Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0001855

Physical Location & Seq

Genomic Coordinates Forward (+)

5082376 .. 5085962

Gene Structure 3587 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g09454.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGATGAGTTCTCATAAGAGGATGAAAAGTTTTGAACCGCTGAAGAAGATGAAGAAAATTGGCAACCGACTGGGTACGCTGCTCATCAGCTCTGGGAAGACAGAAAAAGAGTTGCCTGTAGAACAGAGTATCTCGGGTTTGGCTGACATCTTTGAGAACAAACATGATGATGTTGCTAGCTCAGATGCACCAATATTGTGTGAGAACCAGAATGCAGAGTGTTCTAATAATGAAAGCAGTAATGCTAGCACAAATTCATTGATGAGTACCAGTACTAATTCATTGATGAACAGTACTAGTACTAGTAGTCATTCAAGAAGTCCTTTTGGATGTGGTATCTGTCTTGAAAATCTTTTCCTGGAAGACTCATTCTATGTCGAGGGCTGCGACCATCTTTACTGCAGGCAATGCCTTGTTAAATTTGTAGAGTCCAATATCCAAAACAATGTCACATCCATTGGATGCCCTGAGCCGGGATGCATGGGAGTATTAACCCCTGGGTACTGTCGTCCAATCCTTCCTAATGACATCTTTGCTAGGTGGATTCATGCCTTATTTGATGATAATGGGGAATCTTCTAATCCTAAAAGTAATAGTACTAGTACTGGTTCATTTAAGAGTGTTACCAGTACTGATGAGCCAGGTAGTACTTTTATATGTGATATGTGTATTACGCCAAGTCATCTGGAATACTCATTTGATGTCAAGGGTTGCAAACATTTTTATTGTCGGCACTGCATTGTGAATTTTGTAGTGTCCAAGCTCCAAGACAATGTTACATCCATTGTGTGCCCAGAAAGAGGCTGCAGAGGAGTCTTAAACCCTGAGTACTGTCGCACTATTCTCCCAGATAGCATCTTTGATAGCTGGGTATTTTTATTGGATCAACATGGGCAATCTTCAAATCCTGACAGCAATGATGCTATTACTTTTACATGTGATATATGTGGGGAAGCAATTCTTCATCTGGAAGACTCATTTGACATAAAGGGTTGCAATCATTTTTACTGTCGCCAATGCGTTGTTGGTTTCATATCATCCAAGCTCCAGGAGAATGTGACCTTTATTGAGTGCCCTGAACCAGGCTGCAGGGGAGTGTTGGATCTTGAGCACTGTCGTCCAATTCTTCCAAACAAAGTCTTTGATTTGTGGGTTCATGCCTTATGGAATCAAAATGAGCAATCTGCTAATTTTGAAATTTATAATGCTAGTACTTTCATATGTGAATTCTGTGTTGAGGCAGTTGGTCTCGAAGAGTCATTTAGTGTCAAGGGTTGCAGCCATTTCTACTGTCAGCAATGCATTGTTAATTTTGTAGTGTCCAAGCTCCAAGAGAATGTGACATCCATTGAGTGCCCTGAACCAGGCTGCCAGGGAGTGTTGGACCCCGAGTACTGTCGTCCAATCCTCCCAAATGATGTGTTTGATCGGTGGGGAAAAGCTCTGGTTGAAAATCTGATCACTGGATCTGAGACTTTGAAAGCCTTCTACTGTCCCTTCAAGGATTGCTCAGCTATGTTGATTGATGATGGTAATAAGGTTATACAGAAATCAAAGTGTCCATATTGTAAGAAAGTGTTCTGCGCACAGTGTAAGGTTCCTTGGCACGCGAAGATCGACTGTGTGGAGTTTCAGAAGTTGAATGAAGATGAGAGGGGAAGGGAAGATATCATGTTAAGGAACCTTGCGCAGAAGGAAAAATGGAGGAGGTGTCCAAGTTGCCAATATTATGTTGCAAAGAAAAGTGGCTGTTCATACATCAAATGCAGGTGTCGATTTGCTTTCTGCTACCATTGTGGAATAGCAGCTCCCTTAACTGATCATACTCGTTTATGTCCAAGCTGTAAGCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0012505 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044444 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR zf-C3HC4

