Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0001333

Physical Location & Seq

Genomic Coordinates Forward (+)

2316784 .. 2321613

Gene Structure 4830 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g04150.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGGCGATCTCTCAGGAGCTCTACCCCTCCCAAGACGACCTCCTCTACGAAGAAGAGCTTCTCCGAAACCCTTACAGCCTCAAGCTGTGGTGGCGCTACCTAATCGCCCGATCCGACGCGCCGTTCAAGAAGCGCCGCACCATCTACGAGCGCGCCGTCAAGTCCCTCCCCGGAAGCTACAAGCTTTGGCACGCCTACCTCCGCGAGCGCCTCGAACTCGTCCGGAGCTTCCCGATCAACCACTCCGAGTACGAAACCCTAAACAACACCTTCGAAAGGGCCCTGGTCACAATGCACAAGATGCCGCGGATTTGGATTCTGTATCTCCAGAGCCTGACGGAGCAGAGACTGGTCACCAGGACTCGCCGGAGCTTCGACAGGGCGCTGTGCGCTCTGCCGGTGCAGCAGCACGACCGGATTTGGGAGCTCTATTTGGTGTTTGTGAGCCAGAAAGGTATGCCGATCCAGACCTCGCTTCGGGTCTACCGGAGGTACTTGCTTTACGATCCTACTCATGTTGAGGATTTCATTGCGTTTTTGATTGACTCTGAGCTGTGGCAAGAGGCGGCGGAGCGGCTGGCCTCGGTGCTCAATGATGATCAGTTTAGGTCGATTAAGGGGAAGACGAAGCATAGGCTGTGGTTGGAGTTGTGTGATTTGCTTACTAAGAATGCCACGGCGGTTTCGGGGCTGAATGTGGATGCTATCATTAGAGGCGGGATTAAGAAGTTTACGGATGAGGTGGGGAGGCTGTGGACGTCGCTGGCGGATTATTATATTAAGAGGAGTTTGTTTGAGAAGGCTAGGGATGTGTTTGAGGAGGGTATGCAGACTGTGGTGACTGTTAGGGATTTTAGTGTGATTTTCGATGCGTATGCGCAGTTTGAGGAGAGTATGCTTGCGATTAAGATGGAGACGTTGGGGAGTGATGAGGAGGAGGAAGAGGAGGAGAAAGGAGAGAATGGGAGGATGGAAGATGATGGAAGTGAAGAGGAGGAGGAGGAAGATGTTCGGACCAATGTGGAGTTGTCCGTGGCTGAGCTTGAGAAGAAGATACTCCACGGGTTTTGGCTACATGATGAGAATGATGTCGATTTGAGGTTGGCGCGATTGGACCATCTTATGGATAGAAGACCTGAACTGGCTAATAGTGTGCTTTTGAGACAGAATCCGCATAATGTAGAGCAGTGGCATCGGAGAGTGAAGCTCTTTGAGGGAAATCCCACGAAGCAGATACTTACATATACCCAGGCTGTGAAGACTGTGGATCCAATGCAAGCAGTGGGGAAGCCTCATACTTTGTGGGTTGCTTTTGCTAAGCTGTATGAAACACATGGCGATCTTGCAAATGCAAGAGTCATTTTTGATAAGGCTGTCCAGGTGAACTACAAGACAGTGGACAATCTGGCTAGTCTGTGGTGTGAGTGGGCAGAAATGGAATTGCGGCATAAGAATTTTAAACGGGCCCTGGAACTGATGAGTAGAGCTACAGCAGAGCCATCTGTTGAGGTCAAACGAAGAGTTGCTGCTGATGGGAATCAACCAGTTCAGATGAGGCTCCATAAATCATTGAGGCTTTGGACCTTTTATGTGGACTTGGAGGAGAGCTTAGGTACACTAGAGTCTACACGGGCAGTGTACGAACGGATATTGGATTTGAGAATAGCCACCCCTCAAATTATAATCAACTATATGCATTCAAAGTTTATGAAAAAGGTACTCAAATATTCAAGTACCCGCATGTCAAAGACATATGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000349 GO:0000375 GO:0000377 GO:0000393 GO:0000398 GO:0000974 GO:0001701 GO:0001824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006259 