Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001333

Physical Location & Seq

Genomic Coordinates Forward (+)

10780503 .. 10783996

Gene Structure 3494 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G28740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2754 bp

ATGGCGATTTCCAAAGATCTCTATCCTTCTCAAGAGGATCTACTCTATGAGGAAGAGCTTCTTCGAAACCAATTCAGCTTAAAGCTATGGTGGAGATACCTAATCGCAAAAGCTGAATCTCCTTTTAAGAAACGCTTCATCATCTACGAGAGAGCTTTAAAAGCACTTCCTGGAAGCTATAAACTGTGGTACGCTTATCTTAGAGAACGACTCGATATCGTTAGGAATTTGCCTGTTACTCATCCACAGTACGATTCTCTCAACAATACTTTTGAGAGAGGTCTTGTTACTATGCATAAGATGCCTAGGATTTGGGTTATGTATCTTCAGACTCTTACGGTTCAGCAATTGATTACTCGGACTCGGCGAACTTTCGACCGTGCGCTTTGTGCTTTACCTGTTACTCAACATGATAGGATTTGGGAACCGTATCTTGTGTTTGTGAGTCAAAATGGGATTCCTATTGAGACTTCACTTAGGGTTTATAGAAGGTATCTTATGTATGATCCTAGTCATATTGAGGAGTTTATTGAGTTTCTTGTCAAGTCTGAGCGTTGGCAAGAATCTGCAGAGAGATTAGCTTCTGTGTTGAATGATGATAAGTTTTATTCTATTAAAGGGAAGACTAAGCATAAACTGTGGTTGGAGTTGTGTGAGCTTCTTGTGCATCATGCTAATGTGATTTCGGGTCTTAATGTTGATGCTATTATAAGAGGAGGTATTAGGAAGTTTACGGATGAAGTTGGAATGCTGTGGACTTCTCTTGCGGATTATTACATTAGGAAGAATTTGTTGGAGAAAGCTAGGGATATTTATGAGGAGGGTATGATGAAGGTAGTAACTGTAAGGGATTTTAGTGTGATATTTGACGTTTATTCACGGTTCGAGGAGAGTACGGTCGCGAAGAAGATGGAGATGATGAGTTCAAGTGATGAAGAAGATGAGAATGAAGAGAATGGCGTAGAGGATGATGAAGAGGATGTTCGCCTTAATTTTAATCTGTCGGTGAAAGAGTTGCAGAGGAAGATACTGAATGGGTTTTGGTTGAATGATGATAATGATGTTGATCTGAGATTGGCTCGTTTGGAAGAACTGATGAACAGAAGACCTGCACTGGCAAACAGTGTGCTCCTTAGGCAGAATCCTCACAATGTTGAGCAATGGCATCGTAGAGTCAAAATATTTGAGGGAAACGCAGCAAAGCAGATTCTCACATACACAGAAGCAGTGAGGACTGTTGATCCTATGAAAGCAGTTGGGAAGCCTCACACCTTGTGGGTTGCTTTTGCCAAGTTGTATGAAAACCACAAAGACCTGGTCAATACTAGAGTGATTTTTGACAAAGCAGTCCAGGTAAACTACAAAACCGTAGATCATCTCGCCAGTGTGTGGTGTGAGTGGGCTGAGATGGAGCTGAGACACAAGAATTTCAAAGGAGCATTAGAGCTGATGAGGCGTGCTACAGCTGTACCGACAGTAGAAGTCAGACGGAGAGTTGCTGCTGATGGCAATGAACCAGTCCAGATGAAGCTGCATAGATCCTTGAGGCTTTGGTCCTTTTATGTTGATCTGGAAGAAAGTCTGGGGACGTTAGAATCGACAAGAGCTGTCTATGAGAAAATATTGGATTTGAGAATAGCTACACCTCAAATTATAATGAATTATGCTTTTCTTCTTGAGGAAAATAAGTACTTTGAAGATGCGTTCAAGGTGTATGAAAGAGGTGTCAAGATATTCAAGTATCCTCATGTGAAAGACATTTGGGTAACCTATCTTACAAAGTTTGTCAAGAGATACGGGAAGACAAAGCTGGAGCGGGCAAGAGAGTTGTTTGAGCATGCTGTTTCAATGGCCCCATCTGATGCTGTCAGGACGTTATACCTTCAGTATGCTAAGCTAGAAGAGGATTATGGTCTGGCTAAACGAGCCATGAAGGTTTATGAGGAAGCCACCAAAAAAGTTCCAGAAGGTCAGAAGCTTGAGATGTACGAGATATACATTTCCCGAGCAGCGGAGATATTTGGTGTTCCCAGAACAAGGGAAATATATGAACAAGCAATTGAATCTGGGCTTCCACATAAGGATGTGAAGATCATGTGCATAAAATTTGCTGAGCTGGAGAGAAGCTTGGGAGAGATTGATCGTGCTCGTGCACTCTATAAGTATTCCTCCCAGTTTGCAGATCCAAGGTCCGACCCTGAATTCTGGAACAAATGGCATGAGTTCGAGGTCCAGCACGGGAACGAAGATACCTACAGAGAAATGCTCCGTATCAAGCGAAGTGTTTCCGCAAGCTATAGTCAGACTCATTTCATTCTACCAGAGAACATGATGCAAAAGGACAAGCTGCTTGATGTGGAAGACGCAAAAGGCGAGCTGAAGAGAGCCGGTTTACCTGAAGACGAAATGGCGGCTCTGGAGAGGCAGCTTTTGTCTACAACTACCCCCACAGAGCCAGCAAAAGATGGCGGGAGAAGAGTTGGGTTTGTAAGCGCAGGAGTCATCTCACAGTCCGGTGAGAATGAGGGGAAACCAGTGACAGGGAATGGAGAAGACATCGAGCTTCCCGATGAAAGTGATGATGAGTCTGATGGAGATGACCATGTGGAGATCTCTCAGAAAGAAGTCCCTGCCGCTGTTTTTGGAGGACTTGCTAGAAAGAGAGACGAAGACGGCGAAGAAGCTGGAGAAGACGGTGCTGCCCAGAAATTGGGTGCACTTGAGAGGATCAAGAGACAGAAGCTTAATCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000349 GO:0000375 GO:0000377 GO:0000393 GO:0000398 GO:0000974 GO:0001701 GO:0001824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006259 GO:0006281 GO:0006283 GO:0006289 GO:0006351 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009790 GO:0009792 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0022607 GO:0022613 GO:0022618 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0033554 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043009 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048856 GO:0050896 GO:0051716 GO:0065003 GO:0071007 GO:0071010 GO:0071012 GO:0071013 GO:0071014 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

