Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0001333

Physical Location & Seq

Genomic Coordinates Reverse (-)

30206354 .. 30208761

Gene Structure 2408 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g29860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1668 bp

ATGGCGATCTCTCAGGAGCTATACCCATCGCAAGACGACCTGCTCTACGAAGAGGAGCTTCTCCGCAACCCATTCAGCCTCAAGCTATGGTGGCGCTACCTAATCGCTCGAGCCGAATCTCCGTTCAAGAAGCGCTTCATAATCTACGAGCGGGCCCTCAAGGCTCTGCCCGGAAGCTACAAGCTCTGGTACGCTTACCTCCGCGAAAGACTCGAGCTTGTAAGGAACTTGCCCATCACTCACTCGCAGTATGAAACACTAGTCAACACGTTTGAACGAGCCCTAGTGACGATGCACAAGATGCCCAGGATTTGGATTATGTACTTGCAGACTTTGACGGAGCAGAAATTGGTCACCAAGACTCGCCGGACCTTTGACAGAGCGCTGTGTGCTCTTCCCGTGACGCAGCACGATCGCATTTGGGAGCCCTACCTCGTGTTCGTGAGCCAAAAGGGCATCCCAATTGAGACCTCGCTTCGGGTTTATCGCAGGTATTTGAAATATGACCCTACCCATATTGAAGATTTCATCGAGTTCTTGATTAATTCTAGTCTTTGGCAAGAGACTGCCGAGAGGCTGGCTGCTGTGTTGAATGATGATAAGTTTTACTCGATAAAGGGGAAGACGAAACATAGGCTGTGGCTAGAATTGTGTGATTTGCTTACTAAGCATGCCACCGAGGTTTCGGGCCTCAATGTGGATGCTATAATTAGAGGTGGGATTAGGAAGTTTACAGATGAGGTGGGGCGGTTGTGGACCTCTCTTGCGGACTATTACATTAGAAGGAATTTGCATGAGAAGGCGAGGGATATATTTGAGGAGGGTATGACAACTGTCGTAACGGTGAGAGATTTTAGTGTGATTTTTGATTCGTATGCTCATTTTGAAGAGGTTGTGCTTGCCCATAAGATGGAAACTGCTGATTTGAGTGATGATGAGGAGGACAAAGAGAATGGGGTTGCGGAGGATGGAAATGAGGAGGAAGAAGATCTTCGATTGGATATTAACTTGTCTGTGGCTGAGCTTGAGAAGAAAATGCTTGATGGGTTTTGGTTACATGATGATAAGGATATAGATTTGAGATTAGCTCGATTGGACCATCTCATGGATAGAAGACCTGTACTAGCAAATAGTGTTCTTTTACGACAAAATCCTCATAATGTAGAGCAGTGGCACCGAAGAGTGAAGCTCTATGAGGGTAATCCCACCAAGCAGATACTTACTTACACTGAGGCAGTGAGGACAATTGATCCAATGAAAGCGGTTGGGAAGCCTCACACTTTGTGGGTTGCTTTTGCTAAGTTGTACGAGAACCACAATGATATTGTCAATGCCAGAGTGATTTTTGATAAAGCAGTGCAGGTGAATTACAAGACCGTGGATAATTTGGCTAGTCTGTGGTGTGAGTGGGCAGAAATGGAATTGAGGCATAAGAATTTCAAAGGAGCACTGGAACTGATGAGGCGGGCTACTGCAGAGCCATCTGTTGAGGTGAAACGAAGAGTGGCTGCTGATGGGAATGCACCGGTTCAGATGAAGCTGCATAAATGCTTGAGGATTTGGGCTTTTTATGTGGACTTGGAGGAGAGCCTGGGTAAATTAGAGTCCACTCGAGCTGTTTACGAGAGGATATTGGATTTGAAAATAGCCACACCGCATCGATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000349 GO:0000375 GO:0000377 GO:0000393 GO:0000398 GO:0000974 GO:0001701 GO:0001824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0006139 GO:0006259 GO:0006281 GO:0006283 GO:0006289 GO:0006351 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009790 GO:0009792 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0022607 GO:0022613 GO:0022618 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0033554 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043009 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048856 GO:0050896 GO:0051716 GO:0065003 GO:0071007 GO:0071010 GO:0071012 GO:0071013 GO:0071014 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0097659 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

