MD15G1165300.v1.1

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
12439867 .. 12441969
2103 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1165300.v1.1.491

Sequence Viewer

Length: 1560 bp
ATGGCCATGACTTCAGCTTTCCGCTGCCGCACACTTTTTTGGCTAATTATCTTCTTTTTTCTCGTTTTCTTCGTTCTAACCTTCTCACCCTTGCTTCGTGAAAACAATGTCATTATTCCCTTTGTTTCCTCTTTCAATAGTACTACTACACCTTTCAATCTGACAAAGAGCAACTGCACATCCCTACCTCAAGTTTCATATTTTGATGAGCTTCTCACAAGCTCCATGTATCAAAGGAGACACAAGGCTAATCTTACCAAAGTAAGCATTTCAATTTCATTTTTCAGGTTAATAACAGTTTCAATTTTCAAAACTTGTTTAGTAACTGTTTTCATTTTTCAAAAAGTGACCAAGCCAAATTTGGAAAATTCATCACAAAAGAGAGCTTTATGTTTTAATTATTTTGAACAAAATGATTATGAAATGACCCCCAAGTGTAATCGTTCTCATGTAGTTATTAGAATCAAAACGATGGGTAAGACTAGTTTGGATACAATTGAAGAAGGCTTGGCCAAAGCACGAGCTGCAATTCTTGAAGCAATTCAGTTTAAAAAGTATGCATCACAGAAAAATGAGACTTTTATCCCAAGAGGAACCATTTACAAAAATCCCTATGCTTTTCACCAGAGTCACGTAGAGATGATGAAGAGGTTCAAGGTGTGGAGCTACAAGGAAGGAGAGCATCCATTAATACATTTTGGTCCAGTGAATGACATATATGGAATCGAGGGACAATTCATTGATGAAATAGAGAGGGAGGAAAGCCCATTCAGGGCTACACATCCTGATGAGGCACACACATTTTTCCTTCCCTTCAGTGTTGCCAACGTTGTTCGCTATGTCTACATGCCTATCACTCGGAAGCAAGATTACCATCGCGACCGCCTGCAACGGGTTGTCACCGACAACATCAGCGTTGTGGCTGATAAATATCCCTATTGGAACAGAAGCAATGGTGCTGACCATTTTATGGCTTCATGTCATGATTGGGTACATGTTTCACTGCCTAAAATCTACTTACCCAAAGGAAATTTGGACCCACCCAATTTGGGTCAGGCCCCAAAGAGCCGCCCAATTCTAGCATTCTTTGCCGGTCGGGTTCATGGACCTGTTCGGCCCATCTTGCTGGATCATTGGAAGGACAAAGATGATGAAGTTCAAGTCTACGAGAAGCTTCCCAAGGGCCTAAACTACACCAAATTTATGGGGCAGAGCAAATTTTGCTTGTGCCCTAGTGGATTTGAAGTTGCAAGCCCAAGAATTGTGGAGGCAATCTATGCAGGGTGTGTGCCAGTCTTAATTTCTGACAATTACACTTTGCTCTTCAGTGATGTGCTTGATTGGAGCAAATTTTCAGTGCAAATTCCAGTTGATAAGATACCAGAAATTAAGACCATCTTACAAGCAATTCCATTCGACAAATATCTGAAAATGCAGAAGAGGGTGTATAGGGTTCGTAGGCATTTTGTGCTAAACAGGCCATCTAAACCGTTTGATGTAATTCACATGGTGCTTCACTCAGTATGGTTAAGAAGACTTAACTTTAAACTCGAGAATTAA

Protein Analysis

520

Amino Acids

60.53

Weight (kDa)

9.47

Isoelectric Point (pI)

