RchiOBHm_Chr4g0396591

Protein transport protein Sec24-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000554
Physical Location & Seq
Reverse (-)
12719015 .. 12733340
14326 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36896

Sequence Viewer

Length: 3360 bp
ATGGCAGCTTTTGTGCCTCCTCCAGGGGCACCTAGGCCCAATAACAGTAACACTCCACCAGGGGCACCGCCCCCAAATTACAACCCTAACAATGCTCAGAGAAACCCCGATTCGTTATCCGGTAACATGCAGAATTTGAATCTTAATCGCCAGCAGTCTCCTCCCATGCCCAATTCTGCTCCTAGACCATCATCATCATCCCCTTTTGGCCAACCGCCGCCCTTCCAGTCATCACCGCCTCCCCCGGGGGCACCTGGTGCTTCTGCGCCATATTCTCGGCCTGGCCCTCCCCCGGCGAGACCTGCAGCACCCCGTCCACAAGCAACATTACCCCCTGGCACCGCCGCAGTAAGACCTACTGGCCCACCTGTTGGCCAGTCTTCACCTTTTGGGTCTAGACCGCCTCCTGGGGCTTTTCCTCCTGGGGTAGCTCCTACTTCTGGCCCAGCTTCCAGTCCTTTCCAGACAACGGGTTTGCCAAGTGGTCCAGGTTCAATGCCACCACCGCCTTCATCAGGTCCTCGCCCTGGTCCTGGGCCGTTCGCTAGCGGTCAGGCTGTGCCCCCTATGGGCGCACCTGGTAGAATGAGTAATGGGCCACCGGTCTTTGGTTCTGGGGCTGTGCCAGGTGGACCTCGTTTTCCTCCAACTGGAAATTTACCTCAACCACCTGTTGGATCTTCACCAACTTCAGTTGCTCCTCCTCGTGCTCCAACCATGCATTCGGTGCTCGGTGGTCCAGCAGTTGGTGCTCCACCAGGATCTACCGCCCAACAAGCACCGCCATTTTCGTCAGGTCCTCAAGGCATGCGGCCTCCTCCTCCTGGTTCTCCTTATAGCCCACAGTCATGGCCAATGCAACAAGGGGTGGCTCAACGTCCACAATTTCCTGGGTCTGCTCCACCCCCACAATTTCCTGGCTCTGCTCCACCCCCACAATTTCCTGGCTCTGCTCAACCACCTAGAATGTATGGAATGCCACCACAACCGCTGCCAAATCAGTCCATGACTACCATCTCATCGGCTGTTGGTCAAACTGGAACTCCTATGGCTGGGTCATCAAAGATTGATCCCAATCAAATTCCTCGGCCTGGACCAAGTTCTTCAGTACTTCTGCATGAAACTCGTCAGGCCAATCAAGCAAATCCACCTCCGCCTGCTACAAGTGATTATATCGTCAGAGACACTGGGAATTGCAGTCCACGTTACATGAGGTGCACCATCAATCAGATACCATGCACTGCTGATCTTTTGACAACATCAGGGATGCCATTAGCTTTGTTGGTTGAACCTTTTGCCCTTCCTCATCCATCTGAGGAACCAATCCAAATTGTAGATTTTGGTGAAAGTGGCCCTGTTCGATGTTCTCGTTGCAAAGGCTACATAAATCCTTTCATGAGGTTCATTGACCAGGGCAGGCAATTCATCTGCAATTTGTGTGGATTTACTGATGAGACTCCCCGCGACTACCACTGCAATCTAGGTCCAGATGGCAGACGTAGAGATGCTGATGATCGGCCTGAGCTATGTAGGGGAACAGTTGAATTTGTTGCCTCAAAAGAATACATGGTGCGTGATCCCATGCCAGCTGTGTACTTCTTCCTTATCGATGTATCCATGAATGCCATTCAAACTGGTGCAACTGCTGCAGCTTGCAGCGCAATCAATCAAGTTATTGCTGATCTTCCTGAAGGTCCTCGGACAAGGGTGGGGATAGCGACATTTGACTCGACAATCCATTTTTACAATTTGAAACGTGCACTGCAGCAGCCTTTGATGCTTATTGTTCCTGATGTACAAGATGTTTACACTCCTCTAGAGACTGATGTAGTTGTTCAGCTTTCCGAGTGCCGTCAACATTTGGAGCAATTGCTGGAAAGTATTCCAACTATGTTTCAGAATAGTAAAACTGCTGAATCAGCTTTTGGTGCAGCAATCAAGGCTGCTTTCTTGGCAATAAAGAGTACTGGAGGGAAACTTTTGGTGTTTCAGTCAGTGTTGCCATCAACTGGAATTGGAGCGCTTTCAGCTAGAGAGGCTGAAGGAAGAGCTAATATATCTTCAGCTGAGAAGGAGCCCAATAAATTACTCCAGCCCGTGGACAAAACTTTAAAGACATTGGCAATTGAATTTGCTGAATATCAGGTTTGCGTTGATTTATTTATCACTACCCAGTCATACATAGATATTGCTTCTATCTCAGTCATCCCCAGAACAACCGGAGGGCAGGTTTACTATTATTATCCCTTCTCAGCTCTCTCTGATCCTGCAAAGCTATATAATGATCTTAGATGGAATGTCACAAGGCCGCAAGGTTTTGAGGCAGTGATGCGTGTAAGATGCAGCCAGGGTATTCAAGTTCAAGAGTACTTTGGAAACTTTTGCAAACGCATTCCAACAGATGTCGACCTACCTGGGATTGACTGTGACAAAACTATTATGGTAACGCTAAAGCATGATGACAAATTACAGGATGGCTCAGAATGTTCTTTCCAGTGTGCTGTTTTATACACGACTGTGTTTGGCCATCGGAGAATTCGGGTTACCACTTTGTCTCTGCCATGCACTAGTATGCTAAGTAATCTGTTTCGCGCTGCTGATTTGGACACTCAGTTTTCATGTTACATGAAGCAAGCGGCAAATGAAATCACGTCAAGTCCCCTCTTGCGTGCACGGGAACAAATGACAAATCTTTGCATCAATAGTCTGCTTTCATACCGCAAATTCTGTGCTACTGTATCATCTTCGGGACAGCTTATTCTTCCAGAGGCACTGAAGCTCCTGCCTCTATACACCCTTGCATTAATCAAAAGTACCGGACTACGAACTGATGGAAAAATTGATGAGCGGTCTTTCTGGATCAACCATGTTTCCTCCCTGTCTGTACCTTTGGCAGTTCCACTGGTGTATCCCAGGATGGTGGCTGTCCATGACCTTGATGCTCAAAAGGAGGGTGATGGATCTCTTATTCCTCCGGTGATTCCACTTTCTAGCGAACACGTTCGTGATGATGGAATATATCTTCTTGAGAATGGTGAGGACTGTTTAATATACGTTGGGAACTCGGTGGATTCTGGAATTTTACAACAGCTGTTTGGCGTCACCACTGCTGATGAACTTCCTACTCAGTTCGTGCTGCAGCAGTATGATAATTCATTATCAAAGAAGCTGAATGATGTGGTAAATGAAATACGCCGCCAGAGATGTTCCTACCTGCGATTGAAATTGTGCAAGAAAGGAGATCCTTCAGGAGCATTCTTCTTATCACATTTGGTTGAAGACCAGAGTCCCCATGGCCCCTCCTATGTTGAGTTTCTGGTACATGTCCATCGGCAAATACAGATAAAAATGACTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

1119

Amino Acids

120.0

Weight (kDa)

8.19

Isoelectric Point (pI)

55.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-Sec23_Sec24 PF04810 452 - 490 3.4e-16 Sec23/Sec24 zinc finger
Sec23_trunk PF04811 527 - 767 4e-80 Sec23/Sec24 trunk domain
Sec23_BS PF08033 772 - 856 9.2e-27 Sec23/Sec24 beta-sandwich domain
Sec23_helical PF04815 867 - 965 6.1e-25 Sec23/Sec24 helical domain
Gelsolin PF00626 991 - 1057 2.4e-08 Gelsolin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000554)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT3G44340 AT4G32640 AT4G32640
fragaria_vesca FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g05490 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000 FvH4_4g36000
