Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0001855

Physical Location & Seq

Genomic Coordinates Forward (+)

8630729 .. 8632789

Gene Structure 2061 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG105800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1254 bp

ATGGGTATTCTTAAGAGCGTGAAAACTTTAGGAACACTGAAGGGTATGAAGAAAATTGGCAGAGAAGTGGGTAAGATCATCCCTACGAGTAGAAAAGTACATGTGGAACAAACTCTGGCTTCGGTTAACAATTTCGACCCCAAATATTATGATGATACTAAAGATCTCATGACCCCGCTACTGTCGAGCAACAAGAACGGAAAATCTTCTGATCCTGAAACTCCAATAAGTACTACTTTTATTTGTGATATCTGTGTTAAGCGAACTCATTTGGAAGATTCACTCGACGTTGAGGGTTGCAACCATTTTTATTGTGGGCAATGCATTGTGGATTTTGTATTGGCCAAGCTCGGAGACAATGTCACATCCATTGTATGCCCTGAAGCAGGCTGCAGAGGAGTGTTAGAACCCGAGTACTGTCGTCCAATCCTCCCAAACAATGTCTTTGATCGGTGGGTCAACGCCTTACATGATCATAATGGGCAGCCTTCTGACGCTGAAATCTACAGTAGTAGCCCAAGTACTTCTACATGTGATTTCTGTGCTGAACCAGTTCATCTGGAGGACTCATTGGGCGTCAAGGGTTGCAATCATTTTTACTGTCGACAATGCATTGTTAATTTCGTATCGTCCAAGCTCGAAGACAACGTCACGTCCATTATGTGCCCTGAAGCAGGCTGCAGTGGAGTGCTAGACCCTGAGTACTGTCGTCCAATCCTTCCGAACGAGGTCTTTGATTGGTGGGAGACTGCCTTACAAAGTCAAAATGAGCATTCTTCGAATCCTGAAATCAATGATCCTCGTACTAGCAATGACACTAGTACTTTCATATGTGATCTCTGCGTTAAGTCATTTCCGCTTGAAAAGTCATTCAACATCAAGGGTTGCAGCCACTTTTACTGTCAGCAGTGCATAGTTAATTTCGTATCATCGAAGCTCCAAGACAATGTCACCTCCATTGAGTGCCCCGAACCAGGCTGCTGGGGAGTGCTAGACCCCGAGTACTGTCATCCAATCCTCCCAAACGACATCTACGACCAGTGGGGAAAAGCCCTATGTGAAAATGTGATCATGGGATCCGAAAGCACTATGAACTACTTCTACTGTCCCTTTGCAGATTGCTCGGCGCTGTTGATTTGTGACGAACAGAATCAGAATGAGTCTCAGTGTCCTCACTGCGAGAGAGCGGTCTGCGCCAAGTGTAAGGTTCCTTGGCATAACGAATTTAATTGTGACGAGTTTCAAAGGCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0012505 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044444 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR zf-C3HC4

Protein Analysis

417

Amino Acids

46.73

Weight (kDa)

4.82

Isoelectric Point (pI)

