FvH4_1g02510

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
1402921 .. 1405288
2368 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g02510.t1

Sequence Viewer

Length: 1479 bp
ATGACCAGAAGCTTTCGATACCCTGCACTATATTTGTTAATTATATTAGCTTTTGTTCTCCTCCTCCTGATATTTGCACCTTTACTGACCAAAAACAATCTCATCAGCATTCCGTTCCTTTCCTTTCTCACTAGTACACCTTTCATCAATCCAGATCACTTCAACTACACAATAACCCCACCGCAAGTTTGTTTAGATGAGTTCCTCACAGGCTCCAGGCATCCAATTCGAAGGAGTAGGCACGACGTTAATGGTACCAAAGCCAAAAATAAGACTAGTTTGGAGAGACTTGAAGAAGGTTTAGCTAAAGCTAGAGCATCAATACTCGATGCGATTCGGTTTAAAAACTATACCTCAGAGAGAGAAGAGACTTTTATCCCAAGAGGAAGCATTTACAAAAATCCTTATGCGTTTCACCAGAGCCACATAGAGATGATCAAGAGGTTCAAGATTTGGAGCTACAAGGAAGGAGAACGTCCATTAGTGCATTTGGGTCCGATGTATAAGAGGAAATATGATATGGAAGGTTATTTCATAGATGAAATAGAGAGGGAGGAGATCCCATTTAGGGCTAAACATCCTGATGAGGCACACATGTTCTTCCTCCCTTTTAGTGTTGCCTTCATCGTTGATTATGTGTACGAGCCTATCATAACTAGAGAGGAATACCACCCTAATCGCCTACAACAGATTGTCATGGACTACGTAACCGTCGTGGCACATAAGTACCCGTACTGGAATAGAACCAATGGTGCTGACCATTTTATGGTTTCATGTCATGACTGGGGACGGAAAATTTCAGTAGGTCACTCGGAGCTTTACAAGAACTTTGTTAGAGTACTTTGCAATGCCAACACCTCAGAAGGGTTTGAACCTAGAAGAGATGTTTCACTACCTCAAGTTTTTTTACAATCTGGAGAGCCTGGCCCGTCCAATCTGGCTCATCAATCCCCACGCAGTCGCCGGACTCTGGCATTCTATGCCGGTGGTGCTCATGGACTGATACGAGCTATCTTGCTCCATCATTGGAAGGGCAAAGATAACAAAGTTCAAGTCTACGAGACTGTTCCCGAAAGCATGAACTACACCGCACTAATGGAACATAGCAAGTTTTGCTTGTGCCCTAGTGGTACTGAAGTGGCAACCCCAAGAGTTGTGGAGGCAATTTACGCAGGGTGTGTTCCGGTGATAATATCTGACAACTACACACTACCCTTAAGCGATGTCCTCAATTGGAGCCAATTTTCGGTTAACATTGCCGTTGCGAAAATACCAGAAATCAAGACCATCTTACAAGCGATTCCATATAAGGAGTACCTAAAGATGCAGAGAAGGGTTTTGAAAGTACAGAGGCATTTTGTACTCAACAAGCCGGCTAAGCCTTTTGATGTGATTCACATGATACTTCACTCAGTGTGGCTGAGACGAATTAACATTAAGCTACTTGACCGAGATGAACACATTAATTCACGCGTGTAA

Protein Analysis

493

Amino Acids

57.26

Weight (kDa)

9.31

Isoelectric Point (pI)

