Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0001333

Physical Location & Seq

Genomic Coordinates Reverse (-)

1411848 .. 1415095

Gene Structure 3248 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G013200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2766 bp

ATGTCGATCTCTCAAGAGCTTTACCCATCCCAAGACGACCTTCTTTACGAAGAAGAGCTTCTCCGAAACCCCTTTAGCCTGAAGGTATGGTGGCGTTACCTAATCGCTCGATCCGAATCTCCATTCAAGAAGCGTTTTATAATCTACGAGCGAGCACTCAAGGCCCTTCCTGGGAGCTACAAGCTTTGGTCCGCTTACCTTCACGAACGCCTCGAGCTCGTTCGCAATTTACCCATCACTCACTTCCAGTATGAAACCCTCAACAACACTTTTGAAAGAGCCCTGGTTACTATGCACAAAATGCCCAAAATTTGGATTCGGTACTTGCAAACTTTGACGGAGCAGAAGTTGTTCACTCGGACTCGCCGGACCTTCGACAGAGCGCTGTGTGCTCTTCCAGTGACGCAGCACGACGGCATTTGGGACCCGTACCTGGAGTTCGTGAGCCGAAAGGGTATTCCAATTGAGACCTCGCTTCGGCTTTATCGCAGGTATTTGAAATATGACCCTACCCATATTGAAAAATTCATTGAGTTCTTGATAAATTCTAGTCTTTGGCAAGAGGCTGCCGAGAGGCTGGCTTCAGTGTTGAATGATGACCAGTTCTATTCGATAAAGGGGAAAACGAAACATAGGCTGTGGTTGGAATTGTGTGATTTGCTTGCTAAGCACGCTAAGGAGGTGTCAGGCCTCAATGTAGATGCTATTATTAGAGGTGGGATTAGGAAATTTACAGACGAGGTGGGACGGTTGTGGACCTCACTTGCTGACTATTACATTAGGAGGAATTTGCACGAGAAAGCTAGGGATATATTTGAGGAGGGTATGACTACTGTGGTAACGGTAAGAGATTTTAGTGTAATTTTCGATTCGTATGTTGGGTTTGAAGATAGCATGCTTATCCATAAGATGGAGACTGCGGATTTGAGTGATGAAGAGGAGGAAGAAGAAAATGGGGTAGAAGAGGATGGAAATGAGGAGGAAGTTGATCTTCGATTGGATGTTAACTTGTCTGTGGCTGAGCTTGAGAAGGAAATGCTTAATGGGTTTTGGTTACATGATGATAAGGACGTAGATTTGAGGTTGGCTCGATTGGAGCATCTTATGGATAGAAGTCCTATACTGGCTAATAGTGTTCTTTTACGACAAAATCCCCATAATGTAGAGCAGTGGCACCAAAGAGTGAAGCTCTTTGAGGGTAATCCCACAAAGCAGATACTTACTTACACAGAGGCTGTGAGGACGGTTGATCCAATGAAAGCAGTGGGAAAGCCTCATACGTTGTGGGTTGCGTTTGCTAAGTTGTACGAGAATCACAAAGATATTGCAAATGCAAGAGTGATTTTTGATAAAGCAGTTCAGGTGAACTACAAGACAGTGGATTATTTGGCTAGTCTTTGGTGTGAGTGGGCAGAAATGGAATTGAGGCATAAGAATTTCAAAGGAGCACTGGAACTAATGAGGCTGGCCACCGCAGAGCCATCCGTTGAGGTGAAACGCAGAGTGGCGGCTGATGGTAACCAACCGGTTCAGATGAAGCTGCAAAAGTCCTTGAGAATGTGGACTTTTTACGTGGATTTAGAGGAGAGCCTTGGTAAATTGGAGTCCACCCGGGCTGTTTATGAGAGGATAATGGATTTGAAGATAGCCACACCACAAATCATAATCAATTATGCATTGCTTCTGGAGAAGCATAAATACTTTGAAGATGCGTTCAAGGTGTATGAAAAAGGTACCAAAATATTTAAGTACCCACATGTCAAAGACATATGGGTTACATATCTCTCTAAATTTGTAAAGAGATATGGGAAGAAAGAACTGGAACGTGCAAGACAGCTATTTGAGGATGCTGTTCAAGCAGCGCCTGCTGATGCAAAGAAACCTTTGTATCTTCAATTTGCAAATCTGGAGGAGGATTATGGTCTAGCAAAGCGCGCTATGAAGATCTATGATGAAGCAACTAAGGCTGTTCCAAACCATGATAAATTGAGCATGTATGAAATGTACATTGCCCGTGCTGCAGAAATATTTGGCATCCCCAAAACAAGGGAAATATATGAGCAAGCAATAAAATCCGGTCTTCCAGACAAAGATGTGAAGACAATGTGTTTGAAGTATACTGAGCTTGAGAAGAGCTTGGGAGAAATTGATCGTGCTCGGGGAGTATATATATTTGCATCACAGTTTTCGGATCCACGATCTGATGTAGATTTCTGGAACAAATGGCATGAGTTTGAGGTGCAACATGGAAATGAAGATACCTTCCGAGAGATGCTTCAAATTAAGCGAAGTGTTTCTGCAAGCTATAGCCAGACACACTTTATTCTACCCGAGTATATGATGCAAAAGGATCAGAGGTTGAACATTGATGAGGCAAAACACAAGTTGAAACAGGCTGGAGTCCCTGAAGATGAAATGGCTGCTTTAGAGAGGCAGTTGGCACCTGTGGCTAAAGACACTACCACCAAAGATAGTAACAGAAAAGTGGGCTTTGTGAGTGCTGGAGTAGAATCACAGATGGACAAAGAGATCAAAGTTACTGCAATTCATGAAGAAATTAAGCTACTGGAAGAAAGTGATTCAGAAGATGATGAAATGGTTGAAATTGCACTAAAGGAGGTCCCATCTGCTGTTTTTGGAGAGTTGGCTAACAAGAGAAAGGAGGCTGAAAAAGATGAGGGTGGAGATGTTGCTGCTGCGACCAAGGATGGTGACACCCACCTTGGCGCCCTTGAGAGAATAAAGAGGCTAAAACGAGGCGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000349 GO:0000375 GO:0000377 GO:0000393 GO:0000398 GO:0000974 GO:0001701 GO:0001824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006259 GO:0006281 GO:0006283 GO:0006289 GO:0006351 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009790 GO:0009792 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0022607 GO:0022613 GO:0022618 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0033554 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043009 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048856 GO:0050896 GO:0051716 GO:0065003 GO:0071007 GO:0071010 GO:0071012 GO:0071013 GO:0071014 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

