Rmu_sc0002299.1_g000012

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002299.1
Physical Location & Seq
Forward (+)
63146 .. 65172
2027 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002299.1_g000012.1.cds

Sequence Viewer

Length: 1113 bp
atgcttcggtggcagcaggctggaacgcagggctgcagggaggtggaagcaggggctgctgtgcaaggttgcaaatgcacgggcgcgcgggctgcagcgaagggtcggctagctcgggctaggggctgctttgtgaatgagttttggttttctgttttgtggttagagtcgatatatggcattgaaggacaattcatagatgaaatagtgaaggaggagagcccattcagggctacacatcctgatgaggcacccatttttttccttccctttagtgtagccaacattgtgcactatgtgtaccggcctgtcattcgaaaagagaactacctccgtgatcgcctacaacggattgccatggactacataggtgttgtggcacataagtacccctactggaatagaagcaatggtgctgaccattttatggcttcatgtcatgactggggaccgcagatttcacttggtcaatcggagctcttgaagaacttcattagagtactttgcaatgccaacacctcagaagggtttgaacctaaaagagacgtttcattacctgaagtttttgtaccttctggaaagctaggcccgcccaattttggtcaagccccacacaatcgccggattctggccttctttgccggaggtcttcatggaccgattcgacctatcttgctccatcattggaaggacaaagataacgaagttcaagtccacgagacgcctcccggaggcatgaactacacggcattaatggaacagagcaagttttgcttgtgccctagaggttttgaagtggcaagtctaagagtagtggaggcaatttatgcagggtgtgttccaatgataatttctgaccactacacactaccctttagcgatgtcctcaattggagccaattttcattacaaattaccgtcgcaaaaataccagaaatcaagaccatcttacaagcgattccagatgaggagtaccaaaagatgcagagaagggttttaaaagttcagaggcattttgtactcaacaggccggctaagccatttgatgtgattcacatgatatttcactcagtgtggctgagacgaattgactttaagattggctctacttga

Protein Analysis

370

Amino Acids

42.24

Weight (kDa)

8.9

Isoelectric Point (pI)