48.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 132 - 434 8.9e-58 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 254
AccB1I GGYRCC 1 cut(s) 254
AccB7I CCANNNNNTGG 1 cut(s) 766
AccI GTMKAC 1 cut(s) 1056
AccII CGCG 1 cut(s) 1473
AciI CCGC 2 cut(s) 182, 1089
AclWI GGATC 1 cut(s) 553
AcsI RAATTY 1 cut(s) 795
AcuI CTGAAG 1 cut(s) 1155
AdeI CACNNNGTG 1 cut(s) 1414
AfiI CCNNNNNNNGG 5 cut(s) 568, 766, 864, 970, 1246
AflII CTTAAG 1 cut(s) 1216
AflIII ACRYGT 2 cut(s) 594, 1471
AgsI TTSAA 6 cut(s) 163, 293, 448, 872, 1052, 1342
AhlI ACTAGT 2 cut(s) 131, 275
AjnI CCWGG 2 cut(s) 215, 922
AluBI AGCT 8 cut(s) 12, 50, 305, 311, 459, 817, 1010, 1441
AluI AGCT 8 cut(s) 12, 50, 305, 311, 459, 817, 1010, 1441
Alw21I GWGCWC 1 cut(s) 994
Alw26I GTCTC 4 cut(s) 280, 362, 1055, 1417
AlwI GGATC 1 cut(s) 553
AoxI GGCC 1 cut(s) 925
ApoI RAATTY 1 cut(s) 795
ArsI GACNNNNNNTTYG 2 cut(s) 1038, 1070
AseI ATTAAT 1 cut(s) 1464
Asp718I GGTACC 1 cut(s) 254
AspS9I GGNCC 2 cut(s) 494, 926
AsuHPI GGTGA 2 cut(s) 407, 1198
AsuII TTCGAA 1 cut(s) 229
AvaII GGWCC 1 cut(s) 494
BaeGI GKGCMC 1 cut(s) 1124
BaeI ACNNNNGTAYC 4 cut(s) 710, 743, 1122, 1155
BanI GGYRCC 1 cut(s) 254
Bbv12I GWGCWC 1 cut(s) 994
BccI CCATC 2 cut(s) 1029, 1295
BceAI ACGGC 1 cut(s) 1244
BcgI CGANNNNNNTGC 2 cut(s) 209, 243
BciT130I CCWGG 2 cut(s) 217, 924
BclI TGATCA 1 cut(s) 435
BcoDI GTCTC 4 cut(s) 280, 362, 1055, 1417
BcuI ACTAGT 2 cut(s) 131, 275
BfaI CTAG 6 cut(s) 132, 276, 312, 657, 876, 1125
BfrI CTTAAG 1 cut(s) 1216
BlpI GCTNAGC 1 cut(s) 1377
BmcAI AGTACT 1 cut(s) 840
Bme1390I CCNGG 2 cut(s) 217, 924
Bme18I GGWCC 1 cut(s) 494
BmgT120I GGNCC 2 cut(s) 494, 926
BmiI GGNNCC 4 cut(s) 214, 256, 495, 1238
BmrFI CCNGG 2 cut(s) 217, 924
BmrI ACTGGG 1 cut(s) 793
BmsI GCATC 4 cut(s) 229, 319, 326, 1314
BmuI ACTGGG 1 cut(s) 793
BpmI CTGGAG 2 cut(s) 199, 936
Bpu1102I GCTNAGC 1 cut(s) 1377
Bpu14I TTCGAA 1 cut(s) 229
BpuEI CTTGAG 1 cut(s) 882
BsaAI YACGTR 1 cut(s) 706
BsaWI WCCGGW 1 cut(s) 1183
Bsc4I CCNNNNNNNGG 5 cut(s) 568, 766, 864, 970, 1246
Bse118I RCCGGY 2 cut(s) 983, 1372
Bse1I ACTGG 2 cut(s) 740, 788
Bse3DI GCAATG 2 cut(s) 853, 1254
BseBI CCWGG 2 cut(s) 217, 924
BseGI GGATG 2 cut(s) 220, 577
BseLI CCNNNNNNNGG 5 cut(s) 568, 766, 864, 970, 1246
BseMI GCAATG 2 cut(s) 853, 1254
BseMII CTCAG 4 cut(s) 369, 873, 1412, 1425
BseNI ACTGG 2 cut(s) 740, 788
BseRI GAGGAG 3 cut(s) 50, 53, 569
BseSI GKGCMC 1 cut(s) 1124