Protein Analysis

618

Amino Acids

69.27

Weight (kDa)

5.74

Isoelectric Point (pI)

48.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBR	PF01485	400 - 447	1.1e-10	IBR domain, a half RING-finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001855)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53690
fragaria_vesca	FvH4_1g09420 FvH4_1g09451 FvH4_1g09452 FvH4_1g09454 FvH4_1g09454 FvH4_1g09454 FvH4_1g09454 FvH4_1g09930
malus_domestica	MD02G1103000.v1.1 MD02G1103200.v1.1 MD02G1103400.v1.1 MD02G1103500.v1.1 MD15G1224100.v1.1
prunus_persica	Prupe.7G191400_v2.0.a1
pyrus_communis	pycom02g08090 pycom02g08110 pycom02g08120 pycom15g19830
rosa_chinensis	RchiOBHm_Chr2g0095971 RchiOBHm_Chr2g0096011 RchiOBHm_Chr2g0096021 RchiOBHm_Chr2g0096031
rosa_laevigata	RLG00000016613 RLG00000016617 RLG00000016618 RLG00000016629
rosa_multiflora	Rmu_sc0002497.1_g000008 Rmu_sc0010976.1_g000014 Rmu_sc0010976.1_g000016 Rmu_sc0014387.1_g000005
rosa_roxburghii	Rroxscaffold_2G00145840 Rroxscaffold_2G00145850 Rroxscaffold_2G00145860 Rroxscaffold_2G00145900
rosa_rugosa	Rorug02G0055500 Rorug02G0055900
rosa_samantha	Rh2BG104900 Rh2BG105300 Rh2DG105300 Rh2DG105700 Rh2DG105800 Rh2DG105900
rosa_wichuraiana	Rw2G007880 Rw2G007930 Rw2G007940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1203
AarI	CACCTGC	1 cut(s)	1758
Acc16I	TGCGCA	2 cut(s)	1585, 1689
Acc36I	ACCTGC	1 cut(s)	1758
AccII	CGCG	1 cut(s)	1610
AciI	CCGC	1 cut(s)	38
AclWI	GGATC	3 cut(s)	891, 1110, 1474
AcsI	RAATTY	5 cut(s)	253, 419, 745, 1197, 1226
AcuI	CTGAAG	1 cut(s)	62
AfiI	CCNNNNNNNGG	5 cut(s)	472, 473, 800, 1082, 1364
AflIII	ACRYGT	1 cut(s)	935
AgsI	TTSAA	9 cut(s)	35, 315, 347, 903, 1196, 1451, 1480, 1501, 1642
AhlI	ACTAGT	3 cut(s)	296, 302, 599
AjnI	CCWGG	7 cut(s)	357, 496, 640, 1047, 1081, 1363, 1371
Alw21I	GWGCWC	1 cut(s)	1113
Alw26I	GTCTC	2 cut(s)	1253, 1466