Suf

Protein Analysis

556

Amino Acids

65.43

Weight (kDa)

6.44

Isoelectric Point (pI)

48.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAT_Syf1_CNRKL1_N	PF23233	12 - 170	5.7e-61	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
HAT_PRP39_C	PF23241	80 - 177	8.8e-06	PRP39 C-terminal HAT repeat
HAT_Syf1_M	PF23220	173 - 335	3.3e-58	Pre-mRNA-splicing factor SYF1 middle HAT repeat
HAT_Syf1_M	PF23220	345 - 416	1.3e-24	Pre-mRNA-splicing factor SYF1 middle HAT repeat
HAT_Syf1_CNRKL1_C	PF23231	418 - 553	3.3e-59	Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001333)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G28740
fragaria_vesca	FvH4_3g03910 FvH4_3g04150 FvH4_3g04150 FvH4_3g04150 FvH4_3g04150
malus_domestica	MD05G1324400.v1.1 MD10G1302200.v1.1
prunus_persica	Prupe.5G013200_v2.0.a1
pyrus_communis	pycom05g29860 pycom10g25470
rosa_chinensis	RchiOBHm_Chr5g0006181 RchiOBHm_Chr5g0006191 RchiOBHm_Chr5g0006201 RchiOBHm_Chr5g0006601 RchiOBHm_Chr7g0193971
rosa_laevigata	RLG00000004227 RLG00000031375 RLG00000031376 RLG00000031403
rosa_multiflora	Rmu_co7988368.1_g000001 Rmu_co8257165.1_g000001 Rmu_co8304153.1_g000001 Rmu_co8327759.1_g000001 Rmu_sc0001972.1_g000002 Rmu_sc0002389.1_g000006 Rmu_sc0004331.1_g000002 Rmu_sc0005583.1_g000001 Rmu_sc0009371.1_g000007 Rmu_sc0011154.1_g000005 Rmu_sc0024345.1_g000002 Rmu_sc0032392.1_g000001 Rmu_sc0032393.1_g000001
rosa_roxburghii	Rroxscaffold_1G00069420 Rroxscaffold_1G00069440 Rroxscaffold_1G00069800 Rroxscaffold_2G00122720 Rroxscaffold_3G00261670
rosa_rugosa	Rorug04G0422900
rosa_samantha	Rh5AG050200 Rh5BG046700 Rh5BG046800 Rh5BG049400 Rh5CG055400 Rh5CG055600 Rh5CG057800 Rh5DG046500 Rh5DG048800 Rh7AG139900 Rh7AG140000 Rh7DG141300
rosa_wichuraiana	Rw5G004790 Rw5G005020 Rw7G011940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1351
Acc36I	ACCTGC	3 cut(s)	48, 480, 1351
AccB1I	GGYRCC	1 cut(s)	1173
AccB7I	CCANNNNNTGG	3 cut(s)	312, 910, 1105
AccBSI	CCGCTC	1 cut(s)	151
AccII	CGCG	1 cut(s)	204
AciI	CCGC	9 cut(s)	64, 151, 202, 748, 767, 962, 1262, 1465, 1655
AclWI	GGATC	1 cut(s)	1244
AcsI	RAATTY	2 cut(s)	787, 1435
AdeI	CACNNNGTG	1 cut(s)	1284
AfaI	GTAC	4 cut(s)	191, 323, 1122, 1307
AfeI	AGCGCT	2 cut(s)	134, 384
AfiI	CCNNNNNNNGG	5 cut(s)	312, 477, 697, 910, 1105
