RLG00000015876

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
2026716 .. 2028436
1721 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015876

Sequence Viewer

Length: 1434 bp
ATGACTGGAAGCTTTCGCTGCCCTGCACTTTTTTTGTTATTTACATTGTTTTGTCTTCTGTTCTTCCTCCTAATCTTCGCACCTTTATCGTCTGAAAAGCATCTCAGTATTTCTTTGGTGTCCTCTTTCACTACACCTTTCACTAATCCAGAAAAGAGCAGCAACTCAACTCCATCGACACAAGTAGCTTTTTTAGATGAGGTTCTCACCAGCTCCATGTACCGAAGGATTAGGAACAAGGTTAACGGTACCAAAGAGAAGGCTAGTTTGGAGAGAATTGAAAAAGATTTAGCTAAAGCACGAGCATCAATTCTCAGGGCAATTCAGTTTAAAAACTACACATCAGAGAAAGTACAGAGTTTTGTCCCAAGAGGAAGCATTTACAAAAACCCTTATGCTTTTCACCAGAGTCACCTAGAGATGATGAAGAGGTTCAAGATGTGGAGCTACAAGGAAGGAGAACAACCCTTGGTCCATTTTGGTCCTATGAATGATATATATGGCATTGAAGGACACTTCATAGATGAAATAGAAAGGGAGGGGAGCCCATTTAGGGCTACAGATCCTGATGAGGCACACATGTTTTTCCTCCCATTTAGTGTATCTAACATTGTTCGCTATGTTTACTTGCCTATCACTAAAAAACAGGACTACCACCGTGATCGTCTACAACAGATTACCAGGGACTACATTGGCGTTGTGGCACATAAGTATCCCTATTGGAATAGGAGCAAAGGTGCCGACCATTTTATGGCTTCATGTCACGATTGGGCACCAGAGATTTCAGCTGGCCAATCGAAGCTTTTCAAAAACTTCATTAGAGTGCTTTGCAATGCCAACACCTCTGAAGGGTTCCAACCTAAGAGAGATGTTCCACTACCTGAAATATTTGTACCTTCTGGAAAGCTCGGTCCCCCCAATTTGGGTCAGGCTCCAAACAATCGTCGAATTCTGGCCTTCTTTGCGGGTAGAGTTCATGGACCGATTCGACCAATCTTGCTCGAGCATTGGAAGGACAAAGATGACGAAATTCAAGTCCACGAGAAGCTTCCCAAGGGCATGAACTACACCGCATTAATGGGACAAAGCAAGTTTTGCTTGTGCCCTAGTGGTTTTGAAGTGGCAAGCCCTAGAGTTGTGGAGGCATTTTATGCAGGGTGTGTTCCGGTGTTAATTTCCGACAACTACACATTACCCTTTAGCGATGTCCTTGATTGGAGCCAATTTTCATTACAAATTCCCGTCGCGAAAATACAAGAAATCAAGACCATCTTACAAGCAATTCCAAATGAGGAATACCTAAAGATGCAGAGGAGAGTTTTAAAAGTTCGGAGGCATTTTGTACTCAACAAGCCGGCTAAGCCATTTGATGTGATTCACATGGTACTTCATTCAGTGTGGTTGAGACGACTTAATTTTAAGCTTGGAACTTGA

Protein Analysis

478

Amino Acids

54.93

Weight (kDa)

9.45

Isoelectric Point (pI)

