Prupe.6G359600_v2.0.a1

Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000987
Physical Location & Seq
Forward (+)
30387324 .. 30390295
2972 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G359600.2

Sequence Viewer

Length: 1413 bp
ATGGCAGCCTTTGAATTCCGGTCACCCTATTTACTCTCTGTAATTTTTCTCCTCCTCATCCTCCTCCTTCTGGTTCTTATTCCATTCTCTCCCTTCAACCAAAACCATTTCAATCTTATAAGCCTTTCTTCTTCTTCATCTTCTACTCCTCGTCAAAGCAACCAAACAAGCCAATATCAATATGTCTCACCTGCACCCTCTCCTTCTACTTCCATTGTTGCAGACCATGTCAAAAAAAAGAAGAGCAGTGGAATCACGATTGAAGAAGAGTTGGCGAGAGCGAGAGCAGCGATCCGCAAAGCCATTCGTACGAACAAGTATACATCTGATAGACAAGAGATTTACATCCCCAGAGGAAGTGTGTACAGAAATCCCTATGCATTTCATCAGAGCCACATAGAGATGGTGAAAAGATTCAAGATATGGGCTTACAAGGAAGGAGAGATACCCATCTTCCATAACGGGCCCATGTCCTACATCTACTCCATTGAAGGTCACTTCATCGATGAGTTGGACACCAGTGGAAATTCCCCATTTTTGGCCCGCCATCATCATGAGGCACATTCCTTCTTTGTCCCTGTAAGCGTCAAAAGGGTTGCTGATTTCTTGTATGATCGCCCTAAACCATACACATTTCACGGTCGACTGGTTCGTATTGTCACCGACTACATCAATGTTGTGGCCCACAAGTACCCTTACTGGAATAGGAGCAATGGAGCTGACCACTTTATGCTCTCTTGTCATGATTGGGCACCAGAAATCATAGATGATGACCATGAGTTCTACAAGAACTTCATAAGAGTACTCTGCAATTCTAACACCTCAGAAGGATTCCAGCCCGGGAGAGACGTCTCACTACCAGAATATAACATACCGGAGAACACTCTTGGCCCGTCGCTCCTCCACCAACACCCCGATAACCGGCCTATCCTGGCCTTCTTCGCCGGTGGTGCTCATGGAGACATAAGGAAGTTTTTGTTTGAGCATTGGAAGGACAAAGATGATGAAATCCAAGTCCACGAGTATCTCCCAAAAGGGCAAAATTACCACCAAATAATGGGACAGACCAAGTTTTGCTTGTGCCCAAGTGGGACTGAAGTTGCTAGTCCGAGAGTGGTTGAGGCCATGTATGCAGGGTGTGTCCCTGTGCTCATTTCTGACTACTATTCATTGCCCTTCGCTGATGTTCTCGACTGGAGCAAGTTTACAATAGAAATTCCACCAAAGAGAATACCCGAGATCAAGGCGATATTGAAAGCTGTTCCACACTCAGAATACTTGAAATTGCAAAAGAGGGTGATGCAGGTGAGAAGGCATTTCATGCTCAACCGACCAGCTAAGCCATTTGATGTATTTCATATGGTGCTTCACTCCATATGGCTAAGGAGGCTTAACATCAGGCTACCCAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exostosin

Protein Analysis

471

Amino Acids

54.46

Weight (kDa)

9.01

Isoelectric Point (pI)