Suf

Protein Analysis

917

Amino Acids

107.05

Weight (kDa)

5.92

Isoelectric Point (pI)

47.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAT_Syf1_CNRKL1_N	PF23233	12 - 170	8.7e-60	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_N	PF23240	31 - 171	2.8e-06	PRP39 N-terminal HAT repeat
HAT_Syf1_M	PF23220	173 - 330	5.3e-57	Pre-mRNA-splicing factor SYF1 middle HAT repeat
HAT_Syf1_M	PF23220	350 - 413	5.8e-23	Pre-mRNA-splicing factor SYF1 middle HAT repeat
HAT_Syf1_CNRKL1_C	PF23231	415 - 809	6.2e-191	Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001333)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G28740
fragaria_vesca	FvH4_3g03910 FvH4_3g04150 FvH4_3g04150 FvH4_3g04150 FvH4_3g04150
malus_domestica	MD05G1324400.v1.1 MD10G1302200.v1.1
prunus_persica	Prupe.5G013200_v2.0.a1
pyrus_communis	pycom05g29860 pycom10g25470
rosa_chinensis	RchiOBHm_Chr5g0006181 RchiOBHm_Chr5g0006191 RchiOBHm_Chr5g0006201 RchiOBHm_Chr5g0006601 RchiOBHm_Chr7g0193971
rosa_laevigata	RLG00000004227 RLG00000031375 RLG00000031376 RLG00000031403
rosa_multiflora	Rmu_co7988368.1_g000001 Rmu_co8257165.1_g000001 Rmu_co8304153.1_g000001 Rmu_co8327759.1_g000001 Rmu_sc0001972.1_g000002 Rmu_sc0002389.1_g000006 Rmu_sc0004331.1_g000002 Rmu_sc0005583.1_g000001 Rmu_sc0009371.1_g000007 Rmu_sc0011154.1_g000005 Rmu_sc0024345.1_g000002 Rmu_sc0032392.1_g000001 Rmu_sc0032393.1_g000001
rosa_roxburghii	Rroxscaffold_1G00069420 Rroxscaffold_1G00069440 Rroxscaffold_1G00069800 Rroxscaffold_2G00122720 Rroxscaffold_3G00261670
rosa_rugosa	Rorug04G0422900
rosa_samantha	Rh5AG050200 Rh5BG046700 Rh5BG046800 Rh5BG049400 Rh5CG055400 Rh5CG055600 Rh5CG057800 Rh5DG046500 Rh5DG048800 Rh7AG139900 Rh7AG140000 Rh7DG141300
rosa_wichuraiana	Rw5G004790 Rw5G005020 Rw7G011940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	710, 1655
AasI	GACNNNNNNGTC	1 cut(s)	1346
Acc36I	ACCTGC	1 cut(s)	1117
AccB7I	CCANNNNNTGG	2 cut(s)	1389, 2710
AccBSI	CCGCTC	1 cut(s)	1816
AccI	GTMKAC	1 cut(s)	2435
AccII	CGCG	1 cut(s)	902
AciI	CCGC	7 cut(s)	767, 1816, 2012, 2289, 2411, 2469, 2634
AclWI	GGATC	6 cut(s)	45, 500, 1235, 1533, 2177, 2735
AcsI	RAATTY	5 cut(s)	226, 787, 1426, 2105, 2201
AcuI	CTGAAG	4 cut(s)	311, 1868, 2399, 2418
AdeI	CACNNNGTG	1 cut(s)	1275
AfaI	GTAC	6 cut(s)	191, 251, 895, 1470, 1691, 1988
AfiI	CCNNNNNNNGG	5 cut(s)	1389, 2011, 2037, 2540, 2710
AgsI	TTSAA	9 cut(s)	592, 927, 1048, 1432, 1697, 1708, 1738, 1848, 2063
AjnI	CCWGG	3 cut(s)	169, 1314, 1350
AjuI	GAANNNNNNNTTGG	2 cut(s)	776, 808