43.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBR	PF01485	361 - 411	3.4e-09	IBR domain, a half RING-finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001855)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53690
fragaria_vesca	FvH4_1g09420 FvH4_1g09451 FvH4_1g09452 FvH4_1g09454 FvH4_1g09454 FvH4_1g09454 FvH4_1g09454 FvH4_1g09930
malus_domestica	MD02G1103000.v1.1 MD02G1103200.v1.1 MD02G1103400.v1.1 MD02G1103500.v1.1 MD15G1224100.v1.1
prunus_persica	Prupe.7G191400_v2.0.a1
pyrus_communis	pycom02g08090 pycom02g08110 pycom02g08120 pycom15g19830
rosa_chinensis	RchiOBHm_Chr2g0095971 RchiOBHm_Chr2g0096011 RchiOBHm_Chr2g0096021 RchiOBHm_Chr2g0096031
rosa_laevigata	RLG00000016613 RLG00000016617 RLG00000016618 RLG00000016629
rosa_multiflora	Rmu_sc0002497.1_g000008 Rmu_sc0010976.1_g000014 Rmu_sc0010976.1_g000016 Rmu_sc0014387.1_g000005
rosa_roxburghii	Rroxscaffold_2G00145840 Rroxscaffold_2G00145850 Rroxscaffold_2G00145860 Rroxscaffold_2G00145900
rosa_rugosa	Rorug02G0055500 Rorug02G0055900
rosa_samantha	Rh2BG104900 Rh2BG105300 Rh2DG105300 Rh2DG105700 Rh2DG105800 Rh2DG105900
rosa_wichuraiana	Rw2G007880 Rw2G007930 Rw2G007940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1187
AccI	GTMKAC	1 cut(s)	604
AciI	CCGC	3 cut(s)	176, 857, 1187
AclWI	GGATC	4 cut(s)	206, 791, 1071, 1084
AcoI	YGGCCR	1 cut(s)	342
AcsI	RAATTY	1 cut(s)	1223
AcuI	CTGAAG	3 cut(s)	59, 402, 690
AcyI	GRCGYC	1 cut(s)	576
AfaI	GTAC	8 cut(s)	99, 232, 416, 523, 704, 805, 823, 1004
AfiI	CCNNNNNNNGG	3 cut(s)	386, 674, 974
AflII	CTTAAG	1 cut(s)	11
AflIII	ACRYGT	2 cut(s)	100, 530
AgsI	TTSAA	3 cut(s)	863, 874, 1244
AhlI	ACTAGT	1 cut(s)	818
AjiI	CACGTC	1 cut(s)	654
AjnI	CCWGG	1 cut(s)	973
AluBI	AGCT	3 cut(s)	349, 637, 937
AluI	AGCT	3 cut(s)	349, 637, 937
Alw26I	GTCTC	3 cut(s)	348, 740, 1167
AlwI	GGATC	4 cut(s)	206, 791, 1071, 1084
Ama87I	CYCGRG	2 cut(s)	410, 998
AoxI	GGCC	1 cut(s)	342
ApeKI	GCWGC	5 cut(s)	390, 484, 678, 888, 978
ApoI	RAATTY	1 cut(s)	1223
ArsI	GACNNNNNNTTYG	2 cut(s)	633, 665
Asp700I	GAANNNNTTC	3 cut(s)	205, 552, 1097
AspLEI	GCGC	2 cut(s)	1129, 1196
AsuHPI	GGTGA	1 cut(s)	943
AsuII	TTCGAA	1 cut(s)	779
AvaI	CYCGRG	2 cut(s)	410, 998
BaeGI	GKGCMC	2 cut(s)	668, 968
BalI	TGGCCA	1 cut(s)	344
BamHI	GGATCC	1 cut(s)	1076
BbsI	GAAGAC	1 cut(s)	648
BbvI	GCAGC	5 cut(s)	377, 496, 665, 900, 965
BcgI	CGANNNNNNTGC	2 cut(s)	1104, 1138
BciT130I	CCWGG	1 cut(s)	975