malus_domestica MD02G1169200.v1.1 MD13G1230500.v1.1 MD15G1281700.v1.1 MD16G1009900.v1.1 MD16G1235300.v1.1
prunus_persica Prupe.1G056500_v2.0.a1 Prupe.1G056500_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1 Prupe.1G340700_v2.0.a1
pyrus_communis pycom02g13590 pycom13g20290 pycom15g24480 pycom16g00970 pycom16g19630
rosa_chinensis RchiOBHm_Chr4g0396591 RchiOBHm_Chr4g0445631
rosa_laevigata RLG00000005723 RLG00000009518
rosa_multiflora Rmu_co8031254.1_g000001 Rmu_co8351119.1_g000001 Rmu_sc0003637.1_g000024 Rmu_sc0010969.1_g000001 Rmu_sc0019383.1_g000002
rosa_roxburghii Rroxscaffold_5G00341440 Rroxscaffold_5G00386110
rosa_rugosa Rorug03G0348600 Rorug03G0348700 Rorug04G0363200 Rorug04G0363300 Rorug04G0363400 Rorug04G0363500
rosa_samantha Rh4AG070600 Rh4AG424700 Rh4AG425100 Rh4BG068500 Rh4BG436900 Rh4CG076300 Rh4CG451400 Rh4DG065600 Rh4DG433400
rosa_wichuraiana Rw4G005630 Rw4G036410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 310, 2218, 3222
AccB1I GGYRCC 4 cut(s) 28, 64, 250, 338
AccB7I CCANNNNNTGG 5 cut(s) 371, 674, 746, 2009, 2098
AccBSI CCGCTC 1 cut(s) 2848
AccI GTMKAC 1 cut(s) 2406
AccII CGCG 2 cut(s) 1464, 2592
AclWI GGATC 8 cut(s) 685, 769, 1064, 1571, 2258, 2867, 2968, 3236
AcoI YGGCCR 4 cut(s) 208, 373, 851, 2524
AcsI RAATTY 8 cut(s) 133, 655, 1080, 1544, 2129, 2535, 2723, 3078
AcuI CTGAAG 7 cut(s) 675, 1089, 1710, 2046, 2061, 2795, 3231
AcyI GRCGYC 1 cut(s) 3099
AdeI CACNNNGTG 1 cut(s) 257
AfaI GTAC 8 cut(s) 1110, 1595, 1797, 1966, 2369, 2815, 2886, 3321
AfeI AGCGCT 1 cut(s) 2022
AflIII ACRYGT 2 cut(s) 2998, 3322
AgeI ACCGGT 1 cut(s) 601
AhlI ACTAGT 1 cut(s) 2567
AjiI CACGTC 1 cut(s) 2652
AjuI GAANNNNNNNTTGG 4 cut(s) 706, 738, 1908, 1940
AleI CACNNNNGTG 2 cut(s) 2516, 3003
Alw21I GWGCWC 6 cut(s) 712, 732, 754, 1220, 1762, 2674
Alw26I GTCTC 6 cut(s) 162, 292, 1176, 1448, 1814, 2559
Alw44I GTGCAC 3 cut(s) 1216, 1758, 2670
AlwI GGATC 8 cut(s) 685, 769, 1064, 1571, 2258, 2867, 2968, 3236
Ama87I CYCGRG 1 cut(s) 244
Aor51HI AGCGCT 1 cut(s) 2022
ApaLI GTGCAC 3 cut(s) 1216, 1758, 2670
ApoI RAATTY 8 cut(s) 133, 655, 1080, 1544, 2129, 2535, 2723, 3078
ArsI GACNNNNNNTTYG 2 cut(s) 457, 489
AseI ATTAAT 1 cut(s) 2804
AsiGI ACCGGT 1 cut(s) 601
Asp700I GAANNNNTTC 2 cut(s) 1881, 3000
AspA2I CCTAGG 1 cut(s) 32
AspLEI GCGC 5 cut(s) 268, 575, 1661, 2023, 2594