AflIII	ACRYGT	1 cut(s)	267
AgeI	ACCGGT	1 cut(s)	1525
AgsI	TTSAA	8 cut(s)	127, 275, 499, 521, 592, 887, 1441, 1642
AhlI	ACTAGT	1 cut(s)	259
AjnI	CCWGG	2 cut(s)	305, 1590
Alw21I	GWGCWC	2 cut(s)	394, 1450
Alw26I	GTCTC	2 cut(s)	461, 557
AlwI	GGATC	1 cut(s)	1244
Ama87I	CYCGRG	3 cut(s)	108, 212, 1611
Aor51HI	AGCGCT	2 cut(s)	134, 384
AoxI	GGCC	2 cut(s)	153, 688
ApaI	GGGCCC	1 cut(s)	157
ApeKI	GCWGC	4 cut(s)	406, 581, 1508, 1540
ApoI	RAATTY	2 cut(s)	787, 1435
AseI	ATTAAT	1 cut(s)	543
AsiGI	ACCGGT	1 cut(s)	1525
Asp700I	GAANNNNTTC	2 cut(s)	134, 990
AspLEI	GCGC	3 cut(s)	96, 135, 385
AspS9I	GGNCC	6 cut(s)	153, 154, 369, 688, 756, 1096
AsuC2I	CCSGG	1 cut(s)	171
AsuHPI	GGTGA	4 cut(s)	346, 856, 1375, 1504
AvaI	CYCGRG	3 cut(s)	108, 212, 1611
AvaII	GGWCC	3 cut(s)	369, 756, 1096
BaeGI	GKGCMC	1 cut(s)	157
BanI	GGYRCC	1 cut(s)	1173
BanII	GRGCYC	3 cut(s)	157, 283, 429
BauI	CACGAG	1 cut(s)	434
BbsI	GAAGAC	2 cut(s)	629, 1120
Bbv12I	GWGCWC	2 cut(s)	394, 1450
BbvI	GCAGC	4 cut(s)	418, 568, 1495, 1527
BccI	CCATC	8 cut(s)	34, 242, 904, 962, 1037, 1107, 1489, 1508
BcgI	CGANNNNNNTGC	2 cut(s)	395, 429
BciT130I	CCWGG	2 cut(s)	307, 1592
BcnI	CCSGG	1 cut(s)	171
BcoDI	GTCTC	2 cut(s)	461, 557
BcuI	ACTAGT	1 cut(s)	259
BfaI	CTAG	6 cut(s)	260, 284, 549, 644, 1124, 1392
BfmI	CTRYAG	1 cut(s)	1473
BfoI	RGCGCY	3 cut(s)	97, 136, 386
BfuAI	ACCTGC	3 cut(s)	48, 480, 1351
BglI	GCCNNNNNGGC	2 cut(s)	161, 453
BglII	AGATCT	1 cut(s)	988
BisI	GCNGC	4 cut(s)	407, 582, 1509, 1541
BlpI	GCTNAGC	1 cut(s)	1020
BlsI	GCNGC	4 cut(s)	408, 583, 1510, 1542
Bme1390I	CCNGG	3 cut(s)	171, 307, 1592
Bme18I	GGWCC	3 cut(s)	369, 756, 1096
BmeT110I	CYCGRG	3 cut(s)	108, 212, 1611
BmgT120I	GGNCC	6 cut(s)	153, 154, 369, 688, 756, 1096
BmiI	GGNNCC	3 cut(s)	155, 426, 1175
BmrFI	CCNGG	3 cut(s)	171, 307, 1592
BmsI	GCATC	4 cut(s)	282, 291, 465, 691
BoxI	GACNNNNGTC	1 cut(s)	833
BpiI	GAAGAC	2 cut(s)	629, 1120
BplI	GAGNNNNNCTC	4 cut(s)	1072, 1104, 1173, 1205
Bpu1102I	GCTNAGC	1 cut(s)	1020
BpuEI	CTTGAG	4 cut(s)	65, 143, 1046, 1573
BpuMI	CCSGG	1 cut(s)	171
Bsa29I	ATCGAT	1 cut(s)	1660
BsaI	GGTCTC	1 cut(s)	461
BsaJI	CCNNGG	4 cut(s)	305, 678, 1377, 1591
BsaWI	WCCGGW	1 cut(s)	1525
Bsc4I	CCNNNNNNNGG	5 cut(s)	312, 477, 697, 910, 1105
Bse118I	RCCGGY	1 cut(s)	1525
Bse1I	ACTGG	1 cut(s)	1455
BseBI	CCWGG	2 cut(s)	307, 1592