Suf

Protein Analysis

922

Amino Acids

107.47

Weight (kDa)

5.93

Isoelectric Point (pI)

42.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001333)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G28740
fragaria_vesca	FvH4_3g03910 FvH4_3g04150 FvH4_3g04150 FvH4_3g04150 FvH4_3g04150
malus_domestica	MD05G1324400.v1.1 MD10G1302200.v1.1
prunus_persica	Prupe.5G013200_v2.0.a1
pyrus_communis	pycom05g29860 pycom10g25470
rosa_chinensis	RchiOBHm_Chr5g0006181 RchiOBHm_Chr5g0006191 RchiOBHm_Chr5g0006201 RchiOBHm_Chr5g0006601 RchiOBHm_Chr7g0193971
rosa_laevigata	RLG00000004227 RLG00000031375 RLG00000031376 RLG00000031403
rosa_multiflora	Rmu_co7988368.1_g000001 Rmu_co8257165.1_g000001 Rmu_co8304153.1_g000001 Rmu_co8327759.1_g000001 Rmu_sc0001972.1_g000002 Rmu_sc0002389.1_g000006 Rmu_sc0004331.1_g000002 Rmu_sc0005583.1_g000001 Rmu_sc0009371.1_g000007 Rmu_sc0011154.1_g000005 Rmu_sc0024345.1_g000002 Rmu_sc0032392.1_g000001 Rmu_sc0032393.1_g000001
rosa_roxburghii	Rroxscaffold_1G00069420 Rroxscaffold_1G00069440 Rroxscaffold_1G00069800 Rroxscaffold_2G00122720 Rroxscaffold_3G00261670
rosa_rugosa	Rorug04G0422900
rosa_samantha	Rh5AG050200 Rh5BG046700 Rh5BG046800 Rh5BG049400 Rh5CG055400 Rh5CG055600 Rh5CG057800 Rh5DG046500 Rh5DG048800 Rh7AG139900 Rh7AG140000 Rh7DG141300
rosa_wichuraiana	Rw5G004790 Rw5G005020 Rw7G011940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	140
Acc36I	ACCTGC	1 cut(s)	480
Acc65I	GGTACC	1 cut(s)	1733
AccB1I	GGYRCC	4 cut(s)	1173, 1733, 2440, 2726
AccB7I	CCANNNNNTGG	2 cut(s)	312, 910
AccI	GTMKAC	1 cut(s)	2117
AccII	CGCG	1 cut(s)	1935
AciI	CCGC	5 cut(s)	192, 920, 1473, 1508, 2760
AclWI	GGATC	5 cut(s)	105, 1244, 2186, 2199, 2358
AcoI	YGGCCR	1 cut(s)	1467
AcsI	RAATTY	7 cut(s)	309, 524, 544, 728, 787, 1435, 1790
AcuI	CTGAAG	3 cut(s)	101, 567, 2427
AcyI	GRCGYC	1 cut(s)	2727
AfaI	GTAC	6 cut(s)	323, 431, 1307, 1735, 1751, 2006
AfeI	AGCGCT	1 cut(s)	384
AfiI	CCNNNNNNNGG	6 cut(s)	171, 312, 433, 477, 910, 2046
AflIII	ACRYGT	1 cut(s)	1756
AgeI	ACCGGT	1 cut(s)	1525
AjnI	CCWGG	3 cut(s)	169, 282, 432
AjuI	GAANNNNNNNTTGG	2 cut(s)	24, 56
Alw21I	GWGCWC	5 cut(s)	157, 219, 394, 1450, 2158
Alw26I	GTCTC	2 cut(s)	461, 908
AlwI	GGATC	5 cut(s)	105, 1244, 2186, 2199, 2358
AlwNI	CAGNNNCTG	2 cut(s)	1235, 1865
Ama87I	CYCGRG	4 cut(s)	212, 1611, 2157, 2330
Aor51HI	AGCGCT	1 cut(s)	384
AoxI	GGCC	3 cut(s)	162, 688, 1467
