Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0000987

Physical Location & Seq

Genomic Coordinates Forward (+)

1954779 .. 1959603

Gene Structure 4825 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG029700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGGATCGAAGGAGTAGGTGTGACGTTAATGGTACCAAAGACAAGACTAGTTTGGAGAGAATTGAAGAAGGTTTAGCTGAAGCTCGAGCTTCAATTCTCGATGCAATTCGGTTTGAAAACTATACATCAGAGAAAGAAGAGACTTTTATCCCAAGAGGAAGCATTTCCAAAAACCCTTATGCATTTCACCAGAGCCACATAGAGATGATGAAGAGGTTTAAGATGTGGAGCTACAAGGAAGGAGAACATCCCTTAGTGCATTTGGGTCCGATGAATAGGATATATGGCATTGAAGGACAATTCATAGATGAAATAGTGAGGGAGGAGAGCCCATTCAGGGCTACACATCCTGATGAGGCACACATTTTTTCCCTTCCCTTTAGTGTAGCCAACATTCTGCACCAAGTGTACCGGCCTGTCATCCGAAAAGAGAACTACCTCCGTGATCGCCTACAACGGATTGCCATGGACTACATAGGTGTTGTGGCACATAAGTACCCCTACTGGAATAGAAGCAATGGTGCTGACCATTTTATGGCTTCATGTCATGACTGGGGACCGCAGATTTCACTAGGTCAATCGGAACTCCTGAAGAACTTCATTAGAGTACTTTGCAATGCCAACACCTCAGAAGGGTTTGAACCTAAAAGAGACGTTTCACTACCTGAAGTTTTTGTACCTTCTGGAAAGCTTAGCCGGCCCAATTTTGGTCAAGCCCCACACAATCGCCGGATTCTGGCCTTCTTTGCCGGTGGTGTTCATAGACCGATTCGACCTATCTTGCTCCATCATTGGAAGGACAAAGATAACGAAGTTCAAGTCCACGAGACGCTTCCCGAAGGCATGAACTACACCGCATTAATGGGACAGAGCAAGTTTTGCTTGTGCGCTAGCGGTTTTGAAGTGGCAAGTGCAAGAGTTGTGGAGGCAATTTATGCAGGCGATGTCCTCGACTGGAGCCAATTTTCAATACAAATTACCGTCGCTAAAATACCAGAAATCAAGACCATCTTACAAGCGATTCCAGATGAGGAATACCAAAAGATGCAGAGAAGGGTTTTAAAAGTTCAGAGGCATTTTGTACTCAACAGGCCGGCTAAGCCATTTGATGTGATTCACATGGAGAAGACTAGTTTGGAGAGAATTGAAGAAGATTTAGCTAAAGCACGAGCATCAATTCTCAGGGCAATTCAGTTTAAAAACTACACATCAGAGAAAGTACAGAGTTTTGTCCCAAGAGGAGGCATTTACAAAAACCCTTATGCTTTTCACCAGTTGAGTTTTACGAGTCACCTAGAGATGATGAAGAGGTTCAAGATGTGGAGCTACAAGGAAGGAGAACAACCCTTGGTCCATTTTGGTCCTATGAATGATATATATGGCATTGAAGGACACTTCATAGATGAAATAGAAAGGGAGGGGAGCCCATTTAGGGCTACAGATCCTGATGAGGCACACATGTTTTTCCTCCCATTTAGTGTAGCTAACATTGTTCACTATGTTTACTTGCCTATCACTAAAAAACAGGACTACCACCGTGATCGTCTACAACAGATTACCTGGGACTACATTGGCGTTGTGGCACATAAGTATCCCTATTGGAATAGGAGCAAAGGTGCCGACCATTTTATGGCTTCATGTCACGATTGGGCACCAGAGATTTCAGCTGGCCAATCGAAGCTTTTCAAAAACTTCATTAGAGTGCTTTGCAATGCCAACACCTCTGAAGGGTTCCAACCTAAGAGAGATGTTCCATTACCTGAAATATTTGTACCTTCTGGAAAGCTCGGTCCCCCCAATTTGGGTCAGGCTCCAAACAATCGTCGAATTCTGGCCTTCTTTGCGGGTAGAGTTCATGGACCGATTCGACCAATCTTGCTCGAGCATTGGAAGGACAAAGATGACGAAATTCAAGTCCACGAGAAGCTTCCCAAGGGCATGAACTACACCGCATTAATGGGACAAAGCAAGTTTTGCTTGTGCCCTAGTGGTTTTGAAGTGGCAAGCCCTAGAGTTGTGGAGGCATTTTATGCAGGGTGTGTTCCGGTGTTAATTTCCGACAACTACACATTACCCTTTAGTGATGTCCTTGATTGGAGCCAATTTTCAATACAAATTCCCGTCGCGAAAATACAAGAAATCAAGACCATCTTACAAGCAATTCCAAATGAGGAATACCTAAAGATGCAGAGGAGGGTTTTAAAAGTTCGGAGGCATTTTGTACTCAACAAGCCGGCTAAGCCATTTGATGTGATTCACATGGTACTTCATTCAGTGTGGTTGAGACGACTTAATTTTAAGCTTGGAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009987 GO:0010393 GO:0010398 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016763 GO:0017144 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0035252 GO:0042285 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045488 GO:0045489 GO:0071704 GO:0097708 GO:0098588 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exostosin

Protein Analysis

770

Amino Acids

89.05

Weight (kDa)

8.96

Isoelectric Point (pI)

51.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exostosin_GT47	PF03016	66 - 341	5.5e-39	Exostosin GT47 domain
Exostosin_GT47	PF03016	434 - 721	8.2e-61	Exostosin GT47 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000987)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G42180 AT3G42180
fragaria_vesca	FvH4_1g02510 FvH4_1g02510 FvH4_1g02511 FvH4_1g02520 FvH4_1g02520 FvH4_6g00700 FvH4_6g00700 FvH4_6g00700
malus_domestica	MD02G1022600.v1.1 MD04G1242600.v1.1 MD04G1243200.v1.1 MD04G1243300.v1.1 MD04G1243400.v1.1 MD15G1165200.v1.1 MD15G1165300.v1.1
prunus_persica	Prupe.6G359500_v2.0.a1 Prupe.6G359600_v2.0.a1 Prupe.6G359600_v2.0.a1 Prupe.7G249500_v2.0.a1 Prupe.7G249600_v2.0.a1 Prupe.7G249600_v2.0.a1
pyrus_communis	pycom04g21420
rosa_chinensis	RchiOBHm_Chr2g0087521 RchiOBHm_Chr2g0087541 RchiOBHm_Chr2g0087551 RchiOBHm_Chr3g0448141 RchiOBHm_Chr3g0448161
rosa_laevigata	RLG00000015875 RLG00000015876 RLG00000015877 RLG00000025942 RLG00000025943
rosa_multiflora	Rmu_sc0002299.1_g000012 Rmu_sc0002299.1_g000014 Rmu_sc0002299.1_g000020 Rmu_sc0005969.1_g000031
rosa_roxburghii	Rroxscaffold_2G00153480 Rroxscaffold_6G00426270 Rroxscaffold_6G00426300
rosa_rugosa	Rorug01G0476400 Rorug01G0476400 Rorug01G0476400 Rorug02G0608400 Rorug02G0608400 Rorug02G0608500
rosa_samantha	Rh2AG029600 Rh2AG029700 Rh2AG029800 Rh2BG029700 Rh2BG029800 Rh3BG007800 Rh3BG007900 Rh3CG007800 Rh3CG008000 Rh3DG008200