AsuC2I CCSGG 3 cut(s) 245, 246, 293
AsuHPI GGTGA 8 cut(s) 225, 375, 675, 1355, 2966, 2989, 3047, 3094
AsuNHI GCTAGC 1 cut(s) 545
AvaI CYCGRG 1 cut(s) 244
AvaII GGWCC 9 cut(s) 485, 518, 530, 632, 737, 797, 1094, 1484, 1694
AvrII CCTAGG 1 cut(s) 32
BaeGI GKGCMC 7 cut(s) 31, 67, 253, 564, 1220, 1762, 2674
BaeI ACNNNNGTAYC 2 cut(s) 2891, 2924
BalI TGGCCA 4 cut(s) 210, 375, 853, 2526
BanI GGYRCC 4 cut(s) 28, 64, 250, 338
BanII GRGCYC 1 cut(s) 2079
BauI CACGAG 1 cut(s) 705
BbsI GAAGAC 2 cut(s) 372, 3285
Bbv12I GWGCWC 6 cut(s) 712, 732, 754, 1220, 1762, 2674
BceAI ACGGC 2 cut(s) 523, 1836
BcgI CGANNNNNNTGC 2 cut(s) 1106, 1140
BciVI GTATCC 2 cut(s) 1624, 2919
BcnI CCSGG 3 cut(s) 245, 246, 293
BcoDI GTCTC 6 cut(s) 162, 292, 1176, 1448, 1814, 2559
BcuI ACTAGT 1 cut(s) 2567
BfmI CTRYAG 4 cut(s) 303, 1647, 1763, 3137
BfoI RGCGCY 1 cut(s) 2024
BfuAI ACCTGC 3 cut(s) 310, 2218, 3222
BfuI GTATCC 2 cut(s) 1624, 2919
BlnI CCTAGG 1 cut(s) 32
BmcAI AGTACT 3 cut(s) 1110, 1966, 2369
Bme18I GGWCC 9 cut(s) 485, 518, 530, 632, 737, 797, 1094, 1484, 1694
BmeT110I CYCGRG 1 cut(s) 244
BmgBI CACGTC 1 cut(s) 2652
BmiI GGNNCC 7 cut(s) 30, 66, 252, 340, 1320, 2076, 3298
BmrI ACTGGG 2 cut(s) 1197, 2167
BmsI GCATC 7 cut(s) 1257, 1495, 1767, 2319, 2330, 2706, 2929
BmtI GCTAGC 1 cut(s) 549
BmuI ACTGGG 2 cut(s) 1197, 2167
BoxI GACNNNNGTC 1 cut(s) 3285
BpiI GAAGAC 2 cut(s) 372, 3285
BpmI CTGGAG 3 cut(s) 6, 1989, 2075
Bpu10I CCTNAGC 1 cut(s) 1521
BpuEI CTTGAG 2 cut(s) 786, 3047
BpuMI CCSGG 3 cut(s) 245, 246, 293
Bsa29I ATCGAT 1 cut(s) 1608
BsaBI GATNNNNATC 1 cut(s) 1074
BsaHI GRCGYC 1 cut(s) 3099
BsaI GGTCTC 1 cut(s) 292
BsaWI WCCGGW 5 cut(s) 119, 601, 2219, 2816, 2974
BsaXI ACNNNNNCTCC 6 cut(s) 1027, 1057, 2214, 2244, 2763, 2793
Bse118I RCCGGY 1 cut(s) 601
Bse8I GATNNNNATC 1 cut(s) 1074
BseCI ATCGAT 1 cut(s) 1608
BseGI GGATG 6 cut(s) 197, 1272, 1306, 2205, 2479, 2922
BseJI GATNNNNATC 1 cut(s) 1074
BseMII CTCAG 9 cut(s) 110, 1305, 1512, 2058, 2214, 2265, 2493, 2624, 3140
BseRI GAGGAG 7 cut(s) 9, 150, 690, 693, 807, 810, 1803
BseSI GKGCMC 7 cut(s) 31, 67, 253, 564, 1220, 1762, 2674
BseYI CCCAGC 2 cut(s) 445, 1052
BsgI GTGCAG 1 cut(s) 1950
Bsh1236I CGCG 2 cut(s) 1464, 2592
BshNI GGYRCC 4 cut(s) 28, 64, 250, 338