ApeKI	GCWGC	8 cut(s)	406, 566, 1540, 1859, 2018, 2420, 2693, 2696
ApoI	RAATTY	7 cut(s)	309, 524, 544, 728, 787, 1435, 1790
ArsI	GACNNNNNNTTYG	4 cut(s)	907, 939, 2092, 2124
AsiGI	ACCGGT	1 cut(s)	1525
Asp700I	GAANNNNTTC	3 cut(s)	57, 350, 2293
Asp718I	GGTACC	1 cut(s)	1733
AspLEI	GCGC	5 cut(s)	385, 1864, 1935, 1937, 2729
AspS9I	GGNCC	6 cut(s)	163, 189, 369, 424, 756, 2620
AsuC2I	CCSGG	2 cut(s)	1612, 1613
AsuHPI	GGTGA	3 cut(s)	1375, 1504, 2723
AvaI	CYCGRG	4 cut(s)	212, 1611, 2157, 2330
AvaII	GGWCC	5 cut(s)	189, 369, 424, 756, 2620
BaeI	ACNNNNGTAYC	2 cut(s)	1871, 1904
BalI	TGGCCA	1 cut(s)	1469
BamHI	GGATCC	1 cut(s)	2191
BanI	GGYRCC	4 cut(s)	1173, 1733, 2440, 2726
BanII	GRGCYC	2 cut(s)	219, 283
BarI	GAAGNNNNNNTAC	2 cut(s)	1682, 1714
BauI	CACGAG	1 cut(s)	794
BbsI	GAAGAC	2 cut(s)	2072, 2105
Bbv12I	GWGCWC	5 cut(s)	157, 219, 394, 1450, 2158
BbvI	GCAGC	8 cut(s)	418, 553, 1527, 1871, 2005, 2407, 2680, 2683
BccI	CCATC	9 cut(s)	34, 242, 904, 962, 1489, 1508, 2512, 2632, 2702
BceAI	ACGGC	1 cut(s)	430
BciT130I	CCWGG	3 cut(s)	171, 284, 434
BcnI	CCSGG	2 cut(s)	1612, 1613
BcoDI	GTCTC	2 cut(s)	461, 908
BfaI	CTAG	4 cut(s)	549, 804, 1392, 1925
BfmI	CTRYAG	2 cut(s)	2019, 2305
BfoI	RGCGCY	3 cut(s)	386, 1865, 2730
BfuAI	ACCTGC	1 cut(s)	480
BglII	AGATCT	1 cut(s)	1944
BisI	GCNGC	9 cut(s)	407, 567, 1509, 1541, 1860, 2019, 2421, 2694, 2697
BlpI	GCTNAGC	2 cut(s)	666, 1020
BlsI	GCNGC	9 cut(s)	408, 568, 1510, 1542, 1861, 2020, 2422, 2695, 2698
Bme1390I	CCNGG	5 cut(s)	171, 284, 434, 1612, 1613
Bme18I	GGWCC	5 cut(s)	189, 369, 424, 756, 2620
BmeT110I	CYCGRG	4 cut(s)	212, 1611, 2157, 2330
BmgT120I	GGNCC	6 cut(s)	163, 189, 369, 424, 756, 2620
BmiI	GGNNCC	8 cut(s)	425, 426, 1175, 1735, 2193, 2442, 2622, 2728
BmrFI	CCNGG	5 cut(s)	171, 284, 434, 1612, 1613
BmsI	GCATC	9 cut(s)	691, 1108, 1699, 1837, 1861, 2043, 2186, 2262, 2331
BpiI	GAAGAC	2 cut(s)	2072, 2105
BplI	GAGNNNNNCTC	4 cut(s)	1072, 1104, 1173, 1205
BpmI	CTGGAG	5 cut(s)	455, 1706, 1928, 2418, 2523
Bpu10I	CCTNAGC	1 cut(s)	675
Bpu1102I	GCTNAGC	2 cut(s)	666, 1020
BpuEI	CTTGAG	5 cut(s)	143, 1046, 1573, 2147, 2753
BpuMI	CCSGG	2 cut(s)	1612, 1613
BsaAI	YACGTR	1 cut(s)	1573
BsaBI	GATNNNNATC	1 cut(s)	115
BsaHI	GRCGYC	1 cut(s)	2727
BsaI	GGTCTC	1 cut(s)	461
BsaJI	CCNNGG	6 cut(s)	170, 282, 1591, 1611, 2703, 2722
BsaWI	WCCGGW	2 cut(s)	1525, 2075
BsaXI	ACNNNNNCTCC	2 cut(s)	332, 362
