RchiOBHm_Chr2g0087521

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
2215827 .. 2217431
1605 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46297

Sequence Viewer

Length: 1221 bp
ATGGATCGAAGGAGTACGTGTAGCGTTAATGGTACCAAAGACAAGACTAGTTTGGAGAGAATTGAAGGTGGTTTAGCTGAAGCTCGAGCTTCAATTCTCGATGCAATTCGGTTTGAAGACTATACATCAGAGAAAGAAGAGACTTTTATCCCAAGAGGAAGCATTTACAAAAACCCTTATCCATTTCACCAGAGCCACATAGAGATGATGAAGAGGTTTAAGATGTGGAGCTACAAGGAAGGAGAACATCCCTTAGTGCATTTGGGTCCGATGAATAGGATATATGGCATTGAAGGACAATTCATAGATGAAATAGTGAGGGAGGAGAGCTCATTCAGGGCTACACATCCTGATGAGGCACACATTTTTTTCCTTCCCTTTAGTGTAGCCAACATTGTGCACTATGTGTACCGGCCTGTCATCCGAAAAGAGAACTACCTCCGTGATAGCCTACAACGGATTGCCATGGACTACATAGGTGTTGTGGCACATAAGTACCCCTACTGGAATAGAAGCAATGGTGCTGACCATTTTATGGCTTCATGTCATGACTGGGGACCGCAGATTTCACTTGGTCAATCGGAGCTCTTGAAGGACTTCATTAGAGTACTTTGCAATGCCAACACCTCAGAAGGGTTTGAACCTAAAAGAGACGTTTCATTACCTGAAGTTTTTGTACCTTCTGGAAAGCTAGGCCCGCCCAATTTTGGTCAAGCCCCACACAATCGCCGGATTCTGGCCTTCTCGGCCGGAGGTGTTCATGGACCGATTCGACCCATCTTGCTCCATCATTGGAAGGACAAAGATAACGAAGTTCAAGTCCACGAGACGCCTCCCGGAGGCATGAACTACACGGCATTAATGGGACAGAGCAAGTTCTGCTTGTGCCCTAGAGGTTTTGAAGTGGCAAGTCTAAGAGTAGTGGAGGCAATTTATGCAGGGTGTGTTCCAGTGATAATTTCTGACCACTACACACTACCCTTTAGCGATGTCCTCAATTGGAGCCAATTTTCAGTACAAATTACCGTCGCAAAAATACCAGAAATCAAGACCATCTTACAAGCGATTCCAGATGAGGAGTACCGAAAGATGCAGAGAAGGGTTTTAAAAGTTCAGAGGCATTTTGTACTCAACAGGCCGGCTAAGCCGTTTGATGTGATTCACATGGTACTTCACTCGGTGTGGCTGAGACGAATTGACTTTAAGATTGGCTCTACTTGA

Protein Analysis

406

Amino Acids

46.66

Weight (kDa)

8.6

Isoelectric Point (pI)