rosa_wichuraiana	Rw2G002350 Rw2G002360 Rw2G002370 Rw3G000650 Rw3G000660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	32
AccB1I	GGYRCC	3 cut(s)	32, 1616, 1651
AccB7I	CCANNNNNTGG	2 cut(s)	535, 1630
AccI	GTMKAC	1 cut(s)	1546
AccII	CGCG	1 cut(s)	2126
AciI	CCGC	5 cut(s)	560, 855, 894, 1844, 1950
AclWI	GGATC	2 cut(s)	12, 1436
AcoI	YGGCCR	1 cut(s)	1669
AcsI	RAATTY	3 cut(s)	1827, 1908, 2115
AcuI	CTGAAG	4 cut(s)	99, 611, 687, 1746
AdeI	CACNNNGTG	1 cut(s)	406
AflIII	ACRYGT	1 cut(s)	1458
AhlI	ACTAGT	2 cut(s)	47, 1130
AjnI	CCWGG	1 cut(s)	1559
AjuI	GAANNNNNNNTTGG	2 cut(s)	1118, 1150
Alw26I	GTCTC	4 cut(s)	134, 645, 821, 2278
AlwI	GGATC	2 cut(s)	12, 1436
AlwNI	CAGNNNCTG	1 cut(s)	1445
Ama87I	CYCGRG	2 cut(s)	84, 1880
AoxI	GGCC	6 cut(s)	413, 698, 738, 1091, 1669, 1833
ApoI	RAATTY	3 cut(s)	1827, 1908, 2115
ArsI	GACNNNNNNTTYG	4 cut(s)	804, 836, 1899, 1931
AseI	ATTAAT	2 cut(s)	860, 1955
Asp700I	GAANNNNTTC	4 cut(s)	163, 596, 1310, 1682
Asp718I	GGTACC	1 cut(s)	32
AspLEI	GCGC	1 cut(s)	890
AspS9I	GGNCC	7 cut(s)	266, 557, 699, 1351, 1361, 1790, 1859
AsuHPI	GGTGA	3 cut(s)	179, 1262, 1283
AsuNHI	GCTAGC	1 cut(s)	890
AvaI	CYCGRG	2 cut(s)	84, 1880
AvaII	GGWCC	6 cut(s)	266, 557, 1351, 1361, 1790, 1859
BaeGI	GKGCMC	2 cut(s)	1654, 1985
BaeI	ACNNNNGTAYC	4 cut(s)	479, 512, 1574, 1607
BalI	TGGCCA	1 cut(s)	1671
BanI	GGYRCC	3 cut(s)	32, 1616, 1651
BanII	GRGCYC	2 cut(s)	332, 1427
BarI	GAAGNNNNNNTAC	2 cut(s)	660, 692
BauI	CACGAG	3 cut(s)	824, 1167, 1919
BbsI	GAAGAC	1 cut(s)	1133
BccI	CCATC	3 cut(s)	795, 1016, 2156
BciT130I	CCWGG	1 cut(s)	1561
BciVI	GTATCC	1 cut(s)	1602
BcoDI	GTCTC	4 cut(s)	134, 645, 821, 2278
BcuI	ACTAGT	2 cut(s)	47, 1130
BfaI	CTAG	7 cut(s)	48, 572, 891, 1131, 1295, 1986, 2010
BfmI	CTRYAG	1 cut(s)	1437
BfuI	GTATCC	1 cut(s)	1602
BlpI	GCTNAGC	3 cut(s)	692, 1098, 2238
BmcAI	AGTACT	1 cut(s)	609
Bme1390I	CCNGG	1 cut(s)	1561
Bme18I	GGWCC	6 cut(s)	266, 557, 1351, 1361, 1790, 1859
BmeT110I	CYCGRG	2 cut(s)	84, 1880
BmgT120I	GGNCC	7 cut(s)	266, 557, 699, 1351, 1361, 1790, 1859
BmrFI	CCNGG	1 cut(s)	1561
BmrI	ACTGGG	1 cut(s)	562
BmsI	GCATC	4 cut(s)	91, 1035, 1181, 2175
BmtI	GCTAGC	1 cut(s)	894
BmuI	ACTGGG	1 cut(s)	562
BpiI	GAAGAC	1 cut(s)	1133
BpmI	CTGGAG	1 cut(s)	976