48.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 250
AccB7I CCANNNNNTGG 1 cut(s) 427
AccII CGCG 2 cut(s) 86, 88
AciI CCGC 3 cut(s) 88, 452, 590
AcuI CTGAAG 1 cut(s) 579
AcyI GRCGYC 1 cut(s) 722
AdeI CACNNNGTG 2 cut(s) 298, 1072
AfaI GTAC 6 cut(s) 302, 389, 501, 570, 974, 1020
AfiI CCNNNNNNNGG 6 cut(s) 229, 427, 525, 599, 628, 731
AgsI TTSAA 5 cut(s) 185, 484, 533, 710, 794
AjuI GAANNNNNNNTTGG 2 cut(s) 835, 867
AluBI AGCT 3 cut(s) 113, 478, 583
AluI AGCT 3 cut(s) 113, 478, 583
Alw21I GWGCWC 2 cut(s) 294, 480
Alw26I GTCTC 3 cut(s) 537, 713, 1075
Alw44I GTGCAC 1 cut(s) 290
AlwNI CAGNNNCTG 1 cut(s) 56
Ama87I CYCGRG 1 cut(s) 114
AoxI GGCC 4 cut(s) 305, 586, 630, 1028
ApaLI GTGCAC 1 cut(s) 290
ApeKI GCWGC 6 cut(s) 13, 33, 56, 92, 95, 126
ArsI GACNNNNNNTTYG 2 cut(s) 696, 728
AseI ATTAAT 1 cut(s) 752
Asp700I GAANNNNTTC 1 cut(s) 488
AspLEI GCGC 2 cut(s) 86, 88
AspS9I GGNCC 3 cut(s) 449, 587, 656
AsuC2I CCSGG 1 cut(s) 729
AsuII TTCGAA 1 cut(s) 316
AsuNHI GCTAGC 1 cut(s) 109
AvaI CYCGRG 1 cut(s) 114
AvaII GGWCC 2 cut(s) 449, 656
BaeGI GKGCMC 2 cut(s) 294, 782
BaeI ACNNNNGTAYC 2 cut(s) 371, 404
BanI GGYRCC 1 cut(s) 250
BanII GRGCYC 2 cut(s) 224, 480
BarI GAAGNNNNNNTAC 2 cut(s) 552, 584
BauI CACGAG 1 cut(s) 716
BbsI GAAGAC 1 cut(s) 641
Bbv12I GWGCWC 2 cut(s) 294, 480
BbvI GCAGC 6 cut(s) 20, 25, 43, 79, 107, 113
BccI CCATC 2 cut(s) 687, 953
BceAI ACGGC 1 cut(s) 762
BcnI CCSGG 1 cut(s) 729
BcoDI GTCTC 3 cut(s) 537, 713, 1075
BfaI CTAG 4 cut(s) 110, 120, 584, 783
BfmI CTRYAG 2 cut(s) 34, 93
BisI GCNGC 6 cut(s) 14, 34, 57, 93, 96, 127
BlpI GCTNAGC 1 cut(s) 1035
BlsI GCNGC 6 cut(s) 15, 35, 58, 94, 97, 128
BmcAI AGTACT 1 cut(s) 501
Bme1390I CCNGG 1 cut(s) 729
Bme18I GGWCC 2 cut(s) 449, 656
BmeT110I CYCGRG 1 cut(s) 114
BmgT120I GGNCC 3 cut(s) 449, 587, 656
BmiI GGNNCC 3 cut(s) 252, 450, 896
BmrFI CCNGG 1 cut(s) 729
BmrI ACTGGG 1 cut(s) 454
BmsI GCATC 1 cut(s) 972
BmtI GCTAGC 1 cut(s) 113
BmuI ACTGGG 1 cut(s) 454
BpiI GAAGAC 1 cut(s) 641
Bpu1102I GCTNAGC 1 cut(s) 1035
Bpu14I TTCGAA 1 cut(s) 316
BpuMI CCSGG 1 cut(s) 729
BsaHI GRCGYC 1 cut(s) 722
BsaJI CCNNGG 1 cut(s) 357
Bsc4I CCNNNNNNNGG 6 cut(s) 229, 427, 525, 599, 628, 731
Bse118I RCCGGY 2 cut(s) 303, 1030
Bse1I ACTGG 2 cut(s) 401, 449
Bse3DI GCAATG 2 cut(s) 415, 514
BseDI CCNNGG 1 cut(s) 357
BseGI GGATG 1 cut(s) 238
BseLI CCNNNNNNNGG 6 cut(s) 229, 427, 525, 599, 628, 731
BseMI GCAATG 2 cut(s) 415, 514
BseMII CTCAG 3 cut(s) 534, 1070, 1083
BseNI ACTGG 2 cut(s) 401, 449
BsePI GCGCGC 1 cut(s) 84
BseRI GAGGAG 2 cut(s) 230, 983