50.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 55 - 356 4.2e-60 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 32
AccB1I GGYRCC 1 cut(s) 32
AccB7I CCANNNNNTGG 1 cut(s) 535
AciI CCGC 2 cut(s) 560, 698
AclWI GGATC 1 cut(s) 12
AcoI YGGCCR 1 cut(s) 747
AcuI CTGAAG 2 cut(s) 99, 687
AcyI GRCGYC 1 cut(s) 830
AdeI CACNNNGTG 2 cut(s) 406, 1180
AfiI CCNNNNNNNGG 5 cut(s) 535, 633, 707, 736, 839
AflIII ACRYGT 1 cut(s) 17
AgsI TTSAA 8 cut(s) 65, 93, 116, 293, 592, 641, 818, 902
AhlI ACTAGT 1 cut(s) 47
AluBI AGCT 7 cut(s) 77, 83, 89, 231, 330, 586, 691
AluI AGCT 7 cut(s) 77, 83, 89, 231, 330, 586, 691
Alw21I GWGCWC 3 cut(s) 332, 402, 588
Alw26I GTCTC 4 cut(s) 134, 645, 821, 1183
Alw44I GTGCAC 1 cut(s) 398
AlwI GGATC 1 cut(s) 12
Ama87I CYCGRG 1 cut(s) 84
AoxI GGCC 5 cut(s) 413, 694, 738, 747, 1136
ApaLI GTGCAC 1 cut(s) 398
ArsI GACNNNNNNTTYG 2 cut(s) 804, 836
AseI ATTAAT 1 cut(s) 860
Asp700I GAANNNNTTC 1 cut(s) 596
Asp718I GGTACC 1 cut(s) 32
AspS9I GGNCC 4 cut(s) 266, 557, 695, 764
AsuC2I CCSGG 1 cut(s) 837
AsuHPI GGTGA 1 cut(s) 179
AvaI CYCGRG 1 cut(s) 84
AvaII GGWCC 3 cut(s) 266, 557, 764
BaeGI GKGCMC 2 cut(s) 402, 890
BaeI ACNNNNGTAYC 2 cut(s) 479, 512
BanI GGYRCC 1 cut(s) 32
BanII GRGCYC 2 cut(s) 332, 588
BarI GAAGNNNNNNTAC 2 cut(s) 660, 692
BauI CACGAG 1 cut(s) 824
BbsI GAAGAC 1 cut(s) 123
Bbv12I GWGCWC 3 cut(s) 332, 402, 588
BccI CCATC 3 cut(s) 785, 795, 1061
BceAI ACGGC 2 cut(s) 870, 1132
BcnI CCSGG 1 cut(s) 837
BcoDI GTCTC 4 cut(s) 134, 645, 821, 1183
BcuI ACTAGT 1 cut(s) 47
BfaI CTAG 3 cut(s) 48, 692, 891
BglI GCCNNNNNGGC 1 cut(s) 746
BlpI GCTNAGC 1 cut(s) 1143
BmcAI AGTACT 1 cut(s) 609
Bme1390I CCNGG 1 cut(s) 837
Bme18I GGWCC 3 cut(s) 266, 557, 764
BmeT110I CYCGRG 1 cut(s) 84
BmgT120I GGNCC 4 cut(s) 266, 557, 695, 764
BmiI GGNNCC 4 cut(s) 34, 267, 558, 1004
BmrFI CCNGG 1 cut(s) 837
BmrI ACTGGG 1 cut(s) 562
BmsI GCATC 2 cut(s) 91, 1080
BmuI ACTGGG 1 cut(s) 562
BpiI GAAGAC 1 cut(s) 123
BplI GAGNNNNNCTC 2 cut(s) 314, 346
Bpu1102I GCTNAGC 1 cut(s) 1143
BpuMI CCSGG 1 cut(s) 837
BsaAI YACGTR 1 cut(s) 18
BsaHI GRCGYC 1 cut(s) 830
BsaJI CCNNGG 1 cut(s) 465
BsaXI ACNNNNNCTCC 1 cut(s) 34
Bsc4I CCNNNNNNNGG 5 cut(s) 535, 633, 707, 736, 839
Bse118I RCCGGY 2 cut(s) 411, 1138
Bse1I ACTGG 3 cut(s) 509, 557, 950
Bse3DI GCAATG 2 cut(s) 523, 622
BseDI CCNNGG 1 cut(s) 465