AlwI	GGATC	3 cut(s)	891, 1110, 1474
Ama87I	CYCGRG	2 cut(s)	133, 1388
ApeKI	GCWGC	7 cut(s)	79, 384, 804, 1086, 1278, 1368, 1805
ApoI	RAATTY	5 cut(s)	253, 419, 745, 1197, 1226
Asp700I	GAANNNNTTC	3 cut(s)	957, 1484, 1577
AspLEI	GCGC	2 cut(s)	1586, 1690
AspS9I	GGNCC	1 cut(s)	1384
AsuC2I	CCSGG	1 cut(s)	474
AsuNHI	GCTAGC	2 cut(s)	176, 245
AvaI	CYCGRG	2 cut(s)	133, 1388
AvaII	GGWCC	1 cut(s)	1384
BaeGI	GKGCMC	3 cut(s)	794, 1076, 1358
BaeI	ACNNNNGTAYC	2 cut(s)	493, 526
BbsI	GAAGAC	3 cut(s)	104, 369, 978
Bbv12I	GWGCWC	1 cut(s)	1113
BbvI	GCAGC	7 cut(s)	66, 371, 791, 1073, 1290, 1355, 1817
BccI	CCATC	2 cut(s)	399, 1523
BciT130I	CCWGG	7 cut(s)	359, 498, 642, 1049, 1083, 1365, 1373
BclI	TGATCA	2 cut(s)	1458, 1819
BcnI	CCSGG	1 cut(s)	474
BcoDI	GTCTC	2 cut(s)	1253, 1466
BcuI	ACTAGT	3 cut(s)	296, 302, 599
BfaI	CTAG	7 cut(s)	177, 246, 297, 303, 537, 600, 1209
BfmI	CTRYAG	4 cut(s)	117, 400, 805, 1087
BfuAI	ACCTGC	1 cut(s)	1758
BisI	GCNGC	7 cut(s)	80, 385, 805, 1087, 1279, 1369, 1806
BlpI	GCTNAGC	1 cut(s)	1510
BlsI	GCNGC	7 cut(s)	81, 386, 806, 1088, 1280, 1370, 1807
Bme1390I	CCNGG	8 cut(s)	359, 474, 498, 642, 1049, 1083, 1365, 1373
Bme18I	GGWCC	1 cut(s)	1384
BmeT110I	CYCGRG	2 cut(s)	133, 1388
BmgT120I	GGNCC	1 cut(s)	1384
BmiI	GGNNCC	3 cut(s)	1386, 1599, 1682
BmrFI	CCNGG	8 cut(s)	359, 474, 498, 642, 1049, 1083, 1365, 1373
BmrI	ACTGGG	1 cut(s)	80
BmsI	GCATC	5 cut(s)	175, 452, 467, 864, 910
BmtI	GCTAGC	2 cut(s)	180, 249
BmuI	ACTGGG	1 cut(s)	80
BpiI	GAAGAC	3 cut(s)	104, 369, 978
BpmI	CTGGAG	1 cut(s)	1031
Bpu10I	CCTNAGC	1 cut(s)	468
Bpu1102I	GCTNAGC	1 cut(s)	1510
BpuEI	CTTGAG	1 cut(s)	1127
BpuMI	CCSGG	1 cut(s)	474
BsaI	GGTCTC	1 cut(s)	1253
BsaJI	CCNNGG	4 cut(s)	496, 497, 1372, 1601
BsaXI	ACNNNNNCTCC	2 cut(s)	1696, 1726
Bsc4I	CCNNNNNNNGG	5 cut(s)	472, 473, 800, 1082, 1364
Bse1I	ACTGG	5 cut(s)	75, 270, 610, 627, 1468
Bse3DI	GCAATG	3 cut(s)	413, 922, 1304
BseBI	CCWGG	7 cut(s)	359, 498, 642, 1049, 1083, 1365, 1373
BseDI	CCNNGG	4 cut(s)	496, 497, 1372, 1601
BseGI	GGATG	8 cut(s)	27, 335, 452, 467, 482, 779, 1037, 1343