BseCI	ATCGAT	1 cut(s)	1660
BseDI	CCNNGG	4 cut(s)	305, 678, 1377, 1591
BseGI	GGATG	3 cut(s)	456, 706, 973
BseLI	CCNNNNNNNGG	5 cut(s)	312, 477, 697, 910, 1105
BseMII	CTCAG	3 cut(s)	26, 1011, 1221
BseNI	ACTGG	1 cut(s)	1455
BseRI	GAGGAG	5 cut(s)	68, 833, 953, 992, 1598
BseSI	GKGCMC	1 cut(s)	157
BseXI	GCAGC	4 cut(s)	418, 568, 1495, 1527
BsgI	GTGCAG	1 cut(s)	1379
Bsh1236I	CGCG	1 cut(s)	204
Bsh1285I	CGRYCG	1 cut(s)	415
BshFI	GGCC	2 cut(s)	155, 690
BshNI	GGYRCC	1 cut(s)	1173
BshTI	ACCGGT	1 cut(s)	1525
BshVI	ATCGAT	1 cut(s)	1660
BsiEI	CGRYCG	1 cut(s)	415
BsiHKAI	GWGCWC	2 cut(s)	394, 1450
BsiHKCI	CYCGRG	3 cut(s)	108, 212, 1611
BsiSI	CCGG	3 cut(s)	171, 367, 1526
BslI	CCNNNNNNNGG	5 cut(s)	312, 477, 697, 910, 1105
BsmAI	GTCTC	2 cut(s)	461, 557
BsmI	GAATGC	1 cut(s)	1525
BsnI	GGCC	2 cut(s)	155, 690
Bso31I	GGTCTC	1 cut(s)	461
BsoBI	CYCGRG	3 cut(s)	108, 212, 1611
Bsp120I	GGGCCC	1 cut(s)	153
Bsp1286I	GDGCHC	5 cut(s)	157, 283, 394, 429, 1450
Bsp143I	GATC	5 cut(s)	6, 412, 988, 1249, 1661
Bsp1720I	GCTNAGC	1 cut(s)	1020
BspACI	CCGC	9 cut(s)	64, 151, 202, 748, 767, 962, 1262, 1465, 1655
BspANI	GGCC	2 cut(s)	155, 690
BspCNI	CTCAG	3 cut(s)	25, 1012, 1222
BspDI	ATCGAT	1 cut(s)	1660
BspFNI	CGCG	1 cut(s)	204
BspLI	GGNNCC	3 cut(s)	155, 426, 1175
BspMAI	CTGCAG	1 cut(s)	1477
BspMI	ACCTGC	3 cut(s)	48, 480, 1351
BspPI	GGATC	1 cut(s)	1244
BspQI	GCTCTTC	1 cut(s)	399
BspT107I	GGYRCC	1 cut(s)	1173
BspTNI	GGTCTC	1 cut(s)	461
BsrBI	CCGCTC	1 cut(s)	151
BsrFI	RCCGGY	1 cut(s)	1525
BsrI	ACTGG	1 cut(s)	1455
BssAI	RCCGGY	1 cut(s)	1525
BssECI	CCNNGG	4 cut(s)	305, 678, 1377, 1591
BssMI	GATC	5 cut(s)	6, 412, 988, 1249, 1661
BssSI	CACGAG	1 cut(s)	434
Bst2BI	CACGAG	1 cut(s)	434
Bst2UI	CCWGG	2 cut(s)	307, 1592
Bst4CI	ACNGT	3 cut(s)	835, 844, 1378
Bst6I	CTCTTC	5 cut(s)	45, 399, 882, 1174, 1495
BstAPI	GCANNNNNTGC	1 cut(s)	301
BstC8I	GCNNGC	5 cut(s)	153, 579, 672, 900, 1467
BstDEI	CTNAG	5 cut(s)	12, 666, 1020, 1230, 1299
BstDSI	CCRYGG	1 cut(s)	1377
BstEII	GGTNACC	1 cut(s)	352
BstF5I	GGATG	3 cut(s)	456, 706, 973
BstFNI	CGCG	1 cut(s)	204
BstH2I	RGCGCY	3 cut(s)	97, 136, 386
BstHHI	GCGC	3 cut(s)	96, 135, 385
BstKTI	GATC	5 cut(s)	9, 415, 991, 1252, 1664
BstMAI	GTCTC	2 cut(s)	461, 557
BstMBI	GATC	5 cut(s)	6, 412, 988, 1249, 1661
BstMCI	CGRYCG	1 cut(s)	415