52.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 119
AarI CACCTGC 2 cut(s) 199, 1294
AatII GACGTC 1 cut(s) 852
Acc36I ACCTGC 2 cut(s) 199, 1294
AccB1I GGYRCC 1 cut(s) 751
AccB7I CCANNNNNTGG 1 cut(s) 1057
AccI GTMKAC 2 cut(s) 320, 643
AciI CCGC 2 cut(s) 295, 544
AclWI GGATC 1 cut(s) 286
AcsI RAATTY 3 cut(s) 14, 526, 1215
AcuI CTGAAG 1 cut(s) 1116
AcyI GRCGYC 1 cut(s) 849
AfaI GTAC 4 cut(s) 310, 365, 692, 804
AfiI CCNNNNNNNGG 4 cut(s) 70, 538, 921, 1057
AgsI TTSAA 8 cut(s) 14, 97, 112, 263, 418, 491, 1255, 1282
AjnI CCWGG 1 cut(s) 930
AluBI AGCT 3 cut(s) 719, 1259, 1337
AluI AGCT 3 cut(s) 719, 1259, 1337
Alw21I GWGCWC 2 cut(s) 955, 1152
Alw26I GTCTC 4 cut(s) 190, 840, 856, 954
AlwI GGATC 1 cut(s) 286
Ama87I CYCGRG 2 cut(s) 839, 1235
AoxI GGCC 7 cut(s) 464, 540, 681, 889, 923, 933, 1122
ApaI GGGCCC 1 cut(s) 468
ApeKI GCWGC 2 cut(s) 5, 287
ApoI RAATTY 3 cut(s) 14, 526, 1215
Asp700I GAANNNNTTC 1 cut(s) 413
AspS9I GGNCC 5 cut(s) 464, 465, 541, 682, 890
AsuC2I CCSGG 2 cut(s) 840, 841
AsuHPI GGTGA 6 cut(s) 15, 180, 418, 652, 1309, 1318
AvaI CYCGRG 2 cut(s) 839, 1235
BaeGI GKGCMC 3 cut(s) 468, 754, 1085
BanI GGYRCC 1 cut(s) 751
BanII GRGCYC 1 cut(s) 468
BarI GAAGNNNNNNTAC 2 cut(s) 429, 461
BauI CACGAG 1 cut(s) 1019
Bbv12I GWGCWC 2 cut(s) 955, 1152
BbvI GCAGC 2 cut(s) 17, 299
BccI CCATC 3 cut(s) 397, 458, 555
BciT130I CCWGG 1 cut(s) 932
BcnI CCSGG 2 cut(s) 840, 841
BcoDI GTCTC 4 cut(s) 190, 840, 856, 954
BfaI CTAG 1 cut(s) 1104
BfuAI ACCTGC 2 cut(s) 199, 1294
BisI GCNGC 2 cut(s) 6, 288
BlpI GCTNAGC 1 cut(s) 1338
BlsI GCNGC 2 cut(s) 7, 289
BmcAI AGTACT 1 cut(s) 804
Bme1390I CCNGG 3 cut(s) 840, 841, 932
BmeT110I CYCGRG 2 cut(s) 839, 1235
BmgT120I GGNCC 5 cut(s) 464, 465, 541, 682, 890
BmiI GGNNCC 2 cut(s) 466, 753
BmrFI CCNGG 3 cut(s) 840, 841, 932
BmsI GCATC 1 cut(s) 1290
BpmI CTGGAG 1 cut(s) 1216
Bpu10I CCTNAGC 1 cut(s) 1382
Bpu1102I GCTNAGC 1 cut(s) 1338
BpuMI CCSGG 2 cut(s) 840, 841
Bsa29I ATCGAT 1 cut(s) 504
BsaBI GATNNNNATC 2 cut(s) 344, 449
BsaHI GRCGYC 1 cut(s) 849
BsaJI CCNNGG 1 cut(s) 839
BsaWI WCCGGW 2 cut(s) 18, 874
BsaXI ACNNNNNCTCC 2 cut(s) 467, 497
