MD04G1243400.v1.1

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
31979913 .. 31983051
3139 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1243400.v1.1.491

Sequence Viewer

Length: 1419 bp
ATGGCAGCCTTTGAATTCCGGTCACCCTACTTTTTCTCTCTAACTTTTCTCCTCCTCCTCCTCCTTCTCCTCCTCTCCTTCTCCCCCTTCAACCAATTCCATTTCACCCCCTTAAATCCTCATTCTTCCCCATCTGCCCCTCTCCAAATCAGAAATCACACAGCCTCATATCAATATGCCACTCTGAATCCTGCACCCTCTCCCTCTCCCTCTCCTTCCACTGTTGCAGACAATCTCCAAGAAAAGAGCAGCACAAGCAGCAAGATTGAAGAGGAGTTGGCGAGAGCCAGAGCCGCCATCCGCGAAGCCATTCGTACCAAAAACTACACATCTGACAGACAAGAAATTTACATCCCCAGAGGAAGTATCTACAGAAATCCCTATGCTTTTCACCAGAGTCACATAGAGATGGTGAAAAGATTCAAGATATGGGCCTACAAGGAAGGGGAGATACCCATGTTTCACAATGGGCCTATGTCCTACATCTACTCTATCGAAGGCCATTTCATCGATGAGCTGGACAGTAGTGGCAAAAGCCCATTTTTGGCCCGACATCACGACGAGGCCCATTCCTTCTTTGTCCCTGTGAGTGTGAAGAGGATAGCTGATTTCTTGTACGACCGGCCTAACCCCTACACATTTCACGGTCGACTGGTTCGAATCGTCACCGATTACATCAATGTGGTTGCCCAGAAATACCCCTACTGGAATAGGAGCAGTGGAGCTGACCATTTCATGCTCTCTTGTCATGATTGGGCACCGGAAATTATAGACGACGACCGTGACTTCTACAAGAATTTTATAAGAGTACTATGCAATTCCAATACCTCAGAAGGGTTCCAGCCCAAGAGAGACGTCTCGTTACCGGAATACAATATACCGGAGCACACTCTTGGTCCATCGCTCCTTGACCAACACCCCGATAAGCGTCCTATCCTAGCCTTCTTCGCCGGTGGTGCTCATGGAGACATAAGGAAGTTCTTGTTTGAGCATTGGAGGGACAAAGATGATGAAATCCAAGTCCATGAGTACCTTCCAAAGGGCCAAAATTACCACGAGATTATGGGACGGACCAAGTTTTGTTTGTGTCCCAGTGGCTCCGAAGTTGCTAGCCCTAGAGTGGTTGAGGCCATGTATGCAGGGTGCGTCCCTGTCCTCATTTCCGATTACTATTCATTGCCCTTCGCTGATGTTCTTGATTGGAGTAAGTTTACGGTTGAAATCCCGCCCAAGAGAATACCGGAGATTAAGACGATCCTGAAAGCCGTTCCACACTCAGAGTTCTTGAAGTTGCAGAAGAGGGTGATGCAGGTTAGAAGGCATTTTATGCTGAACCGACCGGCGAAGCCGTATGATGTGTTTCATATGGTGCTTCACTCAATATGGCTAAGGAGGCTTGACATCAGGCTACCAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

473

Amino Acids

54.86

Weight (kDa)

8.4

Isoelectric Point (pI)

