FvH4_1g02511

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
1406512 .. 1408704
2193 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g02511.t1

Sequence Viewer

Length: 1440 bp
ATGACTGGAAGCTTTCGCTACCCTGCCGTTTTTTTGTTGATTACCTTGTTTTGTCTTCTGTTCTTCCTCCTAATCTTCACACCTTTATCGTCTGGAAACTATCTCAGTATTTCTCTAGTGTCCTCTTTCACCGAACCTTTCGCTAATCCAGAAAAGAGCAGTAACTACTCAACTCCATCGTCGACACAGGTAGCATCTTTAGATGAGGCTCTCACCAGCTCCATGTACCGAAGGATTAGGCACAGGGTTAACAGTACCAAAGAGAAGACTAGTTTGGAAAGAATTGAAGAAGATTTAGCTAAAGCACGAGCATCGATTCTCGAAGCAATTCAGTCGAAAAACTACTCATCGGAGAAAGAAGAGAGTTTTATCCCAAGAGGAAGCATTTACAAAAACCCTTATGCTTTTCACCAGAGTCACCTAGAAATGATGAAGAGGTTCAAGATGTGGAGCTACGAGGAAGGAGAACAACCCTTGGTTCATTTTGGTCCTATGAATAATATATATGGCATTGAAGGGCACTTCATAGATGAAATAGAAAGGGAGGGGAGTCCATTTAGGGCTACACATCCTGATGAGGCACACATGTTTTTCCTCCCATTTAGTGTAGCTAACATTGTTCAATATGTTTACTTGCCTATCACTAAAAAACAAGACTACCACCGTGATCGTCTACAACAGATTGCCATGGACTACATTGGCGTTGTCGCACACAAGTATCCCTACTGGAATAGGAGCAAAGGTGCCGACCATTTCATGGCTTCATGTCACGATTGGGCACCGGAGATTTCAGTAGGCAAACCGGAGCTTTTCAGGAACTTCATTAGAGTGTTGTGCAATGCCAACACCTCTGAAGGGTTCCAGCCTAAGAGAGATGTTCCACTACCTGAAATATTTGTACCTACCGGAAAGCTTGGTCCCCCGAATCTGGGTCAGGCTCCGAACAATCGTCAAATTCTGGCATTCTTTGCCGGAAGAGTGCATGGACCGATCCGACCTATCTTGCTCGAGCATTGGAAGGACAAAGATAACGAAGTTCGAGTCCACGAGAAGCTTCCCAAGGGCATGAACTACACCAAATTAATGGGACAAAGCAAGTTTTGCTTATGCCCTAGTGGTTTTGAAGTGGCAAGCCCGAGGGTTGTGGAGGCATTGTATGCAGGTTGTGTTCCGGTGTTAATTTCTGACAACTACTCATTACCCTTCAGTGATGTACTTGATTGGAGCCAATTTTCGATACAAGTTCCTGTCGCGAAAATACCAGAAATCAAGACCATCTTACAAGCAATTCCAAATGAGGAGTACCTAAAGATGCAGAGGAGGGTTCTAAAAGTGCAGAGGCATTTTGTACTCAACAAGCCGGCTAAGCCATTTGATGTGATTCATATGGTACTTCATTCAGTGTGGTTGAGACGACTTAATTTTAAGATTGAAACTTGA

Protein Analysis

480

Amino Acids

55.13

Weight (kDa)

8.88

Isoelectric Point (pI)