Bsc4I CCNNNNNNNGG 4 cut(s) 70, 538, 921, 1057
Bse118I RCCGGY 2 cut(s) 921, 944
Bse1I ACTGG 4 cut(s) 519, 651, 704, 1199
Bse3DI GCAATG 2 cut(s) 718, 1169
Bse8I GATNNNNATC 2 cut(s) 344, 449
BseBI CCWGG 1 cut(s) 932
BseCI ATCGAT 1 cut(s) 504
BseDI CCNNGG 1 cut(s) 839
BseGI GGATG 2 cut(s) 57, 345
BseJI GATNNNNATC 2 cut(s) 344, 449
BseLI CCNNNNNNNGG 4 cut(s) 70, 538, 921, 1057
BseMI GCAATG 2 cut(s) 718, 1169
BseMII CTCAG 2 cut(s) 837, 1284
BseNI ACTGG 4 cut(s) 519, 651, 704, 1199
BseRI GAGGAG 5 cut(s) 41, 44, 53, 138, 890
BseSI GKGCMC 3 cut(s) 468, 754, 1085
BseXI GCAGC 2 cut(s) 17, 299
BsgI GTGCAG 1 cut(s) 177
Bsh1285I CGRYCG 1 cut(s) 643
BshFI GGCC 7 cut(s) 466, 542, 683, 891, 925, 935, 1124
BshNI GGYRCC 1 cut(s) 751
BshVI ATCGAT 1 cut(s) 504
BsiEI CGRYCG 1 cut(s) 643
BsiHKAI GWGCWC 2 cut(s) 955, 1152
BsiHKCI CYCGRG 2 cut(s) 839, 1235
BsiSI CCGG 5 cut(s) 19, 840, 875, 922, 945
BsiWI CGTACG 1 cut(s) 308
BslFI GGGAC 4 cut(s) 560, 1074, 1105, 1127
BslI CCNNNNNNNGG 4 cut(s) 70, 538, 921, 1057
BsmAI GTCTC 4 cut(s) 190, 840, 856, 954
BsmBI CGTCTC 2 cut(s) 840, 856
BsmFI GGGAC 4 cut(s) 560, 1074, 1105, 1127
BsnI GGCC 7 cut(s) 466, 542, 683, 891, 925, 935, 1124
BsoBI CYCGRG 2 cut(s) 839, 1235
Bsp120I GGGCCC 1 cut(s) 464
Bsp1286I GDGCHC 5 cut(s) 468, 754, 955, 1085, 1152
Bsp1407I TGTACA 1 cut(s) 363
Bsp143I GATC 3 cut(s) 291, 613, 1239
Bsp1720I GCTNAGC 1 cut(s) 1338
BspACI CCGC 2 cut(s) 295, 544
BspANI GGCC 7 cut(s) 466, 542, 683, 891, 925, 935, 1124
BspCNI CTCAG 2 cut(s) 836, 1283
BspDI ATCGAT 1 cut(s) 504
BspHI TCATGA 2 cut(s) 553, 742
BspLI GGNNCC 2 cut(s) 466, 753
BspMI ACCTGC 2 cut(s) 199, 1294
BspPI GGATC 1 cut(s) 286
BspQI GCTCTTC 1 cut(s) 236
BspT107I GGYRCC 1 cut(s) 751
BsrDI GCAATG 2 cut(s) 718, 1169
BsrFI RCCGGY 2 cut(s) 921, 944
BsrGI TGTACA 1 cut(s) 363
BsrI ACTGG 4 cut(s) 519, 651, 704, 1199
BssAI RCCGGY 2 cut(s) 921, 944
BssECI CCNNGG 1 cut(s) 839
BssMI GATC 3 cut(s) 291, 613, 1239
BssNAI GTATAC 1 cut(s) 321
BssNI GRCGYC 1 cut(s) 849
BssSI CACGAG 1 cut(s) 1019
Bst1107I GTATAC 1 cut(s) 321
Bst2BI CACGAG 1 cut(s) 1019
Bst2UI CCWGG 1 cut(s) 932
Bst4CI ACNGT 1 cut(s) 641