BseGI GGATG 3 cut(s) 247, 346, 420
BseLI CCNNNNNNNGG 5 cut(s) 535, 633, 707, 736, 839
BseMI GCAATG 2 cut(s) 523, 622
BseMII CTCAG 2 cut(s) 642, 1178
BseNI ACTGG 3 cut(s) 509, 557, 950
BseRI GAGGAG 2 cut(s) 338, 1091
BseSI GKGCMC 2 cut(s) 402, 890
BseX3I CGGCCG 1 cut(s) 747
Bsh1285I CGRYCG 1 cut(s) 750
BshFI GGCC 5 cut(s) 415, 696, 740, 749, 1138
BshNI GGYRCC 1 cut(s) 32
BsiEI CGRYCG 1 cut(s) 750
BsiHKAI GWGCWC 3 cut(s) 332, 402, 588
BsiHKCI CYCGRG 1 cut(s) 84
BsiSI CCGG 5 cut(s) 412, 730, 750, 837, 1139
BslFI GGGAC 2 cut(s) 570, 879
BslI CCNNNNNNNGG 5 cut(s) 535, 633, 707, 736, 839
BsmAI GTCTC 4 cut(s) 134, 645, 821, 1183
BsmBI CGTCTC 3 cut(s) 645, 821, 1183
BsmFI GGGAC 2 cut(s) 570, 879
BsnI GGCC 5 cut(s) 415, 696, 740, 749, 1138
BsoBI CYCGRG 1 cut(s) 84
Bsp1286I GDGCHC 4 cut(s) 332, 402, 588, 890
Bsp143I GATC 1 cut(s) 4
Bsp1720I GCTNAGC 1 cut(s) 1143
Bsp19I CCATGG 1 cut(s) 465
BspACI CCGC 2 cut(s) 560, 698
BspANI GGCC 5 cut(s) 415, 696, 740, 749, 1138
BspCNI CTCAG 2 cut(s) 641, 1179
BspHI TCATGA 1 cut(s) 547
BspLI GGNNCC 4 cut(s) 34, 267, 558, 1004
BspPI GGATC 1 cut(s) 12
BspT107I GGYRCC 1 cut(s) 32
BsrDI GCAATG 2 cut(s) 523, 622
BsrFI RCCGGY 2 cut(s) 411, 1138
BsrI ACTGG 3 cut(s) 509, 557, 950
BssAI RCCGGY 2 cut(s) 411, 1138
BssECI CCNNGG 1 cut(s) 465
BssMI GATC 1 cut(s) 4
BssNI GRCGYC 1 cut(s) 830
BssSI CACGAG 1 cut(s) 824
BssT1I CCWWGG 1 cut(s) 465
Bst2BI CACGAG 1 cut(s) 824
Bst4CI ACNGT 1 cut(s) 1027
Bst6I CTCTTC 2 cut(s) 132, 206
BstACI GRCGYC 1 cut(s) 830
BstAPI GCANNNNNTGC 2 cut(s) 879, 935
BstBAI YACGTR 1 cut(s) 18
BstC8I GCNNGC 2 cut(s) 698, 1140
BstDEI CTNAG 5 cut(s) 253, 628, 914, 1143, 1187
BstDSI CCRYGG 1 cut(s) 465
BstENI CCTNNNNNAGG 1 cut(s) 837
BstF5I GGATG 3 cut(s) 247, 346, 420
BstKTI GATC 1 cut(s) 7
BstMAI GTCTC 4 cut(s) 134, 645, 821, 1183
BstMBI GATC 1 cut(s) 4
BstMCI CGRYCG 1 cut(s) 750
BstMWI GCNNNNNNNGC 5 cut(s) 697, 746, 879, 935, 1144
BstSCI CCNGG 1 cut(s) 835
BstSLI GKGCMC 2 cut(s) 402, 890
BstV2I GAAGAC 1 cut(s) 123
BstZI CGGCCG 1 cut(s) 747
BsuRI GGCC 5 cut(s) 415, 696, 740, 749, 1138
BtgI CCRYGG 1 cut(s) 465
BtgZI GCGATG 1 cut(s) 1002
BtsCI GGATG 3 cut(s) 247, 346, 420
BtsIMutI CAGTG 1 cut(s) 957
Cac8I GCNNGC 2 cut(s) 698, 1140
CciI TCATGA 1 cut(s) 547
Cfr10I RCCGGY 2 cut(s) 411, 1138
Cfr13I GGNCC 4 cut(s) 266, 557, 695, 764
CseI GACGC 1 cut(s) 838