BseLI	CCNNNNNNNGG	5 cut(s)	472, 473, 800, 1082, 1364
BseMI	GCAATG	3 cut(s)	413, 922, 1304
BseMII	CTCAG	5 cut(s)	195, 459, 816, 1461, 1524
BseNI	ACTGG	5 cut(s)	75, 270, 610, 627, 1468
BseRI	GAGGAG	2 cut(s)	825, 1720
BseSI	GKGCMC	3 cut(s)	794, 1076, 1358
BseXI	GCAGC	7 cut(s)	66, 371, 791, 1073, 1290, 1355, 1817
BseYI	CCCAGC	1 cut(s)	867
Bsh1236I	CGCG	1 cut(s)	1610
BsiHKAI	GWGCWC	1 cut(s)	1113
BsiHKCI	CYCGRG	2 cut(s)	133, 1388
BsiSI	CCGG	1 cut(s)	473
BslFI	GGGAC	1 cut(s)	1479
BslI	CCNNNNNNNGG	5 cut(s)	472, 473, 800, 1082, 1364
BsmAI	GTCTC	2 cut(s)	1253, 1466
BsmFI	GGGAC	1 cut(s)	1479
BsmI	GAATGC	1 cut(s)	217
Bso31I	GGTCTC	1 cut(s)	1253
BsoBI	CYCGRG	2 cut(s)	133, 1388
Bsp1286I	GDGCHC	4 cut(s)	794, 1076, 1113, 1358
Bsp143I	GATC	7 cut(s)	883, 1102, 1426, 1458, 1466, 1614, 1819
Bsp1720I	GCTNAGC	1 cut(s)	1510
BspACI	CCGC	1 cut(s)	38
BspCNI	CTCAG	5 cut(s)	194, 460, 817, 1462, 1523
BspFNI	CGCG	1 cut(s)	1610
BspLI	GGNNCC	3 cut(s)	1386, 1599, 1682
BspMAI	CTGCAG	3 cut(s)	404, 809, 1091
BspMI	ACCTGC	1 cut(s)	1758
BspOI	GCTAGC	2 cut(s)	180, 249
BspPI	GGATC	3 cut(s)	891, 1110, 1474
BspTNI	GGTCTC	1 cut(s)	1253
BsrDI	GCAATG	3 cut(s)	413, 922, 1304
BsrI	ACTGG	5 cut(s)	75, 270, 610, 627, 1468
BssECI	CCNNGG	4 cut(s)	496, 497, 1372, 1601
BssMI	GATC	7 cut(s)	883, 1102, 1426, 1458, 1466, 1614, 1819
BssT1I	CCWWGG	1 cut(s)	1601
Bst2UI	CCWGG	7 cut(s)	359, 498, 642, 1049, 1083, 1365, 1373
Bst6I	CTCTTC	1 cut(s)	1248
BstAPI	GCANNNNNTGC	1 cut(s)	408
BstC8I	GCNNGC	4 cut(s)	178, 247, 404, 1608
BstDEI	CTNAG	5 cut(s)	181, 468, 825, 1470, 1510
BstENI	CCTNNNNNAGG	2 cut(s)	1080, 1362
BstF5I	GGATG	8 cut(s)	27, 335, 452, 467, 482, 779, 1037, 1343
BstFNI	CGCG	1 cut(s)	1610
BstHHI	GCGC	2 cut(s)	1586, 1690
BstKTI	GATC	7 cut(s)	886, 1105, 1429, 1461, 1469, 1617, 1822
BstMAI	GTCTC	2 cut(s)	1253, 1466
BstMBI	GATC	7 cut(s)	883, 1102, 1426, 1458, 1466, 1614, 1819
BstMWI	GCNNNNNNNGC	1 cut(s)	408
BstNI	CCWGG	7 cut(s)	359, 498, 642, 1049, 1083, 1365, 1373
BstNSI	RCATGY	1 cut(s)	939
BstSCI	CCNGG	8 cut(s)	357, 472, 496, 640, 1047, 1081, 1363, 1371
BstSFI	CTRYAG	4 cut(s)	117, 400, 805, 1087
