAAAGGAGGGTGATGAATCTCCATTTCCTCCGGTGATTCCACTTTCCAGCGAACACGTGAGTGATGCGGGAATTTATCTTCTTGAAAATGGTGACGACTGTTTAATATATATTGGGAATTCGGTGGATCCTGGAATTTTGCAGCAACTGTTTGGAATCTCCTCTGCTAATGAACTTCCTACTCAGTTTGTGCTGCAGCAGTATGATAATCCGTTATCGAAGAAGCTGAATGATGTGGTAAATGAAATACGGCGCCAGAGATGTTCCTACCTTCGGTTAAAATTGTGTCGGAAAGGAGATCCGTCAGGAGCATTGTTTTTGTCATGCTTGGTGGAAGACCAGAGTCCGAATGGCCCCTCCTATGTTGAGTTTCTGGTACATGTCCATCGGCAAATACAGATGAAAATGGCGTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

1114

Amino Acids

119.24

Weight (kDa)

8.07

Isoelectric Point (pI)

55.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-Sec23_Sec24 PF04810 446 - 484 1.5e-16 Sec23/Sec24 zinc finger
Sec23_trunk PF04811 521 - 761 5.3e-79 Sec23/Sec24 trunk domain
Sec23_BS PF08033 766 - 850 9.9e-27 Sec23/Sec24 beta-sandwich domain
Sec23_helical PF04815 861 - 959 2.5e-24 Sec23/Sec24 helical domain
Gelsolin PF00626 985 - 1052 4e-08 Gelsolin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000554)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT4G32640 AT4G32640
fragaria_vesca FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000
malus_domestica MD02G1169200.v1.1 MD13G1230500.v1.1 MD15G1281700.v1.1 MD16G1009900.v1.1 MD16G1235300.v1.1
prunus_persica Prupe.1G056500_v2.0.a1 Prupe.1G056500_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1
pyrus_communis pycom02g13590 pycom13g20290 pycom15g24480 pycom16g00970 pycom16g19630
rosa_chinensis RchiOBHm_Chr4g0396591 RchiOBHm_Chr4g0445631
rosa_laevigata RLG00000005723 RLG00000009518
rosa_multiflora Rmu_co8031254.1_g000001 Rmu_co8351119.1_g000001 Rmu_sc0003637.1_g000024 Rmu_sc0010969.1_g000001 Rmu_sc0019383.1_g000002
rosa_roxburghii Rroxscaffold_5G00341440 Rroxscaffold_5G00386110
rosa_rugosa Rorug03G0348600 Rorug03G0348700 Rorug04G0363200 Rorug04G0363300 Rorug04G0363400 Rorug04G0363500
rosa_samantha Rh4AG070600 Rh4AG424700 Rh4AG425100 Rh4BG068500 Rh4BG436900 Rh4CG076300 Rh4CG451400 Rh4DG065600 Rh4DG433400
rosa_wichuraiana Rw4G005630 Rw4G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 892, 1012
Acc36I ACCTGC 3 cut(s) 892, 1012, 2200
AccB1I GGYRCC 6 cut(s) 28, 298, 796, 832, 850, 3177
AccB7I CCANNNNNTGG 5 cut(s) 446, 458, 536, 686, 1315
AccBSI CCGCTC 2 cut(s) 489, 2830