BshTI ACCGGT 1 cut(s) 601
BshVI ATCGAT 1 cut(s) 1608
BsiHKAI GWGCWC 6 cut(s) 712, 732, 754, 1220, 1762, 2674
BsiHKCI CYCGRG 1 cut(s) 244
BsiSI CCGG 7 cut(s) 120, 245, 293, 602, 2220, 2817, 2975
BslFI GGGAC 3 cut(s) 2643, 2763, 3273
BsmAI GTCTC 6 cut(s) 162, 292, 1176, 1448, 1814, 2559
BsmFI GGGAC 3 cut(s) 2643, 2763, 3273
BsmI GAATGC 5 cut(s) 721, 981, 1627, 2391, 3254
Bso31I GGTCTC 1 cut(s) 292
BsoBI CYCGRG 1 cut(s) 244
Bsp1407I TGTACA 1 cut(s) 1795
Bsp19I CCATGG 1 cut(s) 3292
BspCNI CTCAG 9 cut(s) 109, 1306, 1513, 2059, 2213, 2264, 2492, 2623, 3139
BspDI ATCGAT 1 cut(s) 1608
BspFNI CGCG 2 cut(s) 1464, 2592
BspHI TCATGA 1 cut(s) 1395
BspLI GGNNCC 7 cut(s) 30, 66, 252, 340, 1320, 2076, 3298
BspMAI CTGCAG 4 cut(s) 307, 1651, 1767, 3141
BspMI ACCTGC 3 cut(s) 310, 2218, 3222
BspOI GCTAGC 1 cut(s) 549
BspPI GGATC 8 cut(s) 685, 769, 1064, 1571, 2258, 2867, 2968, 3236
BspQI GCTCTTC 1 cut(s) 2041
BspT107I GGYRCC 4 cut(s) 28, 64, 250, 338
BspTNI GGTCTC 1 cut(s) 292
BsrBI CCGCTC 1 cut(s) 2848
BsrFI RCCGGY 1 cut(s) 601
BsrGI TGTACA 1 cut(s) 1795
BssAI RCCGGY 1 cut(s) 601
BssNI GRCGYC 1 cut(s) 3099
BssSI CACGAG 1 cut(s) 705
BssT1I CCWWGG 2 cut(s) 32, 3292
Bst2BI CACGAG 1 cut(s) 705
Bst4CI ACNGT 7 cut(s) 47, 846, 1540, 2426, 2518, 2737, 3044
Bst6I CTCTTC 1 cut(s) 2041
BstACI GRCGYC 1 cut(s) 3099
BstAPI GCANNNNNTGC 4 cut(s) 257, 727, 749, 1646
BstAUI TGTACA 1 cut(s) 1795
BstC8I GCNNGC 9 cut(s) 152, 547, 809, 1158, 1418, 1587, 1654, 2634, 2670
BstDSI CCRYGG 2 cut(s) 2097, 3292
BstEII GGTNACC 1 cut(s) 2542
BstENI CCTNNNNNAGG 2 cut(s) 21, 513
BstF5I GGATG 6 cut(s) 197, 1272, 1306, 2205, 2479, 2922
BstFNI CGCG 2 cut(s) 1464, 2592
BstH2I RGCGCY 1 cut(s) 2024
BstHHI GCGC 5 cut(s) 268, 575, 1661, 2023, 2594
BstMAI GTCTC 6 cut(s) 162, 292, 1176, 1448, 1814, 2559
BstNSI RCATGY 3 cut(s) 130, 811, 3326
BstPAI GACNNNNGTC 1 cut(s) 3285
BstPI GGTNACC 1 cut(s) 2542
BstSFI CTRYAG 4 cut(s) 303, 1647, 1763, 3137
BstSLI GKGCMC 7 cut(s) 31, 67, 253, 564, 1220, 1762, 2674
BstUI CGCG 2 cut(s) 1464, 2592
BstV2I GAAGAC 2 cut(s) 372, 3285
BstX2I RGATCY 4 cut(s) 677, 761, 2960, 3241
BstXI CCANNNNNNTGG 2 cut(s) 849, 2920
BstYI RGATCY 4 cut(s) 677, 761, 2960, 3241
Bsu15I ATCGAT 1 cut(s) 1608
BsuI GTATCC 2 cut(s) 1624, 2919