55.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 125 - 422 4.6e-59 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 803
AatII GACGTC 1 cut(s) 858
Acc36I ACCTGC 1 cut(s) 1300
AccB1I GGYRCC 1 cut(s) 757
AccI GTMKAC 1 cut(s) 649
AccII CGCG 1 cut(s) 303
AciI CCGC 3 cut(s) 294, 301, 1226
AclWI GGATC 1 cut(s) 1249
AcsI RAATTY 3 cut(s) 14, 345, 796
AcyI GRCGYC 1 cut(s) 855
AfaI GTAC 4 cut(s) 316, 617, 810, 1031
AfiI CCNNNNNNNGG 4 cut(s) 544, 834, 1039, 1120
AgsI TTSAA 6 cut(s) 14, 91, 269, 424, 1220, 1288
AluBI AGCT 3 cut(s) 517, 605, 725
AluI AGCT 3 cut(s) 517, 605, 725
Alw21I GWGCWC 2 cut(s) 888, 961
Alw26I GTCTC 3 cut(s) 846, 862, 960
AlwI GGATC 1 cut(s) 1249
AoxI GGCC 8 cut(s) 432, 470, 499, 546, 564, 623, 1042, 1128
ApeKI GCWGC 3 cut(s) 5, 249, 258
ApoI RAATTY 3 cut(s) 14, 345, 796
Asp700I GAANNNNTTC 2 cut(s) 309, 419
AspS9I GGNCC 7 cut(s) 432, 470, 547, 565, 896, 1042, 1071
AsuHPI GGTGA 6 cut(s) 15, 97, 383, 424, 658, 1315
AsuII TTCGAA 1 cut(s) 658
AsuNHI GCTAGC 1 cut(s) 1109
AvaII GGWCC 2 cut(s) 896, 1071
BaeGI GKGCMC 1 cut(s) 760
BaeI ACNNNNGTAYC 2 cut(s) 443, 476
BanI GGYRCC 1 cut(s) 757
BarI GAAGNNNNNNTAC 2 cut(s) 435, 467
BauI CACGAG 1 cut(s) 1055
Bbv12I GWGCWC 2 cut(s) 888, 961
BbvI GCAGC 3 cut(s) 17, 261, 270
BccI CCATC 4 cut(s) 139, 305, 403, 907
BceAI ACGGC 2 cut(s) 1250, 1333
BcoDI GTCTC 3 cut(s) 846, 862, 960
BfaI CTAG 3 cut(s) 938, 1110, 1116
BfmI CTRYAG 1 cut(s) 370
BfuAI ACCTGC 1 cut(s) 1300
BisI GCNGC 4 cut(s) 6, 250, 259, 294
BlsI GCNGC 4 cut(s) 7, 251, 260, 295
BmcAI AGTACT 1 cut(s) 810
Bme18I GGWCC 2 cut(s) 896, 1071
BmgT120I GGNCC 7 cut(s) 432, 470, 547, 565, 896, 1042, 1071
BmiI GGNNCC 3 cut(s) 759, 839, 1099
BmrI ACTGGG 1 cut(s) 1086
BmsI GCATC 1 cut(s) 1296
BmtI GCTAGC 1 cut(s) 1113
BmuI ACTGGG 1 cut(s) 1086
Bpu10I CCTNAGC 1 cut(s) 1388
Bpu14I TTCGAA 1 cut(s) 658
Bsa29I ATCGAT 1 cut(s) 510
BsaHI GRCGYC 1 cut(s) 855
BsaWI WCCGGW 5 cut(s) 18, 760, 865, 880, 1240
Bsc4I CCNNNNNNNGG 4 cut(s) 544, 834, 1039, 1120
Bse118I RCCGGY 3 cut(s) 621, 950, 1339
Bse1I ACTGG 3 cut(s) 657, 710, 1092
Bse3DI GCAATG 1 cut(s) 1175
BseCI ATCGAT 1 cut(s) 510
BseGI GGATG 2 cut(s) 297, 351
BseLI CCNNNNNNNGG 4 cut(s) 544, 834, 1039, 1120
BseMI GCAATG 1 cut(s) 1175
BseMII CTCAG 2 cut(s) 843, 1290
BseNI ACTGG 3 cut(s) 657, 710, 1092
BseRI GAGGAG 7 cut(s) 41, 44, 47, 50, 59, 62, 287
BseSI GKGCMC 1 cut(s) 760
BseXI GCAGC 3 cut(s) 17, 261, 270
BsgI GTGCAG 1 cut(s) 177