AccI GTMKAC 2 cut(s) 1477, 2136
AccII CGCG 2 cut(s) 259, 296
AccIII TCCGGA 1 cut(s) 2746
AcoI YGGCCR 5 cut(s) 190, 373, 884, 2506, 2904
AcuI CTGAAG 4 cut(s) 1692, 2028, 2043, 2777
AcvI CACGTG 1 cut(s) 2983
AcyI GRCGYC 2 cut(s) 3178, 3335
AflIII ACRYGT 2 cut(s) 2980, 3304
AgeI ACCGGT 1 cut(s) 613
AjuI GAANNNNNNNTTGG 4 cut(s) 1890, 1922, 2502, 2534
AleI CACNNNNGTG 2 cut(s) 2498, 2985
Alw21I GWGCWC 3 cut(s) 1095, 1744, 2644
Alw26I GTCTC 5 cut(s) 1158, 1430, 1796, 2245, 2541
Alw44I GTGCAC 1 cut(s) 1740
AlwNI CAGNNNCTG 4 cut(s) 446, 536, 785, 3073
Aor13HI TCCGGA 1 cut(s) 2746
ApaLI GTGCAC 1 cut(s) 1740
ArsI GACNNNNNNTTYG 2 cut(s) 2579, 2611
AseI ATTAAT 1 cut(s) 2786
AsiGI ACCGGT 1 cut(s) 613
Asp700I GAANNNNTTC 1 cut(s) 1863
AspA2I CCTAGG 1 cut(s) 32
AspLEI GCGC 2 cut(s) 283, 3180
AsuHPI GGTGA 9 cut(s) 768, 933, 993, 1337, 2320, 2437, 2948, 2971, 3029
AvrII CCTAGG 1 cut(s) 32
BaeGI GKGCMC 3 cut(s) 31, 1744, 2485
BaeI ACNNNNGTAYC 2 cut(s) 2873, 2906
BalI TGGCCA 5 cut(s) 192, 375, 886, 2508, 2906
BamHI GGATCC 3 cut(s) 100, 311, 3052
BanI GGYRCC 6 cut(s) 28, 298, 796, 832, 850, 3177
BanII GRGCYC 2 cut(s) 235, 2005
BbrPI CACGTG 1 cut(s) 2983
BbsI GAAGAC 2 cut(s) 2681, 3267
Bbv12I GWGCWC 3 cut(s) 1095, 1744, 2644
BccI CCATC 7 cut(s) 187, 1211, 1466, 2268, 2450, 2807, 3318
BceAI ACGGC 4 cut(s) 992, 1239, 1818, 3191
BciVI GTATCC 1 cut(s) 2384
BcoDI GTCTC 5 cut(s) 1158, 1430, 1796, 2245, 2541
BfaI CTAG 5 cut(s) 33, 174, 396, 752, 2013
BfmI CTRYAG 3 cut(s) 1629, 1745, 3119
BfoI RGCGCY 1 cut(s) 3181
BfuAI ACCTGC 3 cut(s) 892, 1012, 2200
BfuI GTATCC 1 cut(s) 2384
BlnI CCTAGG 1 cut(s) 32
BmrI ACTGGG 3 cut(s) 369, 1044, 2149
BmuI ACTGGG 3 cut(s) 369, 1044, 2149
BoxI GACNNNNGTC 1 cut(s) 3267
BpiI GAAGAC 2 cut(s) 2681, 3267
BplI GAGNNNNNCTC 2 cut(s) 556, 588
BpmI CTGGAG 5 cut(s) 423, 648, 744, 1820, 2223
Bpu10I CCTNAGC 2 cut(s) 1255, 1503
BpuEI CTTGAG 1 cut(s) 2277
BsaAI YACGTR 1 cut(s) 2983
BsaBI GATNNNNATC 2 cut(s) 310, 1056
BsaHI GRCGYC 2 cut(s) 3178, 3335
BsaWI WCCGGW 5 cut(s) 613, 856, 1949, 2746, 2956
Bse118I RCCGGY 1 cut(s) 613
Bse3DI GCAATG 3 cut(s) 1944, 2106, 2169
Bse8I GATNNNNATC 2 cut(s) 310, 1056
BseAI TCCGGA 1 cut(s) 2746
BseGI GGATG 8 cut(s) 179, 691, 1095, 1254, 1288, 2187, 2389, 2461