49.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 127 - 428 1.2e-62 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 248
AccB1I GGYRCC 3 cut(s) 248, 737, 772
AccB7I CCANNNNNTGG 1 cut(s) 751
AccI GTMKAC 1 cut(s) 667
AccII CGCG 1 cut(s) 1247
AciI CCGC 2 cut(s) 965, 1071
AclWI GGATC 1 cut(s) 557
AcoI YGGCCR 1 cut(s) 790
AcsI RAATTY 3 cut(s) 948, 1029, 1236
AcuI CTGAAG 1 cut(s) 867
AfaI GTAC 6 cut(s) 221, 250, 354, 894, 1344, 1386
AfiI CCNNNNNNNGG 5 cut(s) 553, 751, 849, 922, 923
AflIII ACRYGT 1 cut(s) 579
AgsI TTSAA 6 cut(s) 281, 436, 509, 808, 1034, 1118
AjnI CCWGG 1 cut(s) 680
AjuI GAANNNNNNNTTGG 2 cut(s) 251, 283
Alw26I GTCTC 1 cut(s) 1399
AlwI GGATC 1 cut(s) 557
AlwNI CAGNNNCTG 1 cut(s) 566
Ama87I CYCGRG 1 cut(s) 1001
AoxI GGCC 2 cut(s) 790, 954
ApeKI GCWGC 2 cut(s) 18, 159
ApoI RAATTY 3 cut(s) 948, 1029, 1236
ArsI GACNNNNNNTTYG 2 cut(s) 1020, 1052
AseI ATTAAT 1 cut(s) 1076
Asp700I GAANNNNTTC 2 cut(s) 431, 803
Asp718I GGTACC 1 cut(s) 248
AspS9I GGNCC 4 cut(s) 472, 482, 911, 980
AsuHPI GGTGA 3 cut(s) 199, 395, 404
AvaI CYCGRG 1 cut(s) 1001
AvaII GGWCC 4 cut(s) 472, 482, 911, 980
BaeGI GKGCMC 2 cut(s) 775, 1106
BaeI ACNNNNGTAYC 2 cut(s) 695, 728
BalI TGGCCA 1 cut(s) 792
BanI GGYRCC 3 cut(s) 248, 737, 772
BanII GRGCYC 1 cut(s) 548
BauI CACGAG 2 cut(s) 300, 1040
BbsI GAAGAC 1 cut(s) 47
BbvI GCAGC 2 cut(s) 5, 171
BccI CCATC 2 cut(s) 181, 1277
BcgI CGANNNNNNTGC 2 cut(s) 69, 103
BciT130I CCWGG 1 cut(s) 682
BciVI GTATCC 1 cut(s) 723
BcoDI GTCTC 1 cut(s) 1399
BfaI CTAG 4 cut(s) 264, 416, 1107, 1131
BfmI CTRYAG 1 cut(s) 558
BfuI GTATCC 1 cut(s) 723
BisI GCNGC 2 cut(s) 19, 160
BlpI GCTNAGC 1 cut(s) 1359
BlsI GCNGC 2 cut(s) 20, 161
Bme1390I CCNGG 1 cut(s) 682
Bme18I GGWCC 4 cut(s) 472, 482, 911, 980
BmeT110I CYCGRG 1 cut(s) 1001
BmgT120I GGNCC 4 cut(s) 472, 482, 911, 980
BmiI GGNNCC 8 cut(s) 250, 545, 739, 774, 854, 913, 933, 1220
BmrFI CCNGG 1 cut(s) 682
BmsI GCATC 3 cut(s) 109, 314, 1296
BpiI GAAGAC 1 cut(s) 47
Bpu1102I GCTNAGC 1 cut(s) 1359
BsaJI CCNNGG 3 cut(s) 468, 681, 1053
BsaWI WCCGGW 1 cut(s) 1165
BsaXI ACNNNNNCTCC 2 cut(s) 721, 751
Bsc4I CCNNNNNNNGG 5 cut(s) 553, 751, 849, 922, 923
Bse118I RCCGGY 1 cut(s) 1354
Bse1I ACTGG 1 cut(s) 10
Bse3DI GCAATG 1 cut(s) 838
BseBI CCWGG 1 cut(s) 682
BseDI CCNNGG 3 cut(s) 468, 681, 1053
BseLI CCNNNNNNNGG 5 cut(s) 553, 751, 849, 922, 923
BseMI GCAATG 1 cut(s) 838
BseMII CTCAG 2 cut(s) 118, 328
BseNI ACTGG 1 cut(s) 10
BseRI GAGGAG 1 cut(s) 1327