Alw21I	GWGCWC	4 cut(s)	1131, 2149, 2155, 2719
Alw26I	GTCTC	4 cut(s)	461, 1411, 2658, 2728
Alw44I	GTGCAC	2 cut(s)	2151, 2715
AlwI	GGATC	6 cut(s)	45, 500, 1235, 1533, 2177, 2735
Ama87I	CYCGRG	1 cut(s)	2004
AoxI	GGCC	1 cut(s)	1851
ApaLI	GTGCAC	2 cut(s)	2151, 2715
ApeKI	GCWGC	7 cut(s)	1196, 1499, 1531, 2009, 2347, 2425, 2699
ApoI	RAATTY	5 cut(s)	226, 787, 1426, 2105, 2201
ArsI	GACNNNNNNTTYG	2 cut(s)	1302, 1334
Asp700I	GAANNNNTTC	3 cut(s)	57, 134, 2284
AspA2I	CCTAGG	1 cut(s)	305
AspLEI	GCGC	2 cut(s)	385, 2495
AspS9I	GGNCC	4 cut(s)	1554, 1852, 2190, 2230
AsuHPI	GGTGA	2 cut(s)	1018, 2528
AsuII	TTCGAA	1 cut(s)	64
AvaI	CYCGRG	1 cut(s)	2004
AvaII	GGWCC	3 cut(s)	1554, 2190, 2230
AvrII	CCTAGG	1 cut(s)	305
AxyI	CCTNAGG	1 cut(s)	1133
BaeGI	GKGCMC	2 cut(s)	2155, 2719
BaeI	ACNNNNGTAYC	2 cut(s)	1452, 1485
BauI	CACGAG	1 cut(s)	2148
BbsI	GAAGAC	8 cut(s)	629, 1111, 1808, 2367, 2406, 2559, 2676, 2697
Bbv12I	GWGCWC	4 cut(s)	1131, 2149, 2155, 2719
BbvI	GCAGC	7 cut(s)	1208, 1486, 1518, 2021, 2334, 2437, 2686
BccI	CCATC	6 cut(s)	904, 1402, 1499, 1864, 2459, 2585
BceAI	ACGGC	1 cut(s)	2689
BcgI	CGANNNNNNTGC	2 cut(s)	1148, 1182
BciT130I	CCWGG	3 cut(s)	171, 1316, 1352
BciVI	GTATCC	1 cut(s)	1752
BcoDI	GTCTC	4 cut(s)	461, 1411, 2658, 2728
BfaI	CTAG	6 cut(s)	306, 510, 804, 1326, 1898, 2655
BfmI	CTRYAG	4 cut(s)	567, 1461, 2254, 2296
BfuAI	ACCTGC	1 cut(s)	1117
BfuI	GTATCC	1 cut(s)	1752
BglII	AGATCT	2 cut(s)	16, 2610
BisI	GCNGC	9 cut(s)	1197, 1500, 1532, 2010, 2348, 2412, 2426, 2634, 2700
BlnI	CCTAGG	1 cut(s)	305
BlpI	GCTNAGC	2 cut(s)	1893, 2112
BlsI	GCNGC	9 cut(s)	1198, 1501, 1533, 2011, 2349, 2413, 2427, 2635, 2701
BmcAI	AGTACT	1 cut(s)	1691
Bme1390I	CCNGG	3 cut(s)	171, 1316, 1352
Bme18I	GGWCC	3 cut(s)	1554, 2190, 2230
BmeT110I	CYCGRG	1 cut(s)	2004
BmgT120I	GGNCC	4 cut(s)	1554, 1852, 2190, 2230
BmiI	GGNNCC	2 cut(s)	426, 1854
BmrFI	CCNGG	3 cut(s)	171, 1316, 1352
BmrI	ACTGGG	1 cut(s)	2167
BmsI	GCATC	7 cut(s)	291, 676, 691, 1174, 1690, 1852, 2322
BmuI	ACTGGG	1 cut(s)	2167
BpiI	GAAGAC	8 cut(s)	629, 1111, 1808, 2367, 2406, 2559, 2676, 2697
BplI	GAGNNNNNCTC	6 cut(s)	195, 227, 1063, 1095, 2250, 2282
BpmI	CTGGAG	4 cut(s)	1832, 2138, 2438, 2706
Bpu1102I	GCTNAGC	2 cut(s)	1893, 2112
Bpu14I	TTCGAA	1 cut(s)	64
BpuEI	CTTGAG	5 cut(s)	15, 1564, 1697, 2000, 2741
BsaBI	GATNNNNATC	2 cut(s)	21, 1065
BsaJI	CCNNGG	2 cut(s)	305, 2186
BsaWI	WCCGGW	1 cut(s)	2513
Bsc4I	CCNNNNNNNGG	5 cut(s)	1389, 2011, 2037, 2540, 2710
Bse118I	RCCGGY	1 cut(s)	2387
Bse1I	ACTGG	5 cut(s)	1119, 1383, 1517, 2173, 2534