BseJI GATNNNNATC 2 cut(s) 310, 1056
BseMI GCAATG 3 cut(s) 1944, 2106, 2169
BseMII CTCAG 7 cut(s) 107, 1494, 1839, 2040, 2247, 2475, 3122
BseRI GAGGAG 3 cut(s) 714, 1785, 3076
BseSI GKGCMC 3 cut(s) 31, 1744, 2485
BseYI CCCAGC 2 cut(s) 227, 346
BsgI GTGCAG 2 cut(s) 567, 1932
Bsh1236I CGCG 2 cut(s) 259, 296
BshNI GGYRCC 6 cut(s) 28, 298, 796, 832, 850, 3177
BshTI ACCGGT 1 cut(s) 613
BsiHKAI GWGCWC 3 cut(s) 1095, 1744, 2644
BsiSI CCGG 5 cut(s) 614, 857, 1950, 2747, 2957
BslFI GGGAC 3 cut(s) 3, 203, 447
BsmAI GTCTC 5 cut(s) 1158, 1430, 1796, 2245, 2541
BsmFI GGGAC 3 cut(s) 3, 203, 447
BsmI GAATGC 3 cut(s) 735, 963, 1609
Bsp1286I GDGCHC 7 cut(s) 31, 235, 1095, 1744, 2005, 2485, 2644
Bsp13I TCCGGA 1 cut(s) 2746
Bsp19I CCATGG 2 cut(s) 987, 2353
BspCNI CTCAG 7 cut(s) 106, 1495, 1838, 2041, 2246, 2474, 3121
BspEI TCCGGA 1 cut(s) 2746
BspFNI CGCG 2 cut(s) 259, 296
BspHI TCATGA 3 cut(s) 1377, 2607, 2911
BspMAI CTGCAG 3 cut(s) 1633, 1749, 3123
BspMI ACCTGC 3 cut(s) 892, 1012, 2200
BspT107I GGYRCC 6 cut(s) 28, 298, 796, 832, 850, 3177
BsrBI CCGCTC 2 cut(s) 489, 2830
BsrDI GCAATG 3 cut(s) 1944, 2106, 2169
BsrFI RCCGGY 1 cut(s) 613
BssAI RCCGGY 1 cut(s) 613
BssNI GRCGYC 2 cut(s) 3178, 3335
BssT1I CCWWGG 3 cut(s) 32, 987, 2353
Bst4CI ACNGT 7 cut(s) 80, 703, 1522, 2500, 2719, 3026, 3075
Bst6I CTCTTC 1 cut(s) 1937
BstACI GRCGYC 2 cut(s) 3178, 3335
BstAPI GCANNNNNTGC 3 cut(s) 748, 770, 1628
BstBAI YACGTR 1 cut(s) 2983
BstDSI CCRYGG 4 cut(s) 257, 294, 987, 2353
BstEII GGTNACC 1 cut(s) 2425
BstENI CCTNNNNNAGG 3 cut(s) 306, 528, 1077
BstF5I GGATG 8 cut(s) 179, 691, 1095, 1254, 1288, 2187, 2389, 2461
BstFNI CGCG 2 cut(s) 259, 296
BstH2I RGCGCY 1 cut(s) 3181
BstHHI GCGC 2 cut(s) 283, 3180
BstMAI GTCTC 5 cut(s) 1158, 1430, 1796, 2245, 2541
BstNSI RCATGY 3 cut(s) 571, 847, 3308
BstPAI GACNNNNGTC 1 cut(s) 3267
BstPI GGTNACC 1 cut(s) 2425
BstSFI CTRYAG 3 cut(s) 1629, 1745, 3119
BstSLI GKGCMC 3 cut(s) 31, 1744, 2485
BstUI CGCG 2 cut(s) 259, 296
BstV2I GAAGAC 2 cut(s) 2681, 3267
BstX2I RGATCY 6 cut(s) 100, 311, 1022, 1051, 3052, 3223
BstXI CCANNNNNNTGG 2 cut(s) 926, 2902
BstYI RGATCY 6 cut(s) 100, 311, 1022, 1051, 3052, 3223
BsuI GTATCC 1 cut(s) 2384
BtgI CCRYGG 4 cut(s) 257, 294, 987, 2353