Bsc4I	CCNNNNNNNGG	6 cut(s)	171, 312, 433, 477, 910, 2046
Bse118I	RCCGGY	1 cut(s)	1525
Bse1I	ACTGG	7 cut(s)	247, 398, 601, 1128, 1455, 1824, 2571
Bse3DI	GCAATG	2 cut(s)	1676, 2007
Bse8I	GATNNNNATC	1 cut(s)	115
BseBI	CCWGG	3 cut(s)	171, 284, 434
BseDI	CCNNGG	6 cut(s)	170, 282, 1591, 1611, 2703, 2722
BseGI	GGATG	7 cut(s)	26, 973, 1006, 1481, 1852, 2034, 2713
BseJI	GATNNNNATC	1 cut(s)	115
BseLI	CCNNNNNNNGG	6 cut(s)	171, 312, 433, 477, 910, 2046
BseMI	GCAATG	2 cut(s)	1676, 2007
BseMII	CTCAG	2 cut(s)	1011, 2112
BseNI	ACTGG	7 cut(s)	247, 398, 601, 1128, 1455, 1824, 2571
BsePI	GCGCGC	1 cut(s)	1933
BseRI	GAGGAG	5 cut(s)	833, 953, 992, 1598, 1925
BseXI	GCAGC	8 cut(s)	418, 553, 1527, 1871, 2005, 2407, 2680, 2683
Bsh1236I	CGCG	1 cut(s)	1935
BshFI	GGCC	3 cut(s)	164, 690, 1469
BshNI	GGYRCC	4 cut(s)	1173, 1733, 2440, 2726
BshTI	ACCGGT	1 cut(s)	1525
BsiHKAI	GWGCWC	5 cut(s)	157, 219, 394, 1450, 2158
BsiHKCI	CYCGRG	4 cut(s)	212, 1611, 2157, 2330
BsiSI	CCGG	4 cut(s)	367, 1526, 1612, 2076
BslFI	GGGAC	4 cut(s)	437, 759, 2387, 2606
BslI	CCNNNNNNNGG	6 cut(s)	171, 312, 433, 477, 910, 2046
BsmAI	GTCTC	2 cut(s)	461, 908
BsmFI	GGGAC	4 cut(s)	437, 759, 2387, 2606
BsnI	GGCC	3 cut(s)	164, 690, 1469
Bso31I	GGTCTC	1 cut(s)	461
BsoBI	CYCGRG	4 cut(s)	212, 1611, 2157, 2330
Bsp1286I	GDGCHC	6 cut(s)	157, 219, 283, 394, 1450, 2158
Bsp1407I	TGTACA	1 cut(s)	2004
Bsp1720I	GCTNAGC	2 cut(s)	666, 1020
BspACI	CCGC	5 cut(s)	192, 920, 1473, 1508, 2760
BspANI	GGCC	3 cut(s)	164, 690, 1469
BspCNI	CTCAG	2 cut(s)	1012, 2113
BspFNI	CGCG	1 cut(s)	1935
BspHI	TCATGA	1 cut(s)	2548
BspLI	GGNNCC	8 cut(s)	425, 426, 1175, 1735, 2193, 2442, 2622, 2728
BspMAI	CTGCAG	1 cut(s)	2023
BspMI	ACCTGC	1 cut(s)	480
BspPI	GGATC	5 cut(s)	105, 1244, 2186, 2199, 2358
BspQI	GCTCTTC	3 cut(s)	48, 399, 2126
BspT107I	GGYRCC	4 cut(s)	1173, 1733, 2440, 2726
BspTNI	GGTCTC	1 cut(s)	461
BsrDI	GCAATG	2 cut(s)	1676, 2007
BsrFI	RCCGGY	1 cut(s)	1525
BsrGI	TGTACA	1 cut(s)	2004
BsrI	ACTGG	7 cut(s)	247, 398, 601, 1128, 1455, 1824, 2571
BssAI	RCCGGY	1 cut(s)	1525
BssECI	CCNNGG	6 cut(s)	170, 282, 1591, 1611, 2703, 2722
BssHII	GCGCGC	1 cut(s)	1933
BssNAI	GTATAC	1 cut(s)	2118
BssNI	GRCGYC	1 cut(s)	2727
BssSI	CACGAG	1 cut(s)	794
BssT1I	CCWWGG	3 cut(s)	1591, 2703, 2722
Bst1107I	GTATAC	1 cut(s)	2118
Bst2BI	CACGAG	1 cut(s)	794
Bst2UI	CCWGG	3 cut(s)	171, 284, 434