GO:0006281 GO:0006283 GO:0006289 GO:0006351 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009790 GO:0009792 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0022607 GO:0022613 GO:0022618 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0033554 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043009 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048856 GO:0050896 GO:0051716 GO:0065003 GO:0071007 GO:0071010 GO:0071012 GO:0071013 GO:0071014 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

Suf

Protein Analysis

587

Amino Acids

69.04

Weight (kDa)

6.3

Isoelectric Point (pI)

52.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAT_Syf1_CNRKL1_N	PF23233	12 - 170	1.5e-58	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_N	PF23240	15 - 143	1.7e-08	PRP39 N-terminal HAT repeat
HAT_Syf1_M	PF23220	173 - 320	1.2e-58	Pre-mRNA-splicing factor SYF1 middle HAT repeat
HAT_Syf1_M	PF23220	358 - 422	5.4e-24	Pre-mRNA-splicing factor SYF1 middle HAT repeat
HAT_Syf1_CNRKL1_C	PF23231	424 - 818	2.2e-193	Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat
Suf	PF05843	430 - 670	2.9e-08	Suppressor of forked protein (Suf)
HAT_PRP39_C	PF23241	522 - 588	6.7e-06	PRP39 C-terminal HAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001333)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G28740
fragaria_vesca	FvH4_3g03910 FvH4_3g04150 FvH4_3g04150 FvH4_3g04150 FvH4_3g04150
malus_domestica	MD05G1324400.v1.1 MD10G1302200.v1.1
prunus_persica	Prupe.5G013200_v2.0.a1
pyrus_communis	pycom05g29860 pycom10g25470
rosa_chinensis	RchiOBHm_Chr5g0006181 RchiOBHm_Chr5g0006191 RchiOBHm_Chr5g0006201 RchiOBHm_Chr5g0006601 RchiOBHm_Chr7g0193971
rosa_laevigata	RLG00000004227 RLG00000031375 RLG00000031376 RLG00000031403
rosa_multiflora	Rmu_co7988368.1_g000001 Rmu_co8257165.1_g000001 Rmu_co8304153.1_g000001 Rmu_co8327759.1_g000001 Rmu_sc0001972.1_g000002 Rmu_sc0002389.1_g000006 Rmu_sc0004331.1_g000002 Rmu_sc0005583.1_g000001 Rmu_sc0009371.1_g000007 Rmu_sc0011154.1_g000005 Rmu_sc0024345.1_g000002 Rmu_sc0032392.1_g000001 Rmu_sc0032393.1_g000001
rosa_roxburghii	Rroxscaffold_1G00069420 Rroxscaffold_1G00069440 Rroxscaffold_1G00069800 Rroxscaffold_2G00122720 Rroxscaffold_3G00261670
