Rw2G002360

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
1945661 .. 1947395
1735 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G002360.1

Sequence Viewer

Length: 1428 bp
ATGAGCTTTCGCTGCCCTGCACTGTTTTTGTTATTTACATTGTTTTGTCTTCTGTTCTTCCTCCTAATCTTCGCACCTTTATCGTCTGAAACCCATCTCAGTATTTCTTTGGTGTCCTCTTTCACTACACCTTTCACTAATCCAGAAAAGAGCAGCAACTCAACTCCATCGACACAAGTAGCTTTTTTAGATGAGGTTCTCACCAGCTCCATGTACCGAAGGATTAGGAACAAGGTTGACGGTACCAAAGAGAAGACTAGTTTGGAGAGAATTGAAGAAGATTTAGCTAAAGCACGAGCATCAATTCTCAGGGCAATTCAGTTTAAAAACTACACATCAGAGAAAGTACAGAGTTTTGTCCCAAGAGGAAGCATTTACAAAAACCCTTATGCTTTTCACCAGAGTCACCTAGAGATGATGAAGAGGTTCAAGCTGTGGAGCTACAAGGAAGGAGAACAACCCTTGGTCCATTTTGGTCCTATGAATGATATATATGGCATTGAAGGACACTTCATAGATGAAATAGAAAGGGAGGGGAGCCCATTTAGGGCTACAGATCCTGATGAGGCACACATGTTTTTCCTCCCATTTAGTGTAGCTAACATTGTTCACTATGTTTACTTGCCTATCACTAAAAAACAGGACTACCACCGTGATCGTCTACAACAGATTACGTGGGACTACATTGGCGTTGTGGCACATAAGTATCCCTATTGGAATAGGAGCAAAGGTGCCGACCATTTTATGGCTTCATGTCACGATTGGGCACCAGAGATTTCAGCTGGCCAATCGAAGCTTTTCAAAAACTTCATTAGAGTGCTTTGCAATGCCAACACCTCTGAAGGGTTCCAACCTAAGAGAGATGTTCCATTACCTGAAATATTTGTACCTTCTGGAAAGCTCGGTCCCCCCAATTTGGGTCAGGCTCCAAACAATCGTCGAATTCTGGCCTTCTTTGCGGGTAGAGTTCATGGACCGATTCGACCAATCTTAATCGAGCATTGGAAGGACAAAGATGACGAAATTCAAGTCCACGAGAAGCTTCCCAAGGGCATGAACTACACCGCATTAATGGGACAAAGCAAGTTTTGCTTGTGCCCTAGTGGTTTTGAAGTGGCAAGCCCTAGAGTTGTGGAGGCATTTTATGCAGGGTGTGTTCCGGTGTTAATTTCCGATAACTACACATTACCCTTTAGTGATGTCCTTGATTGGAGCCAATTTTCAATACAAATTCCCGTCGCGAAAATACAAGAAATCAAGACCATCTTACAAGCAATTCCAAATGAGGAATACCTAAAGATGCAGAGGAAGGTTTTAAAAGTTCGGAGGCATTTTGTACTCAACAAGCCGGCTAAGCCATTTGATGTGATTCACATGGTACTTCATTCAGTGTGGTTGAGACGACTTAATTTTAAGCTTGGAACTTGA

Protein Analysis

475

Amino Acids

54.73

Weight (kDa)

9.15

Isoelectric Point (pI)

