Rh4BG068500

Protein transport protein Sec24-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0000554
Physical Location & Seq
Reverse (-)
12219379 .. 12234618
15240 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG068500.1

Sequence Viewer

Length: 2859 bp
ATGGCAGCTTTTGTGCCTCCTCCAGGGGCACCTAGGCCCAATAACAGTAACACTCCACCAGGGGCACCGCCCCCAAATTACAACCCTAACAATGCTCAGAGAAACCCCGATTCGTTATCCGGTAACATGCAGAATTTGAATCTTAATCGCCAGCAGTCTCCTCCCATGCCCAATTCTGCTCCTAGACCATCATCATCATCATCATCATCATCATCATCATCCCCTTTTGGCCAACCGCCGCCCTTCCAGTCATCACCGCCTCCCCCGGGGGCACCTGGTGCTTCTGCGCCTTATTCTCGGCCTGGCCCTCCCCCGGCCAGACCTGCAGCACCCCGTCCACAAGCAACATTACCCCCTGGCACCGCCGCAGTAAGACCTACTGGCCCACCTGTTGGCCAGTCTTCACCGTTTGGGTCTAGACCGCCCCCTGGGGCTTTTCCTCCTGGGGTAGCTCCTACTTCTGGCCCAGCTTCCAGTCCTTTCCAGACAACGGGTTTGCCAAGTGGTCCAGGTTCAACGCCACCACCGCCTTCGTCAGGTCCTCGCCCTGGTCCTGGGCCGTTCGCTAGCGGTCAGGCTGTGCCCCCTATGGGCGCACCGGGTAGAATGAGTAATGGGCCACCGGTCTTTGGTTCTGGGGCTGTGCCAGGTGGACCTCGTTTTCCTCCAACTGGAAATTTACCTCAACCACCTGTTGGATCTTCACCAACTTCAGTGGCTCCTCCACGTGCTCCAACCATGCATTCGGTGCTCGGTGGTCCAGCAGTCGGTGCTCCACCAGGATCTACTGCCCAACAAGCACCGCCATTTTCGTCAGGTCCTCAAGGCATGCGGCCTCCTCCTCCTGGTTCTCCTTATAGCCCACAGTCATGGCCAATGCAACAAGGGGTGGCTCAACCTCCACAATTTCCTGGGTCTGCTCCACCTCCACAATTTCCTGGCTCTGCTCCACCCCCACAATTTCCTGGCTCTTCTCCACCCCCACAATTTCCTGGCTCTGCTCAACCACCTAGAATGTATGGAATGCCACCACAACCGCTGCCAAATCAGTCCATGACTACCATCTCATCGGCTGTTGGTCAAACTGGAACTCCTATGGCTGGGTCATCAAAGATTGATCCCAATCAAATTCCTCGGCCTGGACCAAGTTCTTCAGTACTTCTGCATGAAACTCGTCAGGCCAATCAAGCAAATCCACCTCCGCCTGCTACAAGTGATTATATCGTCAGAGACACTGGGAATTGCAGTCCACGTTACATGAGGTGCACCATCAATCAGATACCATGCACTGCTGATCTTTTGACAACATCAGGGATGCCGTTAGCTTTGTTGGTTGAACCTTTTGCCCTTCCTCATCCATCTGAGGAACCAATCCAAATTGTAGATTTTGGTGAAAGTGGCCCTGTTCGATGTTCTCGTTGCAAAGGCTACATAAATCCTTTCATGAGGTTCATAGACCAGGGCAGGCAATTCATCTGCAATTTGTGTGGATTTACTGATGAGACTCCCCGCGACTACCACTGCAATCTAGGTCCAGATGGCAGACGTAGAGATGCTGATGATCGGCCTGAGCTATGTAGGGGAACAGTTGAATTTGTTGCCTCAAAAGAATACATGGTGCGTGATCCCATGCCAGCTGTGTACTTCTTCCTTATCGATGTATCCATGAATGCCATTCAAACTGGTGCAACTGCTGCAGCTTGCAGCGCAATCAATCAAGTTATTGCTGATCTTCCTGAAGGTCCTCGGACAAGGGTGGGGATAGCGACATTTGACTCGACAATCCATTTTTACAATTTGAAACGTGCACTGCAGCAGCCTTTGATGCTTATTGTTCCTGATGTACAAGATGTTTACACTCCTCTAGAGACTGATGTAGTTGTTCAGCTTTCCGAGTGCCGTCAACATTTGGAGCAATTGCTGGAAAGTATTCCAACTATGTTTCAGAATAGTAAAACTGCTGAATCAGCTTTTGGTGCAGCAATCAAGGCTGCTTTCTTGGCAATAAAGAGTACTGGAGGGAAACTTTTGGTGTTTCAGTCAGTGTTGCCATCAACTGGAATTGGAGCGCTTTCAGCTAGAGAGGCTGAAGGAAGAGCTAATATATCTTCAGCTGAGAAGGAGCCCAATAAATTACTCCAGCCCGTGGACAAAACTTTAAAGACATTGGCAATTGAATTTGCTGAATATCAGGTTTGCGTTGATTTATTTATCACTACCCAGTCATACATAGATATTGCTTCTATCTCAGTCATCCCCAGAACAACCGGAGGGCAGGTTTACTATTATTATCCCTTCTCAGCTCTCTCTGATCCTGCAAAGCTATATAATGATCTTAGATGGAATGTCACAAGGCCGCAAGGTTTTGAGGCAGTGATGCGTGTAAGATGCAGCCAGGGTATTCAAGTTCAAGAGTACTTTGGAAACTTTTGCAAACGCATTCCAACAGATGTCGACCTACCTGGGATTGACTGTGACAAAACTATTATGGTAATGTTAAAGCATGATGACAAATTACAGGATGGCTCAGAATGTTCTTTCCAGTGTGCTGTTTTATACACAACTGTGTATGGCCAACGGAGAATTCGGGTTACCACTTTGTCTCTGCCATGCACTAGTATGCTAAGTAATCTGTTTCGCGCTGCTGATTTGGACACTCAGTTTTCATGTTACATGAAGCAAGGTATACAAATATGCTATTTTTCATTAGTTCTCTATACTTTTGTTGCATTTGTTATGGATGTTTTCCCACTTTATGGTTGTACAAATATGCTATTTTTCATTAGTGCTCTCTACTTCTGTTGCATTTGTTATGCATGTTTTCCCACTTTATGGTTATTGTTTTCCAATATGTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

952

Amino Acids

101.48

Weight (kDa)

8.3

Isoelectric Point (pI)

60.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-Sec23_Sec24 PF04810 468 - 506 2.8e-16 Sec23/Sec24 zinc finger
Sec23_trunk PF04811 543 - 783 3e-80 Sec23/Sec24 trunk domain
Sec23_BS PF08033 788 - 872 1.1e-27 Sec23/Sec24 beta-sandwich domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000554)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT4G32640 AT4G32640
fragaria_vesca FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000
malus_domestica MD02G1169200.v1.1 MD13G1230500.v1.1 MD15G1281700.v1.1 MD16G1009900.v1.1 MD16G1235300.v1.1
prunus_persica Prupe.1G056500_v2.0.a1 Prupe.1G056500_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1
pyrus_communis pycom02g13590 pycom13g20290 pycom15g24480 pycom16g00970 pycom16g19630
rosa_chinensis RchiOBHm_Chr4g0396591 RchiOBHm_Chr4g0445631
rosa_laevigata RLG00000005723 RLG00000009518
rosa_multiflora Rmu_co8031254.1_g000001 Rmu_co8351119.1_g000001 Rmu_sc0003637.1_g000024 Rmu_sc0010969.1_g000001 Rmu_sc0019383.1_g000002
rosa_roxburghii Rroxscaffold_5G00341440 Rroxscaffold_5G00386110