Bst4CI	ACNGT	6 cut(s)	750, 835, 844, 1246, 1378, 2184
Bst6I	CTCTTC	5 cut(s)	48, 399, 930, 957, 2126
BstACI	GRCGYC	1 cut(s)	2727
BstAPI	GCANNNNNTGC	2 cut(s)	301, 1865
BstAUI	TGTACA	1 cut(s)	2004
BstBAI	YACGTR	1 cut(s)	1573
BstDEI	CTNAG	6 cut(s)	666, 675, 1020, 1299, 1962, 2121
BstEII	GGTNACC	1 cut(s)	1517
BstF5I	GGATG	7 cut(s)	26, 973, 1006, 1481, 1852, 2034, 2713
BstFNI	CGCG	1 cut(s)	1935
BstH2I	RGCGCY	3 cut(s)	386, 1865, 2730
BstHHI	GCGC	5 cut(s)	385, 1864, 1935, 1937, 2729
BstMAI	GTCTC	2 cut(s)	461, 908
BstNI	CCWGG	3 cut(s)	171, 284, 434
BstNSI	RCATGY	3 cut(s)	898, 1760, 1996
BstPI	GGTNACC	1 cut(s)	1517
BstSCI	CCNGG	5 cut(s)	169, 282, 432, 1610, 1611
BstSFI	CTRYAG	2 cut(s)	2019, 2305
BstUI	CGCG	1 cut(s)	1935
BstV1I	GCAGC	8 cut(s)	418, 553, 1527, 1871, 2005, 2407, 2680, 2683
BstV2I	GAAGAC	2 cut(s)	2072, 2105
BstX2I	RGATCY	2 cut(s)	1944, 2191
BstYI	RGATCY	2 cut(s)	1944, 2191
BstZ17I	GTATAC	1 cut(s)	2118
BsuRI	GGCC	3 cut(s)	164, 690, 1469
BtsCI	GGATG	7 cut(s)	26, 973, 1006, 1481, 1852, 2034, 2713
BtsI	GCAGTG	2 cut(s)	1175, 1269
BtsIMutI	CAGTG	6 cut(s)	405, 591, 1175, 1269, 1383, 1448
BveI	ACCTGC	1 cut(s)	480
CaiI	CAGNNNCTG	2 cut(s)	1235, 1865
CciI	TCATGA	1 cut(s)	2548
CfoI	GCGC	5 cut(s)	385, 1864, 1935, 1937, 2729
Cfr10I	RCCGGY	1 cut(s)	1525
Cfr13I	GGNCC	6 cut(s)	163, 189, 369, 424, 756, 2620
Cfr9I	CCCGGG	1 cut(s)	1611
CseI	GACGC	1 cut(s)	412
Csp6I	GTAC	6 cut(s)	322, 430, 1306, 1734, 1750, 2005
CspAI	ACCGGT	1 cut(s)	1525
CviAII	CATG	8 cut(s)	895, 1058, 1757, 1979, 1993, 2228, 2246, 2549
CviQI	GTAC	6 cut(s)	322, 430, 1306, 1734, 1750, 2005
DdeI	CTNAG	6 cut(s)	666, 675, 1020, 1299, 1962, 2121
DinI	GGCGCC	1 cut(s)	2728
EaeI	YGGCCR	1 cut(s)	1467
Eam1104I	CTCTTC	5 cut(s)	48, 399, 930, 957, 2126
EarI	CTCTTC	5 cut(s)	48, 399, 930, 957, 2126
Ecl136II	GAGCTC	1 cut(s)	217
Eco130I	CCWWGG	3 cut(s)	1591, 2703, 2722
Eco147I	AGGCCT	1 cut(s)	690
Eco24I	GRGCYC	2 cut(s)	219, 283
Eco31I	GGTCTC	1 cut(s)	461
Eco47I	GGWCC	5 cut(s)	189, 369, 424, 756, 2620
Eco47III	AGCGCT	1 cut(s)	384
Eco53kI	GAGCTC	1 cut(s)	217
Eco57I	CTGAAG	3 cut(s)	101, 567, 2427
Eco88I	CYCGRG	4 cut(s)	212, 1611, 2157, 2330
Eco91I	GGTNACC	1 cut(s)	1517
EcoICRI	GAGCTC	1 cut(s)	217
EcoO109I	RGGNCCY	3 cut(s)	163, 424, 2620
EcoO65I	GGTNACC	1 cut(s)	1517
EcoRII	CCWGG	3 cut(s)	169, 282, 432
EcoT14I	CCWWGG	3 cut(s)	1591, 2703, 2722
EcoT22I	ATGCAT	1 cut(s)	1678