50.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 129 - 430 2.3e-61 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1151
AccB1I GGYRCC 2 cut(s) 743, 778
AccB7I CCANNNNNTGG 1 cut(s) 757
AccI GTMKAC 2 cut(s) 182, 673
AccII CGCG 1 cut(s) 1253
AclWI GGATC 1 cut(s) 985
AcsI RAATTY 1 cut(s) 954
AcuI CTGAAG 2 cut(s) 873, 1189
AfaI GTAC 7 cut(s) 227, 256, 900, 1215, 1304, 1350, 1392
AfiI CCNNNNNNNGG 4 cut(s) 757, 855, 928, 929
AflIII ACRYGT 1 cut(s) 585
AgsI TTSAA 6 cut(s) 287, 442, 515, 623, 1124, 1433
AhlI ACTAGT 1 cut(s) 269
AjuI GAANNNNNNNTTGG 2 cut(s) 257, 289
AluBI AGCT 8 cut(s) 12, 219, 299, 453, 611, 808, 913, 1054
AluI AGCT 8 cut(s) 12, 219, 299, 453, 611, 808, 913, 1054
Alw26I GTCTC 1 cut(s) 1405
AlwI GGATC 1 cut(s) 985
Ama87I CYCGRG 2 cut(s) 1007, 1135
ApoI RAATTY 1 cut(s) 954
ArsI GACNNNNNNTTYG 2 cut(s) 1026, 1058
AseI ATTAAT 1 cut(s) 1082
Asp700I GAANNNNTTC 2 cut(s) 327, 437
AspS9I GGNCC 3 cut(s) 488, 917, 986
AsuHPI GGTGA 4 cut(s) 121, 205, 401, 410
AvaI CYCGRG 2 cut(s) 1007, 1135
AvaII GGWCC 3 cut(s) 488, 917, 986
BaeGI GKGCMC 2 cut(s) 522, 781
BaeI ACNNNNGTAYC 2 cut(s) 701, 734
BanI GGYRCC 2 cut(s) 743, 778
BauI CACGAG 2 cut(s) 306, 1046
BbsI GAAGAC 2 cut(s) 47, 272
BccI CCATC 2 cut(s) 184, 1283
BceAI ACGGC 1 cut(s) 11
BcgI CGANNNNNNTGC 4 cut(s) 294, 315, 328, 349
BciVI GTATCC 1 cut(s) 729
BcoDI GTCTC 1 cut(s) 1405
BcuI ACTAGT 1 cut(s) 269
BfaI CTAG 4 cut(s) 116, 270, 422, 1113
BfuAI ACCTGC 1 cut(s) 1151
BfuI GTATCC 1 cut(s) 729
BlpI GCTNAGC 1 cut(s) 1365
Bme18I GGWCC 3 cut(s) 488, 917, 986
BmeT110I CYCGRG 2 cut(s) 1007, 1135
BmgT120I GGNCC 3 cut(s) 488, 917, 986
BmiI GGNNCC 6 cut(s) 745, 780, 860, 919, 939, 1226
BmsI GCATC 3 cut(s) 203, 320, 1302
BpiI GAAGAC 2 cut(s) 47, 272
Bpu1102I GCTNAGC 1 cut(s) 1365
Bsa29I ATCGAT 1 cut(s) 314
BsaJI CCNNGG 4 cut(s) 474, 687, 1059, 1136
BsaWI WCCGGW 4 cut(s) 781, 802, 905, 1171
BsaXI ACNNNNNCTCC 4 cut(s) 727, 757, 1139, 1169
Bsc4I CCNNNNNNNGG 4 cut(s) 757, 855, 928, 929
Bse118I RCCGGY 1 cut(s) 1360
Bse1I ACTGG 2 cut(s) 10, 731
Bse3DI GCAATG 1 cut(s) 844
BseCI ATCGAT 1 cut(s) 314
BseDI CCNNGG 4 cut(s) 474, 687, 1059, 1136
BseGI GGATG 1 cut(s) 568
BseLI CCNNNNNNNGG 4 cut(s) 757, 855, 928, 929
BseMI GCAATG 1 cut(s) 844
BseMII CTCAG 1 cut(s) 118
BseNI ACTGG 2 cut(s) 10, 731
BseRI GAGGAG 2 cut(s) 1313, 1333