Bse21I	CCTNAGG	1 cut(s)	1133
Bse3DI	GCAATG	2 cut(s)	1166, 1516
Bse8I	GATNNNNATC	2 cut(s)	21, 1065
BseBI	CCWGG	3 cut(s)	171, 1316, 1352
BseDI	CCNNGG	2 cut(s)	305, 2186
BseGI	GGATG	5 cut(s)	241, 742, 973, 985, 2089
BseJI	GATNNNNATC	2 cut(s)	21, 1065
BseLI	CCNNNNNNNGG	5 cut(s)	1389, 2011, 2037, 2540, 2710
BseMI	GCAATG	2 cut(s)	1166, 1516
BseMII	CTCAG	6 cut(s)	540, 1061, 1395, 1406, 2103, 2630
BseNI	ACTGG	5 cut(s)	1119, 1383, 1517, 2173, 2534
BseRI	GAGGAG	4 cut(s)	536, 729, 833, 902
BseSI	GKGCMC	2 cut(s)	2155, 2719
BseXI	GCAGC	7 cut(s)	1208, 1486, 1518, 2021, 2334, 2437, 2686
BsgI	GTGCAG	1 cut(s)	1095
Bsh1236I	CGCG	1 cut(s)	902
Bsh1285I	CGRYCG	2 cut(s)	379, 900
BshFI	GGCC	1 cut(s)	1853
BsiEI	CGRYCG	2 cut(s)	379, 900
BsiHKAI	GWGCWC	4 cut(s)	1131, 2149, 2155, 2719
BsiHKCI	CYCGRG	1 cut(s)	2004
BsiSI	CCGG	2 cut(s)	2388, 2514
BslFI	GGGAC	2 cut(s)	1600, 2612
BslI	CCNNNNNNNGG	5 cut(s)	1389, 2011, 2037, 2540, 2710
BsmAI	GTCTC	4 cut(s)	461, 1411, 2658, 2728
BsmBI	CGTCTC	1 cut(s)	2658
BsmFI	GGGAC	2 cut(s)	1600, 2612
BsmI	GAATGC	1 cut(s)	753
BsnI	GGCC	1 cut(s)	1853
BsoBI	CYCGRG	1 cut(s)	2004
Bsp119I	TTCGAA	1 cut(s)	64
Bsp1286I	GDGCHC	4 cut(s)	1131, 2149, 2155, 2719
Bsp1720I	GCTNAGC	2 cut(s)	1893, 2112
Bsp68I	TCGCGA	1 cut(s)	902
BspACI	CCGC	7 cut(s)	767, 1816, 2012, 2289, 2411, 2469, 2634
BspANI	GGCC	1 cut(s)	1853
BspCNI	CTCAG	6 cut(s)	541, 1062, 1396, 1407, 2104, 2629
BspFNI	CGCG	1 cut(s)	902
BspLI	GGNNCC	2 cut(s)	426, 1854
BspMAI	CTGCAG	1 cut(s)	571
BspMI	ACCTGC	1 cut(s)	1117
BspPI	GGATC	6 cut(s)	45, 500, 1235, 1533, 2177, 2735
BspQI	GCTCTTC	1 cut(s)	48
BspT104I	TTCGAA	1 cut(s)	64
BsrBI	CCGCTC	1 cut(s)	1816
BsrDI	GCAATG	2 cut(s)	1166, 1516
BsrFI	RCCGGY	1 cut(s)	2387
BsrI	ACTGG	5 cut(s)	1119, 1383, 1517, 2173, 2534
BssAI	RCCGGY	1 cut(s)	2387
BssECI	CCNNGG	2 cut(s)	305, 2186
BssSI	CACGAG	1 cut(s)	2148
BssT1I	CCWWGG	2 cut(s)	305, 2186
Bst2BI	CACGAG	1 cut(s)	2148
Bst2UI	CCWGG	3 cut(s)	171, 1316, 1352
Bst6I	CTCTTC	6 cut(s)	48, 945, 969, 1896, 2375, 2470
BstAPI	GCANNNNNTGC	1 cut(s)	301
BstBI	TTCGAA	1 cut(s)	64
BstC8I	GCNNGC	6 cut(s)	1458, 1818, 1839, 2293, 2375, 2457
BstEII	GGTNACC	1 cut(s)	1765
BstF5I	GGATG	5 cut(s)	241, 742, 973, 985, 2089
BstFNI	CGCG	1 cut(s)	902
BstHHI	GCGC	2 cut(s)	385, 2495
BstMAI	GTCTC	4 cut(s)	461, 1411, 2658, 2728
BstMCI	CGRYCG	2 cut(s)	379, 900
BstMWI	GCNNNNNNNGC	7 cut(s)	161, 301, 389, 664, 1135, 1453, 1925
BstNI	CCWGG	3 cut(s)	171, 1316, 1352
BstNSI	RCATGY	1 cut(s)	1841
BstPI	GGTNACC	1 cut(s)	1765
BstSCI	CCNGG	3 cut(s)	169, 1314, 1350