Bsh1236I CGCG 1 cut(s) 303
Bsh1285I CGRYCG 4 cut(s) 622, 649, 781, 1340
BshFI GGCC 8 cut(s) 434, 472, 501, 548, 566, 625, 1044, 1130
BshNI GGYRCC 1 cut(s) 757
BshVI ATCGAT 1 cut(s) 510
BsiEI CGRYCG 4 cut(s) 622, 649, 781, 1340
BsiHKAI GWGCWC 2 cut(s) 888, 961
BsiSI CCGG 8 cut(s) 19, 622, 761, 866, 881, 951, 1241, 1340
BslFI GGGAC 5 cut(s) 566, 1013, 1074, 1080, 1133
BslI CCNNNNNNNGG 4 cut(s) 544, 834, 1039, 1120
BsmAI GTCTC 3 cut(s) 846, 862, 960
BsmBI CGTCTC 2 cut(s) 846, 862
BsmFI GGGAC 5 cut(s) 566, 1013, 1074, 1080, 1133
BsnI GGCC 8 cut(s) 434, 472, 501, 548, 566, 625, 1044, 1130
Bsp119I TTCGAA 1 cut(s) 658
Bsp1286I GDGCHC 3 cut(s) 760, 888, 961
Bsp143I GATC 1 cut(s) 1254
BspACI CCGC 3 cut(s) 294, 301, 1226
BspANI GGCC 8 cut(s) 434, 472, 501, 548, 566, 625, 1044, 1130
BspCNI CTCAG 2 cut(s) 842, 1289
BspDI ATCGAT 1 cut(s) 510
BspFNI CGCG 1 cut(s) 303
BspHI TCATGA 1 cut(s) 748
BspLI GGNNCC 3 cut(s) 759, 839, 1099
BspMI ACCTGC 1 cut(s) 1300
BspOI GCTAGC 1 cut(s) 1113
BspPI GGATC 1 cut(s) 1249
BspT104I TTCGAA 1 cut(s) 658
BspT107I GGYRCC 1 cut(s) 757
BsrDI GCAATG 1 cut(s) 1175
BsrFI RCCGGY 3 cut(s) 621, 950, 1339
BsrI ACTGG 3 cut(s) 657, 710, 1092
BssAI RCCGGY 3 cut(s) 621, 950, 1339
BssMI GATC 1 cut(s) 1254
BssNI GRCGYC 1 cut(s) 855
BssSI CACGAG 1 cut(s) 1055
Bst2BI CACGAG 1 cut(s) 1055
Bst4CI ACNGT 5 cut(s) 223, 524, 647, 782, 1216
Bst6I CTCTTC 3 cut(s) 264, 590, 1292
BstACI GRCGYC 1 cut(s) 855
BstAPI GCANNNNNTGC 1 cut(s) 1327
BstBI TTCGAA 1 cut(s) 658
BstC8I GCNNGC 1 cut(s) 1111
BstDEI CTNAG 3 cut(s) 829, 1276, 1388
BstEII GGTNACC 1 cut(s) 21
BstENI CCTNNNNNAGG 1 cut(s) 1037
BstF5I GGATG 2 cut(s) 297, 351
BstFNI CGCG 1 cut(s) 303
BstKTI GATC 1 cut(s) 1257
BstMAI GTCTC 3 cut(s) 846, 862, 960
BstMBI GATC 1 cut(s) 1254
BstMCI CGRYCG 4 cut(s) 622, 649, 781, 1340
BstMWI GCNNNNNNNGC 8 cut(s) 255, 258, 293, 947, 956, 1136, 1327, 1393
BstPI GGTNACC 1 cut(s) 21
BstSFI CTRYAG 1 cut(s) 370
BstSLI GKGCMC 1 cut(s) 760
BstUI CGCG 1 cut(s) 303
BstV1I GCAGC 3 cut(s) 17, 261, 270
Bsu15I ATCGAT 1 cut(s) 510
BsuRI GGCC 8 cut(s) 434, 472, 501, 548, 566, 625, 1044, 1130
BsuTUI ATCGAT 1 cut(s) 510
BtgZI GCGATG 1 cut(s) 885
BtsCI GGATG 2 cut(s) 297, 351
BtsI GCAGTG 1 cut(s) 724
BtsIMutI CAGTG 3 cut(s) 219, 724, 1099
BveI ACCTGC 1 cut(s) 1300
Cac8I GCNNGC 1 cut(s) 1111
CciI TCATGA 1 cut(s) 748
Cfr10I RCCGGY 3 cut(s) 621, 950, 1339
Cfr13I GGNCC 7 cut(s) 432, 470, 547, 565, 896, 1042, 1071