BclI	TGATCA	2 cut(s)	472, 1068
BcoDI	GTCTC	3 cut(s)	348, 740, 1167
BcuI	ACTAGT	1 cut(s)	818
BfaI	CTAG	4 cut(s)	692, 807, 819, 992
BfmI	CTRYAG	3 cut(s)	391, 505, 679
BfoI	RGCGCY	1 cut(s)	1130
BfrI	CTTAAG	1 cut(s)	11
BglII	AGATCT	1 cut(s)	163
BisI	GCNGC	5 cut(s)	391, 485, 679, 889, 979
BlsI	GCNGC	5 cut(s)	392, 486, 680, 890, 980
BmcAI	AGTACT	6 cut(s)	232, 416, 523, 704, 823, 1004
Bme1390I	CCNGG	1 cut(s)	975
BmeT110I	CYCGRG	2 cut(s)	410, 998
BmgBI	CACGTC	1 cut(s)	654
BmiI	GGNNCC	2 cut(s)	1078, 1209
BmrFI	CCNGG	1 cut(s)	975
BpiI	GAAGAC	1 cut(s)	648
BpmI	CTGGAG	1 cut(s)	581
Bpu14I	TTCGAA	1 cut(s)	779
BsaHI	GRCGYC	1 cut(s)	576
BsaJI	CCNNGG	1 cut(s)	1211
BsaXI	ACNNNNNCTCC	2 cut(s)	345, 375
Bsc4I	CCNNNNNNNGG	3 cut(s)	386, 674, 974
Bse1I	ACTGG	2 cut(s)	551, 1039
Bse3DI	GCAATG	2 cut(s)	326, 817
BseBI	CCWGG	1 cut(s)	975
BseDI	CCNNGG	1 cut(s)	1211
BseGI	GGATG	3 cut(s)	78, 365, 1009
BseLI	CCNNNNNNNGG	3 cut(s)	386, 674, 974
BseMI	GCAATG	2 cut(s)	326, 817
BseMII	CTCAG	2 cut(s)	690, 1178
BseNI	ACTGG	2 cut(s)	551, 1039
BseRI	GAGGAG	1 cut(s)	411
BseSI	GKGCMC	2 cut(s)	668, 968
BseXI	GCAGC	5 cut(s)	377, 496, 665, 900, 965
BseYI	CCCAGC	1 cut(s)	981
BshFI	GGCC	1 cut(s)	344
BsiHKCI	CYCGRG	2 cut(s)	410, 998
BslFI	GGGAC	1 cut(s)	1092
BslI	CCNNNNNNNGG	3 cut(s)	386, 674, 974
BsmAI	GTCTC	3 cut(s)	348, 740, 1167
BsmFI	GGGAC	1 cut(s)	1092
BsmI	GAATGC	1 cut(s)	772
BsnI	GGCC	1 cut(s)	344
BsoBI	CYCGRG	2 cut(s)	410, 998
Bsp119I	TTCGAA	1 cut(s)	779
Bsp1286I	GDGCHC	2 cut(s)	668, 968
Bsp143I	GATC	9 cut(s)	75, 163, 211, 448, 472, 796, 835, 1068, 1076
BspACI	CCGC	3 cut(s)	176, 857, 1187
BspANI	GGCC	1 cut(s)	344
BspCNI	CTCAG	2 cut(s)	691, 1177
BspHI	TCATGA	1 cut(s)	168
BspLI	GGNNCC	2 cut(s)	1078, 1209
BspMAI	CTGCAG	2 cut(s)	395, 683
BspPI	GGATC	4 cut(s)	206, 791, 1071, 1084
BspT104I	TTCGAA	1 cut(s)	779
BspTI	CTTAAG	1 cut(s)	11
BsrBI	CCGCTC	1 cut(s)	1187
BsrDI	GCAATG	2 cut(s)	326, 817
BsrI	ACTGG	2 cut(s)	551, 1039
BssECI	CCNNGG	1 cut(s)	1211
BssMI	GATC	9 cut(s)	75, 163, 211, 448, 472, 796, 835, 1068, 1076
BssNI	GRCGYC	1 cut(s)	576
BssT1I	CCWWGG	1 cut(s)	1211
Bst2UI	CCWGG	1 cut(s)	975
Bst4CI	ACNGT	8 cut(s)	183, 419, 509, 602, 707, 902, 1007, 1106
BstACI	GRCGYC	1 cut(s)	576
BstAFI	CTTAAG	1 cut(s)	11
BstBI	TTCGAA	1 cut(s)	779
BstC8I	GCNNGC	2 cut(s)	388, 676
BstDEI	CTNAG	2 cut(s)	699, 1164
BstENI	CCTNNNNNAGG	2 cut(s)	384, 672
BstF5I	GGATG	3 cut(s)	78, 365, 1009
BstH2I	RGCGCY	1 cut(s)	1130