Bst6I CTCTTC 2 cut(s) 236, 261
BstACI GRCGYC 1 cut(s) 849
BstAPI GCANNNNNTGC 1 cut(s) 1321
BstAUI TGTACA 1 cut(s) 363
BstC8I GCNNGC 1 cut(s) 544
BstDEI CTNAG 4 cut(s) 823, 1270, 1338, 1382
BstEII GGTNACC 1 cut(s) 21
BstF5I GGATG 2 cut(s) 57, 345
BstKTI GATC 3 cut(s) 294, 616, 1242
BstMAI GTCTC 4 cut(s) 190, 840, 856, 954
BstMBI GATC 3 cut(s) 291, 613, 1239
BstMCI CGRYCG 1 cut(s) 643
BstMWI GCNNNNNNNGC 6 cut(s) 287, 941, 950, 1130, 1321, 1387
BstNI CCWGG 1 cut(s) 932
BstPI GGTNACC 1 cut(s) 21
BstSCI CCNGG 3 cut(s) 838, 839, 930
BstSLI GKGCMC 3 cut(s) 468, 754, 1085
BstV1I GCAGC 2 cut(s) 17, 299
BstZ17I GTATAC 1 cut(s) 321
Bsu15I ATCGAT 1 cut(s) 504
BsuRI GGCC 7 cut(s) 466, 542, 683, 891, 925, 935, 1124
BsuTUI ATCGAT 1 cut(s) 504
BtsCI GGATG 2 cut(s) 57, 345
BtsI GCAGTG 1 cut(s) 253
BtsIMutI CAGTG 2 cut(s) 253, 526
BveI ACCTGC 2 cut(s) 199, 1294
Cac8I GCNNGC 1 cut(s) 544
CciI TCATGA 2 cut(s) 553, 742
Cfr10I RCCGGY 2 cut(s) 921, 944
Cfr13I GGNCC 5 cut(s) 464, 465, 541, 682, 890
Cfr9I CCCGGG 1 cut(s) 839
ClaI ATCGAT 1 cut(s) 504
CseI GACGC 1 cut(s) 574
Csp6I GTAC 4 cut(s) 309, 364, 691, 803
CviAII CATG 8 cut(s) 227, 469, 554, 743, 776, 956, 1126, 1321
CviQI GTAC 4 cut(s) 309, 364, 691, 803
DdeI CTNAG 4 cut(s) 823, 1270, 1338, 1382
DpnI GATC 3 cut(s) 293, 615, 1241
DpnII GATC 3 cut(s) 291, 613, 1239
Eam1104I CTCTTC 2 cut(s) 236, 261
EarI CTCTTC 2 cut(s) 236, 261
Eco24I GRGCYC 1 cut(s) 468
Eco57I CTGAAG 1 cut(s) 1116
Eco88I CYCGRG 2 cut(s) 839, 1235
Eco91I GGTNACC 1 cut(s) 21
EcoO65I GGTNACC 1 cut(s) 21
EcoRI GAATTC 1 cut(s) 14
EcoRII CCWGG 1 cut(s) 930
EcoT22I ATGCAT 1 cut(s) 382
EcoT38I GRGCYC 1 cut(s) 468
Esp3I CGTCTC 2 cut(s) 840, 856
FaeI CATG 8 cut(s) 230, 472, 557, 746, 779, 959, 1129, 1324
FalI AAGNNNNNCTT 4 cut(s) 112, 144, 1061, 1093
FaqI GGGAC 4 cut(s) 560, 1074, 1105, 1127
FatI CATG 8 cut(s) 226, 468, 553, 742, 775, 955, 1125, 1320
FauI CCCGC 1 cut(s) 551
FauNDI CATATG 2 cut(s) 1359, 1376
FblI GTMKAC 2 cut(s) 320, 643
Fnu4HI GCNGC 2 cut(s) 6, 288
FokI GGATG 2 cut(s) 44, 332
FriOI GRGCYC 1 cut(s) 468
Fsp4HI GCNGC 2 cut(s) 6, 288
FspBI CTAG 1 cut(s) 1104