BsgI GTGCAG 1 cut(s) 9
Bsh1236I CGCG 1 cut(s) 1473
BshFI GGCC 1 cut(s) 927
BshNI GGYRCC 1 cut(s) 254
BsiHKAI GWGCWC 1 cut(s) 994
BsiSI CCGG 4 cut(s) 964, 984, 1184, 1373
BslFI GGGAC 1 cut(s) 801
BslI CCNNNNNNNGG 5 cut(s) 568, 766, 864, 970, 1246
BsmAI GTCTC 4 cut(s) 280, 362, 1055, 1417
BsmBI CGTCTC 1 cut(s) 1417
BsmFI GGGAC 1 cut(s) 801
BsmI GAATGC 2 cut(s) 108, 974
BsnI GGCC 1 cut(s) 927
Bsp119I TTCGAA 1 cut(s) 229
Bsp1286I GDGCHC 2 cut(s) 994, 1124
Bsp143I GATC 3 cut(s) 154, 435, 558
Bsp1720I GCTNAGC 1 cut(s) 1377
BspACI CCGC 2 cut(s) 182, 1089
BspANI GGCC 1 cut(s) 927
BspCNI CTCAG 4 cut(s) 368, 872, 1413, 1424
BspFNI CGCG 1 cut(s) 1473
BspHI TCATGA 1 cut(s) 778
BspLI GGNNCC 4 cut(s) 214, 256, 495, 1238
BspPI GGATC 1 cut(s) 553
BspT104I TTCGAA 1 cut(s) 229
BspT107I GGYRCC 1 cut(s) 254
BspTI CTTAAG 1 cut(s) 1216
BsrDI GCAATG 2 cut(s) 853, 1254
BsrFI RCCGGY 2 cut(s) 983, 1372
BsrI ACTGG 2 cut(s) 740, 788
BssAI RCCGGY 2 cut(s) 983, 1372
BssMI GATC 3 cut(s) 154, 435, 558
Bst2UI CCWGG 2 cut(s) 217, 924
Bst4CI ACNGT 2 cut(s) 712, 1066
Bst6I CTCTTC 2 cut(s) 360, 874
BstAFI CTTAAG 1 cut(s) 1216
BstAPI GCANNNNNTGC 2 cut(s) 980, 1113
BstBAI YACGTR 1 cut(s) 706
BstBI TTCGAA 1 cut(s) 229
BstC8I GCNNGC 1 cut(s) 1374
BstDEI CTNAG 5 cut(s) 355, 859, 1377, 1411, 1421
BstF5I GGATG 2 cut(s) 220, 577
BstFNI CGCG 1 cut(s) 1473
BstKTI GATC 3 cut(s) 157, 438, 561
BstMAI GTCTC 4 cut(s) 280, 362, 1055, 1417
BstMBI GATC 3 cut(s) 154, 435, 558
BstMWI GCNNNNNNNGC 5 cut(s) 980, 989, 1113, 1169, 1378
BstNI CCWGG 2 cut(s) 217, 924
BstNSI RCATGY 1 cut(s) 598
BstSCI CCNGG 2 cut(s) 215, 922
BstSLI GKGCMC 1 cut(s) 1124
BstSNI TACGTA 1 cut(s) 706
BstUI CGCG 1 cut(s) 1473
BstX2I RGATCY 1 cut(s) 558
BstYI RGATCY 1 cut(s) 558
BsuRI GGCC 1 cut(s) 927
BtgZI GCGATG 1 cut(s) 1236
BtsCI GGATG 2 cut(s) 220, 577
BtsIMutI CAGTG 1 cut(s) 1419
Cac8I GCNNGC 1 cut(s) 1374
CciI TCATGA 1 cut(s) 778
Cfr10I RCCGGY 2 cut(s) 983, 1372
Cfr13I GGNCC 2 cut(s) 494, 926
CspCI CAANNNNNGTGG 2 cut(s) 1137, 1172
CviAII CATG 7 cut(s) 595, 697, 774, 779, 995, 1078, 1399
DdeI CTNAG 5 cut(s) 355, 859, 1377, 1411, 1421
DpnI GATC 3 cut(s) 156, 437, 560
DpnII GATC 3 cut(s) 154, 435, 558
DraI TTTAAA 1 cut(s) 343
DraIII CACNNNGTG 1 cut(s) 1414
Eam1104I CTCTTC 2 cut(s) 360, 874
EarI CTCTTC 2 cut(s) 360, 874
Eco105I TACGTA 1 cut(s) 706
Eco47I GGWCC 1 cut(s) 494
Eco57I CTGAAG 1 cut(s) 1155