BtsCI GGATG 8 cut(s) 179, 691, 1095, 1254, 1288, 2187, 2389, 2461
BtsI GCAGTG 3 cut(s) 1453, 1645, 1742
BtsIMutI CAGTG 8 cut(s) 708, 1453, 1645, 1742, 1983, 2483, 2753, 2882
BveI ACCTGC 3 cut(s) 892, 1012, 2200
CaiI CAGNNNCTG 4 cut(s) 446, 536, 785, 3073
CciI TCATGA 3 cut(s) 1377, 2607, 2911
CfoI GCGC 2 cut(s) 283, 3180
Cfr10I RCCGGY 1 cut(s) 613
Cfr42I CCGCGG 2 cut(s) 260, 297
CseI GACGC 2 cut(s) 5, 3324
CsiI ACCWGGT 4 cut(s) 457, 586, 778, 1078
CspAI ACCGGT 1 cut(s) 613
DinI GGCGCC 1 cut(s) 3179
DraI TTTAAA 1 cut(s) 2094
EaeI YGGCCR 5 cut(s) 190, 373, 884, 2506, 2904
Eam1104I CTCTTC 1 cut(s) 1937
EarI CTCTTC 1 cut(s) 1937
EciI GGCGGA 1 cut(s) 1125
Eco130I CCWWGG 3 cut(s) 32, 987, 2353
Eco147I AGGCCT 1 cut(s) 1501
Eco24I GRGCYC 2 cut(s) 235, 2005
Eco57I CTGAAG 4 cut(s) 1692, 2028, 2043, 2777
Eco72I CACGTG 1 cut(s) 2983
Eco91I GGTNACC 1 cut(s) 2425
EcoNI CCTNNNNNAGG 3 cut(s) 306, 528, 1077
EcoO109I RGGNCCY 5 cut(s) 521, 533, 719, 782, 1676
EcoO65I GGTNACC 1 cut(s) 2425
EcoRI GAATTC 2 cut(s) 2517, 3043
EcoT14I CCWWGG 3 cut(s) 32, 987, 2353
EcoT38I GRGCYC 2 cut(s) 235, 2005
EgeI GGCGCC 1 cut(s) 3179
EheI GGCGCC 1 cut(s) 3179
ErhI CCWWGG 3 cut(s) 32, 987, 2353
FaqI GGGAC 3 cut(s) 3, 203, 447
FauI CCCGC 3 cut(s) 283, 301, 2986
FblI GTMKAC 2 cut(s) 1477, 2136
FokI GGATG 8 cut(s) 166, 678, 1082, 1261, 1275, 2174, 2396, 2468
FriOI GRGCYC 2 cut(s) 235, 2005
FspBI CTAG 5 cut(s) 33, 174, 396, 752, 2013
GlaI GCGC 2 cut(s) 282, 3179
GsaI CCCAGC 2 cut(s) 231, 350
GsuI CTGGAG 5 cut(s) 423, 648, 744, 1820, 2223
HaeII RGCGCY 1 cut(s) 3181
HapII CCGG 5 cut(s) 614, 857, 1950, 2747, 2957
HgaI GACGC 2 cut(s) 5, 3324
HhaI GCGC 2 cut(s) 283, 3180
Hin1I GRCGYC 2 cut(s) 3178, 3335
Hin6I GCGC 2 cut(s) 281, 3178
HinP1I GCGC 2 cut(s) 281, 3178
HincII GTYRAC 4 cut(s) 357, 1838, 2137, 2389
HindII GTYRAC 4 cut(s) 357, 1838, 2137, 2389
HpaII CCGG 5 cut(s) 614, 857, 1950, 2747, 2957
HphI GGTGA 9 cut(s) 768, 933, 993, 1337, 2320, 2437, 2948, 2971, 3029
Hpy99I CGWCG 1 cut(s) 1090
HpyCH4III ACNGT 7 cut(s) 80, 703, 1522, 2500, 2719, 3026, 3075
HpyCH4IV ACGT 7 cut(s) 473, 1186, 1480, 1738, 2371, 2391, 2982
HpySE526I ACGT 7 cut(s) 473, 1186, 1480, 1738, 2371, 2391, 2982
Hsp92I GRCGYC 2 cut(s) 3178, 3335
HspAI GCGC 2 cut(s) 281, 3178