BseSI GKGCMC 2 cut(s) 294, 782
BseXI GCAGC 6 cut(s) 20, 25, 43, 79, 107, 113
Bsh1236I CGCG 2 cut(s) 86, 88
BshFI GGCC 4 cut(s) 307, 588, 632, 1030
BshNI GGYRCC 1 cut(s) 250
BsiHKAI GWGCWC 2 cut(s) 294, 480
BsiHKCI CYCGRG 1 cut(s) 114
BsiSI CCGG 5 cut(s) 304, 622, 642, 729, 1031
BslFI GGGAC 1 cut(s) 462
BslI CCNNNNNNNGG 6 cut(s) 229, 427, 525, 599, 628, 731
BsmAI GTCTC 3 cut(s) 537, 713, 1075
BsmBI CGTCTC 3 cut(s) 537, 713, 1075
BsmFI GGGAC 1 cut(s) 462
BsnI GGCC 4 cut(s) 307, 588, 632, 1030
BsoBI CYCGRG 1 cut(s) 114
Bsp119I TTCGAA 1 cut(s) 316
Bsp1286I GDGCHC 4 cut(s) 224, 294, 480, 782
Bsp143I GATC 1 cut(s) 337
Bsp1720I GCTNAGC 1 cut(s) 1035
Bsp19I CCATGG 1 cut(s) 357
BspACI CCGC 3 cut(s) 88, 452, 590
BspANI GGCC 4 cut(s) 307, 588, 632, 1030
BspCNI CTCAG 3 cut(s) 533, 1071, 1082
BspFNI CGCG 2 cut(s) 86, 88
BspHI TCATGA 1 cut(s) 439
BspLI GGNNCC 3 cut(s) 252, 450, 896
BspMAI CTGCAG 2 cut(s) 38, 97
BspOI GCTAGC 1 cut(s) 113
BspT104I TTCGAA 1 cut(s) 316
BspT107I GGYRCC 1 cut(s) 250
BsrDI GCAATG 2 cut(s) 415, 514
BsrFI RCCGGY 2 cut(s) 303, 1030
BsrI ACTGG 2 cut(s) 401, 449
BssAI RCCGGY 2 cut(s) 303, 1030
BssECI CCNNGG 1 cut(s) 357
BssHII GCGCGC 1 cut(s) 84
BssMI GATC 1 cut(s) 337
BssNI GRCGYC 1 cut(s) 722
BssSI CACGAG 1 cut(s) 716
BssT1I CCWWGG 1 cut(s) 357
Bst2BI CACGAG 1 cut(s) 716
Bst4CI ACNGT 1 cut(s) 919
BstACI GRCGYC 1 cut(s) 722
BstAPI GCANNNNNTGC 3 cut(s) 56, 771, 827
BstBI TTCGAA 1 cut(s) 316
BstC8I GCNNGC 6 cut(s) 18, 86, 90, 111, 590, 1032
BstDEI CTNAG 5 cut(s) 520, 806, 1035, 1069, 1079
BstDSI CCRYGG 1 cut(s) 357
BstENI CCTNNNNNAGG 1 cut(s) 729
BstF5I GGATG 1 cut(s) 238
BstFNI CGCG 2 cut(s) 86, 88
BstHHI GCGC 2 cut(s) 86, 88
BstKTI GATC 1 cut(s) 340
BstMAI GTCTC 3 cut(s) 537, 713, 1075
BstMBI GATC 1 cut(s) 337
BstMWI GCNNNNNNNGC 8 cut(s) 10, 56, 92, 589, 638, 771, 827, 1036
BstSCI CCNGG 1 cut(s) 727
BstSFI CTRYAG 2 cut(s) 34, 93
BstSLI GKGCMC 2 cut(s) 294, 782
BstUI CGCG 2 cut(s) 86, 88
BstV1I GCAGC 6 cut(s) 20, 25, 43, 79, 107, 113
BstV2I GAAGAC 1 cut(s) 641
BsuRI GGCC 4 cut(s) 307, 588, 632, 1030
BtgI CCRYGG 1 cut(s) 357
BtgZI GCGATG 1 cut(s) 894
BtsCI GGATG 1 cut(s) 238
BtsIMutI CAGTG 1 cut(s) 1077
Cac8I GCNNGC 6 cut(s) 18, 86, 90, 111, 590, 1032
CaiI CAGNNNCTG 1 cut(s) 56
CciI TCATGA 1 cut(s) 439
CfoI GCGC 2 cut(s) 86, 88
Cfr10I RCCGGY 2 cut(s) 303, 1030
Cfr13I GGNCC 3 cut(s) 449, 587, 656
CseI GACGC 1 cut(s) 730
Csp6I GTAC 6 cut(s) 301, 388, 500, 569, 973, 1019
CviAII CATG 6 cut(s) 358, 435, 440, 653, 736, 1057
CviQI GTAC 6 cut(s) 301, 388, 500, 569, 973, 1019