ClaI ATCGAT 1 cut(s) 510
CseI GACGC 2 cut(s) 917, 1135
Csp6I GTAC 4 cut(s) 315, 616, 809, 1030
CviAII CATG 6 cut(s) 457, 736, 749, 962, 1025, 1132
CviQI GTAC 4 cut(s) 315, 616, 809, 1030
DdeI CTNAG 3 cut(s) 829, 1276, 1388
DpnI GATC 1 cut(s) 1256
DpnII GATC 1 cut(s) 1254
Eam1104I CTCTTC 3 cut(s) 264, 590, 1292
EarI CTCTTC 3 cut(s) 264, 590, 1292
Eco47I GGWCC 2 cut(s) 896, 1071
Eco91I GGTNACC 1 cut(s) 21
EcoNI CCTNNNNNAGG 1 cut(s) 1037
EcoO65I GGTNACC 1 cut(s) 21
EcoRI GAATTC 1 cut(s) 14
Esp3I CGTCTC 2 cut(s) 846, 862
FaeI CATG 6 cut(s) 460, 739, 752, 965, 1028, 1135
FaqI GGGAC 5 cut(s) 566, 1013, 1074, 1080, 1133
FatI CATG 6 cut(s) 456, 735, 748, 961, 1024, 1131
FauI CCCGC 1 cut(s) 1233
FauNDI CATATG 1 cut(s) 1365
FblI GTMKAC 1 cut(s) 649
Fnu4HI GCNGC 4 cut(s) 6, 250, 259, 294
FokI GGATG 2 cut(s) 284, 338
Fsp4HI GCNGC 4 cut(s) 6, 250, 259, 294
FspBI CTAG 3 cut(s) 938, 1110, 1116
GluI GCNGC 4 cut(s) 6, 250, 259, 294
HaeIII GGCC 8 cut(s) 434, 472, 501, 548, 566, 625, 1044, 1130
HapII CCGG 8 cut(s) 19, 622, 761, 866, 881, 951, 1241, 1340
HgaI GACGC 2 cut(s) 917, 1135
Hin1I GRCGYC 1 cut(s) 855
Hin1II CATG 6 cut(s) 460, 739, 752, 965, 1028, 1135
HincII GTYRAC 1 cut(s) 650
HindII GTYRAC 1 cut(s) 650
HinfI GANTC 4 cut(s) 187, 397, 420, 660
HpaII CCGG 8 cut(s) 19, 622, 761, 866, 881, 951, 1241, 1340
HphI GGTGA 6 cut(s) 15, 97, 383, 424, 658, 1315
Hpy166II GTNNAC 2 cut(s) 650, 1212
Hpy188I TCNGA 7 cut(s) 152, 186, 334, 832, 1102, 1165, 1279
Hpy188III TCNNGA 6 cut(s) 424, 557, 749, 1196, 1258, 1285
Hpy8I GTNNAC 2 cut(s) 650, 1212
Hpy99I CGWCG 2 cut(s) 563, 779
HpyCH4III ACNGT 5 cut(s) 223, 524, 647, 782, 1216
HpyCH4IV ACGT 1 cut(s) 855
HpyCH4V TGCA 6 cut(s) 194, 227, 816, 1139, 1294, 1309
HpyF10VI GCNNNNNNNGC 8 cut(s) 255, 258, 293, 947, 956, 1136, 1327, 1393
HpyF3I CTNAG 3 cut(s) 829, 1276, 1388
HpySE526I ACGT 1 cut(s) 855
Hsp92I GRCGYC 1 cut(s) 855
Hsp92II CATG 6 cut(s) 460, 739, 752, 965, 1028, 1135
Kzo9I GATC 1 cut(s) 1254
LmnI GCTCC 5 cut(s) 714, 722, 883, 909, 1103
Lsp1109I GCAGC 3 cut(s) 17, 261, 270
LweI GCATC 1 cut(s) 1296
MaeI CTAG 3 cut(s) 938, 1110, 1116
MaeII ACGT 1 cut(s) 855
MaeIII GTNAC 5 cut(s) 21, 398, 664, 782, 861
MalI GATC 1 cut(s) 1256
MboI GATC 1 cut(s) 1254
MboII GAAGA 5 cut(s) 117, 281, 607, 937, 1309
MhlI GDGCHC 3 cut(s) 760, 888, 961
MluCI AATT 8 cut(s) 14, 95, 345, 765, 796, 817, 1048, 1414
MlyI GAGTC 1 cut(s) 406
MroXI GAANNNNTTC 2 cut(s) 309, 419