BstSLI	GKGCMC	3 cut(s)	794, 1076, 1358
BstUI	CGCG	1 cut(s)	1610
BstV1I	GCAGC	7 cut(s)	66, 371, 791, 1073, 1290, 1355, 1817
BstV2I	GAAGAC	3 cut(s)	104, 369, 978
BstX2I	RGATCY	2 cut(s)	1102, 1466
BstYI	RGATCY	2 cut(s)	1102, 1466
BtsCI	GGATG	8 cut(s)	27, 335, 452, 467, 482, 779, 1037, 1343
BtsI	GCAGTG	1 cut(s)	733
BtsIMutI	CAGTG	4 cut(s)	733, 1111, 1461, 1595
BveI	ACCTGC	1 cut(s)	1758
Cac8I	GCNNGC	4 cut(s)	178, 247, 404, 1608
CfoI	GCGC	2 cut(s)	1586, 1690
Cfr13I	GGNCC	1 cut(s)	1384
CviAII	CATG	7 cut(s)	164, 481, 548, 890, 936, 1157, 1672
DdeI	CTNAG	5 cut(s)	181, 468, 825, 1470, 1510
DpnI	GATC	7 cut(s)	885, 1104, 1428, 1460, 1468, 1616, 1821
DpnII	GATC	7 cut(s)	883, 1102, 1426, 1458, 1466, 1614, 1819
Eam1104I	CTCTTC	1 cut(s)	1248
EarI	CTCTTC	1 cut(s)	1248
Eco130I	CCWWGG	1 cut(s)	1601
Eco31I	GGTCTC	1 cut(s)	1253
Eco32I	GATATC	1 cut(s)	1669
Eco47I	GGWCC	1 cut(s)	1384
Eco57I	CTGAAG	1 cut(s)	62
Eco88I	CYCGRG	2 cut(s)	133, 1388
EcoNI	CCTNNNNNAGG	2 cut(s)	1080, 1362
EcoRI	GAATTC	1 cut(s)	1226
EcoRII	CCWGG	7 cut(s)	357, 496, 640, 1047, 1081, 1363, 1371
EcoRV	GATATC	1 cut(s)	1669
EcoT14I	CCWWGG	1 cut(s)	1601
EcoT22I	ATGCAT	2 cut(s)	482, 1304
ErhI	CCWWGG	1 cut(s)	1601
FaeI	CATG	7 cut(s)	167, 484, 551, 893, 939, 1160, 1675
FalI	AAGNNNNNCTT	4 cut(s)	307, 339, 945, 977
FaqI	GGGAC	1 cut(s)	1479
FatI	CATG	7 cut(s)	163, 480, 547, 889, 935, 1156, 1671
FauNDI	CATATG	1 cut(s)	1220
FbaI	TGATCA	2 cut(s)	1458, 1819
Fnu4HI	GCNGC	7 cut(s)	80, 385, 805, 1087, 1279, 1369, 1806
FokI	GGATG	8 cut(s)	34, 342, 439, 474, 489, 766, 1024, 1330
Fsp4HI	GCNGC	7 cut(s)	80, 385, 805, 1087, 1279, 1369, 1806
FspBI	CTAG	7 cut(s)	177, 246, 297, 303, 537, 600, 1209
FspI	TGCGCA	2 cut(s)	1585, 1689
GlaI	GCGC	2 cut(s)	1585, 1689
GluI	GCNGC	7 cut(s)	80, 385, 805, 1087, 1279, 1369, 1806
GsaI	CCCAGC	1 cut(s)	871
GsuI	CTGGAG	1 cut(s)	1031
HapII	CCGG	1 cut(s)	473
HhaI	GCGC	2 cut(s)	1586, 1690
Hin1II	CATG	7 cut(s)	167, 484, 551, 893, 939, 1160, 1675
Hin6I	GCGC	2 cut(s)	1584, 1688
HinP1I	GCGC	2 cut(s)	1584, 1688
HinfI	GANTC	8 cut(s)	365, 428, 544, 572, 813, 974, 1168, 1256
HpaII	CCGG	1 cut(s)	473