EcoT38I	GRGCYC	2 cut(s)	219, 283
EgeI	GGCGCC	1 cut(s)	2728
EheI	GGCGCC	1 cut(s)	2728
ErhI	CCWWGG	3 cut(s)	1591, 2703, 2722
FaeI	CATG	8 cut(s)	898, 1061, 1760, 1982, 1996, 2231, 2249, 2552
FalI	AAGNNNNNCTT	6 cut(s)	24, 56, 42, 74, 975, 1007
FaqI	GGGAC	4 cut(s)	437, 759, 2387, 2606
FatI	CATG	8 cut(s)	894, 1057, 1756, 1978, 1992, 2227, 2245, 2548
FauNDI	CATATG	1 cut(s)	1769
FblI	GTMKAC	1 cut(s)	2117
Fnu4HI	GCNGC	9 cut(s)	407, 567, 1509, 1541, 1860, 2019, 2421, 2694, 2697
FokI	GGATG	7 cut(s)	13, 980, 1013, 1468, 1859, 2021, 2720
FriOI	GRGCYC	2 cut(s)	219, 283
Fsp4HI	GCNGC	9 cut(s)	407, 567, 1509, 1541, 1860, 2019, 2421, 2694, 2697
FspBI	CTAG	4 cut(s)	549, 804, 1392, 1925
GlaI	GCGC	5 cut(s)	384, 1863, 1934, 1936, 2728
GluI	GCNGC	9 cut(s)	407, 567, 1509, 1541, 1860, 2019, 2421, 2694, 2697
GsuI	CTGGAG	5 cut(s)	455, 1706, 1928, 2418, 2523
HaeII	RGCGCY	3 cut(s)	386, 1865, 2730
HaeIII	GGCC	3 cut(s)	164, 690, 1469
HapII	CCGG	4 cut(s)	367, 1526, 1612, 2076
HgaI	GACGC	1 cut(s)	412
HhaI	GCGC	5 cut(s)	385, 1864, 1935, 1937, 2729
Hin1I	GRCGYC	1 cut(s)	2727
Hin1II	CATG	8 cut(s)	898, 1061, 1760, 1982, 1996, 2231, 2249, 2552
Hin6I	GCGC	5 cut(s)	383, 1862, 1933, 1935, 2727
HinP1I	GCGC	5 cut(s)	383, 1862, 1933, 1935, 2727
HincII	GTYRAC	1 cut(s)	1006
HindII	GTYRAC	1 cut(s)	1006
HindIII	AAGCTT	1 cut(s)	182
HinfI	GANTC	9 cut(s)	116, 316, 361, 869, 1312, 1604, 2400, 2510, 2579
HpaI	GTTAAC	1 cut(s)	1006
HpaII	CCGG	4 cut(s)	367, 1526, 1612, 2076
HphI	GGTGA	3 cut(s)	1375, 1504, 2723
Hpy166II	GTNNAC	7 cut(s)	354, 756, 1006, 1366, 1563, 1608, 2118
Hpy188I	TCNGA	9 cut(s)	65, 115, 360, 1533, 2191, 2203, 2267, 2355, 2584
Hpy8I	GTNNAC	7 cut(s)	354, 756, 1006, 1366, 1563, 1608, 2118
Hpy99I	CGWCG	1 cut(s)	416
HpyAV	CCTTC	7 cut(s)	50, 76, 176, 209, 382, 1024, 2272
HpyCH4III	ACNGT	6 cut(s)	750, 835, 844, 1246, 1378, 2184
HpyCH4IV	ACGT	4 cut(s)	1071, 1280, 1572, 1825
HpyF3I	CTNAG	6 cut(s)	666, 675, 1020, 1299, 1962, 2121
HpySE526I	ACGT	4 cut(s)	1071, 1280, 1572, 1825
Hsp92I	GRCGYC	1 cut(s)	2727
Hsp92II	CATG	8 cut(s)	898, 1061, 1760, 1982, 1996, 2231, 2249, 2552
HspAI	GCGC	5 cut(s)	383, 1862, 1933, 1935, 2727
KasI	GGCGCC	1 cut(s)	2726
KflI	GGGWCCC	1 cut(s)	424
KpnI	GGTACC	1 cut(s)	1737
KspAI	GTTAAC	1 cut(s)	1006
LguI	GCTCTTC	3 cut(s)	48, 399, 2126
LmnI	GCTCC	4 cut(s)	174, 340, 1096, 1445