BsuTUI ATCGAT 1 cut(s) 1608
BtgI CCRYGG 2 cut(s) 2097, 3292
BtrI CACGTC 1 cut(s) 2652
BtsCI GGATG 6 cut(s) 197, 1272, 1306, 2205, 2479, 2922
BtsI GCAGTG 5 cut(s) 1239, 1471, 1760, 2331, 3105
BveI ACCTGC 3 cut(s) 310, 2218, 3222
Cac8I GCNNGC 9 cut(s) 152, 547, 809, 1158, 1418, 1587, 1654, 2634, 2670
CciI TCATGA 1 cut(s) 1395
CfoI GCGC 5 cut(s) 268, 575, 1661, 2023, 2594
Cfr10I RCCGGY 1 cut(s) 601
Cfr9I CCCGGG 1 cut(s) 244
ClaI ATCGAT 1 cut(s) 1608
CseI GACGC 1 cut(s) 3088
CsiI ACCWGGT 2 cut(s) 253, 577
Csp6I GTAC 8 cut(s) 1109, 1594, 1796, 1965, 2368, 2814, 2885, 3320
CspAI ACCGGT 1 cut(s) 601
CspCI CAANNNNNGTGG 2 cut(s) 1420, 1455
CviQI GTAC 8 cut(s) 1109, 1594, 1796, 1965, 2368, 2814, 2885, 3320
DraI TTTAAA 1 cut(s) 2112
DraIII CACNNNGTG 1 cut(s) 257
EaeI YGGCCR 4 cut(s) 208, 373, 851, 2524
Eam1104I CTCTTC 1 cut(s) 2041
EarI CTCTTC 1 cut(s) 2041
EciI GGCGGA 1 cut(s) 1143
Eco130I CCWWGG 2 cut(s) 32, 3292
Eco24I GRGCYC 1 cut(s) 2079
Eco31I GGTCTC 1 cut(s) 292
Eco47I GGWCC 9 cut(s) 485, 518, 530, 632, 737, 797, 1094, 1484, 1694
Eco47III AGCGCT 1 cut(s) 2022
Eco57I CTGAAG 7 cut(s) 675, 1089, 1710, 2046, 2061, 2795, 3231
Eco88I CYCGRG 1 cut(s) 244
Eco91I GGTNACC 1 cut(s) 2542
EcoNI CCTNNNNNAGG 2 cut(s) 21, 513
EcoO109I RGGNCCY 3 cut(s) 518, 797, 1694
EcoO65I GGTNACC 1 cut(s) 2542
EcoRI GAATTC 1 cut(s) 2535
EcoT14I CCWWGG 2 cut(s) 32, 3292
EcoT22I ATGCAT 1 cut(s) 723
EcoT38I GRGCYC 1 cut(s) 2079
ErhI CCWWGG 2 cut(s) 32, 3292
FaqI GGGAC 3 cut(s) 2643, 2763, 3273
FauI CCCGC 1 cut(s) 1469
FblI GTMKAC 1 cut(s) 2406
FokI GGATG 6 cut(s) 184, 1279, 1293, 2192, 2486, 2929
FriOI GRGCYC 1 cut(s) 2079
GlaI GCGC 5 cut(s) 267, 574, 1660, 2022, 2593
GsaI CCCAGC 2 cut(s) 449, 1056
GsuI CTGGAG 3 cut(s) 6, 1989, 2075
HaeII RGCGCY 1 cut(s) 2024
HapII CCGG 7 cut(s) 120, 245, 293, 602, 2220, 2817, 2975
HgaI GACGC 1 cut(s) 3088
HhaI GCGC 5 cut(s) 268, 575, 1661, 2023, 2594
Hin1I GRCGYC 1 cut(s) 3099
Hin6I GCGC 5 cut(s) 266, 573, 1659, 2021, 2592
HinP1I GCGC 5 cut(s) 266, 573, 1659, 2021, 2592
HincII GTYRAC 2 cut(s) 1856, 2407
HindII GTYRAC 2 cut(s) 1856, 2407
HinfI GANTC 8 cut(s) 110, 139, 1456, 1727, 1916, 2980, 3071, 3286
HpaII CCGG 7 cut(s) 120, 245, 293, 602, 2220, 2817, 2975