42.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 200 - 330 1e-14 Exostosin GT47 domain
Exostosin_GT47 PF03016 350 - 470 8e-34 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 970
AccI GTMKAC 2 cut(s) 843, 1164
AccII CGCG 1 cut(s) 879
AciI CCGC 4 cut(s) 22, 28, 883, 1069
AclI AACGTT 1 cut(s) 828
AclWI GGATC 1 cut(s) 1137
AcoI YGGCCR 2 cut(s) 3, 510
AcsI RAATTY 7 cut(s) 358, 367, 1030, 1199, 1217, 1349, 1362
AcuI CTGAAG 2 cut(s) 799, 1309
AdeI CACNNNGTG 1 cut(s) 1510
AfaI GTAC 2 cut(s) 142, 993
AfiI CCNNNNNNNGG 4 cut(s) 772, 892, 970, 1049
AflIII ACRYGT 1 cut(s) 994
AhlI ACTAGT 1 cut(s) 482
AluBI AGCT 7 cut(s) 17, 211, 222, 386, 524, 666, 1174
AluI AGCT 7 cut(s) 17, 211, 222, 386, 524, 666, 1174
Alw26I GTCTC 2 cut(s) 232, 569
AlwI GGATC 1 cut(s) 1137
Ama87I CYCGRG 1 cut(s) 1550
AoxI GGCC 6 cut(s) 3, 510, 1056, 1115, 1183, 1478
ApeKI GCWGC 2 cut(s) 24, 524
ApoI RAATTY 7 cut(s) 358, 367, 1030, 1199, 1217, 1349, 1362
AseI ATTAAT 1 cut(s) 689
Asp700I GAANNNNTTC 2 cut(s) 540, 650
AspS9I GGNCC 6 cut(s) 701, 1036, 1057, 1106, 1116, 1183
AsuHPI GGTGA 3 cut(s) 78, 614, 892
AvaI CYCGRG 1 cut(s) 1550
AvaII GGWCC 3 cut(s) 701, 1036, 1106
BaeGI GKGCMC 1 cut(s) 1232
BalI TGGCCA 2 cut(s) 5, 512
BarI GAAGNNNNNNTAC 2 cut(s) 854, 886
BauI CACGAG 1 cut(s) 519
BbsI GAAGAC 1 cut(s) 1540
BbvI GCAGC 2 cut(s) 11, 511
BccI CCATC 5 cut(s) 466, 882, 1127, 1403, 1489
BciVI GTATCC 1 cut(s) 484
BcoDI GTCTC 2 cut(s) 232, 569
BcuI ACTAGT 1 cut(s) 482
BfaI CTAG 3 cut(s) 483, 1079, 1233
BfuI GTATCC 1 cut(s) 484
BisI GCNGC 4 cut(s) 25, 28, 525, 1069
BlsI GCNGC 4 cut(s) 26, 29, 526, 1070
BmcAI AGTACT 1 cut(s) 142
Bme18I GGWCC 3 cut(s) 701, 1036, 1106
BmeT110I CYCGRG 1 cut(s) 1550
BmgT120I GGNCC 6 cut(s) 701, 1036, 1057, 1106, 1116, 1183
BmiI GGNNCC 3 cut(s) 595, 1038, 1059
BmsI GCATC 2 cut(s) 569, 691
BpiI GAAGAC 1 cut(s) 1540
BpuEI CTTGAG 1 cut(s) 174
BsaAI YACGTR 1 cut(s) 634
BsaBI GATNNNNATC 2 cut(s) 873, 930
BsaJI CCNNGG 1 cut(s) 1179
Bsc4I CCNNNNNNNGG 4 cut(s) 772, 892, 970, 1049
Bse118I RCCGGY 1 cut(s) 1091
Bse1I ACTGG 3 cut(s) 704, 1292, 1367
Bse3DI GCAATG 1 cut(s) 958
Bse8I GATNNNNATC 2 cut(s) 873, 930
BseDI CCNNGG 1 cut(s) 1179
BseGI GGATG 3 cut(s) 179, 682, 781
BseJI GATNNNNATC 2 cut(s) 873, 930
BseLI CCNNNNNNNGG 4 cut(s) 772, 892, 970, 1049
BseMI GCAATG 1 cut(s) 958
BseMII CTCAG 1 cut(s) 1533
BseNI ACTGG 3 cut(s) 704, 1292, 1367
BseSI GKGCMC 1 cut(s) 1232