EcoRII CCWGG 2 cut(s) 215, 922
Esp3I CGTCTC 1 cut(s) 1417
FaeI CATG 7 cut(s) 598, 700, 777, 782, 998, 1081, 1402
FalI AAGNNNNNCTT 4 cut(s) 1100, 1132, 1274, 1306
FaqI GGGAC 1 cut(s) 801
FatI CATG 7 cut(s) 594, 696, 773, 778, 994, 1077, 1398
FbaI TGATCA 1 cut(s) 435
FblI GTMKAC 1 cut(s) 1056
FokI GGATG 2 cut(s) 207, 564
FspBI CTAG 6 cut(s) 132, 276, 312, 657, 876, 1125
GsuI CTGGAG 2 cut(s) 199, 936
HaeIII GGCC 1 cut(s) 927
HapII CCGG 4 cut(s) 964, 984, 1184, 1373
Hin1II CATG 7 cut(s) 598, 700, 777, 782, 998, 1081, 1402
HincII GTYRAC 1 cut(s) 1252
HindII GTYRAC 1 cut(s) 1252
HindIII AAGCTT 1 cut(s) 10
HinfI GANTC 4 cut(s) 334, 967, 1300, 1393
HpaI GTTAAC 1 cut(s) 1252
HpaII CCGG 4 cut(s) 964, 984, 1184, 1373
HphI GGTGA 2 cut(s) 407, 1198
Hpy166II GTNNAC 4 cut(s) 137, 640, 1057, 1252
Hpy188I TCNGA 5 cut(s) 358, 498, 814, 862, 1198
Hpy188III TCNNGA 9 cut(s) 67, 152, 439, 448, 581, 779, 915, 1070, 1282
Hpy8I GTNNAC 4 cut(s) 137, 640, 1057, 1252
Hpy99I CGWCG 2 cut(s) 248, 716
HpyAV CCTTC 8 cut(s) 225, 290, 461, 518, 631, 857, 1024, 1326
HpyCH4III ACNGT 2 cut(s) 712, 1066
HpyCH4IV ACGT 3 cut(s) 246, 475, 705
HpyCH4V TGCA 5 cut(s) 26, 77, 487, 846, 1327
HpyF10VI GCNNNNNNNGC 5 cut(s) 980, 989, 1113, 1169, 1378
HpyF3I CTNAG 5 cut(s) 355, 859, 1377, 1411, 1421
HpySE526I ACGT 3 cut(s) 246, 475, 705
Hsp92II CATG 7 cut(s) 598, 700, 777, 782, 998, 1081, 1402
KpnI GGTACC 1 cut(s) 258
KroI GCCGGC 1 cut(s) 1372
KroNI GCCGGC 1 cut(s) 1374
Ksp22I TGATCA 1 cut(s) 435
KspAI GTTAAC 1 cut(s) 1252
Kzo9I GATC 3 cut(s) 154, 435, 558
LmnI GCTCC 5 cut(s) 218, 456, 814, 1023, 1236
LweI GCATC 4 cut(s) 229, 319, 326, 1314
MaeI CTAG 6 cut(s) 132, 276, 312, 657, 876, 1125
MaeII ACGT 3 cut(s) 246, 475, 705
MaeIII GTNAC 2 cut(s) 706, 806
MalI GATC 3 cut(s) 156, 437, 560
MboI GATC 3 cut(s) 154, 435, 558
MboII GAAGA 4 cut(s) 305, 377, 592, 891
MfeI CAATTG 1 cut(s) 1231
MflI RGATCY 1 cut(s) 558
MhlI GDGCHC 2 cut(s) 994, 1124
MluCI AATT 8 cut(s) 39, 225, 795, 1164, 1231, 1241, 1428, 1465
MluI ACGCGT 1 cut(s) 1471
MlyI GAGTC 1 cut(s) 961
MroNI GCCGGC 1 cut(s) 1372
MseI TTAA 8 cut(s) 38, 249, 342, 1217, 1251, 1431, 1437, 1464
MslI CAYNNNNRTG 2 cut(s) 431, 582
MspCI CTTAAG 1 cut(s) 1216
MspI CCGG 4 cut(s) 964, 984, 1184, 1373
MspR9I CCNGG 2 cut(s) 217, 924
MunI CAATTG 1 cut(s) 1231
Mva1269I GAATGC 2 cut(s) 108, 974
MvaI CCWGG 2 cut(s) 217, 924
MvnI CGCG 1 cut(s) 1473