rosa_rugosa Rorug03G0348600 Rorug03G0348700 Rorug04G0363200 Rorug04G0363300 Rorug04G0363400 Rorug04G0363500
rosa_samantha Rh4AG070600 Rh4AG424700 Rh4AG425100 Rh4BG068500 Rh4BG436900 Rh4CG076300 Rh4CG451400 Rh4DG065600 Rh4DG433400
rosa_wichuraiana Rw4G005630 Rw4G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 331, 2266
AccB1I GGYRCC 4 cut(s) 28, 64, 271, 359
AccB7I CCANNNNNTGG 7 cut(s) 392, 695, 2057, 2146, 2756, 2832, 2853
AccI GTMKAC 2 cut(s) 2454, 2686
AccII CGCG 2 cut(s) 1512, 2640
AclWI GGATC 5 cut(s) 706, 790, 1112, 1619, 2306
AcoI YGGCCR 5 cut(s) 229, 315, 394, 872, 2572
AcsI RAATTY 6 cut(s) 133, 676, 1128, 1592, 2177, 2583
AcuI CTGAAG 5 cut(s) 696, 1137, 1758, 2094, 2109
AcvI CACGTG 1 cut(s) 728
AdeI CACNNNGTG 1 cut(s) 278
AfaI GTAC 6 cut(s) 1158, 1643, 1845, 2014, 2417, 2764
AfeI AGCGCT 1 cut(s) 2070
AgeI ACCGGT 1 cut(s) 622
AgsI TTSAA 9 cut(s) 139, 516, 1337, 1592, 1679, 1801, 2177, 2405, 2411
AhlI ACTAGT 1 cut(s) 2615
AjuI GAANNNNNNNTTGG 6 cut(s) 727, 759, 1956, 1988, 2568, 2600
AleI CACNNNNGTG 1 cut(s) 2564
Alw21I GWGCWC 6 cut(s) 733, 753, 775, 1268, 1810, 2791
Alw26I GTCTC 5 cut(s) 162, 1224, 1496, 1862, 2607
Alw44I GTGCAC 2 cut(s) 1264, 1806
AlwI GGATC 5 cut(s) 706, 790, 1112, 1619, 2306
Ama87I CYCGRG 1 cut(s) 265
Aor51HI AGCGCT 1 cut(s) 2070
ApaLI GTGCAC 2 cut(s) 1264, 1806
ApoI RAATTY 6 cut(s) 133, 676, 1128, 1592, 2177, 2583
ArsI GACNNNNNNTTYG 2 cut(s) 478, 510
AsiGI ACCGGT 1 cut(s) 622
Asp700I GAANNNNTTC 1 cut(s) 1929
AspA2I CCTAGG 1 cut(s) 32
AspLEI GCGC 5 cut(s) 289, 596, 1709, 2071, 2642
AsuC2I CCSGG 4 cut(s) 266, 267, 314, 600
AsuHPI GGTGA 4 cut(s) 246, 396, 696, 1403
AsuNHI GCTAGC 1 cut(s) 566
AvaI CYCGRG 1 cut(s) 265
AvaII GGWCC 9 cut(s) 506, 539, 551, 653, 758, 818, 1142, 1532, 1742
AvrII CCTAGG 1 cut(s) 32
BaeGI GKGCMC 6 cut(s) 31, 67, 274, 585, 1268, 1810
BalI TGGCCA 4 cut(s) 231, 396, 874, 2574
BanI GGYRCC 4 cut(s) 28, 64, 271, 359
BanII GRGCYC 1 cut(s) 2127
BbrPI CACGTG 1 cut(s) 728
BbsI GAAGAC 1 cut(s) 393
Bbv12I GWGCWC 6 cut(s) 733, 753, 775, 1268, 1810, 2791
BccI CCATC 8 cut(s) 196, 1070, 1277, 1366, 1532, 2059, 2334, 2516
BceAI ACGGC 3 cut(s) 544, 1303, 1884
BcgI CGANNNNNNTGC 2 cut(s) 1154, 1188
BciVI GTATCC 1 cut(s) 1672
BcnI CCSGG 4 cut(s) 266, 267, 314, 600