51.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 125 - 426 2.1e-62 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 242
AccB1I GGYRCC 3 cut(s) 242, 731, 766
AccB7I CCANNNNNTGG 1 cut(s) 745
AccI GTMKAC 1 cut(s) 661
AccII CGCG 1 cut(s) 1241
AciI CCGC 2 cut(s) 959, 1065
AclWI GGATC 1 cut(s) 551
AcoI YGGCCR 1 cut(s) 784
AcsI RAATTY 3 cut(s) 942, 1023, 1230
AcuI CTGAAG 1 cut(s) 861
AfaI GTAC 6 cut(s) 215, 244, 348, 888, 1338, 1380
AfiI CCNNNNNNNGG 5 cut(s) 547, 745, 843, 916, 917
AflIII ACRYGT 1 cut(s) 573
AgsI TTSAA 7 cut(s) 275, 430, 503, 802, 1028, 1112, 1224
AhlI ACTAGT 1 cut(s) 257
AjuI GAANNNNNNNTTGG 2 cut(s) 245, 277
Alw26I GTCTC 1 cut(s) 1393
AlwI GGATC 1 cut(s) 551
AlwNI CAGNNNCTG 1 cut(s) 560
AoxI GGCC 2 cut(s) 784, 948
ApeKI GCWGC 2 cut(s) 12, 153
ApoI RAATTY 3 cut(s) 942, 1023, 1230
ArsI GACNNNNNNTTYG 2 cut(s) 1014, 1046
AseI ATTAAT 1 cut(s) 1070
Asp700I GAANNNNTTC 2 cut(s) 425, 797
Asp718I GGTACC 1 cut(s) 242
AspS9I GGNCC 4 cut(s) 466, 476, 905, 974
AsuHPI GGTGA 3 cut(s) 193, 389, 398
AvaII GGWCC 4 cut(s) 466, 476, 905, 974
BaeGI GKGCMC 2 cut(s) 769, 1100
BaeI ACNNNNGTAYC 2 cut(s) 689, 722
BalI TGGCCA 1 cut(s) 786
BanI GGYRCC 3 cut(s) 242, 731, 766
BanII GRGCYC 1 cut(s) 542
BauI CACGAG 2 cut(s) 294, 1034
BbsI GAAGAC 2 cut(s) 41, 260
BbvI GCAGC 1 cut(s) 165
BccI CCATC 3 cut(s) 102, 175, 1271
BcgI CGANNNNNNTGC 2 cut(s) 63, 97
BciVI GTATCC 1 cut(s) 717
BcoDI GTCTC 1 cut(s) 1393
BcuI ACTAGT 1 cut(s) 257
BfaI CTAG 4 cut(s) 258, 410, 1101, 1125
BfmI CTRYAG 1 cut(s) 552
BfuI GTATCC 1 cut(s) 717
BisI GCNGC 2 cut(s) 13, 154
BlpI GCTNAGC 1 cut(s) 1353
BlsI GCNGC 2 cut(s) 14, 155
Bme18I GGWCC 4 cut(s) 466, 476, 905, 974
BmgT120I GGNCC 4 cut(s) 466, 476, 905, 974
BmiI GGNNCC 8 cut(s) 244, 539, 733, 768, 848, 907, 927, 1214
BmsI GCATC 2 cut(s) 308, 1290
BpiI GAAGAC 2 cut(s) 41, 260
Bpu1102I GCTNAGC 1 cut(s) 1353
BsaAI YACGTR 1 cut(s) 675
BsaJI CCNNGG 2 cut(s) 462, 1047
BsaWI WCCGGW 1 cut(s) 1159
BsaXI ACNNNNNCTCC 2 cut(s) 715, 745
Bsc4I CCNNNNNNNGG 5 cut(s) 547, 745, 843, 916, 917
Bse118I RCCGGY 1 cut(s) 1348
Bse3DI GCAATG 1 cut(s) 832
BseDI CCNNGG 2 cut(s) 462, 1047
BseLI CCNNNNNNNGG 5 cut(s) 547, 745, 843, 916, 917
BseMI GCAATG 1 cut(s) 832
BseMII CTCAG 2 cut(s) 112, 322
BseSI GKGCMC 2 cut(s) 769, 1100
BseXI GCAGC 1 cut(s) 165
Bsh1236I CGCG 1 cut(s) 1241
BshFI GGCC 2 cut(s) 786, 950
BshNI GGYRCC 3 cut(s) 242, 731, 766
BsiSI CCGG 2 cut(s) 1160, 1349
BslFI GGGAC 4 cut(s) 344, 692, 891, 1089
BslI CCNNNNNNNGG 5 cut(s) 547, 745, 843, 916, 917
BsmAI GTCTC 1 cut(s) 1393
BsmBI CGTCTC 1 cut(s) 1393
BsmFI GGGAC 4 cut(s) 344, 692, 891, 1089
BsnI GGCC 2 cut(s) 786, 950
Bsp1286I GDGCHC 3 cut(s) 542, 769, 1100
Bsp143I GATC 2 cut(s) 556, 655
Bsp1720I GCTNAGC 1 cut(s) 1353
Bsp68I TCGCGA 1 cut(s) 1241
BspACI CCGC 2 cut(s) 959, 1065
BspANI GGCC 2 cut(s) 786, 950
BspCNI CTCAG 2 cut(s) 111, 321
BspFNI CGCG 1 cut(s) 1241
BspLI GGNNCC 8 cut(s) 244, 539, 733, 768, 848, 907, 927, 1214
BspPI GGATC 1 cut(s) 551
BspT107I GGYRCC 3 cut(s) 242, 731, 766
BsrDI GCAATG 1 cut(s) 832
BsrFI RCCGGY 1 cut(s) 1348
BssAI RCCGGY 1 cut(s) 1348
BssECI CCNNGG 2 cut(s) 462, 1047
BssMI GATC 2 cut(s) 556, 655
BssSI CACGAG 2 cut(s) 294, 1034
BssT1I CCWWGG 2 cut(s) 462, 1047
Bst2BI CACGAG 2 cut(s) 294, 1034
Bst4CI ACNGT 3 cut(s) 24, 242, 653
Bst6I CTCTTC 1 cut(s) 416
BstAPI GCANNNNNTGC 2 cut(s) 1089, 1145
BstBAI YACGTR 1 cut(s) 675
BstC8I GCNNGC 3 cut(s) 784, 1120, 1350
BstDEI CTNAG 4 cut(s) 98, 308, 855, 1353
BstFNI CGCG 1 cut(s) 1241
BstKTI GATC 2 cut(s) 559, 658
BstMAI GTCTC 1 cut(s) 1393
BstMBI GATC 2 cut(s) 556, 655
BstMWI GCNNNNNNNGC 5 cut(s) 12, 956, 1089, 1145, 1354
BstNSI RCATGY 1 cut(s) 577
BstSFI CTRYAG 1 cut(s) 552
BstSLI GKGCMC 2 cut(s) 769, 1100
BstUI CGCG 1 cut(s) 1241
BstV1I GCAGC 1 cut(s) 165
BstV2I GAAGAC 2 cut(s) 41, 260
BstX2I RGATCY 1 cut(s) 556
BstYI RGATCY 1 cut(s) 556
BsuI GTATCC 1 cut(s) 717
BsuRI GGCC 2 cut(s) 786, 950
BtsIMutI CAGTG 2 cut(s) 20, 1395
BtuMI TCGCGA 1 cut(s) 1241
Cac8I GCNNGC 3 cut(s) 784, 1120, 1350
CaiI CAGNNNCTG 1 cut(s) 560
Cfr10I RCCGGY 1 cut(s) 1348
Cfr13I GGNCC 4 cut(s) 466, 476, 905, 974
Csp6I GTAC 6 cut(s) 214, 243, 347, 887, 1337, 1379
CviAII CATG 6 cut(s) 211, 574, 753, 971, 1054, 1375
CviQI GTAC 6 cut(s) 214, 243, 347, 887, 1337, 1379
DdeI CTNAG 4 cut(s) 98, 308, 855, 1353
DpnI GATC 2 cut(s) 558, 657
DpnII GATC 2 cut(s) 556, 655
DraI TTTAAA 2 cut(s) 325, 1317
EaeI YGGCCR 1 cut(s) 784
Eam1104I CTCTTC 1 cut(s) 416
EarI CTCTTC 1 cut(s) 416
Eco130I CCWWGG 2 cut(s) 462, 1047
Eco24I GRGCYC 1 cut(s) 542
Eco47I GGWCC 4 cut(s) 466, 476, 905, 974
Eco57I CTGAAG 1 cut(s) 861
EcoRI GAATTC 1 cut(s) 942