MwoI GCNNNNNNNGC 5 cut(s) 980, 989, 1113, 1169, 1378
NaeI GCCGGC 1 cut(s) 1374
NdeII GATC 3 cut(s) 154, 435, 558
NgoMIV GCCGGC 1 cut(s) 1372
NlaIII CATG 7 cut(s) 598, 700, 777, 782, 998, 1081, 1402
NlaIV GGNNCC 4 cut(s) 214, 256, 495, 1238
NmuCI GTSAC 1 cut(s) 806
NspI RCATGY 1 cut(s) 598
NspV TTCGAA 1 cut(s) 229
PagI TCATGA 1 cut(s) 778
PciI ACATGT 1 cut(s) 594
PcsI WCGNNNNNNNCGW 1 cut(s) 711
PctI GAATGC 2 cut(s) 108, 974
PdiI GCCGGC 1 cut(s) 1374
PfeI GAWTC 3 cut(s) 334, 1300, 1393
PflMI CCANNNNNTGG 1 cut(s) 766
PleI GAGTC 1 cut(s) 961
PpsI GAGTC 1 cut(s) 961
Ppu21I YACGTR 1 cut(s) 706
PscI ACATGT 1 cut(s) 594
PshBI ATTAAT 1 cut(s) 1464
Psp6I CCWGG 2 cut(s) 215, 922
PspGI CCWGG 2 cut(s) 215, 922
PspN4I GGNNCC 4 cut(s) 214, 256, 495, 1238
PspPI GGNCC 2 cut(s) 494, 926
PsuI RGATCY 1 cut(s) 558
RseI CAYNNNNRTG 2 cut(s) 431, 582
SaqAI TTAA 8 cut(s) 38, 249, 342, 1217, 1251, 1431, 1437, 1464
Sau3AI GATC 3 cut(s) 154, 435, 558
Sau96I GGNCC 2 cut(s) 494, 926
ScaI AGTACT 1 cut(s) 840
SchI GAGTC 1 cut(s) 961
ScrFI CCNGG 2 cut(s) 217, 924
SduI GDGCHC 2 cut(s) 994, 1124
SfaNI GCATC 4 cut(s) 229, 319, 326, 1314
SfuI TTCGAA 1 cut(s) 229
SinI GGWCC 1 cut(s) 494
SmiMI CAYNNNNRTG 2 cut(s) 431, 582
SmlI CTYRAG 2 cut(s) 897, 1216
SmoI CTYRAG 2 cut(s) 897, 1216
SnaBI TACGTA 1 cut(s) 706
SpeI ACTAGT 2 cut(s) 131, 275
Sse9I AATT 8 cut(s) 39, 225, 795, 1164, 1231, 1241, 1428, 1465
SsiI CCGC 2 cut(s) 182, 1089
SspMI CTAG 6 cut(s) 132, 276, 312, 657, 876, 1125
StyD4I CCNGG 2 cut(s) 215, 922
TaaI ACNGT 2 cut(s) 712, 1066
TaiI ACGT 3 cut(s) 249, 478, 708
TaqI TCGA 3 cut(s) 16, 229, 327
TaqII GACCGA 1 cut(s) 1464
TasI AATT 8 cut(s) 39, 225, 795, 1164, 1231, 1241, 1428, 1465
TatI WGTACW 4 cut(s) 134, 838, 1345, 1360
TfiI GAWTC 3 cut(s) 334, 1300, 1393
Tru1I TTAA 8 cut(s) 38, 249, 342, 1217, 1251, 1431, 1437, 1464
Tru9I TTAA 8 cut(s) 38, 249, 342, 1217, 1251, 1431, 1437, 1464
TscAI CASTG 1 cut(s) 1419
TseFI GTSAC 1 cut(s) 806
Tsp45I GTSAC 1 cut(s) 806
TspDTI ATGAA 7 cut(s) 133, 523, 555, 613, 762, 1094, 1470
TspGWI ACGGA 2 cut(s) 102, 805
TspRI CASTG 1 cut(s) 1419
Van91I CCANNNNNTGG 1 cut(s) 766
Vha464I CTTAAG 1 cut(s) 1216
VpaK11BI GGWCC 1 cut(s) 494
VspI ATTAAT 1 cut(s) 1464
XapI RAATTY 1 cut(s) 795
XceI RCATGY 1 cut(s) 598
XmiI GTMKAC 1 cut(s) 1056
XspI CTAG 6 cut(s) 132, 276, 312, 657, 876, 1125
ZrmI AGTACT 1 cut(s) 840
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.