MseI TTAA 2 cut(s) 113, 1248
MslI CAYNNNNRTG 2 cut(s) 407, 680
MspI CCGG 8 cut(s) 19, 622, 761, 866, 881, 951, 1241, 1340
MvnI CGCG 1 cut(s) 303
MwoI GCNNNNNNNGC 8 cut(s) 255, 258, 293, 947, 956, 1136, 1327, 1393
NdeI CATATG 1 cut(s) 1365
NdeII GATC 1 cut(s) 1254
NheI GCTAGC 1 cut(s) 1109
NlaIII CATG 6 cut(s) 460, 739, 752, 965, 1028, 1135
NlaIV GGNNCC 3 cut(s) 759, 839, 1099
NmuCI GTSAC 4 cut(s) 21, 398, 664, 782
NspV TTCGAA 1 cut(s) 658
PagI TCATGA 1 cut(s) 748
PcsI WCGNNNNNNNCGW 1 cut(s) 655
PdmI GAANNNNTTC 2 cut(s) 309, 419
PfeI GAWTC 3 cut(s) 187, 420, 660
PkrI GCNGC 4 cut(s) 7, 251, 260, 295
PleI GAGTC 1 cut(s) 405
PpsI GAGTC 1 cut(s) 405
PsiI TTATAA 1 cut(s) 803
PspEI GGTNACC 1 cut(s) 21
PspN4I GGNNCC 3 cut(s) 759, 839, 1099
PspPI GGNCC 7 cut(s) 432, 470, 547, 565, 896, 1042, 1071
RsaI GTAC 4 cut(s) 316, 617, 810, 1031
RsaNI GTAC 4 cut(s) 315, 616, 809, 1030
RseI CAYNNNNRTG 2 cut(s) 407, 680
SalI GTCGAC 1 cut(s) 648
SaqAI TTAA 2 cut(s) 113, 1248
SatI GCNGC 4 cut(s) 6, 250, 259, 294
Sau3AI GATC 1 cut(s) 1254
Sau96I GGNCC 7 cut(s) 432, 470, 547, 565, 896, 1042, 1071
ScaI AGTACT 1 cut(s) 810
SchI GAGTC 1 cut(s) 406
SduI GDGCHC 3 cut(s) 760, 888, 961
SetI ASST 7 cut(s) 519, 607, 727, 830, 858, 1035, 1314
SfaNI GCATC 1 cut(s) 1296
SfcI CTRYAG 1 cut(s) 370
SfuI TTCGAA 1 cut(s) 658
SgrAI CRCCGGYG 1 cut(s) 950
SinI GGWCC 2 cut(s) 896, 1071
SmiMI CAYNNNNRTG 2 cut(s) 407, 680
Sse9I AATT 8 cut(s) 14, 95, 345, 765, 796, 817, 1048, 1414
SsiI CCGC 3 cut(s) 294, 301, 1226
SspMI CTAG 3 cut(s) 938, 1110, 1116
TaaI ACNGT 5 cut(s) 223, 524, 647, 782, 1216
TaiI ACGT 1 cut(s) 858
TaqI TCGA 4 cut(s) 495, 510, 649, 658
TasI AATT 8 cut(s) 14, 95, 345, 765, 796, 817, 1048, 1414
TatI WGTACW 1 cut(s) 808
TauI GCSGC 1 cut(s) 296
TfiI GAWTC 3 cut(s) 187, 420, 660
Tru1I TTAA 2 cut(s) 113, 1248
Tru9I TTAA 2 cut(s) 113, 1248
TscAI CASTG 3 cut(s) 226, 724, 1099
TseFI GTSAC 4 cut(s) 21, 398, 664, 782
TseI GCWGC 3 cut(s) 5, 249, 258
Tsp45I GTSAC 4 cut(s) 21, 398, 664, 782
TspDTI ATGAA 5 cut(s) 496, 724, 1026, 1164, 1352
TspGWI ACGGA 1 cut(s) 1084
TspRI CASTG 3 cut(s) 226, 724, 1099
VpaK11BI GGWCC 2 cut(s) 896, 1071
XagI CCTNNNNNAGG 1 cut(s) 1037
XapI RAATTY 3 cut(s) 14, 345, 796
XmiI GTMKAC 1 cut(s) 649
XmnI GAANNNNTTC 2 cut(s) 309, 419
XspI CTAG 3 cut(s) 938, 1110, 1116
ZraI GACGTC 1 cut(s) 856
ZrmI AGTACT 1 cut(s) 810
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.