Bpu1102I	GCTNAGC	3 cut(s)	692, 1098, 2238
BsaJI	CCNNGG	4 cut(s)	465, 1347, 1560, 1932
BsaWI	WCCGGW	1 cut(s)	2044
BsaXI	ACNNNNNCTCC	3 cut(s)	34, 1600, 1630
Bse118I	RCCGGY	5 cut(s)	411, 696, 749, 1093, 2233
Bse1I	ACTGG	4 cut(s)	509, 557, 959, 1273
Bse3DI	GCAATG	3 cut(s)	523, 622, 1717
BseBI	CCWGG	1 cut(s)	1561
BseDI	CCNNGG	4 cut(s)	465, 1347, 1560, 1932
BseGI	GGATG	3 cut(s)	247, 346, 420
BseMI	GCAATG	3 cut(s)	523, 622, 1717
BseMII	CTCAG	2 cut(s)	642, 1195
BseNI	ACTGG	4 cut(s)	509, 557, 959, 1273
BseRI	GAGGAG	3 cut(s)	338, 1254, 2206
BseSI	GKGCMC	2 cut(s)	1654, 1985
BsgI	GTGCAG	1 cut(s)	383
Bsh1236I	CGCG	1 cut(s)	2126
BshFI	GGCC	6 cut(s)	415, 700, 740, 1093, 1671, 1835
BshNI	GGYRCC	3 cut(s)	32, 1616, 1651
BsiHKCI	CYCGRG	2 cut(s)	84, 1880
BsiSI	CCGG	7 cut(s)	412, 697, 730, 750, 1094, 2045, 2234
BslFI	GGGAC	6 cut(s)	570, 879, 1217, 1577, 1776, 1974
BsmAI	GTCTC	4 cut(s)	134, 645, 821, 2278
BsmBI	CGTCTC	3 cut(s)	645, 821, 2278
BsmFI	GGGAC	6 cut(s)	570, 879, 1217, 1577, 1776, 1974
BsnI	GGCC	6 cut(s)	415, 700, 740, 1093, 1671, 1835
BsoBI	CYCGRG	2 cut(s)	84, 1880
Bsp1286I	GDGCHC	4 cut(s)	332, 1427, 1654, 1985
Bsp143I	GATC	4 cut(s)	4, 445, 1441, 1540
Bsp1720I	GCTNAGC	3 cut(s)	692, 1098, 2238
Bsp19I	CCATGG	1 cut(s)	465
Bsp68I	TCGCGA	1 cut(s)	2126
BspACI	CCGC	5 cut(s)	560, 855, 894, 1844, 1950
BspANI	GGCC	6 cut(s)	415, 700, 740, 1093, 1671, 1835
BspCNI	CTCAG	2 cut(s)	641, 1194
BspFNI	CGCG	1 cut(s)	2126
BspHI	TCATGA	1 cut(s)	547
BspOI	GCTAGC	1 cut(s)	894
BspPI	GGATC	2 cut(s)	12, 1436
BspT107I	GGYRCC	3 cut(s)	32, 1616, 1651
BsrDI	GCAATG	3 cut(s)	523, 622, 1717
BsrFI	RCCGGY	5 cut(s)	411, 696, 749, 1093, 2233
BsrI	ACTGG	4 cut(s)	509, 557, 959, 1273
BssAI	RCCGGY	5 cut(s)	411, 696, 749, 1093, 2233
BssECI	CCNNGG	4 cut(s)	465, 1347, 1560, 1932
BssMI	GATC	4 cut(s)	4, 445, 1441, 1540
BssSI	CACGAG	3 cut(s)	824, 1167, 1919
BssT1I	CCWWGG	3 cut(s)	465, 1347, 1932
Bst2BI	CACGAG	3 cut(s)	824, 1167, 1919
Bst2UI	CCWGG	1 cut(s)	1561
Bst4CI	ACNGT	2 cut(s)	982, 1538
Bst6I	CTCTTC	3 cut(s)	132, 206, 1301
BstAPI	GCANNNNNTGC	4 cut(s)	879, 935, 1974, 2030
BstC8I	GCNNGC	7 cut(s)	698, 892, 940, 1095, 1669, 2005, 2235
BstDEI	CTNAG	7 cut(s)	253, 628, 692, 1098, 1181, 1740, 2238
BstDSI	CCRYGG	1 cut(s)	465