rosa_rugosa	Rorug04G0422900
rosa_samantha	Rh5AG050200 Rh5BG046700 Rh5BG046800 Rh5BG049400 Rh5CG055400 Rh5CG055600 Rh5CG057800 Rh5DG046500 Rh5DG048800 Rh7AG139900 Rh7AG140000 Rh7DG141300
rosa_wichuraiana	Rw5G004790 Rw5G005020 Rw7G011940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1682
AatII	GACGTC	1 cut(s)	761
Acc16I	TGCGCA	1 cut(s)	879
AccB7I	CCANNNNNTGG	1 cut(s)	1123
AccBSI	CCGCTC	1 cut(s)	574
AccI	GTMKAC	2 cut(s)	483, 1625
AccII	CGCG	5 cut(s)	119, 153, 204, 307, 1108
AccIII	TCCGGA	1 cut(s)	222
AclWI	GGATC	5 cut(s)	105, 457, 500, 1262, 1275
AcsI	RAATTY	1 cut(s)	1453
AcyI	GRCGYC	1 cut(s)	758
AfaI	GTAC	6 cut(s)	251, 494, 1615, 1640, 1719, 1735
AfiI	CCNNNNNNNGG	4 cut(s)	276, 421, 477, 1123
AgsI	TTSAA	3 cut(s)	127, 1701, 1731
AjnI	CCWGG	5 cut(s)	282, 356, 1248, 1377, 1467
Alw21I	GWGCWC	3 cut(s)	21, 429, 591
Alw26I	GTCTC	3 cut(s)	340, 908, 1156
AlwI	GGATC	5 cut(s)	105, 457, 500, 1262, 1275
AlwNI	CAGNNNCTG	2 cut(s)	334, 349
Aor13HI	TCCGGA	1 cut(s)	222
AoxI	GGCC	3 cut(s)	279, 579, 1464
ApaI	GGGCCC	2 cut(s)	283, 1468
ApeKI	GCWGC	3 cut(s)	403, 406, 1526
ApoI	RAATTY	1 cut(s)	1453
Asp700I	GAANNNNTTC	2 cut(s)	57, 1008
AspS9I	GGNCC	7 cut(s)	279, 280, 1014, 1114, 1464, 1465, 1581
AsuC2I	CCSGG	1 cut(s)	171
AsuHPI	GGTGA	3 cut(s)	346, 850, 1393
AsuII	TTCGAA	1 cut(s)	273
AvaII	GGWCC	3 cut(s)	1014, 1114, 1581
BaeGI	GKGCMC	2 cut(s)	283, 1468
BamHI	GGATCC	1 cut(s)	1267
BanII	GRGCYC	4 cut(s)	21, 283, 429, 1468
BbsI	GAAGAC	3 cut(s)	629, 1138, 1265
Bbv12I	GWGCWC	3 cut(s)	21, 429, 591
BbvI	GCAGC	3 cut(s)	415, 418, 1513
BccI	CCATC	7 cut(s)	149, 904, 964, 974, 1125, 1507, 1526
BceAI	ACGGC	3 cut(s)	106, 140, 693
BcgI	CGANNNNNNTGC	4 cut(s)	857, 891, 1175, 1209
BciT130I	CCWGG	5 cut(s)	284, 358, 1250, 1379, 1469
BclI	TGATCA	1 cut(s)	598
BcnI	CCSGG	1 cut(s)	171
BcoDI	GTCTC	3 cut(s)	340, 908, 1156
BfaI	CTAG	3 cut(s)	804, 1410, 1619
BfmI	CTRYAG	1 cut(s)	1488
BfoI	RGCGCY	4 cut(s)	97, 136, 211, 386
BisI	GCNGC	8 cut(s)	136, 305, 404, 407, 567, 575, 1445, 1527
BlpI	GCTNAGC	2 cut(s)	1038, 1317
BlsI	GCNGC	8 cut(s)	137, 306, 405, 408, 568, 576, 1446, 1528
Bme1390I	CCNGG	6 cut(s)	171, 284, 358, 1250, 1379, 1469
Bme18I	GGWCC	3 cut(s)	1014, 1114, 1581