BstMWI	GCNNNNNNNGC	6 cut(s)	91, 161, 301, 389, 453, 667
BstNI	CCWGG	2 cut(s)	307, 1592
BstNSI	RCATGY	1 cut(s)	674
BstPAI	GACNNNNGTC	1 cut(s)	833
BstPI	GGTNACC	1 cut(s)	352
BstSCI	CCNGG	3 cut(s)	169, 305, 1590
BstSFI	CTRYAG	1 cut(s)	1473
BstSLI	GKGCMC	1 cut(s)	157
BstUI	CGCG	1 cut(s)	204
BstV1I	GCAGC	4 cut(s)	418, 568, 1495, 1527
BstV2I	GAAGAC	2 cut(s)	629, 1120
BstX2I	RGATCY	1 cut(s)	988
BstYI	RGATCY	1 cut(s)	988
Bsu15I	ATCGAT	1 cut(s)	1660
BsuRI	GGCC	2 cut(s)	155, 690
BsuTUI	ATCGAT	1 cut(s)	1660
BtgI	CCRYGG	1 cut(s)	1377
BtgZI	GCGATG	1 cut(s)	12
BtsCI	GGATG	3 cut(s)	456, 706, 973
BtsI	GCAGTG	3 cut(s)	1175, 1242, 1362
BtsIMutI	CAGTG	5 cut(s)	1175, 1227, 1242, 1362, 1448
BveI	ACCTGC	3 cut(s)	48, 480, 1351
Cac8I	GCNNGC	5 cut(s)	153, 579, 672, 900, 1467
CfoI	GCGC	3 cut(s)	96, 135, 385
Cfr10I	RCCGGY	1 cut(s)	1525
Cfr13I	GGNCC	6 cut(s)	153, 154, 369, 688, 756, 1096
ClaI	ATCGAT	1 cut(s)	1660
CseI	GACGC	1 cut(s)	412
Csp6I	GTAC	4 cut(s)	190, 322, 1121, 1306
CspAI	ACCGGT	1 cut(s)	1525
CviAII	CATG	4 cut(s)	671, 794, 1058, 1105
CviQI	GTAC	4 cut(s)	190, 322, 1121, 1306
DdeI	CTNAG	5 cut(s)	12, 666, 1020, 1230, 1299
DpnI	GATC	5 cut(s)	8, 414, 990, 1251, 1663
DpnII	GATC	5 cut(s)	6, 412, 988, 1249, 1661
DraIII	CACNNNGTG	1 cut(s)	1284
Eam1104I	CTCTTC	5 cut(s)	45, 399, 882, 1174, 1495
EarI	CTCTTC	5 cut(s)	45, 399, 882, 1174, 1495
Eco24I	GRGCYC	3 cut(s)	157, 283, 429
Eco31I	GGTCTC	1 cut(s)	461
Eco47I	GGWCC	3 cut(s)	369, 756, 1096
Eco47III	AGCGCT	2 cut(s)	134, 384
Eco88I	CYCGRG	3 cut(s)	108, 212, 1611
Eco91I	GGTNACC	1 cut(s)	352
EcoO109I	RGGNCCY	1 cut(s)	154
EcoO65I	GGTNACC	1 cut(s)	352
EcoRII	CCWGG	2 cut(s)	305, 1590
EcoT38I	GRGCYC	3 cut(s)	157, 283, 429
FaeI	CATG	4 cut(s)	674, 797, 1061, 1108
FalI	AAGNNNNNCTT	6 cut(s)	42, 74, 119, 151, 975, 1007
FatI	CATG	4 cut(s)	670, 793, 1057, 1104
FauI	CCCGC	2 cut(s)	144, 1458
Fnu4HI	GCNGC	4 cut(s)	407, 582, 1509, 1541
FokI	GGATG	3 cut(s)	443, 713, 980
FriOI	GRGCYC	3 cut(s)	157, 283, 429
Fsp4HI	GCNGC	4 cut(s)	407, 582, 1509, 1541
FspBI	CTAG	6 cut(s)	260, 284, 549, 644, 1124, 1392
GlaI	GCGC	3 cut(s)	95, 134, 384
GluI	GCNGC	4 cut(s)	407, 582, 1509, 1541
HaeII	RGCGCY	3 cut(s)	97, 136, 386
HaeIII	GGCC	2 cut(s)	155, 690
HapII	CCGG	3 cut(s)	171, 367, 1526
HgaI	GACGC	1 cut(s)	412
HhaI	GCGC	3 cut(s)	96, 135, 385