KasI GGCGCC 1 cut(s) 3177
Kpn2I TCCGGA 1 cut(s) 2746
KspI CCGCGG 2 cut(s) 260, 297
LmnI GCTCC 9 cut(s) 238, 442, 629, 913, 1846, 2000, 2358, 2766, 3233
MabI ACCWGGT 4 cut(s) 457, 586, 778, 1078
MaeI CTAG 5 cut(s) 33, 174, 396, 752, 2013
MaeII ACGT 7 cut(s) 473, 1186, 1480, 1738, 2371, 2391, 2982
MbiI CCGCTC 2 cut(s) 489, 2830
MfeI CAATTG 2 cut(s) 1850, 2106
MflI RGATCY 6 cut(s) 100, 311, 1022, 1051, 3052, 3223
MhlI GDGCHC 7 cut(s) 31, 235, 1095, 1744, 2005, 2485, 2644
MlsI TGGCCA 5 cut(s) 192, 375, 886, 2508, 2906
MluNI TGGCCA 5 cut(s) 192, 375, 886, 2508, 2906
Mly113I GGCGCC 1 cut(s) 3178
MlyI GAGTC 3 cut(s) 1432, 2399, 3277
MmeI TCCRAC 3 cut(s) 1836, 2098, 3194
Mox20I TGGCCA 5 cut(s) 192, 375, 886, 2508, 2906
MroI TCCGGA 1 cut(s) 2746
MroXI GAANNNNTTC 1 cut(s) 1863
MscI TGGCCA 5 cut(s) 192, 375, 886, 2508, 2906
MseI TTAA 6 cut(s) 141, 2093, 2432, 2786, 3029, 3203
MslI CAYNNNNRTG 6 cut(s) 880, 1293, 1592, 2498, 2552, 2985
Msp20I TGGCCA 5 cut(s) 192, 375, 886, 2508, 2906
MspA1I CMGCKG 7 cut(s) 259, 278, 296, 830, 1571, 2048, 2237
MspI CCGG 5 cut(s) 614, 857, 1950, 2747, 2957
MunI CAATTG 2 cut(s) 1850, 2106
Mva1269I GAATGC 3 cut(s) 735, 963, 1609
MvnI CGCG 2 cut(s) 259, 296
NarI GGCGCC 1 cut(s) 3178
NcoI CCATGG 2 cut(s) 987, 2353
NmeAIII GCCGAG 1 cut(s) 1048
NmuCI GTSAC 5 cut(s) 939, 1445, 2281, 2425, 3017
NspI RCATGY 3 cut(s) 571, 847, 3308
OliI CACNNNNGTG 2 cut(s) 2498, 2985
PaeI GCATGC 2 cut(s) 571, 847
PagI TCATGA 3 cut(s) 1377, 2607, 2911
PaqCI CACCTGC 2 cut(s) 892, 1012
PceI AGGCCT 1 cut(s) 1501
PciI ACATGT 1 cut(s) 3304
PcsI WCGNNNNNNNCGW 2 cut(s) 1348, 2518
PctI GAATGC 3 cut(s) 735, 963, 1609
PdmI GAANNNNTTC 1 cut(s) 1863
PfeI GAWTC 8 cut(s) 107, 136, 1057, 1898, 2921, 2942, 2962, 3081
PflMI CCANNNNNTGG 5 cut(s) 446, 458, 536, 686, 1315
PfoI TCCNGGA 1 cut(s) 3055
PinAI ACCGGT 1 cut(s) 613
PleI GAGTC 3 cut(s) 1432, 2399, 3276
PluTI GGCGCC 1 cut(s) 3181
PmaCI CACGTG 1 cut(s) 2983
PmlI CACGTG 1 cut(s) 2983
PpsI GAGTC 3 cut(s) 1432, 2399, 3276
Ppu21I YACGTR 1 cut(s) 2983
PpuMI RGGWCCY 5 cut(s) 521, 533, 719, 782, 1676
PscI ACATGT 1 cut(s) 3304
PshAI GACNNNNGTC 1 cut(s) 3267
PshBI ATTAAT 1 cut(s) 2786
Psp5II RGGWCCY 5 cut(s) 521, 533, 719, 782, 1676