BmgT120I	GGNCC	7 cut(s)	279, 280, 1014, 1114, 1464, 1465, 1581
BmiI	GGNNCC	4 cut(s)	281, 1269, 1466, 1559
BmrFI	CCNGG	6 cut(s)	171, 284, 358, 1250, 1379, 1469
BmsI	GCATC	4 cut(s)	291, 691, 859, 1201
BpiI	GAAGAC	3 cut(s)	629, 1138, 1265
BplI	GAGNNNNNCTC	2 cut(s)	1191, 1223
BpmI	CTGGAG	1 cut(s)	311
Bpu10I	CCTNAGC	1 cut(s)	1609
Bpu1102I	GCTNAGC	2 cut(s)	1038, 1317
Bpu14I	TTCGAA	1 cut(s)	273
BpuEI	CTTGAG	2 cut(s)	65, 1064
BpuMI	CCSGG	1 cut(s)	171
BsaBI	GATNNNNATC	1 cut(s)	1536
BsaHI	GRCGYC	1 cut(s)	758
BsaJI	CCNNGG	9 cut(s)	169, 282, 305, 582, 675, 1032, 1060, 1248, 1467
BsaWI	WCCGGW	3 cut(s)	222, 414, 486
Bsc4I	CCNNNNNNNGG	4 cut(s)	276, 421, 477, 1123
Bse118I	RCCGGY	1 cut(s)	397
Bse1I	ACTGG	3 cut(s)	354, 1146, 1544
Bse3DI	GCAATG	1 cut(s)	528
Bse8I	GATNNNNATC	1 cut(s)	1536
BseAI	TCCGGA	1 cut(s)	222
BseBI	CCWGG	5 cut(s)	284, 358, 1250, 1379, 1469
BseDI	CCNNGG	9 cut(s)	169, 282, 305, 582, 675, 1032, 1060, 1248, 1467
BseGI	GGATG	4 cut(s)	706, 742, 814, 975
BseJI	GATNNNNATC	1 cut(s)	1536
BseLI	CCNNNNNNNGG	4 cut(s)	276, 421, 477, 1123
BseMI	GCAATG	1 cut(s)	528
BseMII	CTCAG	3 cut(s)	26, 540, 1029
BseNI	ACTGG	3 cut(s)	354, 1146, 1544
BsePI	GCGCGC	1 cut(s)	151
BseSI	GKGCMC	2 cut(s)	283, 1468
BseXI	GCAGC	3 cut(s)	415, 418, 1513
BsgI	GTGCAG	1 cut(s)	422
Bsh1236I	CGCG	5 cut(s)	119, 153, 204, 307, 1108
Bsh1285I	CGRYCG	1 cut(s)	415
BshFI	GGCC	3 cut(s)	281, 581, 1466
BsiEI	CGRYCG	1 cut(s)	415
BsiHKAI	GWGCWC	3 cut(s)	21, 429, 591
BsiSI	CCGG	6 cut(s)	171, 223, 367, 398, 415, 487
BslFI	GGGAC	1 cut(s)	148
BslI	CCNNNNNNNGG	4 cut(s)	276, 421, 477, 1123
BsmAI	GTCTC	3 cut(s)	340, 908, 1156
BsmBI	CGTCTC	1 cut(s)	908
BsmFI	GGGAC	1 cut(s)	148
BsmI	GAATGC	2 cut(s)	676, 1696
BsnI	GGCC	3 cut(s)	281, 581, 1466
Bsp119I	TTCGAA	1 cut(s)	273
Bsp120I	GGGCCC	2 cut(s)	279, 1464
Bsp1286I	GDGCHC	5 cut(s)	21, 283, 429, 591, 1468
Bsp13I	TCCGGA	1 cut(s)	222
Bsp143I	GATC	8 cut(s)	6, 110, 234, 462, 505, 598, 1267, 1339
Bsp1720I	GCTNAGC	2 cut(s)	1038, 1317
BspANI	GGCC	3 cut(s)	281, 581, 1466
BspCNI	CTCAG	3 cut(s)	25, 541, 1030
BspEI	TCCGGA	1 cut(s)	222
BspFNI	CGCG	5 cut(s)	119, 153, 204, 307, 1108
BspLI	GGNNCC	4 cut(s)	281, 1269, 1466, 1559
BspPI	GGATC	5 cut(s)	105, 457, 500, 1262, 1275
BspQI	GCTCTTC	1 cut(s)	48
BspT104I	TTCGAA	1 cut(s)	273