HphI GGTGA 8 cut(s) 225, 375, 675, 1355, 2966, 2989, 3047, 3094
HpyAV CCTTC 8 cut(s) 232, 519, 1310, 1685, 2036, 2065, 2257, 3255
HpyCH4III ACNGT 7 cut(s) 47, 846, 1540, 2426, 2518, 2737, 3044
HpyCH4IV ACGT 7 cut(s) 877, 1204, 1498, 1756, 2651, 3000, 3054
HpySE526I ACGT 7 cut(s) 877, 1204, 1498, 1756, 2651, 3000, 3054
Hsp92I GRCGYC 1 cut(s) 3099
HspAI GCGC 5 cut(s) 266, 573, 1659, 2021, 2592
LguI GCTCTTC 1 cut(s) 2041
LweI GCATC 7 cut(s) 1257, 1495, 1767, 2319, 2330, 2706, 2929
MabI ACCWGGT 2 cut(s) 253, 577
MaeII ACGT 7 cut(s) 877, 1204, 1498, 1756, 2651, 3000, 3054
MaeIII GTNAC 9 cut(s) 47, 122, 1205, 2299, 2426, 2443, 2542, 2621, 3100
MbiI CCGCTC 1 cut(s) 2848
MfeI CAATTG 2 cut(s) 1868, 2124
MflI RGATCY 4 cut(s) 677, 761, 2960, 3241
MlsI TGGCCA 4 cut(s) 210, 375, 853, 2526
MluNI TGGCCA 4 cut(s) 210, 375, 853, 2526
MlyI GAGTC 3 cut(s) 1450, 1721, 3295
MmeI TCCRAC 5 cut(s) 655, 671, 737, 1910, 2420
Mox20I TGGCCA 4 cut(s) 210, 375, 853, 2526
Mph1103I ATGCAT 1 cut(s) 723
MroXI GAANNNNTTC 2 cut(s) 1881, 3000
MscI TGGCCA 4 cut(s) 210, 375, 853, 2526
MseI TTAA 4 cut(s) 144, 2111, 2804, 3047
MslI CAYNNNNRTG 4 cut(s) 847, 2516, 2570, 3003
Msp20I TGGCCA 4 cut(s) 210, 375, 853, 2526
MspA1I CMGCKG 4 cut(s) 991, 1589, 2066, 3091
MspI CCGG 7 cut(s) 120, 245, 293, 602, 2220, 2817, 2975
MunI CAATTG 2 cut(s) 1868, 2124
Mva1269I GAATGC 5 cut(s) 721, 981, 1627, 2391, 3254
MvnI CGCG 2 cut(s) 1464, 2592
NciI CCSGG 3 cut(s) 245, 246, 293
NcoI CCATGG 1 cut(s) 3292
NheI GCTAGC 1 cut(s) 545
NlaIV GGNNCC 7 cut(s) 30, 66, 252, 340, 1320, 2076, 3298
NmeAIII GCCGAG 2 cut(s) 256, 1066
NmuCI GTSAC 3 cut(s) 2299, 2426, 3100
NsiI ATGCAT 1 cut(s) 723
NspI RCATGY 3 cut(s) 130, 811, 3326
OliI CACNNNNGTG 2 cut(s) 2516, 3003
PaeI GCATGC 1 cut(s) 811
PagI TCATGA 1 cut(s) 1395
PciI ACATGT 1 cut(s) 3322
PciSI GCTCTTC 1 cut(s) 2041
PcsI WCGNNNNNNNCGW 1 cut(s) 1366
PctI GAATGC 5 cut(s) 721, 981, 1627, 2391, 3254
PdmI GAANNNNTTC 2 cut(s) 1881, 3000
PfeI GAWTC 5 cut(s) 110, 139, 1916, 2980, 3071
PflMI CCANNNNNTGG 5 cut(s) 371, 674, 746, 2009, 2098
PinAI ACCGGT 1 cut(s) 601
PleI GAGTC 3 cut(s) 1450, 1721, 3294
PpsI GAGTC 3 cut(s) 1450, 1721, 3294
PpuMI RGGWCCY 3 cut(s) 518, 797, 1694
PscI ACATGT 1 cut(s) 3322
PshAI GACNNNNGTC 1 cut(s) 3285