DdeI CTNAG 5 cut(s) 520, 806, 1035, 1069, 1079
DpnI GATC 1 cut(s) 339
DpnII GATC 1 cut(s) 337
DraI TTTAAA 1 cut(s) 999
DraIII CACNNNGTG 2 cut(s) 298, 1072
Ecl136II GAGCTC 1 cut(s) 478
Eco130I CCWWGG 1 cut(s) 357
Eco24I GRGCYC 2 cut(s) 224, 480
Eco47I GGWCC 2 cut(s) 449, 656
Eco53kI GAGCTC 1 cut(s) 478
Eco57I CTGAAG 1 cut(s) 579
Eco88I CYCGRG 1 cut(s) 114
EcoICRI GAGCTC 1 cut(s) 478
EcoNI CCTNNNNNAGG 1 cut(s) 729
EcoT14I CCWWGG 1 cut(s) 357
EcoT38I GRGCYC 2 cut(s) 224, 480
ErhI CCWWGG 1 cut(s) 357
Esp3I CGTCTC 3 cut(s) 537, 713, 1075
FaeI CATG 6 cut(s) 361, 438, 443, 656, 739, 1060
FalI AAGNNNNNCTT 4 cut(s) 758, 790, 932, 964
FaqI GGGAC 1 cut(s) 462
FatI CATG 6 cut(s) 357, 434, 439, 652, 735, 1056
FauI CCCGC 2 cut(s) 81, 597
Fnu4HI GCNGC 6 cut(s) 14, 34, 57, 93, 96, 127
FokI GGATG 1 cut(s) 225
FriOI GRGCYC 2 cut(s) 224, 480
Fsp4HI GCNGC 6 cut(s) 14, 34, 57, 93, 96, 127
FspBI CTAG 4 cut(s) 110, 120, 584, 783
GlaI GCGC 2 cut(s) 85, 87
GluI GCNGC 6 cut(s) 14, 34, 57, 93, 96, 127
HaeIII GGCC 4 cut(s) 307, 588, 632, 1030
HapII CCGG 5 cut(s) 304, 622, 642, 729, 1031
HgaI GACGC 1 cut(s) 730
HhaI GCGC 2 cut(s) 86, 88
Hin1I GRCGYC 1 cut(s) 722
Hin1II CATG 6 cut(s) 361, 438, 443, 656, 739, 1060
Hin6I GCGC 2 cut(s) 84, 86
HinP1I GCGC 2 cut(s) 84, 86
HinfI GANTC 5 cut(s) 167, 625, 661, 958, 1051
HpaII CCGG 5 cut(s) 304, 622, 642, 729, 1031
Hpy166II GTNNAC 3 cut(s) 292, 301, 715
Hpy188I TCNGA 4 cut(s) 475, 523, 856, 1008
Hpy188III TCNNGA 6 cut(s) 242, 440, 481, 576, 940, 962
Hpy8I GTNNAC 3 cut(s) 292, 301, 715
Hpy99I CGWCG 1 cut(s) 923
HpyAV CCTTC 9 cut(s) 94, 179, 205, 275, 518, 582, 643, 682, 984
HpyCH4III ACNGT 1 cut(s) 919
HpyCH4IV ACGT 1 cut(s) 546
HpyCH4V TGCA 9 cut(s) 36, 64, 72, 78, 95, 292, 507, 830, 985
HpyF10VI GCNNNNNNNGC 8 cut(s) 10, 56, 92, 589, 638, 771, 827, 1036
HpyF3I CTNAG 5 cut(s) 520, 806, 1035, 1069, 1079
HpySE526I ACGT 1 cut(s) 546
Hsp92I GRCGYC 1 cut(s) 722
Hsp92II CATG 6 cut(s) 361, 438, 443, 656, 739, 1060
HspAI GCGC 2 cut(s) 84, 86
KroI GCCGGC 1 cut(s) 1030
KroNI GCCGGC 1 cut(s) 1032
Kzo9I GATC 1 cut(s) 337
LmnI GCTCC 3 cut(s) 475, 681, 894
Lsp1109I GCAGC 6 cut(s) 20, 25, 43, 79, 107, 113
LweI GCATC 1 cut(s) 972
MaeI CTAG 4 cut(s) 110, 120, 584, 783
MaeII ACGT 1 cut(s) 546
MalI GATC 1 cut(s) 339
MboI GATC 1 cut(s) 337
MboII GAAGA 2 cut(s) 496, 641
MfeI CAATTG 1 cut(s) 889
MhlI GDGCHC 4 cut(s) 224, 294, 480, 782
MluCI AATT 8 cut(s) 191, 595, 822, 849, 889, 899, 912, 1086
MlyI GAGTC 1 cut(s) 176
MroNI GCCGGC 1 cut(s) 1030
MroXI GAANNNNTTC 1 cut(s) 488
MseI TTAA 3 cut(s) 752, 998, 1095