PspCI CACGTG 1 cut(s) 2983
PspEI GGTNACC 1 cut(s) 2425
PspFI CCCAGC 2 cut(s) 227, 346
PspPPI RGGWCCY 5 cut(s) 521, 533, 719, 782, 1676
PstI CTGCAG 3 cut(s) 1633, 1749, 3123
PstNI CAGNNNCTG 4 cut(s) 446, 536, 785, 3073
PsuI RGATCY 6 cut(s) 100, 311, 1022, 1051, 3052, 3223
PvuII CAGCTG 3 cut(s) 1571, 2048, 2237
RseI CAYNNNNRTG 6 cut(s) 880, 1293, 1592, 2498, 2552, 2985
SacII CCGCGG 2 cut(s) 260, 297
SalI GTCGAC 1 cut(s) 2135
SaqAI TTAA 6 cut(s) 141, 2093, 2432, 2786, 3029, 3203
SchI GAGTC 3 cut(s) 1432, 2399, 3277
SduI GDGCHC 7 cut(s) 31, 235, 1095, 1744, 2005, 2485, 2644
SexAI ACCWGGT 4 cut(s) 457, 586, 778, 1078
SfcI CTRYAG 3 cut(s) 1629, 1745, 3119
SfoI GGCGCC 1 cut(s) 3179
Sfr303I CCGCGG 2 cut(s) 260, 297
SgrAI CRCCGGYG 1 cut(s) 613
SgrBI CCGCGG 2 cut(s) 260, 297
SmiMI CAYNNNNRTG 6 cut(s) 880, 1293, 1592, 2498, 2552, 2985
SmlI CTYRAG 1 cut(s) 2292
SmoI CTYRAG 1 cut(s) 2292
SphI GCATGC 2 cut(s) 571, 847
SseBI AGGCCT 1 cut(s) 1501
SspDI GGCGCC 1 cut(s) 3177
SspMI CTAG 5 cut(s) 33, 174, 396, 752, 2013
StuI AGGCCT 1 cut(s) 1501
StyI CCWWGG 3 cut(s) 32, 987, 2353
TaaI ACNGT 7 cut(s) 80, 703, 1522, 2500, 2719, 3026, 3075
TaiI ACGT 7 cut(s) 476, 1189, 1483, 1741, 2374, 2394, 2985
TaqI TCGA 8 cut(s) 304, 727, 1043, 1342, 2136, 2521, 2919, 3143
TatI WGTACW 2 cut(s) 1575, 2795
TauI GCSGC 5 cut(s) 8, 262, 299, 833, 2621
TfiI GAWTC 8 cut(s) 107, 136, 1057, 1898, 2921, 2942, 2962, 3081
Tru1I TTAA 6 cut(s) 141, 2093, 2432, 2786, 3029, 3203
Tru9I TTAA 6 cut(s) 141, 2093, 2432, 2786, 3029, 3203
TscAI CASTG 8 cut(s) 708, 1460, 1645, 1749, 1983, 2483, 2760, 2889
TseFI GTSAC 5 cut(s) 939, 1445, 2281, 2425, 3017
Tsp45I GTSAC 5 cut(s) 939, 1445, 2281, 2425, 3017
TspGWI ACGGA 4 cut(s) 2396, 2527, 3126, 3216
TspRI CASTG 8 cut(s) 708, 1460, 1645, 1749, 1983, 2483, 2760, 2889
Van91I CCANNNNNTGG 5 cut(s) 446, 458, 536, 686, 1315
VneI GTGCAC 1 cut(s) 1740
VspI ATTAAT 1 cut(s) 2786
XagI CCTNNNNNAGG 3 cut(s) 306, 528, 1077
XbaI TCTAGA 2 cut(s) 173, 395
XceI RCATGY 3 cut(s) 571, 847, 3308
XcmI CCANNNNNNNNNTGG 2 cut(s) 1460, 3272
XmaJI CCTAGG 1 cut(s) 32
XmiI GTMKAC 2 cut(s) 1477, 2136
XmnI GAANNNNTTC 1 cut(s) 1863
XspI CTAG 5 cut(s) 33, 174, 396, 752, 2013
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.