BseSI GKGCMC 2 cut(s) 522, 781
BsgI GTGCAG 1 cut(s) 1355
Bsh1236I CGCG 1 cut(s) 1253
BshNI GGYRCC 2 cut(s) 743, 778
BshVI ATCGAT 1 cut(s) 314
BsiHKCI CYCGRG 2 cut(s) 1007, 1135
BsiSI CCGG 6 cut(s) 782, 803, 906, 972, 1172, 1361
BslFI GGGAC 2 cut(s) 903, 1101
BslI CCNNNNNNNGG 4 cut(s) 757, 855, 928, 929
BsmAI GTCTC 1 cut(s) 1405
BsmBI CGTCTC 1 cut(s) 1405
BsmFI GGGAC 2 cut(s) 903, 1101
BsmI GAATGC 1 cut(s) 962
BsoBI CYCGRG 2 cut(s) 1007, 1135
Bsp1286I GDGCHC 2 cut(s) 522, 781
Bsp143I GATC 2 cut(s) 667, 990
Bsp1720I GCTNAGC 1 cut(s) 1365
Bsp19I CCATGG 1 cut(s) 687
Bsp68I TCGCGA 1 cut(s) 1253
BspCNI CTCAG 1 cut(s) 117
BspDI ATCGAT 1 cut(s) 314
BspFNI CGCG 1 cut(s) 1253
BspLI GGNNCC 6 cut(s) 745, 780, 860, 919, 939, 1226
BspMI ACCTGC 1 cut(s) 1151
BspPI GGATC 1 cut(s) 985
BspT107I GGYRCC 2 cut(s) 743, 778
BsrDI GCAATG 1 cut(s) 844
BsrFI RCCGGY 1 cut(s) 1360
BsrI ACTGG 2 cut(s) 10, 731
BssAI RCCGGY 1 cut(s) 1360
BssECI CCNNGG 4 cut(s) 474, 687, 1059, 1136
BssMI GATC 2 cut(s) 667, 990
BssSI CACGAG 2 cut(s) 306, 1046
BssT1I CCWWGG 3 cut(s) 474, 687, 1059
Bst2BI CACGAG 2 cut(s) 306, 1046
Bst4CI ACNGT 2 cut(s) 254, 665
Bst6I CTCTTC 3 cut(s) 354, 428, 970
BstAPI GCANNNNNTGC 3 cut(s) 968, 1101, 1157
BstC8I GCNNGC 2 cut(s) 1132, 1362
BstDEI CTNAG 3 cut(s) 104, 867, 1365
BstDSI CCRYGG 1 cut(s) 687
BstF5I GGATG 1 cut(s) 568
BstFNI CGCG 1 cut(s) 1253
BstKTI GATC 2 cut(s) 670, 993
BstMAI GTCTC 1 cut(s) 1405
BstMBI GATC 2 cut(s) 667, 990
BstMWI GCNNNNNNNGC 4 cut(s) 968, 1101, 1157, 1366
BstNSI RCATGY 1 cut(s) 589
BstSLI GKGCMC 2 cut(s) 522, 781
BstUI CGCG 1 cut(s) 1253
BstV2I GAAGAC 2 cut(s) 47, 272
BstXI CCANNNNNNTGG 1 cut(s) 1084
Bsu15I ATCGAT 1 cut(s) 314
BsuI GTATCC 1 cut(s) 729
BsuTUI ATCGAT 1 cut(s) 314
BtgI CCRYGG 1 cut(s) 687
BtsCI GGATG 1 cut(s) 568
BtsIMutI CAGTG 2 cut(s) 1213, 1407
BtuMI TCGCGA 1 cut(s) 1253
BveI ACCTGC 1 cut(s) 1151
Cac8I GCNNGC 2 cut(s) 1132, 1362
Cfr10I RCCGGY 1 cut(s) 1360
Cfr13I GGNCC 3 cut(s) 488, 917, 986
ClaI ATCGAT 1 cut(s) 314
Csp6I GTAC 7 cut(s) 226, 255, 899, 1214, 1303, 1349, 1391
CviAII CATG 7 cut(s) 223, 586, 688, 757, 765, 983, 1066
CviQI GTAC 7 cut(s) 226, 255, 899, 1214, 1303, 1349, 1391
DdeI CTNAG 3 cut(s) 104, 867, 1365
DpnI GATC 2 cut(s) 669, 992
DpnII GATC 2 cut(s) 667, 990
Eam1104I CTCTTC 3 cut(s) 354, 428, 970
EarI CTCTTC 3 cut(s) 354, 428, 970