BsrBI	CCGCTC	1 cut(s)	574
BsrDI	GCAATG	1 cut(s)	528
BsrFI	RCCGGY	1 cut(s)	397
BsrI	ACTGG	3 cut(s)	354, 1146, 1544
BssAI	RCCGGY	1 cut(s)	397
BssECI	CCNNGG	9 cut(s)	169, 282, 305, 582, 675, 1032, 1060, 1248, 1467
BssHII	GCGCGC	1 cut(s)	151
BssMI	GATC	8 cut(s)	6, 110, 234, 462, 505, 598, 1267, 1339
BssNI	GRCGYC	1 cut(s)	758
Bst2UI	CCWGG	5 cut(s)	284, 358, 1250, 1379, 1469
Bst4CI	ACNGT	4 cut(s)	835, 844, 1264, 1396
Bst6I	CTCTTC	4 cut(s)	48, 936, 984, 1513
BstACI	GRCGYC	1 cut(s)	758
BstAPI	GCANNNNNTGC	1 cut(s)	301
BstBI	TTCGAA	1 cut(s)	273
BstC8I	GCNNGC	7 cut(s)	153, 192, 206, 579, 765, 900, 1278
BstDEI	CTNAG	6 cut(s)	12, 549, 666, 1038, 1317, 1609
BstDSI	CCRYGG	4 cut(s)	305, 675, 1032, 1060
BstEII	GGTNACC	1 cut(s)	352
BstENI	CCTNNNNNAGG	1 cut(s)	274
BstF5I	GGATG	4 cut(s)	706, 742, 814, 975
BstFNI	CGCG	5 cut(s)	119, 153, 204, 307, 1108
BstH2I	RGCGCY	4 cut(s)	97, 136, 211, 386
BstKTI	GATC	8 cut(s)	9, 113, 237, 465, 508, 601, 1270, 1342
BstMAI	GTCTC	3 cut(s)	340, 908, 1156
BstMBI	GATC	8 cut(s)	6, 110, 234, 462, 505, 598, 1267, 1339
BstMCI	CGRYCG	1 cut(s)	415
BstMWI	GCNNNNNNNGC	4 cut(s)	91, 301, 389, 403
BstNI	CCWGG	5 cut(s)	284, 358, 1250, 1379, 1469
BstNSI	RCATGY	1 cut(s)	1744
BstPI	GGTNACC	1 cut(s)	352
BstSCI	CCNGG	6 cut(s)	169, 282, 356, 1248, 1377, 1467
BstSFI	CTRYAG	1 cut(s)	1488
BstSLI	GKGCMC	2 cut(s)	283, 1468
BstUI	CGCG	5 cut(s)	119, 153, 204, 307, 1108
BstV1I	GCAGC	3 cut(s)	415, 418, 1513
BstV2I	GAAGAC	3 cut(s)	629, 1138, 1265
BstX2I	RGATCY	1 cut(s)	1267
BstYI	RGATCY	1 cut(s)	1267
BsuRI	GGCC	3 cut(s)	281, 581, 1466
BtgI	CCRYGG	4 cut(s)	305, 675, 1032, 1060
BtsCI	GGATG	4 cut(s)	706, 742, 814, 975
BtsI	GCAGTG	3 cut(s)	1193, 1287, 1641
BtsIMutI	CAGTG	4 cut(s)	1193, 1287, 1401, 1641
Cac8I	GCNNGC	7 cut(s)	153, 192, 206, 579, 765, 900, 1278
CaiI	CAGNNNCTG	2 cut(s)	334, 349
Cfr10I	RCCGGY	1 cut(s)	397
Cfr13I	GGNCC	7 cut(s)	279, 280, 1014, 1114, 1464, 1465, 1581
Cfr42I	CCGCGG	1 cut(s)	308
CseI	GACGC	1 cut(s)	125
Csp6I	GTAC	6 cut(s)	250, 493, 1614, 1639, 1718, 1734
CspCI	CAANNNNNGTGG	2 cut(s)	1049, 1084
CviAII	CATG	4 cut(s)	515, 1076, 1334, 1741
CviQI	GTAC	6 cut(s)	250, 493, 1614, 1639, 1718, 1734
DdeI	CTNAG	6 cut(s)	12, 549, 666, 1038, 1317, 1609
DpnI	GATC	8 cut(s)	8, 112, 236, 464, 507, 600, 1269, 1341