BcoDI GTCTC 5 cut(s) 162, 1224, 1496, 1862, 2607
BcuI ACTAGT 1 cut(s) 2615
BfaI CTAG 9 cut(s) 33, 183, 417, 567, 1011, 1529, 1865, 2079, 2616
BfmI CTRYAG 3 cut(s) 324, 1695, 1811
BfoI RGCGCY 1 cut(s) 2072
BfuAI ACCTGC 2 cut(s) 331, 2266
BfuI GTATCC 1 cut(s) 1672
BlnI CCTAGG 1 cut(s) 32
BmcAI AGTACT 3 cut(s) 1158, 2014, 2417
Bme18I GGWCC 9 cut(s) 506, 539, 551, 653, 758, 818, 1142, 1532, 1742
BmeT110I CYCGRG 1 cut(s) 265
BmiI GGNNCC 7 cut(s) 30, 66, 273, 361, 720, 1368, 2124
BmrI ACTGGG 2 cut(s) 1245, 2215
BmsI GCATC 5 cut(s) 1305, 1543, 1815, 2367, 2378
BmtI GCTAGC 1 cut(s) 570
BmuI ACTGGG 2 cut(s) 1245, 2215
BpiI GAAGAC 1 cut(s) 393
BpmI CTGGAG 3 cut(s) 6, 2037, 2123
Bpu10I CCTNAGC 1 cut(s) 1569
BpuEI CTTGAG 1 cut(s) 807
BpuMI CCSGG 4 cut(s) 266, 267, 314, 600
Bsa29I ATCGAT 1 cut(s) 1656
BsaAI YACGTR 1 cut(s) 728
BsaBI GATNNNNATC 1 cut(s) 1122
BsaWI WCCGGW 3 cut(s) 119, 622, 2267
BsaXI ACNNNNNCTCC 4 cut(s) 1075, 1105, 2262, 2292
Bse118I RCCGGY 1 cut(s) 622
Bse8I GATNNNNATC 1 cut(s) 1122
BseCI ATCGAT 1 cut(s) 1656
BseGI GGATG 6 cut(s) 218, 1320, 1354, 2253, 2527, 2746
BseJI GATNNNNATC 1 cut(s) 1122
BseMII CTCAG 8 cut(s) 110, 1353, 1560, 2106, 2262, 2313, 2541, 2672
BseRI GAGGAG 6 cut(s) 9, 150, 711, 828, 831, 1851
BseSI GKGCMC 6 cut(s) 31, 67, 274, 585, 1268, 1810
BseYI CCCAGC 2 cut(s) 466, 1100
BsgI GTGCAG 1 cut(s) 1998
Bsh1236I CGCG 2 cut(s) 1512, 2640
BshNI GGYRCC 4 cut(s) 28, 64, 271, 359
BshTI ACCGGT 1 cut(s) 622
BshVI ATCGAT 1 cut(s) 1656
BsiHKAI GWGCWC 6 cut(s) 733, 753, 775, 1268, 1810, 2791
BsiHKCI CYCGRG 1 cut(s) 265
BsiSI CCGG 6 cut(s) 120, 266, 314, 599, 623, 2268
BsmAI GTCTC 5 cut(s) 162, 1224, 1496, 1862, 2607
BsmI GAATGC 4 cut(s) 742, 1029, 1675, 2439
BsoBI CYCGRG 1 cut(s) 265
Bsp1407I TGTACA 2 cut(s) 1843, 2762
Bsp143I GATC 9 cut(s) 698, 782, 1117, 1294, 1561, 1624, 1729, 2311, 2332
BspCNI CTCAG 8 cut(s) 109, 1354, 1561, 2107, 2261, 2312, 2540, 2671
BspDI ATCGAT 1 cut(s) 1656
BspFNI CGCG 2 cut(s) 1512, 2640
BspHI TCATGA 1 cut(s) 1443
BspLI GGNNCC 7 cut(s) 30, 66, 273, 361, 720, 1368, 2124
BspMAI CTGCAG 3 cut(s) 328, 1699, 1815
BspMI ACCTGC 2 cut(s) 331, 2266
BspOI GCTAGC 1 cut(s) 570