BseSI GKGCMC 2 cut(s) 775, 1106
BseXI GCAGC 2 cut(s) 5, 171
BsgI GTGCAG 1 cut(s) 9
Bsh1236I CGCG 1 cut(s) 1247
BshFI GGCC 2 cut(s) 792, 956
BshNI GGYRCC 3 cut(s) 248, 737, 772
BsiHKCI CYCGRG 1 cut(s) 1001
BsiSI CCGG 2 cut(s) 1166, 1355
BslFI GGGAC 4 cut(s) 350, 698, 897, 1095
BslI CCNNNNNNNGG 5 cut(s) 553, 751, 849, 922, 923
BsmAI GTCTC 1 cut(s) 1399
BsmBI CGTCTC 1 cut(s) 1399
BsmFI GGGAC 4 cut(s) 350, 698, 897, 1095
BsnI GGCC 2 cut(s) 792, 956
BsoBI CYCGRG 1 cut(s) 1001
Bsp1286I GDGCHC 3 cut(s) 548, 775, 1106
Bsp143I GATC 2 cut(s) 562, 661
Bsp1720I GCTNAGC 1 cut(s) 1359
Bsp68I TCGCGA 1 cut(s) 1247
BspACI CCGC 2 cut(s) 965, 1071
BspANI GGCC 2 cut(s) 792, 956
BspCNI CTCAG 2 cut(s) 117, 327
BspFNI CGCG 1 cut(s) 1247
BspLI GGNNCC 8 cut(s) 250, 545, 739, 774, 854, 913, 933, 1220
BspPI GGATC 1 cut(s) 557
BspT107I GGYRCC 3 cut(s) 248, 737, 772
BsrDI GCAATG 1 cut(s) 838
BsrFI RCCGGY 1 cut(s) 1354
BsrI ACTGG 1 cut(s) 10
BssAI RCCGGY 1 cut(s) 1354
BssECI CCNNGG 3 cut(s) 468, 681, 1053
BssMI GATC 2 cut(s) 562, 661
BssSI CACGAG 2 cut(s) 300, 1040
BssT1I CCWWGG 2 cut(s) 468, 1053
Bst2BI CACGAG 2 cut(s) 300, 1040
Bst2UI CCWGG 1 cut(s) 682
Bst4CI ACNGT 2 cut(s) 248, 659
Bst6I CTCTTC 1 cut(s) 422
BstAPI GCANNNNNTGC 2 cut(s) 1095, 1151
BstC8I GCNNGC 3 cut(s) 790, 1126, 1356
BstDEI CTNAG 4 cut(s) 104, 314, 861, 1359
BstFNI CGCG 1 cut(s) 1247
BstKTI GATC 2 cut(s) 565, 664
BstMAI GTCTC 1 cut(s) 1399
BstMBI GATC 2 cut(s) 562, 661
BstMWI GCNNNNNNNGC 5 cut(s) 18, 962, 1095, 1151, 1360
BstNI CCWGG 1 cut(s) 682
BstNSI RCATGY 1 cut(s) 583
BstSCI CCNGG 1 cut(s) 680
BstSFI CTRYAG 1 cut(s) 558
BstSLI GKGCMC 2 cut(s) 775, 1106
BstUI CGCG 1 cut(s) 1247
BstV1I GCAGC 2 cut(s) 5, 171
BstV2I GAAGAC 1 cut(s) 47
BstX2I RGATCY 1 cut(s) 562
BstYI RGATCY 1 cut(s) 562
BsuI GTATCC 1 cut(s) 723
BsuRI GGCC 2 cut(s) 792, 956
BtgZI GCGATG 1 cut(s) 1218
BtsIMutI CAGTG 1 cut(s) 1401
BtuMI TCGCGA 1 cut(s) 1247
Cac8I GCNNGC 3 cut(s) 790, 1126, 1356
CaiI CAGNNNCTG 1 cut(s) 566
Cfr10I RCCGGY 1 cut(s) 1354
Cfr13I GGNCC 4 cut(s) 472, 482, 911, 980
Csp6I GTAC 6 cut(s) 220, 249, 353, 893, 1343, 1385
CviAII CATG 6 cut(s) 217, 580, 759, 977, 1060, 1381
CviQI GTAC 6 cut(s) 220, 249, 353, 893, 1343, 1385
DdeI CTNAG 4 cut(s) 104, 314, 861, 1359
DpnI GATC 2 cut(s) 564, 663
DpnII GATC 2 cut(s) 562, 661
DraI TTTAAA 2 cut(s) 331, 1323
EaeI YGGCCR 1 cut(s) 790
Eam1104I CTCTTC 1 cut(s) 422
EarI CTCTTC 1 cut(s) 422
Eco130I CCWWGG 2 cut(s) 468, 1053
Eco24I GRGCYC 1 cut(s) 548