Lsp1109I	GCAGC	8 cut(s)	418, 553, 1527, 1871, 2005, 2407, 2680, 2683
LweI	GCATC	9 cut(s)	691, 1108, 1699, 1837, 1861, 2043, 2186, 2262, 2331
MaeI	CTAG	4 cut(s)	549, 804, 1392, 1925
MaeII	ACGT	4 cut(s)	1071, 1280, 1572, 1825
MfeI	CAATTG	1 cut(s)	462
MflI	RGATCY	2 cut(s)	1944, 2191
MhlI	GDGCHC	6 cut(s)	157, 219, 283, 394, 1450, 2158
MlsI	TGGCCA	1 cut(s)	1469
MluNI	TGGCCA	1 cut(s)	1469
Mly113I	GGCGCC	1 cut(s)	2727
MlyI	GAGTC	3 cut(s)	355, 1613, 2409
MmeI	TCCRAC	1 cut(s)	624
Mox20I	TGGCCA	1 cut(s)	1469
Mph1103I	ATGCAT	1 cut(s)	1678
MroXI	GAANNNNTTC	3 cut(s)	57, 350, 2293
MscI	TGGCCA	1 cut(s)	1469
MseI	TTAA	5 cut(s)	1005, 1041, 1746, 2283, 2559
MslI	CAYNNNNRTG	1 cut(s)	2250
Msp20I	TGGCCA	1 cut(s)	1469
MspI	CCGG	4 cut(s)	367, 1526, 1612, 2076
MspR9I	CCNGG	5 cut(s)	171, 284, 434, 1612, 1613
MunI	CAATTG	1 cut(s)	462
MvaI	CCWGG	3 cut(s)	171, 284, 434
MvnI	CGCG	1 cut(s)	1935
NarI	GGCGCC	1 cut(s)	2727
NciI	CCSGG	2 cut(s)	1612, 1613
NdeI	CATATG	1 cut(s)	1769
NlaIII	CATG	8 cut(s)	898, 1061, 1760, 1982, 1996, 2231, 2249, 2552
NlaIV	GGNNCC	8 cut(s)	425, 426, 1175, 1735, 2193, 2442, 2622, 2728
NmeAIII	GCCGAG	1 cut(s)	595
NmuCI	GTSAC	2 cut(s)	400, 2711
NsiI	ATGCAT	1 cut(s)	1678
NspI	RCATGY	3 cut(s)	898, 1760, 1996
PaeI	GCATGC	1 cut(s)	898
PaeR7I	CTCGAG	1 cut(s)	212
PagI	TCATGA	1 cut(s)	2548
PauI	GCGCGC	1 cut(s)	1933
PceI	AGGCCT	1 cut(s)	690
PciI	ACATGT	1 cut(s)	1756
PciSI	GCTCTTC	3 cut(s)	48, 399, 2126
PcsI	WCGNNNNNNNCGW	2 cut(s)	111, 210
PdmI	GAANNNNTTC	3 cut(s)	57, 350, 2293
PfeI	GAWTC	6 cut(s)	116, 316, 869, 1312, 2510, 2579
PflMI	CCANNNNNTGG	2 cut(s)	312, 910
PinAI	ACCGGT	1 cut(s)	1525
PkrI	GCNGC	9 cut(s)	408, 568, 1510, 1542, 1861, 2020, 2422, 2695, 2698
PleI	GAGTC	3 cut(s)	355, 1612, 2408
PluTI	GGCGCC	1 cut(s)	2730
PpsI	GAGTC	3 cut(s)	355, 1612, 2408
Ppu21I	YACGTR	1 cut(s)	1573
PpuMI	RGGWCCY	2 cut(s)	424, 2620
PscI	ACATGT	1 cut(s)	1756
PsiI	TTATAA	1 cut(s)	140
Psp124BI	GAGCTC	1 cut(s)	219
Psp5II	RGGWCCY	2 cut(s)	424, 2620
Psp6I	CCWGG	3 cut(s)	169, 282, 432
PspEI	GGTNACC	1 cut(s)	1517
PspGI	CCWGG	3 cut(s)	169, 282, 432
PspN4I	GGNNCC	8 cut(s)	425, 426, 1175, 1735, 2193, 2442, 2622, 2728
PspPI	GGNCC	6 cut(s)	163, 189, 369, 424, 756, 2620
PspPPI	RGGWCCY	2 cut(s)	424, 2620
PspXI	VCTCGAGB	1 cut(s)	212
PsrI	GAACNNNNNNTAC	2 cut(s)	422, 454
PstI	CTGCAG	1 cut(s)	2023
PstNI	CAGNNNCTG	2 cut(s)	1235, 1865
PsuI	RGATCY	2 cut(s)	1944, 2191