DpnII	GATC	8 cut(s)	6, 110, 234, 462, 505, 598, 1267, 1339
DraI	TTTAAA	1 cut(s)	1459
Eam1104I	CTCTTC	4 cut(s)	48, 936, 984, 1513
EarI	CTCTTC	4 cut(s)	48, 936, 984, 1513
EciI	GGCGGA	2 cut(s)	584, 782
Ecl136II	GAGCTC	2 cut(s)	19, 427
Eco24I	GRGCYC	4 cut(s)	21, 283, 429, 1468
Eco47I	GGWCC	3 cut(s)	1014, 1114, 1581
Eco53kI	GAGCTC	2 cut(s)	19, 427
Eco91I	GGTNACC	1 cut(s)	352
EcoICRI	GAGCTC	2 cut(s)	19, 427
EcoNI	CCTNNNNNAGG	1 cut(s)	274
EcoO109I	RGGNCCY	3 cut(s)	279, 280, 1465
EcoO65I	GGTNACC	1 cut(s)	352
EcoRII	CCWGG	5 cut(s)	282, 356, 1248, 1377, 1467
EcoT22I	ATGCAT	1 cut(s)	1698
EcoT38I	GRGCYC	4 cut(s)	21, 283, 429, 1468
Esp3I	CGTCTC	1 cut(s)	908
FaeI	CATG	4 cut(s)	518, 1079, 1337, 1744
FalI	AAGNNNNNCTT	2 cut(s)	42, 74
FaqI	GGGAC	1 cut(s)	148
FatI	CATG	4 cut(s)	514, 1075, 1333, 1740
FauI	CCCGC	2 cut(s)	710, 1745
FauNDI	CATATG	1 cut(s)	1753
FbaI	TGATCA	1 cut(s)	598
FblI	GTMKAC	2 cut(s)	483, 1625
Fnu4HI	GCNGC	8 cut(s)	136, 305, 404, 407, 567, 575, 1445, 1527
FokI	GGATG	4 cut(s)	713, 749, 821, 982
FriOI	GRGCYC	4 cut(s)	21, 283, 429, 1468
Fsp4HI	GCNGC	8 cut(s)	136, 305, 404, 407, 567, 575, 1445, 1527
FspBI	CTAG	3 cut(s)	804, 1410, 1619
FspI	TGCGCA	1 cut(s)	879
GluI	GCNGC	8 cut(s)	136, 305, 404, 407, 567, 575, 1445, 1527
GsuI	CTGGAG	1 cut(s)	311
HaeII	RGCGCY	4 cut(s)	97, 136, 211, 386
HaeIII	GGCC	3 cut(s)	281, 581, 1466
HapII	CCGG	6 cut(s)	171, 223, 367, 398, 415, 487
HgaI	GACGC	1 cut(s)	125
Hin1I	GRCGYC	1 cut(s)	758
Hin1II	CATG	4 cut(s)	518, 1079, 1337, 1744
HindIII	AAGCTT	1 cut(s)	182
HinfI	GANTC	7 cut(s)	316, 361, 545, 1168, 1356, 1537, 1622
HpaII	CCGG	6 cut(s)	171, 223, 367, 398, 415, 487
HphI	GGTGA	3 cut(s)	346, 850, 1393
Hpy166II	GTNNAC	9 cut(s)	484, 732, 756, 1384, 1399, 1594, 1616, 1626, 1639
Hpy188I	TCNGA	7 cut(s)	65, 115, 247, 550, 1014, 1197, 1551
Hpy188III	TCNNGA	6 cut(s)	14, 127, 223, 232, 328, 466
Hpy8I	GTNNAC	9 cut(s)	484, 732, 756, 1384, 1399, 1594, 1616, 1626, 1639
Hpy99I	CGWCG	2 cut(s)	119, 763
HpyAV	CCTTC	2 cut(s)	280, 793
HpyCH4III	ACNGT	4 cut(s)	835, 844, 1264, 1396
HpyCH4IV	ACGT	2 cut(s)	758, 917
HpyCH4V	TGCA	7 cut(s)	295, 403, 829, 1276, 1346, 1352, 1696
HpyF10VI	GCNNNNNNNGC	4 cut(s)	91, 301, 389, 403