BspPI GGATC 5 cut(s) 706, 790, 1112, 1619, 2306
BspQI GCTCTTC 2 cut(s) 976, 2089
BspT107I GGYRCC 4 cut(s) 28, 64, 271, 359
BsrFI RCCGGY 1 cut(s) 622
BsrGI TGTACA 2 cut(s) 1843, 2762
BssAI RCCGGY 1 cut(s) 622
BssMI GATC 9 cut(s) 698, 782, 1117, 1294, 1561, 1624, 1729, 2311, 2332
BssNAI GTATAC 1 cut(s) 2687
BssT1I CCWWGG 1 cut(s) 32
Bst1107I GTATAC 1 cut(s) 2687
Bst4CI ACNGT 6 cut(s) 47, 408, 867, 1588, 2474, 2566
Bst6I CTCTTC 2 cut(s) 976, 2089
BstAPI GCANNNNNTGC 4 cut(s) 278, 748, 770, 1694
BstAUI TGTACA 2 cut(s) 1843, 2762
BstBAI YACGTR 1 cut(s) 728
BstC8I GCNNGC 7 cut(s) 152, 568, 830, 1206, 1466, 1635, 1702
BstDSI CCRYGG 1 cut(s) 2145
BstEII GGTNACC 1 cut(s) 2590
BstENI CCTNNNNNAGG 2 cut(s) 21, 534
BstF5I GGATG 6 cut(s) 218, 1320, 1354, 2253, 2527, 2746
BstFNI CGCG 2 cut(s) 1512, 2640
BstH2I RGCGCY 1 cut(s) 2072
BstHHI GCGC 5 cut(s) 289, 596, 1709, 2071, 2642
BstKTI GATC 9 cut(s) 701, 785, 1120, 1297, 1564, 1627, 1732, 2314, 2335
BstMAI GTCTC 5 cut(s) 162, 1224, 1496, 1862, 2607
BstMBI GATC 9 cut(s) 698, 782, 1117, 1294, 1561, 1624, 1729, 2311, 2332
BstNSI RCATGY 3 cut(s) 130, 832, 2820
BstPI GGTNACC 1 cut(s) 2590
BstSFI CTRYAG 3 cut(s) 324, 1695, 1811
BstSLI GKGCMC 6 cut(s) 31, 67, 274, 585, 1268, 1810
BstUI CGCG 2 cut(s) 1512, 2640
BstV2I GAAGAC 1 cut(s) 393
BstX2I RGATCY 2 cut(s) 698, 782
BstXI CCANNNNNNTGG 1 cut(s) 870
BstYI RGATCY 2 cut(s) 698, 782
BstZ17I GTATAC 1 cut(s) 2687
Bsu15I ATCGAT 1 cut(s) 1656
BsuI GTATCC 1 cut(s) 1672
BsuTUI ATCGAT 1 cut(s) 1656
BtgI CCRYGG 1 cut(s) 2145
BtsCI GGATG 6 cut(s) 218, 1320, 1354, 2253, 2527, 2746
BtsI GCAGTG 4 cut(s) 1287, 1519, 1808, 2379
BtsIMutI CAGTG 8 cut(s) 720, 1233, 1287, 1519, 1808, 2049, 2379, 2549
BveI ACCTGC 2 cut(s) 331, 2266
Cac8I GCNNGC 7 cut(s) 152, 568, 830, 1206, 1466, 1635, 1702
CciI TCATGA 1 cut(s) 1443
CfoI GCGC 5 cut(s) 289, 596, 1709, 2071, 2642
Cfr10I RCCGGY 1 cut(s) 622
Cfr9I CCCGGG 1 cut(s) 265
ClaI ATCGAT 1 cut(s) 1656
CsiI ACCWGGT 1 cut(s) 274
Csp6I GTAC 6 cut(s) 1157, 1642, 1844, 2013, 2416, 2763
CspAI ACCGGT 1 cut(s) 622
CspCI CAANNNNNGTGG 4 cut(s) 696, 731, 1468, 1503
CviQI GTAC 6 cut(s) 1157, 1642, 1844, 2013, 2416, 2763
DpnI GATC 9 cut(s) 700, 784, 1119, 1296, 1563, 1626, 1731, 2313, 2334