PshBI ATTAAT 1 cut(s) 2804
Psp5II RGGWCCY 3 cut(s) 518, 797, 1694
PspEI GGTNACC 1 cut(s) 2542
PspFI CCCAGC 2 cut(s) 445, 1052
PspN4I GGNNCC 7 cut(s) 30, 66, 252, 340, 1320, 2076, 3298
PspPPI RGGWCCY 3 cut(s) 518, 797, 1694
PstI CTGCAG 4 cut(s) 307, 1651, 1767, 3141
PsuI RGATCY 4 cut(s) 677, 761, 2960, 3241
PvuII CAGCTG 3 cut(s) 1589, 2066, 3091
RsaI GTAC 8 cut(s) 1110, 1595, 1797, 1966, 2369, 2815, 2886, 3321
RsaNI GTAC 8 cut(s) 1109, 1594, 1796, 1965, 2368, 2814, 2885, 3320
RseI CAYNNNNRTG 4 cut(s) 847, 2516, 2570, 3003
SalI GTCGAC 1 cut(s) 2405
SapI GCTCTTC 1 cut(s) 2041
SaqAI TTAA 4 cut(s) 144, 2111, 2804, 3047
ScaI AGTACT 3 cut(s) 1110, 1966, 2369
SchI GAGTC 3 cut(s) 1450, 1721, 3295
SexAI ACCWGGT 2 cut(s) 253, 577
SfaNI GCATC 7 cut(s) 1257, 1495, 1767, 2319, 2330, 2706, 2929
SfcI CTRYAG 4 cut(s) 303, 1647, 1763, 3137
SinI GGWCC 9 cut(s) 485, 518, 530, 632, 737, 797, 1094, 1484, 1694
SmaI CCCGGG 1 cut(s) 246
SmiMI CAYNNNNRTG 4 cut(s) 847, 2516, 2570, 3003
SmlI CTYRAG 2 cut(s) 801, 3026
SmoI CTYRAG 2 cut(s) 801, 3026
SpeI ACTAGT 1 cut(s) 2567
SphI GCATGC 1 cut(s) 811
StyI CCWWGG 2 cut(s) 32, 3292
TaaI ACNGT 7 cut(s) 47, 846, 1540, 2426, 2518, 2737, 3044
TaiI ACGT 7 cut(s) 880, 1207, 1501, 1759, 2654, 3003, 3057
TaqI TCGA 4 cut(s) 1360, 1608, 1730, 2406
TatI WGTACW 5 cut(s) 1108, 1593, 1795, 1964, 2367
TauI GCSGC 6 cut(s) 220, 347, 814, 2311, 2639, 3198
TfiI GAWTC 5 cut(s) 110, 139, 1916, 2980, 3071
Tru1I TTAA 4 cut(s) 144, 2111, 2804, 3047
Tru9I TTAA 4 cut(s) 144, 2111, 2804, 3047
TseFI GTSAC 3 cut(s) 2299, 2426, 3100
Tsp45I GTSAC 3 cut(s) 2299, 2426, 3100
TspMI CCCGGG 1 cut(s) 244
Van91I CCANNNNNTGG 5 cut(s) 371, 674, 746, 2009, 2098
VneI GTGCAC 3 cut(s) 1216, 1758, 2670
VpaK11BI GGWCC 9 cut(s) 485, 518, 530, 632, 737, 797, 1094, 1484, 1694
VspI ATTAAT 1 cut(s) 2804
XagI CCTNNNNNAGG 2 cut(s) 21, 513
XapI RAATTY 8 cut(s) 133, 655, 1080, 1544, 2129, 2535, 2723, 3078
XbaI TCTAGA 2 cut(s) 395, 1816
XceI RCATGY 3 cut(s) 130, 811, 3326
XcmI CCANNNNNNNNNTGG 1 cut(s) 3290
XmaI CCCGGG 1 cut(s) 244
XmaJI CCTAGG 1 cut(s) 32
XmiI GTMKAC 1 cut(s) 2406
XmnI GAANNNNTTC 2 cut(s) 1881, 3000
ZrmI AGTACT 3 cut(s) 1110, 1966, 2369
Zsp2I ATGCAT 1 cut(s) 723
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.