HpyF3I	CTNAG	6 cut(s)	12, 549, 666, 1038, 1317, 1609
HpySE526I	ACGT	2 cut(s)	758, 917
Hsp92I	GRCGYC	1 cut(s)	758
Hsp92II	CATG	4 cut(s)	518, 1079, 1337, 1744
Kpn2I	TCCGGA	1 cut(s)	222
Ksp22I	TGATCA	1 cut(s)	598
KspI	CCGCGG	1 cut(s)	308
Kzo9I	GATC	8 cut(s)	6, 110, 234, 462, 505, 598, 1267, 1339
LguI	GCTCTTC	1 cut(s)	48
LmnI	GCTCC	7 cut(s)	16, 225, 340, 369, 424, 571, 1563
Lsp1109I	GCAGC	3 cut(s)	415, 418, 1513
LweI	GCATC	4 cut(s)	291, 691, 859, 1201
MaeI	CTAG	3 cut(s)	804, 1410, 1619
MaeII	ACGT	2 cut(s)	758, 917
MaeIII	GTNAC	3 cut(s)	286, 352, 838
MalI	GATC	8 cut(s)	8, 112, 236, 464, 507, 600, 1269, 1341
MbiI	CCGCTC	1 cut(s)	574
MboI	GATC	8 cut(s)	6, 110, 234, 462, 505, 598, 1267, 1339
MflI	RGATCY	1 cut(s)	1267
MhlI	GDGCHC	5 cut(s)	21, 283, 429, 591, 1468
MluCI	AATT	3 cut(s)	1439, 1453, 1677
MlyI	GAGTC	4 cut(s)	355, 539, 1365, 1631
MmeI	TCCRAC	2 cut(s)	138, 624
Mph1103I	ATGCAT	1 cut(s)	1698
MroI	TCCGGA	1 cut(s)	222
MroXI	GAANNNNTTC	2 cut(s)	57, 1008
MseI	TTAA	5 cut(s)	615, 723, 780, 906, 1458
MslI	CAYNNNNRTG	1 cut(s)	1756
MspA1I	CMGCKG	1 cut(s)	307
MspI	CCGG	6 cut(s)	171, 223, 367, 398, 415, 487
MspR9I	CCNGG	6 cut(s)	171, 284, 358, 1250, 1379, 1469
Mva1269I	GAATGC	2 cut(s)	676, 1696
MvaI	CCWGG	5 cut(s)	284, 358, 1250, 1379, 1469
MvnI	CGCG	5 cut(s)	119, 153, 204, 307, 1108
MwoI	GCNNNNNNNGC	4 cut(s)	91, 301, 389, 403
NciI	CCSGG	1 cut(s)	171
NdeI	CATATG	1 cut(s)	1753
NdeII	GATC	8 cut(s)	6, 110, 234, 462, 505, 598, 1267, 1339
NlaIII	CATG	4 cut(s)	518, 1079, 1337, 1744
NlaIV	GGNNCC	4 cut(s)	281, 1269, 1466, 1559
NmuCI	GTSAC	3 cut(s)	286, 352, 838
NsbI	TGCGCA	1 cut(s)	879
NsiI	ATGCAT	1 cut(s)	1698
NspI	RCATGY	1 cut(s)	1744
NspV	TTCGAA	1 cut(s)	273
PauI	GCGCGC	1 cut(s)	151
PciSI	GCTCTTC	1 cut(s)	48
PcsI	WCGNNNNNNNCGW	2 cut(s)	111, 153
PctI	GAATGC	2 cut(s)	676, 1696
PdmI	GAANNNNTTC	2 cut(s)	57, 1008
PfeI	GAWTC	3 cut(s)	316, 1168, 1537
PflMI	CCANNNNNTGG	1 cut(s)	1123
PkrI	GCNGC	8 cut(s)	137, 306, 405, 408, 568, 576, 1446, 1528
PleI	GAGTC	4 cut(s)	355, 539, 1364, 1630
PpsI	GAGTC	4 cut(s)	355, 539, 1364, 1630
PsiI	TTATAA	1 cut(s)	1682
Psp124BI	GAGCTC	2 cut(s)	21, 429
Psp6I	CCWGG	5 cut(s)	282, 356, 1248, 1377, 1467
PspEI	GGTNACC	1 cut(s)	352
PspGI	CCWGG	5 cut(s)	282, 356, 1248, 1377, 1467