EcoT14I CCWWGG 2 cut(s) 462, 1047
EcoT38I GRGCYC 1 cut(s) 542
ErhI CCWWGG 2 cut(s) 462, 1047
Esp3I CGTCTC 1 cut(s) 1393
FaeI CATG 6 cut(s) 214, 577, 756, 974, 1057, 1378
FalI AAGNNNNNCTT 4 cut(s) 1076, 1108, 1250, 1282
FaqI GGGAC 4 cut(s) 344, 692, 891, 1089
FatI CATG 6 cut(s) 210, 573, 752, 970, 1053, 1374
FauI CCCGC 1 cut(s) 952
FblI GTMKAC 1 cut(s) 661
Fnu4HI GCNGC 2 cut(s) 13, 154
FriOI GRGCYC 1 cut(s) 542
Fsp4HI GCNGC 2 cut(s) 13, 154
FspBI CTAG 4 cut(s) 258, 410, 1101, 1125
GluI GCNGC 2 cut(s) 13, 154
HaeIII GGCC 2 cut(s) 786, 950
HapII CCGG 2 cut(s) 1160, 1349
Hin1II CATG 6 cut(s) 214, 577, 756, 974, 1057, 1378
HincII GTYRAC 1 cut(s) 238
HindII GTYRAC 1 cut(s) 238
HindIII AAGCTT 3 cut(s) 794, 1040, 1415
HinfI GANTC 3 cut(s) 403, 979, 1369
HpaII CCGG 2 cut(s) 1160, 1349
HphI GGTGA 3 cut(s) 193, 389, 398
Hpy166II GTNNAC 5 cut(s) 238, 610, 619, 662, 1033
Hpy188I TCNGA 5 cut(s) 88, 340, 841, 1174, 1326
Hpy188III TCNNGA 6 cut(s) 143, 560, 758, 894, 1240, 1258
Hpy8I GTNNAC 5 cut(s) 238, 610, 619, 662, 1033
Hpy99I CGWCG 2 cut(s) 942, 1241
HpyAV CCTTC 8 cut(s) 213, 443, 497, 836, 900, 961, 1000, 1303
HpyCH4III ACNGT 3 cut(s) 24, 242, 653
HpyCH4IV ACGT 1 cut(s) 674
HpyCH4V TGCA 4 cut(s) 20, 825, 1148, 1303
HpyF10VI GCNNNNNNNGC 5 cut(s) 12, 956, 1089, 1145, 1354
HpyF3I CTNAG 4 cut(s) 98, 308, 855, 1353
HpySE526I ACGT 1 cut(s) 674
Hsp92II CATG 6 cut(s) 214, 577, 756, 974, 1057, 1378
KpnI GGTACC 1 cut(s) 246
KroI GCCGGC 1 cut(s) 1348
KroNI GCCGGC 1 cut(s) 1350
Kzo9I GATC 2 cut(s) 556, 655
LmnI GCTCC 6 cut(s) 212, 438, 537, 723, 931, 1212
Lsp1109I GCAGC 1 cut(s) 165
LweI GCATC 2 cut(s) 308, 1290
MaeI CTAG 4 cut(s) 258, 410, 1101, 1125
MaeII ACGT 1 cut(s) 674
MaeIII GTNAC 2 cut(s) 404, 755
MalI GATC 2 cut(s) 558, 657
MboI GATC 2 cut(s) 556, 655
MboII GAAGA 7 cut(s) 41, 49, 61, 265, 287, 290, 433
MflI RGATCY 1 cut(s) 556
MhlI GDGCHC 3 cut(s) 542, 769, 1100
MlsI TGGCCA 1 cut(s) 786
MluNI TGGCCA 1 cut(s) 786
MlyI GAGTC 1 cut(s) 412
MmeI TCCRAC 1 cut(s) 874
Mox20I TGGCCA 1 cut(s) 786
MroNI GCCGGC 1 cut(s) 1348
MroXI GAANNNNTTC 2 cut(s) 425, 797
MscI TGGCCA 1 cut(s) 786
MseI TTAA 7 cut(s) 324, 992, 1070, 1166, 1316, 1407, 1413
MslI CAYNNNNRTG 1 cut(s) 815
Msp20I TGGCCA 1 cut(s) 786
MspA1I CMGCKG 1 cut(s) 782
MspI CCGG 2 cut(s) 1160, 1349
MvnI CGCG 1 cut(s) 1241