BseXI GCAGC 2 cut(s) 11, 511
BsgI GTGCAG 1 cut(s) 160
Bsh1236I CGCG 1 cut(s) 879
Bsh1285I CGRYCG 2 cut(s) 883, 1096
BshFI GGCC 6 cut(s) 5, 512, 1058, 1117, 1185, 1480
BsiEI CGRYCG 2 cut(s) 883, 1096
BsiHKCI CYCGRG 1 cut(s) 1550
BsiSI CCGG 1 cut(s) 1092
BslFI GGGAC 1 cut(s) 744
BslI CCNNNNNNNGG 4 cut(s) 772, 892, 970, 1049
BsmAI GTCTC 2 cut(s) 232, 569
BsmFI GGGAC 1 cut(s) 744
BsmI GAATGC 1 cut(s) 1082
BsnI GGCC 6 cut(s) 5, 512, 1058, 1117, 1185, 1480
BsoBI CYCGRG 1 cut(s) 1550
Bsp1286I GDGCHC 1 cut(s) 1232
Bsp143I GATC 1 cut(s) 1129
Bsp68I TCGCGA 1 cut(s) 879
BspACI CCGC 4 cut(s) 22, 28, 883, 1069
BspANI GGCC 6 cut(s) 5, 512, 1058, 1117, 1185, 1480
BspCNI CTCAG 1 cut(s) 1532
BspFNI CGCG 1 cut(s) 879
BspHI TCATGA 1 cut(s) 982
BspLI GGNNCC 3 cut(s) 595, 1038, 1059
BspPI GGATC 1 cut(s) 1137
BspQI GCTCTTC 1 cut(s) 1328
BsrDI GCAATG 1 cut(s) 958
BsrFI RCCGGY 1 cut(s) 1091
BsrI ACTGG 3 cut(s) 704, 1292, 1367
BssAI RCCGGY 1 cut(s) 1091
BssECI CCNNGG 1 cut(s) 1179
BssMI GATC 1 cut(s) 1129
BssSI CACGAG 1 cut(s) 519
BssT1I CCWWGG 1 cut(s) 1179
Bst2BI CACGAG 1 cut(s) 519
Bst4CI ACNGT 3 cut(s) 298, 328, 1491
Bst6I CTCTTC 3 cut(s) 641, 1328, 1433
BstAPI GCANNNNNTGC 5 cut(s) 524, 1088, 1221, 1277, 1468
BstBAI YACGTR 1 cut(s) 634
BstC8I GCNNGC 2 cut(s) 887, 1252
BstDEI CTNAG 1 cut(s) 1519
BstF5I GGATG 3 cut(s) 179, 682, 781
BstFNI CGCG 1 cut(s) 879
BstKTI GATC 1 cut(s) 1132
BstMAI GTCTC 2 cut(s) 232, 569
BstMBI GATC 1 cut(s) 1129
BstMCI CGRYCG 2 cut(s) 883, 1096
BstMWI GCNNNNNNNGC 7 cut(s) 524, 1088, 1123, 1221, 1277, 1468, 1477
BstNSI RCATGY 2 cut(s) 850, 998
BstSLI GKGCMC 1 cut(s) 1232
BstUI CGCG 1 cut(s) 879
BstV1I GCAGC 2 cut(s) 11, 511
BstV2I GAAGAC 1 cut(s) 1540
BstXI CCANNNNNNTGG 2 cut(s) 1126, 1204
BsuI GTATCC 1 cut(s) 484
BsuRI GGCC 6 cut(s) 5, 512, 1058, 1117, 1185, 1480
BtgZI GCGATG 1 cut(s) 860
BtsCI GGATG 3 cut(s) 179, 682, 781
BtsI GCAGTG 1 cut(s) 1001
BtsIMutI CAGTG 5 cut(s) 711, 823, 1001, 1333, 1362
BtuMI TCGCGA 1 cut(s) 879
Cac8I GCNNGC 2 cut(s) 887, 1252
CciI TCATGA 1 cut(s) 982
Cfr10I RCCGGY 1 cut(s) 1091
Cfr13I GGNCC 6 cut(s) 701, 1036, 1057, 1106, 1116, 1183
Csp6I GTAC 2 cut(s) 141, 992
CspCI CAANNNNNGTGG 4 cut(s) 1029, 1064, 1245, 1280
CviAII CATG 9 cut(s) 7, 226, 449, 847, 978, 983, 995, 1103, 1507
CviQI GTAC 2 cut(s) 141, 992
DdeI CTNAG 1 cut(s) 1519
DpnI GATC 1 cut(s) 1131
DpnII GATC 1 cut(s) 1129
DraI TTTAAA 2 cut(s) 550, 1546