BstHHI	GCGC	2 cut(s)	1129, 1196
BstKTI	GATC	9 cut(s)	78, 166, 214, 451, 475, 799, 838, 1071, 1079
BstMAI	GTCTC	3 cut(s)	348, 740, 1167
BstMBI	GATC	9 cut(s)	75, 163, 211, 448, 472, 796, 835, 1068, 1076
BstMWI	GCNNNNNNNGC	1 cut(s)	1193
BstNI	CCWGG	1 cut(s)	975
BstNSI	RCATGY	2 cut(s)	104, 534
BstSCI	CCNGG	1 cut(s)	973
BstSFI	CTRYAG	3 cut(s)	391, 505, 679
BstSLI	GKGCMC	2 cut(s)	668, 968
BstV1I	GCAGC	5 cut(s)	377, 496, 665, 900, 965
BstV2I	GAAGAC	1 cut(s)	648
BstX2I	RGATCY	2 cut(s)	163, 1076
BstXI	CCANNNNNNTGG	1 cut(s)	981
BstYI	RGATCY	2 cut(s)	163, 1076
BsuRI	GGCC	1 cut(s)	344
BtrI	CACGTC	1 cut(s)	654
BtsCI	GGATG	3 cut(s)	78, 365, 1009
BtsI	GCAGTG	3 cut(s)	688, 914, 1174
BtsIMutI	CAGTG	6 cut(s)	35, 688, 914, 1046, 1172, 1174
Cac8I	GCNNGC	2 cut(s)	388, 676
CciI	TCATGA	1 cut(s)	168
CfoI	GCGC	2 cut(s)	1129, 1196
CseI	GACGC	2 cut(s)	503, 565
Csp6I	GTAC	8 cut(s)	98, 231, 415, 522, 703, 804, 822, 1003
CviAII	CATG	5 cut(s)	101, 169, 470, 531, 1072
CviQI	GTAC	8 cut(s)	98, 231, 415, 522, 703, 804, 822, 1003
DdeI	CTNAG	2 cut(s)	699, 1164
DpnI	GATC	9 cut(s)	77, 165, 213, 450, 474, 798, 837, 1070, 1078
DpnII	GATC	9 cut(s)	75, 163, 211, 448, 472, 796, 835, 1068, 1076
EaeI	YGGCCR	1 cut(s)	342
Eco130I	CCWWGG	1 cut(s)	1211
Eco32I	GATATC	1 cut(s)	250
Eco57I	CTGAAG	3 cut(s)	59, 402, 690
Eco88I	CYCGRG	2 cut(s)	410, 998
EcoNI	CCTNNNNNAGG	2 cut(s)	384, 672
EcoRII	CCWGG	1 cut(s)	973
EcoRV	GATATC	1 cut(s)	250
EcoT14I	CCWWGG	1 cut(s)	1211
EcoT22I	ATGCAT	2 cut(s)	326, 614
ErhI	CCWWGG	1 cut(s)	1211
FaeI	CATG	5 cut(s)	104, 172, 473, 534, 1075
FalI	AAGNNNNNCTT	2 cut(s)	220, 252
FaqI	GGGAC	1 cut(s)	1092
FatI	CATG	5 cut(s)	100, 168, 469, 530, 1071
FauI	CCCGC	1 cut(s)	183
FauNDI	CATATG	1 cut(s)	830
FbaI	TGATCA	2 cut(s)	472, 1068
FblI	GTMKAC	1 cut(s)	604
Fnu4HI	GCNGC	5 cut(s)	391, 485, 679, 889, 979
FokI	GGATG	3 cut(s)	65, 352, 996
Fsp4HI	GCNGC	5 cut(s)	391, 485, 679, 889, 979
FspBI	CTAG	4 cut(s)	692, 807, 819, 992
GlaI	GCGC	2 cut(s)	1128, 1195
GluI	GCNGC	5 cut(s)	391, 485, 679, 889, 979
GsaI	CCCAGC	1 cut(s)	985
GsuI	CTGGAG	1 cut(s)	581
HaeII	RGCGCY	1 cut(s)	1130
HaeIII	GGCC	1 cut(s)	344
HgaI	GACGC	2 cut(s)	503, 565
HhaI	GCGC	2 cut(s)	1129, 1196
Hin1I	GRCGYC	1 cut(s)	576
Hin1II	CATG	5 cut(s)	104, 172, 473, 534, 1075
Hin6I	GCGC	2 cut(s)	1127, 1194
HinP1I	GCGC	2 cut(s)	1127, 1194
HincII	GTYRAC	3 cut(s)	127, 460, 605
HindII	GTYRAC	3 cut(s)	127, 460, 605