CviAII CATG 6 cut(s) 466, 543, 548, 761, 844, 1165
DdeI CTNAG 5 cut(s) 253, 628, 914, 1143, 1187
DpnI GATC 1 cut(s) 6
DpnII GATC 1 cut(s) 4
DraI TTTAAA 1 cut(s) 1107
DraIII CACNNNGTG 2 cut(s) 406, 1180
EaeI YGGCCR 1 cut(s) 747
EagI CGGCCG 1 cut(s) 747
Eam1104I CTCTTC 2 cut(s) 132, 206
EarI CTCTTC 2 cut(s) 132, 206
Ecl136II GAGCTC 2 cut(s) 330, 586
EclXI CGGCCG 1 cut(s) 747
Eco130I CCWWGG 1 cut(s) 465
Eco24I GRGCYC 2 cut(s) 332, 588
Eco47I GGWCC 3 cut(s) 266, 557, 764
Eco52I CGGCCG 1 cut(s) 747
Eco53kI GAGCTC 2 cut(s) 330, 586
Eco57I CTGAAG 2 cut(s) 99, 687
Eco88I CYCGRG 1 cut(s) 84
EcoICRI GAGCTC 2 cut(s) 330, 586
EcoNI CCTNNNNNAGG 1 cut(s) 837
EcoT14I CCWWGG 1 cut(s) 465
EcoT38I GRGCYC 2 cut(s) 332, 588
ErhI CCWWGG 1 cut(s) 465
Esp3I CGTCTC 3 cut(s) 645, 821, 1183
FaeI CATG 6 cut(s) 469, 546, 551, 764, 847, 1168
FalI AAGNNNNNCTT 4 cut(s) 866, 898, 1040, 1072
FaqI GGGAC 2 cut(s) 570, 879
FatI CATG 6 cut(s) 465, 542, 547, 760, 843, 1164
FauI CCCGC 1 cut(s) 705
FokI GGATG 3 cut(s) 234, 333, 407
FriOI GRGCYC 2 cut(s) 332, 588
FspBI CTAG 3 cut(s) 48, 692, 891
HaeIII GGCC 5 cut(s) 415, 696, 740, 749, 1138
HapII CCGG 5 cut(s) 412, 730, 750, 837, 1139
HgaI GACGC 1 cut(s) 838
Hin1I GRCGYC 1 cut(s) 830
Hin1II CATG 6 cut(s) 469, 546, 551, 764, 847, 1168
HinfI GANTC 4 cut(s) 733, 769, 1066, 1159
HpaII CCGG 5 cut(s) 412, 730, 750, 837, 1139
HphI GGTGA 1 cut(s) 179
Hpy166II GTNNAC 3 cut(s) 400, 409, 823
Hpy188I TCNGA 7 cut(s) 130, 270, 425, 583, 631, 964, 1116
Hpy188III TCNNGA 7 cut(s) 98, 350, 548, 589, 684, 1048, 1070
Hpy8I GTNNAC 3 cut(s) 400, 409, 823
Hpy99I CGWCG 1 cut(s) 1031
HpyCH4III ACNGT 1 cut(s) 1027
HpyCH4IV ACGT 2 cut(s) 17, 654
HpyCH4V TGCA 6 cut(s) 104, 259, 400, 615, 938, 1093
HpyF10VI GCNNNNNNNGC 5 cut(s) 697, 746, 879, 935, 1144
HpyF3I CTNAG 5 cut(s) 253, 628, 914, 1143, 1187
HpySE526I ACGT 2 cut(s) 17, 654
Hsp92I GRCGYC 1 cut(s) 830
Hsp92II CATG 6 cut(s) 469, 546, 551, 764, 847, 1168
KpnI GGTACC 1 cut(s) 36
KroI GCCGGC 1 cut(s) 1138
KroNI GCCGGC 1 cut(s) 1140
Kzo9I GATC 1 cut(s) 4
LmnI GCTCC 4 cut(s) 228, 583, 789, 1002
LweI GCATC 2 cut(s) 91, 1080
MaeI CTAG 3 cut(s) 48, 692, 891
MaeII ACGT 2 cut(s) 17, 654
MalI GATC 1 cut(s) 6
MboI GATC 1 cut(s) 4
MboII GAAGA 3 cut(s) 128, 149, 223
MfeI CAATTG 1 cut(s) 997
MhlI GDGCHC 4 cut(s) 332, 402, 588, 890
MroNI GCCGGC 1 cut(s) 1138