Eco130I CCWWGG 3 cut(s) 474, 687, 1059
Eco47I GGWCC 3 cut(s) 488, 917, 986
Eco57I CTGAAG 2 cut(s) 873, 1189
Eco88I CYCGRG 2 cut(s) 1007, 1135
EcoT14I CCWWGG 3 cut(s) 474, 687, 1059
ErhI CCWWGG 3 cut(s) 474, 687, 1059
Esp3I CGTCTC 1 cut(s) 1405
FaeI CATG 7 cut(s) 226, 589, 691, 760, 768, 986, 1069
FalI AAGNNNNNCTT 4 cut(s) 1088, 1120, 1262, 1294
FaqI GGGAC 2 cut(s) 903, 1101
FatI CATG 7 cut(s) 222, 585, 687, 756, 764, 982, 1065
FauNDI CATATG 1 cut(s) 1386
FblI GTMKAC 2 cut(s) 182, 673
FokI GGATG 1 cut(s) 555
FspBI CTAG 4 cut(s) 116, 270, 422, 1113
HapII CCGG 6 cut(s) 782, 803, 906, 972, 1172, 1361
Hin1II CATG 7 cut(s) 226, 589, 691, 760, 768, 986, 1069
HincII GTYRAC 2 cut(s) 183, 250
HindII GTYRAC 2 cut(s) 183, 250
HindIII AAGCTT 3 cut(s) 10, 911, 1052
HinfI GANTC 6 cut(s) 316, 415, 550, 925, 1041, 1381
HpaI GTTAAC 1 cut(s) 250
HpaII CCGG 6 cut(s) 782, 803, 906, 972, 1172, 1361
HphI GGTGA 4 cut(s) 121, 205, 401, 410
Hpy166II GTNNAC 5 cut(s) 183, 250, 631, 674, 1045
Hpy188I TCNGA 5 cut(s) 352, 853, 942, 995, 1186
Hpy188III TCNNGA 9 cut(s) 93, 149, 320, 442, 572, 770, 814, 1252, 1270
Hpy8I GTNNAC 5 cut(s) 183, 250, 631, 674, 1045
Hpy99I CGWCG 1 cut(s) 184
HpyAV CCTTC 6 cut(s) 225, 455, 509, 848, 1012, 1213
HpyCH4III ACNGT 2 cut(s) 254, 665
HpyCH4V TGCA 5 cut(s) 837, 982, 1160, 1315, 1336
HpyF10VI GCNNNNNNNGC 4 cut(s) 968, 1101, 1157, 1366
HpyF3I CTNAG 3 cut(s) 104, 867, 1365
Hsp92II CATG 7 cut(s) 226, 589, 691, 760, 768, 986, 1069
KroI GCCGGC 1 cut(s) 1360
KroNI GCCGGC 1 cut(s) 1362
KspAI GTTAAC 1 cut(s) 250
Kzo9I GATC 2 cut(s) 667, 990
LmnI GCTCC 6 cut(s) 224, 450, 735, 805, 943, 1224
LweI GCATC 3 cut(s) 203, 320, 1302
MaeI CTAG 4 cut(s) 116, 270, 422, 1113
MaeIII GTNAC 3 cut(s) 161, 416, 767
MalI GATC 2 cut(s) 669, 992
MboI GATC 2 cut(s) 667, 990
MboII GAAGA 9 cut(s) 47, 55, 67, 277, 299, 302, 371, 445, 987
MhlI GDGCHC 2 cut(s) 522, 781
MluCI AATT 8 cut(s) 282, 327, 954, 1079, 1179, 1229, 1287, 1420
MlyI GAGTC 3 cut(s) 424, 559, 1050
MmeI TCCRAC 1 cut(s) 1018
MroNI GCCGGC 1 cut(s) 1360
MroXI GAANNNNTTC 2 cut(s) 327, 437
MseI TTAA 5 cut(s) 249, 1082, 1178, 1419, 1425
MslI CAYNNNNRTG 2 cut(s) 573, 827
MspI CCGG 6 cut(s) 782, 803, 906, 972, 1172, 1361
Mva1269I GAATGC 1 cut(s) 962
MvnI CGCG 1 cut(s) 1253
MwoI GCNNNNNNNGC 4 cut(s) 968, 1101, 1157, 1366
NaeI GCCGGC 1 cut(s) 1362