BstF5I	GGATG	3 cut(s)	247, 346, 420
BstFNI	CGCG	1 cut(s)	2126
BstHHI	GCGC	1 cut(s)	890
BstKTI	GATC	4 cut(s)	7, 448, 1444, 1543
BstMAI	GTCTC	4 cut(s)	134, 645, 821, 2278
BstMBI	GATC	4 cut(s)	4, 445, 1441, 1540
BstMWI	GCNNNNNNNGC	9 cut(s)	697, 746, 879, 935, 1099, 1841, 1974, 2030, 2239
BstNI	CCWGG	1 cut(s)	1561
BstNSI	RCATGY	1 cut(s)	1462
BstSCI	CCNGG	1 cut(s)	1559
BstSFI	CTRYAG	1 cut(s)	1437
BstSLI	GKGCMC	2 cut(s)	1654, 1985
BstUI	CGCG	1 cut(s)	2126
BstV2I	GAAGAC	1 cut(s)	1133
BstX2I	RGATCY	1 cut(s)	1441
BstYI	RGATCY	1 cut(s)	1441
BsuI	GTATCC	1 cut(s)	1602
BsuRI	GGCC	6 cut(s)	415, 700, 740, 1093, 1671, 1835
BtgI	CCRYGG	1 cut(s)	465
BtgZI	GCGATG	1 cut(s)	957
BtsCI	GGATG	3 cut(s)	247, 346, 420
BtsIMutI	CAGTG	1 cut(s)	2280
BtuMI	TCGCGA	1 cut(s)	2126
Cac8I	GCNNGC	7 cut(s)	698, 892, 940, 1095, 1669, 2005, 2235
CaiI	CAGNNNCTG	1 cut(s)	1445
CciI	TCATGA	1 cut(s)	547
CfoI	GCGC	1 cut(s)	890
Cfr10I	RCCGGY	5 cut(s)	411, 696, 749, 1093, 2233
Cfr13I	GGNCC	7 cut(s)	266, 557, 699, 1351, 1361, 1790, 1859
CseI	GACGC	1 cut(s)	838
CspCI	CAANNNNNGTGG	2 cut(s)	903, 938
DdeI	CTNAG	7 cut(s)	253, 628, 692, 1098, 1181, 1740, 2238
DpnI	GATC	4 cut(s)	6, 447, 1443, 1542
DpnII	GATC	4 cut(s)	4, 445, 1441, 1540
DraI	TTTAAA	3 cut(s)	1062, 1198, 2202
DraIII	CACNNNGTG	1 cut(s)	406
EaeI	YGGCCR	1 cut(s)	1669
Eam1104I	CTCTTC	3 cut(s)	132, 206, 1301
EarI	CTCTTC	3 cut(s)	132, 206, 1301
Eco130I	CCWWGG	3 cut(s)	465, 1347, 1932
Eco24I	GRGCYC	2 cut(s)	332, 1427
Eco47I	GGWCC	6 cut(s)	266, 557, 1351, 1361, 1790, 1859
Eco57I	CTGAAG	4 cut(s)	99, 611, 687, 1746
Eco88I	CYCGRG	2 cut(s)	84, 1880
EcoRI	GAATTC	1 cut(s)	1827
EcoRII	CCWGG	1 cut(s)	1559
EcoT14I	CCWWGG	3 cut(s)	465, 1347, 1932
EcoT22I	ATGCAT	1 cut(s)	184
EcoT38I	GRGCYC	2 cut(s)	332, 1427
ErhI	CCWWGG	3 cut(s)	465, 1347, 1932
Esp3I	CGTCTC	3 cut(s)	645, 821, 2278
FalI	AAGNNNNNCTT	8 cut(s)	866, 898, 995, 1027, 1961, 1993, 2135, 2167
FaqI	GGGAC	6 cut(s)	570, 879, 1217, 1577, 1776, 1974
FauI	CCCGC	1 cut(s)	1837
FblI	GTMKAC	1 cut(s)	1546
FokI	GGATG	3 cut(s)	234, 333, 407
FriOI	GRGCYC	2 cut(s)	332, 1427
FspBI	CTAG	7 cut(s)	48, 572, 891, 1131, 1295, 1986, 2010
GlaI	GCGC	1 cut(s)	889
GsuI	CTGGAG	1 cut(s)	976
HaeIII	GGCC	6 cut(s)	415, 700, 740, 1093, 1671, 1835