GluI GCNGC 2 cut(s) 6, 288
GsuI CTGGAG 1 cut(s) 1216
HaeIII GGCC 7 cut(s) 466, 542, 683, 891, 925, 935, 1124
HapII CCGG 5 cut(s) 19, 840, 875, 922, 945
HgaI GACGC 1 cut(s) 574
Hin1I GRCGYC 1 cut(s) 849
Hin1II CATG 8 cut(s) 230, 472, 557, 746, 779, 959, 1129, 1324
HincII GTYRAC 1 cut(s) 644
HindII GTYRAC 1 cut(s) 644
HinfI GANTC 3 cut(s) 252, 414, 831
HpaII CCGG 5 cut(s) 19, 840, 875, 922, 945
HphI GGTGA 6 cut(s) 15, 180, 418, 652, 1309, 1318
Hpy166II GTNNAC 5 cut(s) 321, 364, 644, 1018, 1206
Hpy188I TCNGA 6 cut(s) 328, 390, 826, 1110, 1159, 1273
Hpy188III TCNNGA 5 cut(s) 256, 418, 554, 743, 1190
Hpy8I GTNNAC 5 cut(s) 321, 364, 644, 1018, 1206
Hpy99I CGWCG 1 cut(s) 898
HpyCH4III ACNGT 1 cut(s) 641
HpyCH4IV ACGT 1 cut(s) 849
HpyCH4V TGCA 7 cut(s) 194, 221, 380, 810, 1133, 1288, 1303
HpyF10VI GCNNNNNNNGC 6 cut(s) 287, 941, 950, 1130, 1321, 1387
HpyF3I CTNAG 4 cut(s) 823, 1270, 1338, 1382
HpySE526I ACGT 1 cut(s) 849
Hsp92I GRCGYC 1 cut(s) 849
Hsp92II CATG 8 cut(s) 230, 472, 557, 746, 779, 959, 1129, 1324
Kzo9I GATC 3 cut(s) 291, 613, 1239
LguI GCTCTTC 1 cut(s) 236
LmnI GCTCC 4 cut(s) 708, 716, 903, 1197
Lsp1109I GCAGC 2 cut(s) 17, 299
LweI GCATC 1 cut(s) 1290
MaeI CTAG 1 cut(s) 1104
MaeII ACGT 1 cut(s) 849
MaeIII GTNAC 3 cut(s) 21, 494, 658
MalI GATC 3 cut(s) 293, 615, 1241
MboI GATC 3 cut(s) 291, 613, 1239
MboII GAAGA 9 cut(s) 120, 123, 126, 132, 253, 275, 278, 445, 931
MhlI GDGCHC 5 cut(s) 468, 754, 955, 1085, 1152
MluCI AATT 8 cut(s) 14, 42, 526, 811, 1042, 1215, 1283, 1408
MmeI TCCRAC 1 cut(s) 492
Mph1103I ATGCAT 1 cut(s) 382
MroXI GAANNNNTTC 1 cut(s) 413
MseI TTAA 2 cut(s) 1392, 1411
MslI CAYNNNNRTG 2 cut(s) 401, 552
MspI CCGG 5 cut(s) 19, 840, 875, 922, 945
MspR9I CCNGG 3 cut(s) 840, 841, 932
MvaI CCWGG 1 cut(s) 932
MwoI GCNNNNNNNGC 6 cut(s) 287, 941, 950, 1130, 1321, 1387
NciI CCSGG 2 cut(s) 840, 841
NdeI CATATG 2 cut(s) 1359, 1376
NdeII GATC 3 cut(s) 291, 613, 1239
NlaIII CATG 8 cut(s) 230, 472, 557, 746, 779, 959, 1129, 1324
NlaIV GGNNCC 2 cut(s) 466, 753
NmuCI GTSAC 3 cut(s) 21, 494, 658
NsiI ATGCAT 1 cut(s) 382
PagI TCATGA 2 cut(s) 553, 742