DpnII GATC 9 cut(s) 698, 782, 1117, 1294, 1561, 1624, 1729, 2311, 2332
DraI TTTAAA 1 cut(s) 2160
DraIII CACNNNGTG 1 cut(s) 278
EaeI YGGCCR 5 cut(s) 229, 315, 394, 872, 2572
Eam1104I CTCTTC 2 cut(s) 976, 2089
EarI CTCTTC 2 cut(s) 976, 2089
EciI GGCGGA 1 cut(s) 1191
Eco130I CCWWGG 1 cut(s) 32
Eco24I GRGCYC 1 cut(s) 2127
Eco47I GGWCC 9 cut(s) 506, 539, 551, 653, 758, 818, 1142, 1532, 1742
Eco47III AGCGCT 1 cut(s) 2070
Eco57I CTGAAG 5 cut(s) 696, 1137, 1758, 2094, 2109
Eco72I CACGTG 1 cut(s) 728
Eco88I CYCGRG 1 cut(s) 265
Eco91I GGTNACC 1 cut(s) 2590
EcoNI CCTNNNNNAGG 2 cut(s) 21, 534
EcoO109I RGGNCCY 3 cut(s) 539, 818, 1742
EcoO65I GGTNACC 1 cut(s) 2590
EcoRI GAATTC 1 cut(s) 2583
EcoT14I CCWWGG 1 cut(s) 32
EcoT22I ATGCAT 2 cut(s) 744, 2818
EcoT38I GRGCYC 1 cut(s) 2127
ErhI CCWWGG 1 cut(s) 32
FauI CCCGC 1 cut(s) 1517
FblI GTMKAC 2 cut(s) 2454, 2686
FokI GGATG 6 cut(s) 205, 1327, 1341, 2240, 2534, 2753
FriOI GRGCYC 1 cut(s) 2127
FspBI CTAG 9 cut(s) 33, 183, 417, 567, 1011, 1529, 1865, 2079, 2616
GlaI GCGC 5 cut(s) 288, 595, 1708, 2070, 2641
GsaI CCCAGC 2 cut(s) 470, 1104
GsuI CTGGAG 3 cut(s) 6, 2037, 2123
HaeII RGCGCY 1 cut(s) 2072
HapII CCGG 6 cut(s) 120, 266, 314, 599, 623, 2268
HhaI GCGC 5 cut(s) 289, 596, 1709, 2071, 2642
Hin6I GCGC 5 cut(s) 287, 594, 1707, 2069, 2640
HinP1I GCGC 5 cut(s) 287, 594, 1707, 2069, 2640
HincII GTYRAC 2 cut(s) 1904, 2455
HindII GTYRAC 2 cut(s) 1904, 2455
HinfI GANTC 5 cut(s) 110, 139, 1504, 1775, 1964
HpaII CCGG 6 cut(s) 120, 266, 314, 599, 623, 2268
HphI GGTGA 4 cut(s) 246, 396, 696, 1403
Hpy188I TCNGA 9 cut(s) 99, 1229, 1278, 1363, 1749, 1894, 1947, 2311, 2530
Hpy188III TCNNGA 8 cut(s) 417, 484, 1444, 1535, 1736, 1838, 1865, 2411
HpyAV CCTTC 7 cut(s) 253, 540, 1358, 1733, 2084, 2113, 2305
HpyCH4III ACNGT 6 cut(s) 47, 408, 867, 1588, 2474, 2566
HpyCH4IV ACGT 4 cut(s) 727, 1252, 1546, 1804
HpySE526I ACGT 4 cut(s) 727, 1252, 1546, 1804
HspAI GCGC 5 cut(s) 287, 594, 1707, 2069, 2640
Kzo9I GATC 9 cut(s) 698, 782, 1117, 1294, 1561, 1624, 1729, 2311, 2332
LguI GCTCTTC 2 cut(s) 976, 2089
LweI GCATC 5 cut(s) 1305, 1543, 1815, 2367, 2378
MabI ACCWGGT 1 cut(s) 274
MaeI CTAG 9 cut(s) 33, 183, 417, 567, 1011, 1529, 1865, 2079, 2616