MwoI GCNNNNNNNGC 5 cut(s) 12, 956, 1089, 1145, 1354
NaeI GCCGGC 1 cut(s) 1350
NdeII GATC 2 cut(s) 556, 655
NgoMIV GCCGGC 1 cut(s) 1348
NlaIII CATG 6 cut(s) 214, 577, 756, 974, 1057, 1378
NlaIV GGNNCC 8 cut(s) 244, 539, 733, 768, 848, 907, 927, 1214
NmuCI GTSAC 2 cut(s) 404, 755
NruI TCGCGA 1 cut(s) 1241
NspI RCATGY 1 cut(s) 577
PciI ACATGT 1 cut(s) 573
PdiI GCCGGC 1 cut(s) 1350
PdmI GAANNNNTTC 2 cut(s) 425, 797
PfeI GAWTC 2 cut(s) 979, 1369
PflMI CCANNNNNTGG 1 cut(s) 745
PkrI GCNGC 2 cut(s) 14, 155
PleI GAGTC 1 cut(s) 411
PpsI GAGTC 1 cut(s) 411
Ppu21I YACGTR 1 cut(s) 675
PscI ACATGT 1 cut(s) 573
PshBI ATTAAT 1 cut(s) 1070
PspN4I GGNNCC 8 cut(s) 244, 539, 733, 768, 848, 907, 927, 1214
PspPI GGNCC 4 cut(s) 466, 476, 905, 974
PstNI CAGNNNCTG 1 cut(s) 560
PsuI RGATCY 1 cut(s) 556
PvuII CAGCTG 1 cut(s) 782
RruI TCGCGA 1 cut(s) 1241
RsaI GTAC 6 cut(s) 215, 244, 348, 888, 1338, 1380
RsaNI GTAC 6 cut(s) 214, 243, 347, 887, 1337, 1379
RseI CAYNNNNRTG 1 cut(s) 815
SaqAI TTAA 7 cut(s) 324, 992, 1070, 1166, 1316, 1407, 1413
SatI GCNGC 2 cut(s) 13, 154
Sau3AI GATC 2 cut(s) 556, 655
Sau96I GGNCC 4 cut(s) 466, 476, 905, 974
SchI GAGTC 1 cut(s) 412
SduI GDGCHC 3 cut(s) 542, 769, 1100
SfaNI GCATC 2 cut(s) 308, 1290
SfcI CTRYAG 1 cut(s) 552
SinI GGWCC 4 cut(s) 466, 476, 905, 974
SmiMI CAYNNNNRTG 1 cut(s) 815
SpeI ACTAGT 1 cut(s) 257
SsiI CCGC 2 cut(s) 959, 1065
SspI AATATT 1 cut(s) 882
SspMI CTAG 4 cut(s) 258, 410, 1101, 1125
StyI CCWWGG 2 cut(s) 462, 1047
TaaI ACNGT 3 cut(s) 24, 242, 653
TaiI ACGT 1 cut(s) 677
TaqI TCGA 5 cut(s) 170, 791, 940, 982, 996
TaqII GACCGA 2 cut(s) 893, 991
TatI WGTACW 2 cut(s) 346, 1336
TfiI GAWTC 2 cut(s) 979, 1369
Tru1I TTAA 7 cut(s) 324, 992, 1070, 1166, 1316, 1407, 1413
Tru9I TTAA 7 cut(s) 324, 992, 1070, 1166, 1316, 1407, 1413
TscAI CASTG 2 cut(s) 27, 1395
TseFI GTSAC 2 cut(s) 404, 755
TseI GCWGC 2 cut(s) 12, 153
Tsp45I GTSAC 2 cut(s) 404, 755
TspDTI ATGAA 9 cut(s) 434, 497, 502, 534, 741, 799, 959, 1070, 1373
TspRI CASTG 2 cut(s) 27, 1395
Van91I CCANNNNNTGG 1 cut(s) 745
VpaK11BI GGWCC 4 cut(s) 466, 476, 905, 974
VspI ATTAAT 1 cut(s) 1070
XapI RAATTY 3 cut(s) 942, 1023, 1230
XceI RCATGY 1 cut(s) 577
XmiI GTMKAC 1 cut(s) 661
XmnI GAANNNNTTC 2 cut(s) 425, 797
XspI CTAG 4 cut(s) 258, 410, 1101, 1125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.