Hpy188I	TCNGA	4 cut(s)	184, 1458, 1471, 1635
Hpy188III	TCNNGA	7 cut(s)	315, 344, 686, 908, 968, 1106, 1250
HpyAV	CCTTC	5 cut(s)	527, 1495, 1507, 1653, 1687
HpyF10VI	GCNNNNNNNGC	1 cut(s)	408
HpyF3I	CTNAG	5 cut(s)	181, 468, 825, 1470, 1510
Hsp92II	CATG	7 cut(s)	167, 484, 551, 893, 939, 1160, 1675
HspAI	GCGC	2 cut(s)	1584, 1688
Ksp22I	TGATCA	2 cut(s)	1458, 1819
Kzo9I	GATC	7 cut(s)	883, 1102, 1426, 1458, 1466, 1614, 1819
LmnI	GCTCC	4 cut(s)	768, 1050, 1332, 1813
Lsp1109I	GCAGC	7 cut(s)	66, 371, 791, 1073, 1290, 1355, 1817
LweI	GCATC	5 cut(s)	175, 452, 467, 864, 910
MaeI	CTAG	7 cut(s)	177, 246, 297, 303, 537, 600, 1209
MaeIII	GTNAC	5 cut(s)	448, 622, 775, 1057, 1339
MalI	GATC	7 cut(s)	885, 1104, 1428, 1460, 1468, 1616, 1821
MboI	GATC	7 cut(s)	883, 1102, 1426, 1458, 1466, 1614, 1819
MflI	RGATCY	2 cut(s)	1102, 1466
MhlI	GDGCHC	4 cut(s)	794, 1076, 1113, 1358
MlyI	GAGTC	5 cut(s)	359, 437, 822, 968, 1265
MmeI	TCCRAC	2 cut(s)	1080, 1362
MnlI	CCTC	9 cut(s)	12, 373, 794, 803, 1231, 1418, 1647, 1698, 1701
Mph1103I	ATGCAT	2 cut(s)	482, 1304
MroXI	GAANNNNTTC	3 cut(s)	957, 1484, 1577
MseI	TTAA	8 cut(s)	417, 491, 615, 818, 1308, 1676, 1814, 1852
MslI	CAYNNNNRTG	1 cut(s)	168
MspA1I	CMGCKG	1 cut(s)	40
MspI	CCGG	1 cut(s)	473
MspR9I	CCNGG	8 cut(s)	359, 474, 498, 642, 1049, 1083, 1365, 1373
Mva1269I	GAATGC	1 cut(s)	217
MvaI	CCWGG	7 cut(s)	359, 498, 642, 1049, 1083, 1365, 1373
MvnI	CGCG	1 cut(s)	1610
MwoI	GCNNNNNNNGC	1 cut(s)	408
NciI	CCSGG	1 cut(s)	474
NdeI	CATATG	1 cut(s)	1220
NdeII	GATC	7 cut(s)	883, 1102, 1426, 1458, 1466, 1614, 1819
NheI	GCTAGC	2 cut(s)	176, 245
NlaIII	CATG	7 cut(s)	167, 484, 551, 893, 939, 1160, 1675
NlaIV	GGNNCC	3 cut(s)	1386, 1599, 1682
NmuCI	GTSAC	3 cut(s)	448, 1057, 1339
NsbI	TGCGCA	2 cut(s)	1585, 1689
NsiI	ATGCAT	2 cut(s)	482, 1304
NspI	RCATGY	1 cut(s)	939
PaqCI	CACCTGC	1 cut(s)	1758
PasI	CCCWGGG	1 cut(s)	497
PciI	ACATGT	1 cut(s)	935
PcsI	WCGNNNNNNNCGW	2 cut(s)	384, 1614
PctI	GAATGC	1 cut(s)	217
PdmI	GAANNNNTTC	3 cut(s)	957, 1484, 1577
PfeI	GAWTC	3 cut(s)	544, 572, 1168
PfoI	TCCNGGA	2 cut(s)	357, 1047