MaeII ACGT 4 cut(s) 727, 1252, 1546, 1804
MaeIII GTNAC 7 cut(s) 47, 122, 1253, 2347, 2474, 2590, 2669
MalI GATC 9 cut(s) 700, 784, 1119, 1296, 1563, 1626, 1731, 2313, 2334
MboI GATC 9 cut(s) 698, 782, 1117, 1294, 1561, 1624, 1729, 2311, 2332
MboII GAAGA 8 cut(s) 393, 693, 963, 1143, 1639, 1724, 2100, 2106
MfeI CAATTG 2 cut(s) 1916, 2172
MflI RGATCY 2 cut(s) 698, 782
MlsI TGGCCA 4 cut(s) 231, 396, 874, 2574
MluNI TGGCCA 4 cut(s) 231, 396, 874, 2574
MlyI GAGTC 2 cut(s) 1498, 1769
MmeI TCCRAC 5 cut(s) 676, 692, 758, 1958, 2468
Mox20I TGGCCA 4 cut(s) 231, 396, 874, 2574
Mph1103I ATGCAT 2 cut(s) 744, 2818
MroXI GAANNNNTTC 1 cut(s) 1929
MscI TGGCCA 4 cut(s) 231, 396, 874, 2574
MseI TTAA 3 cut(s) 144, 2159, 2498
MslI CAYNNNNRTG 3 cut(s) 868, 2564, 2618
Msp20I TGGCCA 4 cut(s) 231, 396, 874, 2574
MspA1I CMGCKG 3 cut(s) 1039, 1637, 2114
MspI CCGG 6 cut(s) 120, 266, 314, 599, 623, 2268
MunI CAATTG 2 cut(s) 1916, 2172
Mva1269I GAATGC 4 cut(s) 742, 1029, 1675, 2439
MvnI CGCG 2 cut(s) 1512, 2640
NciI CCSGG 4 cut(s) 266, 267, 314, 600
NdeII GATC 9 cut(s) 698, 782, 1117, 1294, 1561, 1624, 1729, 2311, 2332
NheI GCTAGC 1 cut(s) 566
NlaIV GGNNCC 7 cut(s) 30, 66, 273, 361, 720, 1368, 2124
NmeAIII GCCGAG 2 cut(s) 277, 1114
NmuCI GTSAC 2 cut(s) 2347, 2474
NsiI ATGCAT 2 cut(s) 744, 2818
NspI RCATGY 3 cut(s) 130, 832, 2820
OliI CACNNNNGTG 1 cut(s) 2564
PaeI GCATGC 1 cut(s) 832
PagI TCATGA 1 cut(s) 1443
PasI CCCWGGG 1 cut(s) 428
PciSI GCTCTTC 2 cut(s) 976, 2089
PcsI WCGNNNNNNNCGW 1 cut(s) 1414
PctI GAATGC 4 cut(s) 742, 1029, 1675, 2439
PdmI GAANNNNTTC 1 cut(s) 1929
PfeI GAWTC 3 cut(s) 110, 139, 1964
PflMI CCANNNNNTGG 7 cut(s) 392, 695, 2057, 2146, 2756, 2832, 2853
PinAI ACCGGT 1 cut(s) 622
PleI GAGTC 2 cut(s) 1498, 1769
PmaCI CACGTG 1 cut(s) 728
PmlI CACGTG 1 cut(s) 728
PpsI GAGTC 2 cut(s) 1498, 1769
Ppu21I YACGTR 1 cut(s) 728
PpuMI RGGWCCY 3 cut(s) 539, 818, 1742
Psp5II RGGWCCY 3 cut(s) 539, 818, 1742
PspCI CACGTG 1 cut(s) 728
PspEI GGTNACC 1 cut(s) 2590
PspFI CCCAGC 2 cut(s) 466, 1100
PspN4I GGNNCC 7 cut(s) 30, 66, 273, 361, 720, 1368, 2124
PspPPI RGGWCCY 3 cut(s) 539, 818, 1742
PstI CTGCAG 3 cut(s) 328, 1699, 1815