Hin1II	CATG	4 cut(s)	674, 797, 1061, 1108
Hin6I	GCGC	3 cut(s)	94, 133, 383
HinP1I	GCGC	3 cut(s)	94, 133, 383
HincII	GTYRAC	1 cut(s)	265
HindII	GTYRAC	1 cut(s)	265
HinfI	GANTC	5 cut(s)	116, 210, 361, 869, 1604
HpaII	CCGG	3 cut(s)	171, 367, 1526
HphI	GGTGA	4 cut(s)	346, 856, 1375, 1504
Hpy166II	GTNNAC	6 cut(s)	265, 732, 756, 1576, 1608, 1621
Hpy188I	TCNGA	1 cut(s)	1533
Hpy188III	TCNNGA	4 cut(s)	14, 127, 442, 538
Hpy8I	GTNNAC	6 cut(s)	265, 732, 756, 1576, 1608, 1621
HpyAV	CCTTC	2 cut(s)	777, 793
HpyCH4III	ACNGT	3 cut(s)	835, 844, 1378
HpyCH4IV	ACGT	1 cut(s)	269
HpyCH4V	TGCA	7 cut(s)	295, 328, 793, 1360, 1475, 1523, 1543
HpyF10VI	GCNNNNNNNGC	6 cut(s)	91, 161, 301, 389, 453, 667
HpyF3I	CTNAG	5 cut(s)	12, 666, 1020, 1230, 1299
HpySE526I	ACGT	1 cut(s)	269
Hsp92II	CATG	4 cut(s)	674, 797, 1061, 1108
HspAI	GCGC	3 cut(s)	94, 133, 383
Kzo9I	GATC	5 cut(s)	6, 412, 988, 1249, 1661
LguI	GCTCTTC	1 cut(s)	399
LmnI	GCTCC	5 cut(s)	16, 55, 340, 424, 1445
Lsp1109I	GCAGC	4 cut(s)	418, 568, 1495, 1527
LweI	GCATC	4 cut(s)	282, 291, 465, 691
MaeI	CTAG	6 cut(s)	260, 284, 549, 644, 1124, 1392
MaeII	ACGT	1 cut(s)	269
MaeIII	GTNAC	5 cut(s)	286, 352, 400, 838, 1053
MalI	GATC	5 cut(s)	8, 414, 990, 1251, 1663
MbiI	CCGCTC	1 cut(s)	151
MboI	GATC	5 cut(s)	6, 412, 988, 1249, 1661
MfeI	CAATTG	2 cut(s)	462, 1245
MflI	RGATCY	1 cut(s)	988
MhlI	GDGCHC	5 cut(s)	157, 283, 394, 429, 1450
MlyI	GAGTC	3 cut(s)	204, 355, 1613
MroXI	GAANNNNTTC	2 cut(s)	134, 990
MseI	TTAA	2 cut(s)	543, 1005
MspI	CCGG	3 cut(s)	171, 367, 1526
MspR9I	CCNGG	3 cut(s)	171, 307, 1592
MunI	CAATTG	2 cut(s)	462, 1245
Mva1269I	GAATGC	1 cut(s)	1525
MvaI	CCWGG	2 cut(s)	307, 1592
MvnI	CGCG	1 cut(s)	204
MwoI	GCNNNNNNNGC	6 cut(s)	91, 161, 301, 389, 453, 667
NciI	CCSGG	1 cut(s)	171
NdeII	GATC	5 cut(s)	6, 412, 988, 1249, 1661
NlaIII	CATG	4 cut(s)	674, 797, 1061, 1108
NlaIV	GGNNCC	3 cut(s)	155, 426, 1175
NmeAIII	GCCGAG	1 cut(s)	595
NmuCI	GTSAC	3 cut(s)	286, 352, 400
NspI	RCATGY	1 cut(s)	674
PaeI	GCATGC	1 cut(s)	674
PaeR7I	CTCGAG	3 cut(s)	108, 212, 1611
PaqCI	CACCTGC	1 cut(s)	1351
PciSI	GCTCTTC	1 cut(s)	399
PcsI	WCGNNNNNNNCGW	1 cut(s)	111
PctI	GAATGC	1 cut(s)	1525
PdmI	GAANNNNTTC	2 cut(s)	134, 990
PfeI	GAWTC	2 cut(s)	116, 869
PflMI	CCANNNNNTGG	3 cut(s)	312, 910, 1105
PinAI	ACCGGT	1 cut(s)	1525