BstSFI	CTRYAG	4 cut(s)	567, 1461, 2254, 2296
BstSLI	GKGCMC	2 cut(s)	2155, 2719
BstUI	CGCG	1 cut(s)	902
BstV1I	GCAGC	7 cut(s)	1208, 1486, 1518, 2021, 2334, 2437, 2686
BstV2I	GAAGAC	8 cut(s)	629, 1111, 1808, 2367, 2406, 2559, 2676, 2697
BstX2I	RGATCY	5 cut(s)	16, 37, 1538, 2182, 2610
BstYI	RGATCY	5 cut(s)	16, 37, 1538, 2182, 2610
Bsu36I	CCTNAGG	1 cut(s)	1133
BsuI	GTATCC	1 cut(s)	1752
BsuRI	GGCC	1 cut(s)	1853
BtsCI	GGATG	5 cut(s)	241, 742, 973, 985, 2089
BtsI	GCAGTG	1 cut(s)	1233
BtsIMutI	CAGTG	5 cut(s)	1112, 1129, 1233, 1390, 2541
BtuMI	TCGCGA	1 cut(s)	902
BveI	ACCTGC	1 cut(s)	1117
Cac8I	GCNNGC	6 cut(s)	1458, 1818, 1839, 2293, 2375, 2457
CfoI	GCGC	2 cut(s)	385, 2495
Cfr10I	RCCGGY	1 cut(s)	2387
Cfr13I	GGNCC	4 cut(s)	1554, 1852, 2190, 2230
CseI	GACGC	1 cut(s)	2372
CsiI	ACCWGGT	1 cut(s)	1314
Csp6I	GTAC	6 cut(s)	190, 250, 894, 1469, 1690, 1987
CviAII	CATG	9 cut(s)	410, 671, 1748, 1838, 1930, 2095, 2219, 2329, 2603
CviQI	GTAC	6 cut(s)	190, 250, 894, 1469, 1690, 1987
DraI	TTTAAA	1 cut(s)	159
DraIII	CACNNNGTG	1 cut(s)	1275
DrdI	GACNNNNNNGTC	1 cut(s)	1346
DseDI	GACNNNNNNGTC	1 cut(s)	1346
Eam1104I	CTCTTC	6 cut(s)	48, 945, 969, 1896, 2375, 2470
EarI	CTCTTC	6 cut(s)	48, 945, 969, 1896, 2375, 2470
Eco130I	CCWWGG	2 cut(s)	305, 2186
Eco32I	GATATC	1 cut(s)	217
Eco47I	GGWCC	3 cut(s)	1554, 2190, 2230
Eco57I	CTGAAG	4 cut(s)	311, 1868, 2399, 2418
Eco81I	CCTNAGG	1 cut(s)	1133
Eco88I	CYCGRG	1 cut(s)	2004
Eco91I	GGTNACC	1 cut(s)	1765
EcoO65I	GGTNACC	1 cut(s)	1765
EcoRI	GAATTC	1 cut(s)	2201
EcoRII	CCWGG	3 cut(s)	169, 1314, 1350
EcoRV	GATATC	1 cut(s)	217
EcoT14I	CCWWGG	2 cut(s)	305, 2186
EcoT22I	ATGCAT	1 cut(s)	297
ErhI	CCWWGG	2 cut(s)	305, 2186
Esp3I	CGTCTC	1 cut(s)	2658
FaeI	CATG	9 cut(s)	413, 674, 1751, 1841, 1933, 2098, 2222, 2332, 2606
FalI	AAGNNNNNCTT	4 cut(s)	45, 77, 119, 151
FaqI	GGGAC	2 cut(s)	1600, 2612
FatI	CATG	9 cut(s)	409, 670, 1747, 1837, 1929, 2094, 2218, 2328, 2602
FauI	CCCGC	2 cut(s)	1809, 2462
FblI	GTMKAC	1 cut(s)	2435
Fnu4HI	GCNGC	9 cut(s)	1197, 1500, 1532, 2010, 2348, 2412, 2426, 2634, 2700
FokI	GGATG	5 cut(s)	228, 749, 980, 992, 2096
Fsp4HI	GCNGC	9 cut(s)	1197, 1500, 1532, 2010, 2348, 2412, 2426, 2634, 2700
FspBI	CTAG	6 cut(s)	306, 510, 804, 1326, 1898, 2655
GlaI	GCGC	2 cut(s)	384, 2494
GluI	GCNGC	9 cut(s)	1197, 1500, 1532, 2010, 2348, 2412, 2426, 2634, 2700
GsuI	CTGGAG	4 cut(s)	1832, 2138, 2438, 2706
HaeIII	GGCC	1 cut(s)	1853
HapII	CCGG	2 cut(s)	2388, 2514
HgaI	GACGC	1 cut(s)	2372
HhaI	GCGC	2 cut(s)	385, 2495