HapII	CCGG	7 cut(s)	412, 697, 730, 750, 1094, 2045, 2234
HgaI	GACGC	1 cut(s)	838
HhaI	GCGC	1 cut(s)	890
Hin6I	GCGC	1 cut(s)	888
HinP1I	GCGC	1 cut(s)	888
HindIII	AAGCTT	4 cut(s)	689, 1679, 1925, 2300
HinfI	GANTC	7 cut(s)	733, 769, 1021, 1114, 1288, 1864, 2254
HpaII	CCGG	7 cut(s)	412, 697, 730, 750, 1094, 2045, 2234
HphI	GGTGA	3 cut(s)	179, 1262, 1283
Hpy166II	GTNNAC	6 cut(s)	409, 823, 1495, 1504, 1547, 1918
Hpy8I	GTNNAC	6 cut(s)	409, 823, 1495, 1504, 1547, 1918
Hpy99I	CGWCG	3 cut(s)	986, 1827, 2126
HpyCH4III	ACNGT	2 cut(s)	982, 1538
HpyCH4IV	ACGT	2 cut(s)	24, 654
HpyF10VI	GCNNNNNNNGC	9 cut(s)	697, 746, 879, 935, 1099, 1841, 1974, 2030, 2239
HpyF3I	CTNAG	7 cut(s)	253, 628, 692, 1098, 1181, 1740, 2238
HpySE526I	ACGT	2 cut(s)	24, 654
HspAI	GCGC	1 cut(s)	888
KpnI	GGTACC	1 cut(s)	36
KroI	GCCGGC	3 cut(s)	696, 1093, 2233
KroNI	GCCGGC	3 cut(s)	698, 1095, 2235
Kzo9I	GATC	4 cut(s)	4, 445, 1441, 1540
LmnI	GCTCC	8 cut(s)	228, 789, 957, 1323, 1422, 1608, 1816, 2097
LweI	GCATC	4 cut(s)	91, 1035, 1181, 2175
MaeI	CTAG	7 cut(s)	48, 572, 891, 1131, 1295, 1986, 2010
MaeII	ACGT	2 cut(s)	24, 654
MaeIII	GTNAC	3 cut(s)	20, 1289, 1640
MalI	GATC	4 cut(s)	6, 447, 1443, 1542
MboI	GATC	4 cut(s)	4, 445, 1441, 1540
MboII	GAAGA	8 cut(s)	77, 149, 223, 604, 1138, 1160, 1163, 1318
MflI	RGATCY	1 cut(s)	1441
MhlI	GDGCHC	4 cut(s)	332, 1427, 1654, 1985
MlsI	TGGCCA	1 cut(s)	1671
MluNI	TGGCCA	1 cut(s)	1671
MlyI	GAGTC	1 cut(s)	1297
MmeI	TCCRAC	2 cut(s)	1759, 2082
Mox20I	TGGCCA	1 cut(s)	1671
Mph1103I	ATGCAT	1 cut(s)	184
MroNI	GCCGGC	3 cut(s)	696, 1093, 2233
MroXI	GAANNNNTTC	4 cut(s)	163, 596, 1310, 1682
MscI	TGGCCA	1 cut(s)	1671
MslI	CAYNNNNRTG	3 cut(s)	203, 351, 1700
Msp20I	TGGCCA	1 cut(s)	1671
MspA1I	CMGCKG	1 cut(s)	1667
MspI	CCGG	7 cut(s)	412, 697, 730, 750, 1094, 2045, 2234
MspR9I	CCNGG	1 cut(s)	1561
MvaI	CCWGG	1 cut(s)	1561
MvnI	CGCG	1 cut(s)	2126
MwoI	GCNNNNNNNGC	9 cut(s)	697, 746, 879, 935, 1099, 1841, 1974, 2030, 2239
NaeI	GCCGGC	3 cut(s)	698, 1095, 2235
NcoI	CCATGG	1 cut(s)	465
NdeII	GATC	4 cut(s)	4, 445, 1441, 1540
NgoMIV	GCCGGC	3 cut(s)	696, 1093, 2233
NheI	GCTAGC	1 cut(s)	890
NmuCI	GTSAC	3 cut(s)	20, 1289, 1640
NruI	TCGCGA	1 cut(s)	2126
NsiI	ATGCAT	1 cut(s)	184
NspI	RCATGY	1 cut(s)	1462
PaeR7I	CTCGAG	2 cut(s)	84, 1880