PkrI	GCNGC	4 cut(s)	408, 583, 1510, 1542
Ple19I	CGATCG	1 cut(s)	415
PleI	GAGTC	3 cut(s)	204, 355, 1612
PpsI	GAGTC	3 cut(s)	204, 355, 1612
PshAI	GACNNNNGTC	1 cut(s)	833
PshBI	ATTAAT	1 cut(s)	543
Psp6I	CCWGG	2 cut(s)	305, 1590
PspEI	GGTNACC	1 cut(s)	352
PspGI	CCWGG	2 cut(s)	305, 1590
PspN4I	GGNNCC	3 cut(s)	155, 426, 1175
PspOMI	GGGCCC	1 cut(s)	153
PspPI	GGNCC	6 cut(s)	153, 154, 369, 688, 756, 1096
PspXI	VCTCGAGB	3 cut(s)	108, 212, 1611
PstI	CTGCAG	1 cut(s)	1477
PsuI	RGATCY	1 cut(s)	988
PvuI	CGATCG	1 cut(s)	415
RsaI	GTAC	4 cut(s)	191, 323, 1122, 1307
RsaNI	GTAC	4 cut(s)	190, 322, 1121, 1306
SapI	GCTCTTC	1 cut(s)	399
SaqAI	TTAA	2 cut(s)	543, 1005
SatI	GCNGC	4 cut(s)	407, 582, 1509, 1541
Sau3AI	GATC	5 cut(s)	6, 412, 988, 1249, 1661
Sau96I	GGNCC	6 cut(s)	153, 154, 369, 688, 756, 1096
SchI	GAGTC	3 cut(s)	204, 355, 1613
ScrFI	CCNGG	3 cut(s)	171, 307, 1592
SduI	GDGCHC	5 cut(s)	157, 283, 394, 429, 1450
SfaNI	GCATC	4 cut(s)	282, 291, 465, 691
SfcI	CTRYAG	1 cut(s)	1473
Sfr274I	CTCGAG	3 cut(s)	108, 212, 1611
SinI	GGWCC	3 cut(s)	369, 756, 1096
SlaI	CTCGAG	3 cut(s)	108, 212, 1611
SmlI	CTYRAG	7 cut(s)	80, 108, 158, 212, 1025, 1552, 1611
SmoI	CTYRAG	7 cut(s)	80, 108, 158, 212, 1025, 1552, 1611
SpeI	ACTAGT	1 cut(s)	259
SphI	GCATGC	1 cut(s)	674
SsiI	CCGC	9 cut(s)	64, 151, 202, 748, 767, 962, 1262, 1465, 1655
SspMI	CTAG	6 cut(s)	260, 284, 549, 644, 1124, 1392
StyD4I	CCNGG	3 cut(s)	169, 305, 1590
TaaI	ACNGT	3 cut(s)	835, 844, 1378
TaiI	ACGT	1 cut(s)	272
TaqI	TCGA	8 cut(s)	109, 213, 531, 611, 994, 1090, 1612, 1660
TatI	WGTACW	2 cut(s)	321, 1120
TfiI	GAWTC	2 cut(s)	116, 869
Tru1I	TTAA	2 cut(s)	543, 1005
Tru9I	TTAA	2 cut(s)	543, 1005
TscAI	CASTG	5 cut(s)	1175, 1234, 1242, 1362, 1455
TseFI	GTSAC	3 cut(s)	286, 352, 400
TseI	GCWGC	4 cut(s)	406, 581, 1508, 1540
Tsp45I	GTSAC	3 cut(s)	286, 352, 400
TspDTI	ATGAA	5 cut(s)	127, 267, 517, 1271, 1550
TspGWI	ACGGA	2 cut(s)	111, 353
TspRI	CASTG	5 cut(s)	1175, 1234, 1242, 1362, 1455
Van91I	CCANNNNNTGG	3 cut(s)	312, 910, 1105
VpaK11BI	GGWCC	3 cut(s)	369, 756, 1096
VspI	ATTAAT	1 cut(s)	543
XapI	RAATTY	2 cut(s)	787, 1435
XceI	RCATGY	1 cut(s)	674
XhoI	CTCGAG	3 cut(s)	108, 212, 1611
XmnI	GAANNNNTTC	2 cut(s)	134, 990
XspI	CTAG	6 cut(s)	260, 284, 549, 644, 1124, 1392

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.