PspN4I	GGNNCC	4 cut(s)	281, 1269, 1466, 1559
PspOMI	GGGCCC	2 cut(s)	279, 1464
PspPI	GGNCC	7 cut(s)	279, 280, 1014, 1114, 1464, 1465, 1581
PstNI	CAGNNNCTG	2 cut(s)	334, 349
PsuI	RGATCY	1 cut(s)	1267
PteI	GCGCGC	1 cut(s)	151
RsaI	GTAC	6 cut(s)	251, 494, 1615, 1640, 1719, 1735
RsaNI	GTAC	6 cut(s)	250, 493, 1614, 1639, 1718, 1734
RseI	CAYNNNNRTG	1 cut(s)	1756
SacI	GAGCTC	2 cut(s)	21, 429
SacII	CCGCGG	1 cut(s)	308
SapI	GCTCTTC	1 cut(s)	48
SaqAI	TTAA	5 cut(s)	615, 723, 780, 906, 1458
SatI	GCNGC	8 cut(s)	136, 305, 404, 407, 567, 575, 1445, 1527
Sau3AI	GATC	8 cut(s)	6, 110, 234, 462, 505, 598, 1267, 1339
Sau96I	GGNCC	7 cut(s)	279, 280, 1014, 1114, 1464, 1465, 1581
SchI	GAGTC	4 cut(s)	355, 539, 1365, 1631
ScrFI	CCNGG	6 cut(s)	171, 284, 358, 1250, 1379, 1469
SduI	GDGCHC	5 cut(s)	21, 283, 429, 591, 1468
SfaNI	GCATC	4 cut(s)	291, 691, 859, 1201
SfcI	CTRYAG	1 cut(s)	1488
Sfr303I	CCGCGG	1 cut(s)	308
SfuI	TTCGAA	1 cut(s)	273
SgrBI	CCGCGG	1 cut(s)	308
SinI	GGWCC	3 cut(s)	1014, 1114, 1581
SmiMI	CAYNNNNRTG	1 cut(s)	1756
SmlI	CTYRAG	2 cut(s)	80, 1043
SmoI	CTYRAG	2 cut(s)	80, 1043
Sse9I	AATT	3 cut(s)	1439, 1453, 1677
SspI	AATATT	1 cut(s)	1727
SspMI	CTAG	3 cut(s)	804, 1410, 1619
SstI	GAGCTC	2 cut(s)	21, 429
StyD4I	CCNGG	6 cut(s)	169, 282, 356, 1248, 1377, 1467
TaaI	ACNGT	4 cut(s)	835, 844, 1264, 1396
TaiI	ACGT	2 cut(s)	761, 920
TaqI	TCGA	6 cut(s)	213, 273, 375, 611, 867, 1092
TasI	AATT	3 cut(s)	1439, 1453, 1677
TauI	GCSGC	5 cut(s)	138, 307, 569, 577, 1447
TfiI	GAWTC	3 cut(s)	316, 1168, 1537
Tru1I	TTAA	5 cut(s)	615, 723, 780, 906, 1458
Tru9I	TTAA	5 cut(s)	615, 723, 780, 906, 1458
TscAI	CASTG	4 cut(s)	1193, 1287, 1401, 1641
TseFI	GTSAC	3 cut(s)	286, 352, 838
TseI	GCWGC	3 cut(s)	403, 406, 1526
Tsp45I	GTSAC	3 cut(s)	286, 352, 838
TspDTI	ATGAA	3 cut(s)	517, 1341, 1724
TspGWI	ACGGA	4 cut(s)	353, 749, 1021, 1660
TspRI	CASTG	4 cut(s)	1193, 1287, 1401, 1641
Van91I	CCANNNNNTGG	1 cut(s)	1123
VpaK11BI	GGWCC	3 cut(s)	1014, 1114, 1581
XagI	CCTNNNNNAGG	1 cut(s)	274
XapI	RAATTY	1 cut(s)	1453
XceI	RCATGY	1 cut(s)	1744
XmiI	GTMKAC	2 cut(s)	483, 1625
XmnI	GAANNNNTTC	2 cut(s)	57, 1008
XspI	CTAG	3 cut(s)	804, 1410, 1619
ZraI	GACGTC	1 cut(s)	759
Zsp2I	ATGCAT	1 cut(s)	1698

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.