PkrI	GCNGC	7 cut(s)	81, 386, 806, 1088, 1280, 1370, 1807
PleI	GAGTC	5 cut(s)	359, 436, 821, 968, 1264
PpsI	GAGTC	5 cut(s)	359, 436, 821, 968, 1264
PscI	ACATGT	1 cut(s)	935
PsiI	TTATAA	1 cut(s)	1203
Psp6I	CCWGG	7 cut(s)	357, 496, 640, 1047, 1081, 1363, 1371
PspFI	CCCAGC	1 cut(s)	867
PspGI	CCWGG	7 cut(s)	357, 496, 640, 1047, 1081, 1363, 1371
PspN4I	GGNNCC	3 cut(s)	1386, 1599, 1682
PspPI	GGNCC	1 cut(s)	1384
PstI	CTGCAG	3 cut(s)	404, 809, 1091
PsuI	RGATCY	2 cut(s)	1102, 1466
RseI	CAYNNNNRTG	1 cut(s)	168
SaqAI	TTAA	8 cut(s)	417, 491, 615, 818, 1308, 1676, 1814, 1852
SatI	GCNGC	7 cut(s)	80, 385, 805, 1087, 1279, 1369, 1806
Sau3AI	GATC	7 cut(s)	883, 1102, 1426, 1458, 1466, 1614, 1819
Sau96I	GGNCC	1 cut(s)	1384
SchI	GAGTC	5 cut(s)	359, 437, 822, 968, 1265
ScrFI	CCNGG	8 cut(s)	359, 474, 498, 642, 1049, 1083, 1365, 1373
SduI	GDGCHC	4 cut(s)	794, 1076, 1113, 1358
SfaNI	GCATC	5 cut(s)	175, 452, 467, 864, 910
SfcI	CTRYAG	4 cut(s)	117, 400, 805, 1087
SinI	GGWCC	1 cut(s)	1384
SmiMI	CAYNNNNRTG	1 cut(s)	168
SmlI	CTYRAG	1 cut(s)	1106
SmoI	CTYRAG	1 cut(s)	1106
SpeI	ACTAGT	3 cut(s)	296, 302, 599
SsiI	CCGC	1 cut(s)	38
SspI	AATATT	2 cut(s)	195, 1727
SspMI	CTAG	7 cut(s)	177, 246, 297, 303, 537, 600, 1209
StyD4I	CCNGG	8 cut(s)	357, 472, 496, 640, 1047, 1081, 1363, 1371
StyI	CCWWGG	1 cut(s)	1601
TaqI	TCGA	4 cut(s)	378, 1251, 1617, 1774
TfiI	GAWTC	3 cut(s)	544, 572, 1168
Tru1I	TTAA	8 cut(s)	417, 491, 615, 818, 1308, 1676, 1814, 1852
Tru9I	TTAA	8 cut(s)	417, 491, 615, 818, 1308, 1676, 1814, 1852
TscAI	CASTG	4 cut(s)	740, 1118, 1468, 1595
TseFI	GTSAC	3 cut(s)	448, 1057, 1339
TseI	GCWGC	7 cut(s)	79, 384, 804, 1086, 1278, 1368, 1805
Tsp45I	GTSAC	3 cut(s)	448, 1057, 1339
TspRI	CASTG	4 cut(s)	740, 1118, 1468, 1595
VpaK11BI	GGWCC	1 cut(s)	1384
XagI	CCTNNNNNAGG	2 cut(s)	1080, 1362
XapI	RAATTY	5 cut(s)	253, 419, 745, 1197, 1226
XceI	RCATGY	1 cut(s)	939
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1022
XmnI	GAANNNNTTC	3 cut(s)	957, 1484, 1577
XspI	CTAG	7 cut(s)	177, 246, 297, 303, 537, 600, 1209
Zsp2I	ATGCAT	2 cut(s)	482, 1304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.