DraIII CACNNNGTG 1 cut(s) 1510
EaeI YGGCCR 2 cut(s) 3, 510
Eam1104I CTCTTC 3 cut(s) 641, 1328, 1433
EarI CTCTTC 3 cut(s) 641, 1328, 1433
Eco130I CCWWGG 1 cut(s) 1179
Eco47I GGWCC 3 cut(s) 701, 1036, 1106
Eco57I CTGAAG 2 cut(s) 799, 1309
Eco88I CYCGRG 1 cut(s) 1550
EcoO109I RGGNCCY 2 cut(s) 1057, 1183
EcoT14I CCWWGG 1 cut(s) 1179
EcoT22I ATGCAT 1 cut(s) 562
ErhI CCWWGG 1 cut(s) 1179
FaeI CATG 9 cut(s) 10, 229, 452, 850, 981, 986, 998, 1106, 1510
FalI AAGNNNNNCTT 2 cut(s) 1382, 1414
FaqI GGGAC 1 cut(s) 744
FatI CATG 9 cut(s) 6, 225, 448, 846, 977, 982, 994, 1102, 1506
FblI GTMKAC 2 cut(s) 843, 1164
Fnu4HI GCNGC 4 cut(s) 25, 28, 525, 1069
FokI GGATG 3 cut(s) 166, 669, 768
Fsp4HI GCNGC 4 cut(s) 25, 28, 525, 1069
FspBI CTAG 3 cut(s) 483, 1079, 1233
GluI GCNGC 4 cut(s) 25, 28, 525, 1069
HaeIII GGCC 6 cut(s) 5, 512, 1058, 1117, 1185, 1480
HapII CCGG 1 cut(s) 1092
Hin1II CATG 9 cut(s) 10, 229, 452, 850, 981, 986, 998, 1106, 1510
HindIII AAGCTT 1 cut(s) 1172
HinfI GANTC 3 cut(s) 462, 628, 723
HpaII CCGG 1 cut(s) 1092
HphI GGTGA 3 cut(s) 78, 614, 892
Hpy166II GTNNAC 2 cut(s) 844, 1165
Hpy188I TCNGA 4 cut(s) 162, 861, 1306, 1428
Hpy188III TCNNGA 6 cut(s) 98, 533, 785, 878, 983, 1552
Hpy8I GTNNAC 2 cut(s) 844, 1165
HpyAV CCTTC 6 cut(s) 91, 497, 668, 818, 823, 1132
HpyCH4III ACNGT 3 cut(s) 298, 328, 1491
HpyCH4IV ACGT 2 cut(s) 633, 828
HpyCH4V TGCA 8 cut(s) 177, 527, 560, 889, 1250, 1280, 1360, 1435
HpyF10VI GCNNNNNNNGC 7 cut(s) 524, 1088, 1123, 1221, 1277, 1468, 1477
HpyF3I CTNAG 1 cut(s) 1519
HpySE526I ACGT 2 cut(s) 633, 828
Hsp92II CATG 9 cut(s) 10, 229, 452, 850, 981, 986, 998, 1106, 1510
Kzo9I GATC 1 cut(s) 1129
LguI GCTCTTC 1 cut(s) 1328
LmnI GCTCC 3 cut(s) 227, 663, 1344
Lsp1109I GCAGC 2 cut(s) 11, 511
LweI GCATC 2 cut(s) 569, 691
MaeI CTAG 3 cut(s) 483, 1079, 1233
MaeII ACGT 2 cut(s) 633, 828
MaeIII GTNAC 4 cut(s) 322, 346, 629, 898
MalI GATC 1 cut(s) 1131
MboI GATC 1 cut(s) 1129
MboII GAAGA 7 cut(s) 43, 61, 512, 658, 1315, 1450, 1545
MfeI CAATTG 1 cut(s) 495
MhlI GDGCHC 1 cut(s) 1232
MlsI TGGCCA 2 cut(s) 5, 512
MluNI TGGCCA 2 cut(s) 5, 512
MlyI GAGTC 1 cut(s) 637
Mox20I TGGCCA 2 cut(s) 5, 512
Mph1103I ATGCAT 1 cut(s) 562
MroXI GAANNNNTTC 2 cut(s) 540, 650
MscI TGGCCA 2 cut(s) 5, 512
MslI CAYNNNNRTG 1 cut(s) 786
Msp20I TGGCCA 2 cut(s) 5, 512
MspA1I CMGCKG 1 cut(s) 24
MspI CCGG 1 cut(s) 1092
MunI CAATTG 1 cut(s) 495
Mva1269I GAATGC 1 cut(s) 1082