HinfI	GANTC	5 cut(s)	278, 566, 781, 1150, 1160
HpaI	GTTAAC	1 cut(s)	127
HphI	GGTGA	1 cut(s)	943
Hpy166II	GTNNAC	3 cut(s)	127, 460, 605
Hpy188I	TCNGA	6 cut(s)	211, 353, 493, 723, 1081, 1155
Hpy188III	TCNNGA	4 cut(s)	169, 215, 560, 785
Hpy8I	GTNNAC	3 cut(s)	127, 460, 605
Hpy99I	CGWCG	1 cut(s)	290
HpyAV	CCTTC	3 cut(s)	34, 498, 728
HpyCH4III	ACNGT	8 cut(s)	183, 419, 509, 602, 707, 902, 1007, 1106
HpyCH4IV	ACGT	3 cut(s)	288, 648, 653
HpyCH4V	TGCA	9 cut(s)	300, 324, 393, 588, 612, 681, 888, 912, 1115
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1193
HpyF3I	CTNAG	2 cut(s)	699, 1164
HpySE526I	ACGT	3 cut(s)	288, 648, 653
Hsp92I	GRCGYC	1 cut(s)	576
Hsp92II	CATG	5 cut(s)	104, 172, 473, 534, 1075
HspAI	GCGC	2 cut(s)	1127, 1194
Ksp22I	TGATCA	2 cut(s)	472, 1068
KspAI	GTTAAC	1 cut(s)	127
Kzo9I	GATC	9 cut(s)	75, 163, 211, 448, 472, 796, 835, 1068, 1076
LmnI	GCTCC	1 cut(s)	942
Lsp1109I	GCAGC	5 cut(s)	377, 496, 665, 900, 965
MaeI	CTAG	4 cut(s)	692, 807, 819, 992
MaeII	ACGT	3 cut(s)	288, 648, 653
MaeIII	GTNAC	5 cut(s)	361, 649, 949, 1139, 1232
MalI	GATC	9 cut(s)	77, 165, 213, 450, 474, 798, 837, 1070, 1078
MbiI	CCGCTC	1 cut(s)	1187
MboI	GATC	9 cut(s)	75, 163, 211, 448, 472, 796, 835, 1068, 1076
MboII	GAAGA	5 cut(s)	61, 198, 287, 653, 768
MflI	RGATCY	2 cut(s)	163, 1076
MhlI	GDGCHC	2 cut(s)	668, 968
MlsI	TGGCCA	1 cut(s)	344
MluCI	AATT	6 cut(s)	54, 130, 619, 919, 1223, 1228
MluNI	TGGCCA	1 cut(s)	344
MlyI	GAGTC	2 cut(s)	560, 1169
MnlI	CCTC	9 cut(s)	286, 389, 440, 556, 721, 810, 964, 1028, 1182
Mox20I	TGGCCA	1 cut(s)	344
Mph1103I	ATGCAT	2 cut(s)	326, 614
MroXI	GAANNNNTTC	3 cut(s)	205, 552, 1097
MscI	TGGCCA	1 cut(s)	344
MseI	TTAA	7 cut(s)	12, 126, 258, 618, 846, 918, 1227
Msp20I	TGGCCA	1 cut(s)	344
MspCI	CTTAAG	1 cut(s)	11
MspR9I	CCNGG	1 cut(s)	975
Mva1269I	GAATGC	1 cut(s)	772
MvaI	CCWGG	1 cut(s)	975
MwoI	GCNNNNNNNGC	1 cut(s)	1193
NdeI	CATATG	1 cut(s)	830
NdeII	GATC	9 cut(s)	75, 163, 211, 448, 472, 796, 835, 1068, 1076
NlaIII	CATG	5 cut(s)	104, 172, 473, 534, 1075
NlaIV	GGNNCC	2 cut(s)	1078, 1209
NmeAIII	GCCGAG	1 cut(s)	1103
NmuCI	GTSAC	5 cut(s)	361, 649, 949, 1139, 1232
NsiI	ATGCAT	2 cut(s)	326, 614
NspI	RCATGY	2 cut(s)	104, 534
NspV	TTCGAA	1 cut(s)	779
PagI	TCATGA	1 cut(s)	168
PciI	ACATGT	2 cut(s)	100, 530
PcsI	WCGNNNNNNNCGW	2 cut(s)	645, 1032
PctI	GAATGC	1 cut(s)	772
PdmI	GAANNNNTTC	3 cut(s)	205, 552, 1097
PfeI	GAWTC	3 cut(s)	278, 781, 1150
PflFI	GACNNNGTC	3 cut(s)	359, 647, 947