PteI	GCGCGC	1 cut(s)	1933
RsaI	GTAC	6 cut(s)	323, 431, 1307, 1735, 1751, 2006
RsaNI	GTAC	6 cut(s)	322, 430, 1306, 1734, 1750, 2005
RseI	CAYNNNNRTG	1 cut(s)	2250
SacI	GAGCTC	1 cut(s)	219
SapI	GCTCTTC	3 cut(s)	48, 399, 2126
SaqAI	TTAA	5 cut(s)	1005, 1041, 1746, 2283, 2559
SatI	GCNGC	9 cut(s)	407, 567, 1509, 1541, 1860, 2019, 2421, 2694, 2697
Sau96I	GGNCC	6 cut(s)	163, 189, 369, 424, 756, 2620
SchI	GAGTC	3 cut(s)	355, 1613, 2409
ScrFI	CCNGG	5 cut(s)	171, 284, 434, 1612, 1613
SduI	GDGCHC	6 cut(s)	157, 219, 283, 394, 1450, 2158
SfaNI	GCATC	9 cut(s)	691, 1108, 1699, 1837, 1861, 2043, 2186, 2262, 2331
SfcI	CTRYAG	2 cut(s)	2019, 2305
SfoI	GGCGCC	1 cut(s)	2728
Sfr274I	CTCGAG	1 cut(s)	212
SinI	GGWCC	5 cut(s)	189, 369, 424, 756, 2620
SlaI	CTCGAG	1 cut(s)	212
SmaI	CCCGGG	1 cut(s)	1613
SmiMI	CAYNNNNRTG	1 cut(s)	2250
SmlI	CTYRAG	7 cut(s)	12, 158, 212, 1025, 1552, 2126, 2732
SmoI	CTYRAG	7 cut(s)	12, 158, 212, 1025, 1552, 2126, 2732
SphI	GCATGC	1 cut(s)	898
SseBI	AGGCCT	1 cut(s)	690
SsiI	CCGC	5 cut(s)	192, 920, 1473, 1508, 2760
SspDI	GGCGCC	1 cut(s)	2726
SspI	AATATT	2 cut(s)	1743, 2028
SspMI	CTAG	4 cut(s)	549, 804, 1392, 1925
SstI	GAGCTC	1 cut(s)	219
StuI	AGGCCT	1 cut(s)	690
StyD4I	CCNGG	5 cut(s)	169, 282, 432, 1610, 1611
StyI	CCWWGG	3 cut(s)	1591, 2703, 2722
TaaI	ACNGT	6 cut(s)	750, 835, 844, 1246, 1378, 2184
TaiI	ACGT	4 cut(s)	1074, 1283, 1575, 1828
TaqI	TCGA	8 cut(s)	5, 109, 213, 375, 611, 867, 994, 1090
TatI	WGTACW	1 cut(s)	2004
TauI	GCSGC	1 cut(s)	1511
TfiI	GAWTC	6 cut(s)	116, 316, 869, 1312, 2510, 2579
Tru1I	TTAA	5 cut(s)	1005, 1041, 1746, 2283, 2559
Tru9I	TTAA	5 cut(s)	1005, 1041, 1746, 2283, 2559
TscAI	CASTG	6 cut(s)	405, 591, 1175, 1269, 1383, 1455
TseFI	GTSAC	2 cut(s)	400, 2711
TseI	GCWGC	8 cut(s)	406, 566, 1540, 1859, 2018, 2420, 2693, 2696
Tsp45I	GTSAC	2 cut(s)	400, 2711
TspGWI	ACGGA	2 cut(s)	353, 1474
TspMI	CCCGGG	1 cut(s)	1611
TspRI	CASTG	6 cut(s)	405, 591, 1175, 1269, 1383, 1455
Van91I	CCANNNNNTGG	2 cut(s)	312, 910
VpaK11BI	GGWCC	5 cut(s)	189, 369, 424, 756, 2620
XapI	RAATTY	7 cut(s)	309, 524, 544, 728, 787, 1435, 1790
XceI	RCATGY	3 cut(s)	898, 1760, 1996
XhoI	CTCGAG	1 cut(s)	212
XmaI	CCCGGG	1 cut(s)	1611
XmiI	GTMKAC	1 cut(s)	2117
XmnI	GAANNNNTTC	3 cut(s)	57, 350, 2293
XspI	CTAG	4 cut(s)	549, 804, 1392, 1925
Zsp2I	ATGCAT	1 cut(s)	1678

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.