MroXI GAANNNNTTC 1 cut(s) 596
MseI TTAA 5 cut(s) 27, 219, 860, 1106, 1203
MslI CAYNNNNRTG 2 cut(s) 203, 351
MspI CCGG 5 cut(s) 412, 730, 750, 837, 1139
MspR9I CCNGG 1 cut(s) 837
MunI CAATTG 1 cut(s) 997
MwoI GCNNNNNNNGC 5 cut(s) 697, 746, 879, 935, 1144
NaeI GCCGGC 1 cut(s) 1140
NciI CCSGG 1 cut(s) 837
NcoI CCATGG 1 cut(s) 465
NdeII GATC 1 cut(s) 4
NgoMIV GCCGGC 1 cut(s) 1138
NlaIII CATG 6 cut(s) 469, 546, 551, 764, 847, 1168
NlaIV GGNNCC 4 cut(s) 34, 267, 558, 1004
NmeAIII GCCGAG 1 cut(s) 725
PaeR7I CTCGAG 1 cut(s) 84
PagI TCATGA 1 cut(s) 547
PdiI GCCGGC 1 cut(s) 1140
PdmI GAANNNNTTC 1 cut(s) 596
PfeI GAWTC 4 cut(s) 733, 769, 1066, 1159
PflMI CCANNNNNTGG 1 cut(s) 535
PfoI TCCNGGA 1 cut(s) 835
Ppu21I YACGTR 1 cut(s) 18
PshBI ATTAAT 1 cut(s) 860
Psp124BI GAGCTC 2 cut(s) 332, 588
PspN4I GGNNCC 4 cut(s) 34, 267, 558, 1004
PspPI GGNCC 4 cut(s) 266, 557, 695, 764
PspXI VCTCGAGB 1 cut(s) 84
RseI CAYNNNNRTG 2 cut(s) 203, 351
SacI GAGCTC 2 cut(s) 332, 588
SaqAI TTAA 5 cut(s) 27, 219, 860, 1106, 1203
Sau3AI GATC 1 cut(s) 4
Sau96I GGNCC 4 cut(s) 266, 557, 695, 764
ScaI AGTACT 1 cut(s) 609
ScrFI CCNGG 1 cut(s) 837
SduI GDGCHC 4 cut(s) 332, 402, 588, 890
SfaNI GCATC 2 cut(s) 91, 1080
SfiI GGCCNNNNNGGCC 1 cut(s) 746
Sfr274I CTCGAG 1 cut(s) 84
SinI GGWCC 3 cut(s) 266, 557, 764
SlaI CTCGAG 1 cut(s) 84
SmiMI CAYNNNNRTG 2 cut(s) 203, 351
SmlI CTYRAG 1 cut(s) 84
SmoI CTYRAG 1 cut(s) 84
SpeI ACTAGT 1 cut(s) 47
SsiI CCGC 2 cut(s) 560, 698
SspMI CTAG 3 cut(s) 48, 692, 891
SstI GAGCTC 2 cut(s) 332, 588
StyD4I CCNGG 1 cut(s) 835
StyI CCWWGG 1 cut(s) 465
TaaI ACNGT 1 cut(s) 1027
TaiI ACGT 2 cut(s) 20, 657
TaqI TCGA 4 cut(s) 7, 85, 99, 772
TaqII GACCGA 1 cut(s) 781
TatI WGTACW 3 cut(s) 607, 1015, 1126
TfiI GAWTC 4 cut(s) 733, 769, 1066, 1159
Tru1I TTAA 5 cut(s) 27, 219, 860, 1106, 1203
Tru9I TTAA 5 cut(s) 27, 219, 860, 1106, 1203
TscAI CASTG 1 cut(s) 957
TspDTI ATGAA 9 cut(s) 224, 287, 292, 324, 531, 589, 648, 749, 860
TspGWI ACGGA 2 cut(s) 431, 472
TspRI CASTG 1 cut(s) 957
Van91I CCANNNNNTGG 1 cut(s) 535
VneI GTGCAC 1 cut(s) 398
VpaK11BI GGWCC 3 cut(s) 266, 557, 764
VspI ATTAAT 1 cut(s) 860
XagI CCTNNNNNAGG 1 cut(s) 837
XhoI CTCGAG 1 cut(s) 84
XmnI GAANNNNTTC 1 cut(s) 596
XspI CTAG 3 cut(s) 48, 692, 891
ZrmI AGTACT 1 cut(s) 609
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.