MslI CAYNNNNRTG 1 cut(s) 243
MspI CCGG 5 cut(s) 304, 622, 642, 729, 1031
MspR9I CCNGG 1 cut(s) 729
MunI CAATTG 1 cut(s) 889
MvnI CGCG 2 cut(s) 86, 88
MwoI GCNNNNNNNGC 8 cut(s) 10, 56, 92, 589, 638, 771, 827, 1036
NaeI GCCGGC 1 cut(s) 1032
NciI CCSGG 1 cut(s) 729
NcoI CCATGG 1 cut(s) 357
NdeII GATC 1 cut(s) 337
NgoMIV GCCGGC 1 cut(s) 1030
NheI GCTAGC 1 cut(s) 109
NlaIII CATG 6 cut(s) 361, 438, 443, 656, 739, 1060
NlaIV GGNNCC 3 cut(s) 252, 450, 896
NspV TTCGAA 1 cut(s) 316
PagI TCATGA 1 cut(s) 439
PauI GCGCGC 1 cut(s) 84
PdiI GCCGGC 1 cut(s) 1032
PdmI GAANNNNTTC 1 cut(s) 488
PfeI GAWTC 4 cut(s) 625, 661, 958, 1051
PflMI CCANNNNNTGG 1 cut(s) 427
PfoI TCCNGGA 1 cut(s) 727
PkrI GCNGC 6 cut(s) 15, 35, 58, 94, 97, 128
PleI GAGTC 1 cut(s) 175
PpsI GAGTC 1 cut(s) 175
PshBI ATTAAT 1 cut(s) 752
Psp124BI GAGCTC 1 cut(s) 480
PspN4I GGNNCC 3 cut(s) 252, 450, 896
PspPI GGNCC 3 cut(s) 449, 587, 656
PstI CTGCAG 2 cut(s) 38, 97
PstNI CAGNNNCTG 1 cut(s) 56
PteI GCGCGC 1 cut(s) 84
RsaI GTAC 6 cut(s) 302, 389, 501, 570, 974, 1020
RsaNI GTAC 6 cut(s) 301, 388, 500, 569, 973, 1019
RseI CAYNNNNRTG 1 cut(s) 243
SacI GAGCTC 1 cut(s) 480
SaqAI TTAA 3 cut(s) 752, 998, 1095
SatI GCNGC 6 cut(s) 14, 34, 57, 93, 96, 127
Sau3AI GATC 1 cut(s) 337
Sau96I GGNCC 3 cut(s) 449, 587, 656
ScaI AGTACT 1 cut(s) 501
SchI GAGTC 1 cut(s) 176
ScrFI CCNGG 1 cut(s) 729
SduI GDGCHC 4 cut(s) 224, 294, 480, 782
SfaNI GCATC 1 cut(s) 972
SfcI CTRYAG 2 cut(s) 34, 93
SfuI TTCGAA 1 cut(s) 316
SinI GGWCC 2 cut(s) 449, 656
SmiMI CAYNNNNRTG 1 cut(s) 243
Sse9I AATT 8 cut(s) 191, 595, 822, 849, 889, 899, 912, 1086
SsiI CCGC 3 cut(s) 88, 452, 590
SspMI CTAG 4 cut(s) 110, 120, 584, 783
SstI GAGCTC 1 cut(s) 480
StyD4I CCNGG 1 cut(s) 727
StyI CCWWGG 1 cut(s) 357
TaaI ACNGT 1 cut(s) 919
TaiI ACGT 1 cut(s) 549
TaqI TCGA 3 cut(s) 170, 316, 664
TaqII GACCGA 1 cut(s) 673
TasI AATT 8 cut(s) 191, 595, 822, 849, 889, 899, 912, 1086
TatI WGTACW 2 cut(s) 499, 1018
TfiI GAWTC 4 cut(s) 625, 661, 958, 1051
Tru1I TTAA 3 cut(s) 752, 998, 1095
Tru9I TTAA 3 cut(s) 752, 998, 1095
TscAI CASTG 1 cut(s) 1077
TseI GCWGC 6 cut(s) 13, 33, 56, 92, 95, 126
TspDTI ATGAA 8 cut(s) 184, 216, 423, 481, 540, 641, 752, 894
TspGWI ACGGA 2 cut(s) 323, 364
TspRI CASTG 1 cut(s) 1077
Van91I CCANNNNNTGG 1 cut(s) 427
VneI GTGCAC 1 cut(s) 290
VpaK11BI GGWCC 2 cut(s) 449, 656
VspI ATTAAT 1 cut(s) 752
XagI CCTNNNNNAGG 1 cut(s) 729
XmnI GAANNNNTTC 1 cut(s) 488
XspI CTAG 4 cut(s) 110, 120, 584, 783
ZrmI AGTACT 1 cut(s) 501
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.