PagI	TCATGA	1 cut(s)	547
PciI	ACATGT	1 cut(s)	1458
PdiI	GCCGGC	3 cut(s)	698, 1095, 2235
PdmI	GAANNNNTTC	4 cut(s)	163, 596, 1310, 1682
PfeI	GAWTC	6 cut(s)	733, 769, 1021, 1114, 1864, 2254
PflMI	CCANNNNNTGG	2 cut(s)	535, 1630
PleI	GAGTC	1 cut(s)	1296
PpsI	GAGTC	1 cut(s)	1296
PscI	ACATGT	1 cut(s)	1458
PshBI	ATTAAT	2 cut(s)	860, 1955
Psp6I	CCWGG	1 cut(s)	1559
PspGI	CCWGG	1 cut(s)	1559
PspPI	GGNCC	7 cut(s)	266, 557, 699, 1351, 1361, 1790, 1859
PspXI	VCTCGAGB	2 cut(s)	84, 1880
PstNI	CAGNNNCTG	1 cut(s)	1445
PsuI	RGATCY	1 cut(s)	1441
PvuII	CAGCTG	1 cut(s)	1667
RruI	TCGCGA	1 cut(s)	2126
RseI	CAYNNNNRTG	3 cut(s)	203, 351, 1700
Sau3AI	GATC	4 cut(s)	4, 445, 1441, 1540
Sau96I	GGNCC	7 cut(s)	266, 557, 699, 1351, 1361, 1790, 1859
ScaI	AGTACT	1 cut(s)	609
SchI	GAGTC	1 cut(s)	1297
ScrFI	CCNGG	1 cut(s)	1561
SduI	GDGCHC	4 cut(s)	332, 1427, 1654, 1985
SfaNI	GCATC	4 cut(s)	91, 1035, 1181, 2175
SfcI	CTRYAG	1 cut(s)	1437
Sfr274I	CTCGAG	2 cut(s)	84, 1880
SinI	GGWCC	6 cut(s)	266, 557, 1351, 1361, 1790, 1859
SlaI	CTCGAG	2 cut(s)	84, 1880
SmiMI	CAYNNNNRTG	3 cut(s)	203, 351, 1700
SmlI	CTYRAG	2 cut(s)	84, 1880
SmoI	CTYRAG	2 cut(s)	84, 1880
SpeI	ACTAGT	2 cut(s)	47, 1130
SsiI	CCGC	5 cut(s)	560, 855, 894, 1844, 1950
SspI	AATATT	1 cut(s)	1767
SspMI	CTAG	7 cut(s)	48, 572, 891, 1131, 1295, 1986, 2010
StyD4I	CCNGG	1 cut(s)	1559
StyI	CCWWGG	3 cut(s)	465, 1347, 1932
TaaI	ACNGT	2 cut(s)	982, 1538
TaiI	ACGT	2 cut(s)	27, 657
TaqI	TCGA	9 cut(s)	7, 85, 99, 772, 951, 1676, 1825, 1867, 1881
TaqII	GACCGA	3 cut(s)	781, 1778, 1876
TatI	WGTACW	4 cut(s)	607, 1081, 1219, 2221
TfiI	GAWTC	6 cut(s)	733, 769, 1021, 1114, 1864, 2254
TscAI	CASTG	1 cut(s)	2280
TseFI	GTSAC	3 cut(s)	20, 1289, 1640
Tsp45I	GTSAC	3 cut(s)	20, 1289, 1640
TspGWI	ACGGA	2 cut(s)	431, 472
TspRI	CASTG	1 cut(s)	2280
Van91I	CCANNNNNTGG	2 cut(s)	535, 1630
VpaK11BI	GGWCC	6 cut(s)	266, 557, 1351, 1361, 1790, 1859
VspI	ATTAAT	2 cut(s)	860, 1955
XapI	RAATTY	3 cut(s)	1827, 1908, 2115
XceI	RCATGY	1 cut(s)	1462
XhoI	CTCGAG	2 cut(s)	84, 1880
XmiI	GTMKAC	1 cut(s)	1546
XmnI	GAANNNNTTC	4 cut(s)	163, 596, 1310, 1682
XspI	CTAG	7 cut(s)	48, 572, 891, 1131, 1295, 1986, 2010
ZrmI	AGTACT	1 cut(s)	609
Zsp2I	ATGCAT	1 cut(s)	184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.