Eco47I GGWCC 4 cut(s) 472, 482, 911, 980
Eco57I CTGAAG 1 cut(s) 867
Eco88I CYCGRG 1 cut(s) 1001
EcoRI GAATTC 1 cut(s) 948
EcoRII CCWGG 1 cut(s) 680
EcoT14I CCWWGG 2 cut(s) 468, 1053
EcoT38I GRGCYC 1 cut(s) 548
ErhI CCWWGG 2 cut(s) 468, 1053
Esp3I CGTCTC 1 cut(s) 1399
FaeI CATG 6 cut(s) 220, 583, 762, 980, 1063, 1384
FalI AAGNNNNNCTT 4 cut(s) 1082, 1114, 1256, 1288
FaqI GGGAC 4 cut(s) 350, 698, 897, 1095
FatI CATG 6 cut(s) 216, 579, 758, 976, 1059, 1380
FauI CCCGC 1 cut(s) 958
FblI GTMKAC 1 cut(s) 667
Fnu4HI GCNGC 2 cut(s) 19, 160
FriOI GRGCYC 1 cut(s) 548
Fsp4HI GCNGC 2 cut(s) 19, 160
FspBI CTAG 4 cut(s) 264, 416, 1107, 1131
GluI GCNGC 2 cut(s) 19, 160
HaeIII GGCC 2 cut(s) 792, 956
HapII CCGG 2 cut(s) 1166, 1355
Hin1II CATG 6 cut(s) 220, 583, 762, 980, 1063, 1384
HincII GTYRAC 1 cut(s) 244
HindII GTYRAC 1 cut(s) 244
HindIII AAGCTT 4 cut(s) 10, 800, 1046, 1421
HinfI GANTC 3 cut(s) 409, 985, 1375
HpaI GTTAAC 1 cut(s) 244
HpaII CCGG 2 cut(s) 1166, 1355
HphI GGTGA 3 cut(s) 199, 395, 404
Hpy166II GTNNAC 4 cut(s) 244, 625, 668, 1039
Hpy188I TCNGA 5 cut(s) 94, 346, 847, 1180, 1332
Hpy188III TCNNGA 7 cut(s) 149, 436, 566, 764, 900, 1246, 1264
Hpy8I GTNNAC 4 cut(s) 244, 625, 668, 1039
Hpy99I CGWCG 2 cut(s) 948, 1247
HpyAV CCTTC 8 cut(s) 219, 253, 449, 503, 842, 906, 967, 1006
HpyCH4III ACNGT 2 cut(s) 248, 659
HpyCH4V TGCA 4 cut(s) 26, 831, 1154, 1309
HpyF10VI GCNNNNNNNGC 5 cut(s) 18, 962, 1095, 1151, 1360
HpyF3I CTNAG 4 cut(s) 104, 314, 861, 1359
Hsp92II CATG 6 cut(s) 220, 583, 762, 980, 1063, 1384
KpnI GGTACC 1 cut(s) 252
KroI GCCGGC 1 cut(s) 1354
KroNI GCCGGC 1 cut(s) 1356
KspAI GTTAAC 1 cut(s) 244
Kzo9I GATC 2 cut(s) 562, 661
LmnI GCTCC 6 cut(s) 218, 444, 543, 729, 937, 1218
Lsp1109I GCAGC 2 cut(s) 5, 171
LweI GCATC 3 cut(s) 109, 314, 1296
MaeI CTAG 4 cut(s) 264, 416, 1107, 1131
MaeIII GTNAC 2 cut(s) 410, 761
MalI GATC 2 cut(s) 564, 663
MboI GATC 2 cut(s) 562, 661
MboII GAAGA 4 cut(s) 47, 55, 67, 439
MflI RGATCY 1 cut(s) 562
MhlI GDGCHC 3 cut(s) 548, 775, 1106
MlsI TGGCCA 1 cut(s) 792
MluNI TGGCCA 1 cut(s) 792
MlyI GAGTC 1 cut(s) 418
MmeI TCCRAC 2 cut(s) 880, 1203
Mox20I TGGCCA 1 cut(s) 792
MroNI GCCGGC 1 cut(s) 1354
MroXI GAANNNNTTC 2 cut(s) 431, 803
MscI TGGCCA 1 cut(s) 792
MseI TTAA 7 cut(s) 243, 330, 1076, 1172, 1322, 1413, 1419
MslI CAYNNNNRTG 1 cut(s) 821
Msp20I TGGCCA 1 cut(s) 792
MspA1I CMGCKG 1 cut(s) 788
MspI CCGG 2 cut(s) 1166, 1355
MspR9I CCNGG 1 cut(s) 682
MvaI CCWGG 1 cut(s) 682
MvnI CGCG 1 cut(s) 1247