Hin1II	CATG	9 cut(s)	413, 674, 1751, 1841, 1933, 2098, 2222, 2332, 2606
Hin6I	GCGC	2 cut(s)	383, 2493
HinP1I	GCGC	2 cut(s)	383, 2493
HindIII	AAGCTT	3 cut(s)	1976, 2125, 2741
HpaII	CCGG	2 cut(s)	2388, 2514
HphI	GGTGA	2 cut(s)	1018, 2528
Hpy166II	GTNNAC	7 cut(s)	732, 756, 1357, 2153, 2393, 2436, 2717
Hpy8I	GTNNAC	7 cut(s)	732, 756, 1357, 2153, 2393, 2436, 2717
HpyAV	CCTTC	6 cut(s)	36, 483, 826, 1892, 1927, 1961
HpyCH4IV	ACGT	3 cut(s)	870, 1589, 1874
HpyF10VI	GCNNNNNNNGC	7 cut(s)	161, 301, 389, 664, 1135, 1453, 1925
HpySE526I	ACGT	3 cut(s)	870, 1589, 1874
Hsp92II	CATG	9 cut(s)	413, 674, 1751, 1841, 1933, 2098, 2222, 2332, 2606
HspAI	GCGC	2 cut(s)	383, 2493
LguI	GCTCTTC	1 cut(s)	48
LmnI	GCTCC	5 cut(s)	1134, 1411, 1436, 1813, 2271
Lsp1109I	GCAGC	7 cut(s)	1208, 1486, 1518, 2021, 2334, 2437, 2686
LweI	GCATC	7 cut(s)	291, 676, 691, 1174, 1690, 1852, 2322
MabI	ACCWGGT	1 cut(s)	1314
MaeI	CTAG	6 cut(s)	306, 510, 804, 1326, 1898, 2655
MaeII	ACGT	3 cut(s)	870, 1589, 1874
MaeIII	GTNAC	6 cut(s)	235, 286, 400, 838, 1765, 2536
MbiI	CCGCTC	1 cut(s)	1816
MfeI	CAATTG	2 cut(s)	347, 2058
MflI	RGATCY	5 cut(s)	16, 37, 1538, 2182, 2610
MhlI	GDGCHC	4 cut(s)	1131, 2149, 2155, 2719
MlyI	GAGTC	8 cut(s)	204, 325, 355, 454, 1182, 2299, 2508, 2594
MmeI	TCCRAC	4 cut(s)	624, 724, 774, 2217
Mph1103I	ATGCAT	1 cut(s)	297
MroXI	GAANNNNTTC	3 cut(s)	57, 134, 2284
MseI	TTAA	8 cut(s)	80, 126, 158, 615, 693, 990, 996, 2745
MslI	CAYNNNNRTG	2 cut(s)	675, 2082
MspA1I	CMGCKG	3 cut(s)	1466, 2012, 2636
MspI	CCGG	2 cut(s)	2388, 2514
MspR9I	CCNGG	3 cut(s)	171, 1316, 1352
MunI	CAATTG	2 cut(s)	347, 2058
Mva1269I	GAATGC	1 cut(s)	753
MvaI	CCWGG	3 cut(s)	171, 1316, 1352
MvnI	CGCG	1 cut(s)	902
MwoI	GCNNNNNNNGC	7 cut(s)	161, 301, 389, 664, 1135, 1453, 1925
NlaIII	CATG	9 cut(s)	413, 674, 1751, 1841, 1933, 2098, 2222, 2332, 2606
NlaIV	GGNNCC	2 cut(s)	426, 1854
NmeAIII	GCCGAG	1 cut(s)	343
NmuCI	GTSAC	1 cut(s)	2536
NruI	TCGCGA	1 cut(s)	902
NsiI	ATGCAT	1 cut(s)	297
NspI	RCATGY	1 cut(s)	1841
NspV	TTCGAA	1 cut(s)	64
PaeI	GCATGC	1 cut(s)	1841
PciSI	GCTCTTC	1 cut(s)	48
PcsI	WCGNNNNNNNCGW	5 cut(s)	364, 1595, 2370, 2565, 2673
PctI	GAATGC	1 cut(s)	753
PdmI	GAANNNNTTC	3 cut(s)	57, 134, 2284
PfeI	GAWTC	8 cut(s)	116, 254, 457, 563, 1141, 1207, 1595, 2063
PflFI	GACNNNGTC	1 cut(s)	1316
PflMI	CCANNNNNTGG	2 cut(s)	1389, 2710
PfoI	TCCNGGA	1 cut(s)	169
PkrI	GCNGC	9 cut(s)	1198, 1501, 1533, 2011, 2349, 2413, 2427, 2635, 2701
PleI	GAGTC	8 cut(s)	204, 325, 355, 453, 1181, 2299, 2507, 2593
PpsI	GAGTC	8 cut(s)	204, 325, 355, 453, 1181, 2299, 2507, 2593