PaqCI CACCTGC 2 cut(s) 199, 1294
PciSI GCTCTTC 1 cut(s) 236
PcsI WCGNNNNNNNCGW 1 cut(s) 649
PdmI GAANNNNTTC 1 cut(s) 413
PfeI GAWTC 3 cut(s) 252, 414, 831
Pfl23II CGTACG 1 cut(s) 308
PflFI GACNNNGTC 1 cut(s) 227
PflMI CCANNNNNTGG 1 cut(s) 1057
PkrI GCNGC 2 cut(s) 7, 289
PsiI TTATAA 1 cut(s) 119
Psp6I CCWGG 1 cut(s) 930
PspEI GGTNACC 1 cut(s) 21
PspGI CCWGG 1 cut(s) 930
PspLI CGTACG 1 cut(s) 308
PspN4I GGNNCC 2 cut(s) 466, 753
PspOMI GGGCCC 1 cut(s) 464
PspPI GGNCC 5 cut(s) 464, 465, 541, 682, 890
PsyI GACNNNGTC 1 cut(s) 227
RsaI GTAC 4 cut(s) 310, 365, 692, 804
RsaNI GTAC 4 cut(s) 309, 364, 691, 803
RseI CAYNNNNRTG 2 cut(s) 401, 552
SalI GTCGAC 1 cut(s) 642
SapI GCTCTTC 1 cut(s) 236
SaqAI TTAA 2 cut(s) 1392, 1411
SatI GCNGC 2 cut(s) 6, 288
Sau3AI GATC 3 cut(s) 291, 613, 1239
Sau96I GGNCC 5 cut(s) 464, 465, 541, 682, 890
ScaI AGTACT 1 cut(s) 804
ScrFI CCNGG 3 cut(s) 840, 841, 932
SduI GDGCHC 5 cut(s) 468, 754, 955, 1085, 1152
SetI ASST 8 cut(s) 193, 496, 721, 824, 852, 1261, 1308, 1339
SfaNI GCATC 1 cut(s) 1290
SgrAI CRCCGGYG 1 cut(s) 944
SmaI CCCGGG 1 cut(s) 841
SmiMI CAYNNNNRTG 2 cut(s) 401, 552
Sse9I AATT 8 cut(s) 14, 42, 526, 811, 1042, 1215, 1283, 1408
SsiI CCGC 2 cut(s) 295, 544
SspMI CTAG 1 cut(s) 1104
StyD4I CCNGG 3 cut(s) 838, 839, 930
TaaI ACNGT 1 cut(s) 641
TaiI ACGT 1 cut(s) 852
TaqI TCGA 3 cut(s) 504, 643, 1191
TasI AATT 8 cut(s) 14, 42, 526, 811, 1042, 1215, 1283, 1408
TatI WGTACW 2 cut(s) 363, 802
TfiI GAWTC 3 cut(s) 252, 414, 831
Tru1I TTAA 2 cut(s) 1392, 1411
Tru9I TTAA 2 cut(s) 1392, 1411
TscAI CASTG 2 cut(s) 253, 526
TseFI GTSAC 3 cut(s) 21, 494, 658
TseI GCWGC 2 cut(s) 5, 287
Tsp45I GTSAC 3 cut(s) 21, 494, 658
TspDTI ATGAA 8 cut(s) 126, 374, 490, 784, 1020, 1158, 1309, 1346
TspMI CCCGGG 1 cut(s) 839
TspRI CASTG 2 cut(s) 253, 526
Tth111I GACNNNGTC 1 cut(s) 227
Van91I CCANNNNNTGG 1 cut(s) 1057
XapI RAATTY 3 cut(s) 14, 526, 1215
XmaI CCCGGG 1 cut(s) 839
XmiI GTMKAC 2 cut(s) 320, 643
XmnI GAANNNNTTC 1 cut(s) 413
XspI CTAG 1 cut(s) 1104
ZraI GACGTC 1 cut(s) 850
ZrmI AGTACT 1 cut(s) 804
Zsp2I ATGCAT 1 cut(s) 382
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.