MwoI GCNNNNNNNGC 5 cut(s) 18, 962, 1095, 1151, 1360
NaeI GCCGGC 1 cut(s) 1356
NdeII GATC 2 cut(s) 562, 661
NgoMIV GCCGGC 1 cut(s) 1354
NlaIII CATG 6 cut(s) 220, 583, 762, 980, 1063, 1384
NlaIV GGNNCC 8 cut(s) 250, 545, 739, 774, 854, 913, 933, 1220
NmuCI GTSAC 2 cut(s) 410, 761
NruI TCGCGA 1 cut(s) 1247
NspI RCATGY 1 cut(s) 583
PaeR7I CTCGAG 1 cut(s) 1001
PciI ACATGT 1 cut(s) 579
PdiI GCCGGC 1 cut(s) 1356
PdmI GAANNNNTTC 2 cut(s) 431, 803
PfeI GAWTC 2 cut(s) 985, 1375
PflMI CCANNNNNTGG 1 cut(s) 751
PkrI GCNGC 2 cut(s) 20, 161
PleI GAGTC 1 cut(s) 417
PpsI GAGTC 1 cut(s) 417
PscI ACATGT 1 cut(s) 579
PshBI ATTAAT 1 cut(s) 1076
Psp6I CCWGG 1 cut(s) 680
PspGI CCWGG 1 cut(s) 680
PspN4I GGNNCC 8 cut(s) 250, 545, 739, 774, 854, 913, 933, 1220
PspPI GGNCC 4 cut(s) 472, 482, 911, 980
PspXI VCTCGAGB 1 cut(s) 1001
PstNI CAGNNNCTG 1 cut(s) 566
PsuI RGATCY 1 cut(s) 562
PvuII CAGCTG 1 cut(s) 788
RruI TCGCGA 1 cut(s) 1247
RsaI GTAC 6 cut(s) 221, 250, 354, 894, 1344, 1386
RsaNI GTAC 6 cut(s) 220, 249, 353, 893, 1343, 1385
RseI CAYNNNNRTG 1 cut(s) 821
SaqAI TTAA 7 cut(s) 243, 330, 1076, 1172, 1322, 1413, 1419
SatI GCNGC 2 cut(s) 19, 160
Sau3AI GATC 2 cut(s) 562, 661
Sau96I GGNCC 4 cut(s) 472, 482, 911, 980
SchI GAGTC 1 cut(s) 418
ScrFI CCNGG 1 cut(s) 682
SduI GDGCHC 3 cut(s) 548, 775, 1106
SfaNI GCATC 3 cut(s) 109, 314, 1296
SfcI CTRYAG 1 cut(s) 558
Sfr274I CTCGAG 1 cut(s) 1001
SinI GGWCC 4 cut(s) 472, 482, 911, 980
SlaI CTCGAG 1 cut(s) 1001
SmiMI CAYNNNNRTG 1 cut(s) 821
SmlI CTYRAG 1 cut(s) 1001
SmoI CTYRAG 1 cut(s) 1001
SsiI CCGC 2 cut(s) 965, 1071
SspI AATATT 1 cut(s) 888
SspMI CTAG 4 cut(s) 264, 416, 1107, 1131
StyD4I CCNGG 1 cut(s) 680
StyI CCWWGG 2 cut(s) 468, 1053
TaaI ACNGT 2 cut(s) 248, 659
TaqI TCGA 5 cut(s) 176, 797, 946, 988, 1002
TaqII GACCGA 2 cut(s) 899, 997
TatI WGTACW 2 cut(s) 352, 1342
TfiI GAWTC 2 cut(s) 985, 1375
Tru1I TTAA 7 cut(s) 243, 330, 1076, 1172, 1322, 1413, 1419
Tru9I TTAA 7 cut(s) 243, 330, 1076, 1172, 1322, 1413, 1419
TscAI CASTG 1 cut(s) 1401
TseFI GTSAC 2 cut(s) 410, 761
TseI GCWGC 2 cut(s) 18, 159
Tsp45I GTSAC 2 cut(s) 410, 761
TspRI CASTG 1 cut(s) 1401
Van91I CCANNNNNTGG 1 cut(s) 751
VpaK11BI GGWCC 4 cut(s) 472, 482, 911, 980
VspI ATTAAT 1 cut(s) 1076
XapI RAATTY 3 cut(s) 948, 1029, 1236
XceI RCATGY 1 cut(s) 583
XhoI CTCGAG 1 cut(s) 1001
XmiI GTMKAC 1 cut(s) 667
XmnI GAANNNNTTC 2 cut(s) 431, 803
XspI CTAG 4 cut(s) 264, 416, 1107, 1131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.