NcoI CCATGG 1 cut(s) 687
NdeI CATATG 1 cut(s) 1386
NdeII GATC 2 cut(s) 667, 990
NgoMIV GCCGGC 1 cut(s) 1360
NlaIII CATG 7 cut(s) 226, 589, 691, 760, 768, 986, 1069
NlaIV GGNNCC 6 cut(s) 745, 780, 860, 919, 939, 1226
NmuCI GTSAC 2 cut(s) 416, 767
NruI TCGCGA 1 cut(s) 1253
NspI RCATGY 1 cut(s) 589
PaeR7I CTCGAG 1 cut(s) 1007
PciI ACATGT 1 cut(s) 585
PctI GAATGC 1 cut(s) 962
PdiI GCCGGC 1 cut(s) 1362
PdmI GAANNNNTTC 2 cut(s) 327, 437
PfeI GAWTC 3 cut(s) 316, 925, 1381
PflMI CCANNNNNTGG 1 cut(s) 757
PleI GAGTC 3 cut(s) 423, 558, 1049
PpsI GAGTC 3 cut(s) 423, 558, 1049
PscI ACATGT 1 cut(s) 585
PshBI ATTAAT 1 cut(s) 1082
PspN4I GGNNCC 6 cut(s) 745, 780, 860, 919, 939, 1226
PspPI GGNCC 3 cut(s) 488, 917, 986
PspXI VCTCGAGB 1 cut(s) 1007
RruI TCGCGA 1 cut(s) 1253
RsaI GTAC 7 cut(s) 227, 256, 900, 1215, 1304, 1350, 1392
RsaNI GTAC 7 cut(s) 226, 255, 899, 1214, 1303, 1349, 1391
RseI CAYNNNNRTG 2 cut(s) 573, 827
SalI GTCGAC 1 cut(s) 181
SaqAI TTAA 5 cut(s) 249, 1082, 1178, 1419, 1425
Sau3AI GATC 2 cut(s) 667, 990
Sau96I GGNCC 3 cut(s) 488, 917, 986
SchI GAGTC 3 cut(s) 424, 559, 1050
SduI GDGCHC 2 cut(s) 522, 781
SfaNI GCATC 3 cut(s) 203, 320, 1302
Sfr274I CTCGAG 1 cut(s) 1007
SinI GGWCC 3 cut(s) 488, 917, 986
SlaI CTCGAG 1 cut(s) 1007
SmiMI CAYNNNNRTG 2 cut(s) 573, 827
SmlI CTYRAG 1 cut(s) 1007
SmoI CTYRAG 1 cut(s) 1007
SpeI ACTAGT 1 cut(s) 269
Sse9I AATT 8 cut(s) 282, 327, 954, 1079, 1179, 1229, 1287, 1420
SspI AATATT 1 cut(s) 894
SspMI CTAG 4 cut(s) 116, 270, 422, 1113
StyI CCWWGG 3 cut(s) 474, 687, 1059
TaaI ACNGT 2 cut(s) 254, 665
TaqI TCGA 7 cut(s) 182, 314, 321, 335, 1008, 1039, 1235
TaqII GACCGA 1 cut(s) 1003
TasI AATT 8 cut(s) 282, 327, 954, 1079, 1179, 1229, 1287, 1420
TatI WGTACW 2 cut(s) 1213, 1348
TfiI GAWTC 3 cut(s) 316, 925, 1381
Tru1I TTAA 5 cut(s) 249, 1082, 1178, 1419, 1425
Tru9I TTAA 5 cut(s) 249, 1082, 1178, 1419, 1425
TscAI CASTG 2 cut(s) 1213, 1407
TseFI GTSAC 2 cut(s) 416, 767
Tsp45I GTSAC 2 cut(s) 416, 767
TspRI CASTG 2 cut(s) 1213, 1407
Van91I CCANNNNNTGG 1 cut(s) 757
VpaK11BI GGWCC 3 cut(s) 488, 917, 986
VspI ATTAAT 1 cut(s) 1082
XapI RAATTY 1 cut(s) 954
XceI RCATGY 1 cut(s) 589
XhoI CTCGAG 1 cut(s) 1007
XmiI GTMKAC 2 cut(s) 182, 673
XmnI GAANNNNTTC 2 cut(s) 327, 437
XspI CTAG 4 cut(s) 116, 270, 422, 1113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.