PkrI	GCNGC	5 cut(s)	392, 486, 680, 890, 980
PleI	GAGTC	2 cut(s)	560, 1168
PpsI	GAGTC	2 cut(s)	560, 1168
PscI	ACATGT	2 cut(s)	100, 530
Psp6I	CCWGG	1 cut(s)	973
PspFI	CCCAGC	1 cut(s)	981
PspGI	CCWGG	1 cut(s)	973
PspN4I	GGNNCC	2 cut(s)	1078, 1209
PsrI	GAACNNNNNNTAC	2 cut(s)	1085, 1117
PstI	CTGCAG	2 cut(s)	395, 683
PsuI	RGATCY	2 cut(s)	163, 1076
PsyI	GACNNNGTC	3 cut(s)	359, 647, 947
RsaI	GTAC	8 cut(s)	99, 232, 416, 523, 704, 805, 823, 1004
RsaNI	GTAC	8 cut(s)	98, 231, 415, 522, 703, 804, 822, 1003
SalI	GTCGAC	1 cut(s)	603
SaqAI	TTAA	7 cut(s)	12, 126, 258, 618, 846, 918, 1227
SatI	GCNGC	5 cut(s)	391, 485, 679, 889, 979
Sau3AI	GATC	9 cut(s)	75, 163, 211, 448, 472, 796, 835, 1068, 1076
ScaI	AGTACT	6 cut(s)	232, 416, 523, 704, 823, 1004
SchI	GAGTC	2 cut(s)	560, 1169
ScrFI	CCNGG	1 cut(s)	975
SduI	GDGCHC	2 cut(s)	668, 968
SetI	ASST	9 cut(s)	291, 351, 639, 651, 656, 732, 939, 956, 1209
SfcI	CTRYAG	3 cut(s)	391, 505, 679
SfuI	TTCGAA	1 cut(s)	779
SmlI	CTYRAG	1 cut(s)	11
SmoI	CTYRAG	1 cut(s)	11
SpeI	ACTAGT	1 cut(s)	818
Sse9I	AATT	6 cut(s)	54, 130, 619, 919, 1223, 1228
SsiI	CCGC	3 cut(s)	176, 857, 1187
SspI	AATATT	1 cut(s)	146
SspMI	CTAG	4 cut(s)	692, 807, 819, 992
StyD4I	CCNGG	1 cut(s)	973
StyI	CCWWGG	1 cut(s)	1211
TaaI	ACNGT	8 cut(s)	183, 419, 509, 602, 707, 902, 1007, 1106
TaiI	ACGT	3 cut(s)	291, 651, 656
TaqI	TCGA	7 cut(s)	135, 185, 285, 604, 639, 779, 932
TasI	AATT	6 cut(s)	54, 130, 619, 919, 1223, 1228
TatI	WGTACW	7 cut(s)	97, 230, 414, 521, 702, 821, 1002
TfiI	GAWTC	3 cut(s)	278, 781, 1150
Tru1I	TTAA	7 cut(s)	12, 126, 258, 618, 846, 918, 1227
Tru9I	TTAA	7 cut(s)	12, 126, 258, 618, 846, 918, 1227
TscAI	CASTG	6 cut(s)	42, 688, 914, 1046, 1172, 1181
TseFI	GTSAC	5 cut(s)	361, 649, 949, 1139, 1232
TseI	GCWGC	5 cut(s)	390, 484, 678, 888, 978
Tsp45I	GTSAC	5 cut(s)	361, 649, 949, 1139, 1232
TspDTI	ATGAA	4 cut(s)	62, 545, 817, 1106
TspGWI	ACGGA	1 cut(s)	213
TspRI	CASTG	6 cut(s)	42, 688, 914, 1046, 1172, 1181
Tth111I	GACNNNGTC	3 cut(s)	359, 647, 947
Vha464I	CTTAAG	1 cut(s)	11
XagI	CCTNNNNNAGG	2 cut(s)	384, 672
XapI	RAATTY	1 cut(s)	1223
XceI	RCATGY	2 cut(s)	104, 534
XcmI	CCANNNNNNNNNTGG	1 cut(s)	311
XmiI	GTMKAC	1 cut(s)	604
XmnI	GAANNNNTTC	3 cut(s)	205, 552, 1097
XspI	CTAG	4 cut(s)	692, 807, 819, 992
ZrmI	AGTACT	6 cut(s)	232, 416, 523, 704, 823, 1004
Zsp2I	ATGCAT	2 cut(s)	326, 614

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.