PsuI RGATCY 2 cut(s) 698, 782
PvuII CAGCTG 2 cut(s) 1637, 2114
RsaI GTAC 6 cut(s) 1158, 1643, 1845, 2014, 2417, 2764
RsaNI GTAC 6 cut(s) 1157, 1642, 1844, 2013, 2416, 2763
RseI CAYNNNNRTG 3 cut(s) 868, 2564, 2618
SalI GTCGAC 1 cut(s) 2453
SapI GCTCTTC 2 cut(s) 976, 2089
SaqAI TTAA 3 cut(s) 144, 2159, 2498
Sau3AI GATC 9 cut(s) 698, 782, 1117, 1294, 1561, 1624, 1729, 2311, 2332
ScaI AGTACT 3 cut(s) 1158, 2014, 2417
SchI GAGTC 2 cut(s) 1498, 1769
SexAI ACCWGGT 1 cut(s) 274
SfaNI GCATC 5 cut(s) 1305, 1543, 1815, 2367, 2378
SfcI CTRYAG 3 cut(s) 324, 1695, 1811
SinI GGWCC 9 cut(s) 506, 539, 551, 653, 758, 818, 1142, 1532, 1742
SmaI CCCGGG 1 cut(s) 267
SmiMI CAYNNNNRTG 3 cut(s) 868, 2564, 2618
SmlI CTYRAG 1 cut(s) 822
SmoI CTYRAG 1 cut(s) 822
SpeI ACTAGT 1 cut(s) 2615
SphI GCATGC 1 cut(s) 832
SspMI CTAG 9 cut(s) 33, 183, 417, 567, 1011, 1529, 1865, 2079, 2616
StyI CCWWGG 1 cut(s) 32
TaaI ACNGT 6 cut(s) 47, 408, 867, 1588, 2474, 2566
TaiI ACGT 4 cut(s) 730, 1255, 1549, 1807
TaqI TCGA 4 cut(s) 1408, 1656, 1778, 2454
TatI WGTACW 6 cut(s) 1156, 1641, 1843, 2012, 2415, 2762
TauI GCSGC 4 cut(s) 241, 368, 835, 2359
TfiI GAWTC 3 cut(s) 110, 139, 1964
Tru1I TTAA 3 cut(s) 144, 2159, 2498
Tru9I TTAA 3 cut(s) 144, 2159, 2498
TscAI CASTG 8 cut(s) 720, 1240, 1294, 1526, 1815, 2049, 2379, 2549
TseFI GTSAC 2 cut(s) 2347, 2474
Tsp45I GTSAC 2 cut(s) 2347, 2474
TspDTI ATGAA 9 cut(s) 1182, 1432, 1441, 1462, 1682, 2655, 2690, 2694, 2770
TspGWI ACGGA 1 cut(s) 2593
TspMI CCCGGG 1 cut(s) 265
TspRI CASTG 8 cut(s) 720, 1240, 1294, 1526, 1815, 2049, 2379, 2549
Van91I CCANNNNNTGG 7 cut(s) 392, 695, 2057, 2146, 2756, 2832, 2853
VneI GTGCAC 2 cut(s) 1264, 1806
VpaK11BI GGWCC 9 cut(s) 506, 539, 551, 653, 758, 818, 1142, 1532, 1742
XagI CCTNNNNNAGG 2 cut(s) 21, 534
XapI RAATTY 6 cut(s) 133, 676, 1128, 1592, 2177, 2583
XbaI TCTAGA 2 cut(s) 416, 1864
XceI RCATGY 3 cut(s) 130, 832, 2820
XmaI CCCGGG 1 cut(s) 265
XmaJI CCTAGG 1 cut(s) 32
XmiI GTMKAC 2 cut(s) 2454, 2686
XmnI GAANNNNTTC 1 cut(s) 1929
XspI CTAG 9 cut(s) 33, 183, 417, 567, 1011, 1529, 1865, 2079, 2616
ZrmI AGTACT 3 cut(s) 1158, 2014, 2417
Zsp2I ATGCAT 2 cut(s) 744, 2818
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.