PsiI	TTATAA	2 cut(s)	710, 1655
Psp6I	CCWGG	3 cut(s)	169, 1314, 1350
PspEI	GGTNACC	1 cut(s)	1765
PspGI	CCWGG	3 cut(s)	169, 1314, 1350
PspN4I	GGNNCC	2 cut(s)	426, 1854
PspPI	GGNCC	4 cut(s)	1554, 1852, 2190, 2230
PstI	CTGCAG	1 cut(s)	571
PsuI	RGATCY	5 cut(s)	16, 37, 1538, 2182, 2610
PsyI	GACNNNGTC	1 cut(s)	1316
PvuII	CAGCTG	1 cut(s)	1466
RruI	TCGCGA	1 cut(s)	902
RsaI	GTAC	6 cut(s)	191, 251, 895, 1470, 1691, 1988
RsaNI	GTAC	6 cut(s)	190, 250, 894, 1469, 1690, 1987
RseI	CAYNNNNRTG	2 cut(s)	675, 2082
SapI	GCTCTTC	1 cut(s)	48
SaqAI	TTAA	8 cut(s)	80, 126, 158, 615, 693, 990, 996, 2745
SatI	GCNGC	9 cut(s)	1197, 1500, 1532, 2010, 2348, 2412, 2426, 2634, 2700
Sau96I	GGNCC	4 cut(s)	1554, 1852, 2190, 2230
ScaI	AGTACT	1 cut(s)	1691
SchI	GAGTC	8 cut(s)	204, 325, 355, 454, 1182, 2299, 2508, 2594
ScrFI	CCNGG	3 cut(s)	171, 1316, 1352
SduI	GDGCHC	4 cut(s)	1131, 2149, 2155, 2719
SexAI	ACCWGGT	1 cut(s)	1314
SfaNI	GCATC	7 cut(s)	291, 676, 691, 1174, 1690, 1852, 2322
SfcI	CTRYAG	4 cut(s)	567, 1461, 2254, 2296
SfuI	TTCGAA	1 cut(s)	64
SinI	GGWCC	3 cut(s)	1554, 2190, 2230
SmiMI	CAYNNNNRTG	2 cut(s)	675, 2082
SmlI	CTYRAG	5 cut(s)	30, 1543, 1676, 1979, 2720
SmoI	CTYRAG	5 cut(s)	30, 1543, 1676, 1979, 2720
SphI	GCATGC	1 cut(s)	1841
SsiI	CCGC	7 cut(s)	767, 1816, 2012, 2289, 2411, 2469, 2634
SspI	AATATT	2 cut(s)	1182, 1623
SspMI	CTAG	6 cut(s)	306, 510, 804, 1326, 1898, 2655
StyD4I	CCNGG	3 cut(s)	169, 1314, 1350
StyI	CCWWGG	2 cut(s)	305, 2186
TaiI	ACGT	3 cut(s)	873, 1592, 1877
TaqI	TCGA	7 cut(s)	64, 213, 375, 885, 1598, 2226, 2559
TatI	WGTACW	1 cut(s)	1689
TauI	GCSGC	2 cut(s)	2414, 2636
TfiI	GAWTC	8 cut(s)	116, 254, 457, 563, 1141, 1207, 1595, 2063
Tru1I	TTAA	8 cut(s)	80, 126, 158, 615, 693, 990, 996, 2745
Tru9I	TTAA	8 cut(s)	80, 126, 158, 615, 693, 990, 996, 2745
TscAI	CASTG	5 cut(s)	1119, 1129, 1233, 1390, 2541
TseFI	GTSAC	1 cut(s)	2536
TseI	GCWGC	7 cut(s)	1196, 1499, 1531, 2009, 2347, 2425, 2699
Tsp45I	GTSAC	1 cut(s)	2536
TspGWI	ACGGA	3 cut(s)	749, 1504, 2258
TspRI	CASTG	5 cut(s)	1119, 1129, 1233, 1390, 2541
Tth111I	GACNNNGTC	1 cut(s)	1316
Van91I	CCANNNNNTGG	2 cut(s)	1389, 2710
VneI	GTGCAC	2 cut(s)	2151, 2715
VpaK11BI	GGWCC	3 cut(s)	1554, 2190, 2230
XapI	RAATTY	5 cut(s)	226, 787, 1426, 2105, 2201
XceI	RCATGY	1 cut(s)	1841
XmaJI	CCTAGG	1 cut(s)	305
XmiI	GTMKAC	1 cut(s)	2435
XmnI	GAANNNNTTC	3 cut(s)	57, 134, 2284
XspI	CTAG	6 cut(s)	306, 510, 804, 1326, 1898, 2655
ZrmI	AGTACT	1 cut(s)	1691
Zsp2I	ATGCAT	1 cut(s)	297

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.