MvnI CGCG 1 cut(s) 879
MwoI GCNNNNNNNGC 7 cut(s) 524, 1088, 1123, 1221, 1277, 1468, 1477
NdeII GATC 1 cut(s) 1129
NlaIII CATG 9 cut(s) 10, 229, 452, 850, 981, 986, 998, 1106, 1510
NlaIV GGNNCC 3 cut(s) 595, 1038, 1059
NmuCI GTSAC 3 cut(s) 346, 629, 898
NruI TCGCGA 1 cut(s) 879
NsiI ATGCAT 1 cut(s) 562
NspI RCATGY 2 cut(s) 850, 998
PaeR7I CTCGAG 1 cut(s) 1550
PagI TCATGA 1 cut(s) 982
PciI ACATGT 1 cut(s) 994
PciSI GCTCTTC 1 cut(s) 1328
PcsI WCGNNNNNNNCGW 1 cut(s) 69
PctI GAATGC 1 cut(s) 1082
PdmI GAANNNNTTC 2 cut(s) 540, 650
PfeI GAWTC 2 cut(s) 462, 723
PflMI CCANNNNNTGG 1 cut(s) 970
PkrI GCNGC 4 cut(s) 26, 29, 526, 1070
PleI GAGTC 1 cut(s) 636
PpsI GAGTC 1 cut(s) 636
Ppu21I YACGTR 1 cut(s) 634
PscI ACATGT 1 cut(s) 994
PshBI ATTAAT 1 cut(s) 689
Psp1406I AACGTT 1 cut(s) 828
PspN4I GGNNCC 3 cut(s) 595, 1038, 1059
PspPI GGNCC 6 cut(s) 701, 1036, 1057, 1106, 1116, 1183
RruI TCGCGA 1 cut(s) 879
RsaI GTAC 2 cut(s) 142, 993
RsaNI GTAC 2 cut(s) 141, 992
RseI CAYNNNNRTG 1 cut(s) 786
SapI GCTCTTC 1 cut(s) 1328
SatI GCNGC 4 cut(s) 25, 28, 525, 1069
Sau3AI GATC 1 cut(s) 1129
Sau96I GGNCC 6 cut(s) 701, 1036, 1057, 1106, 1116, 1183
ScaI AGTACT 1 cut(s) 142
SchI GAGTC 1 cut(s) 637
SduI GDGCHC 1 cut(s) 1232
SfaNI GCATC 2 cut(s) 569, 691
Sfr274I CTCGAG 1 cut(s) 1550
SinI GGWCC 3 cut(s) 701, 1036, 1106
SlaI CTCGAG 1 cut(s) 1550
SmiMI CAYNNNNRTG 1 cut(s) 786
SmlI CTYRAG 2 cut(s) 189, 1550
SmoI CTYRAG 2 cut(s) 189, 1550
SpeI ACTAGT 1 cut(s) 482
SsiI CCGC 4 cut(s) 22, 28, 883, 1069
SspMI CTAG 3 cut(s) 483, 1079, 1233
StyI CCWWGG 1 cut(s) 1179
TaaI ACNGT 3 cut(s) 298, 328, 1491
TaiI ACGT 2 cut(s) 636, 831
TaqI TCGA 3 cut(s) 726, 1416, 1551
TatI WGTACW 1 cut(s) 140
TauI GCSGC 2 cut(s) 30, 1071
TfiI GAWTC 2 cut(s) 462, 723
TscAI CASTG 5 cut(s) 711, 823, 1008, 1333, 1362
TseFI GTSAC 3 cut(s) 346, 629, 898
TseI GCWGC 2 cut(s) 24, 524
Tsp45I GTSAC 3 cut(s) 346, 629, 898
TspRI CASTG 5 cut(s) 711, 823, 1008, 1333, 1362
Van91I CCANNNNNTGG 1 cut(s) 970
VpaK11BI GGWCC 3 cut(s) 701, 1036, 1106
VspI ATTAAT 1 cut(s) 689
XapI RAATTY 7 cut(s) 358, 367, 1030, 1199, 1217, 1349, 1362
XceI RCATGY 2 cut(s) 850, 998
XcmI CCANNNNNNNNNTGG 2 cut(s) 358, 1030
XhoI CTCGAG 1 cut(s) 1550
XmiI GTMKAC 2 cut(s) 843, 1164
XmnI GAANNNNTTC 2 cut(s) 540, 650
XspI CTAG 3 cut(s) 483, 1079, 1233
ZrmI AGTACT 1 cut(s) 142
Zsp2I ATGCAT 1 cut(s) 562
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.