Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0001268

Physical Location & Seq

Genomic Coordinates Reverse (-)

9266583 .. 9269633

Gene Structure 3051 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g16180.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2220 bp

ATGCCAGCACTACTTAAGTCCACTTCCCTCCCAGTCTCAGAAACTCATCAACCCCATTTCTCAACAACAATGGCTACCACCTTATCTCTCTGTGTTATTGCTCTCTTTCTTCTTCCAATCATGGTTTCTCCAGAGTCTCACTCCTACACCGTCTACATGGATCCCTCCCTCAAGCCCACACCCTTCTCAGATCACCACACTTGGTATTTGGCCACACTGTCTTCTCTGTCACAAGGTGAAACCAAGCTAATTCACACCTACACTGAAGCCATCCAAGGCTTCAGTGCAATTCTCACCCCATCTGAGCTTCAAGCTCTTCCAAGCACCCCCGGCTTGGTTTCCTATTCTCGTAATCGTCCTCTGAAACTTCTCACCACGCATTCTTCTGAATTCCTTGGTCTGACACCCAAGTATGGTGCTTGGCCCATTTCAGGCTACGGTGAAAATGTCATCATCGGTTTACTTGACACCGGTGTTTGGCCGGAAAGTGAGAGTTTTGGAGACGAAGGAATGACTGGAGTCCCATCTCGGTGGAAAGGAACCTGCGAATCCGACACGCACTTCAACTCCTCCTCCTGCAACAACAAACTGATCGGAGCCCGGTTTTACAACAAAGGGTATATAGCAGAGAATCCCGACAAAAACATCTCCATCAACTCAGTCCGCGACACAAACGGTCATGGGACTCATACTTCTTCAACTGCGGCTGGTAATTATATCAAGGGAGCGTCCTATTTCGGCTACGCCTCCGGCACAGCTAAAGGCATGGCTCCAAGAGCTCGGCTAGCCATTTACAAAGTTGGTTGGTATGGCGAAGTGTCCCCAGCAGATCTCCTAGCAGCTGTGGACCAAGCAATCCGAGACGGTGTTGATATATTATCAATGTCCTTGGGATACAGCTTAGGCAATGACACACATTTGGATGATGACCCGGTTGCAGTAGCAACTTTTGCAGCCATGAAGAAGGGTATGTTTGTTGCTGCTGCAGCCGGAAATGATGGTCCAGATCTTCTTTCTTTAGCTAATGGAGCACCCTGGGTTACGGTAGTCGGCGCAGGAACTATGGACCGGAAGCTGGGAGGAATTCTGACATTGGGAAACGGCATGAAAGTCACTTTCATATCCTTGTATCTAGGAATCTTTTCTCGAGATACACAGTTTCCCCTGGTTTTCAATGATAGCAGTCAAGAACTCAAAGGCAAGATTGTTGTTCTTGTTGGCAAAGACGATGTGAGCATGGAACTTCAACTGGGGAATGCCATATCTGCAAAGGCTTCCGCAGCTCTTTTCATTACCAATGCCTCAGAATACAGCATCGGAAGTTTCTTCCCAGCAGGGTTTGTTGGTGACCAAGATGGCAAAACACTGATAAACTACATTAAGCAGAGTAGCTTTCCTACAGGAGCTTTGTGGTTCAAAAAGACATTCATTGGCAAAAAGCCAGCACCACTTGTTGATTCCTATAGCTCCAGAGGGCCATTCCCAAGTTGTCCTACAGTTTTGAAGCCTGACATTAGTGCCCCCGGAACATCAATCTTGGCCTCATGGTCCCCCATTAGTTCAGCATCTCCAGATCCTTTTCGCCCTTTATTTAGTAACTTCAATCTTGCGGATGGGACTTCAATGGCGACGCCCCATGTCGCTGGTGTCGCTGCACTTGTGAAATCAGTGCATCCGGATTGGAGTCCCGCGGCCATCAGATCAGCACTCATGACCACAGCTAATGCATATGACAACACCGGCAGCCATATAAAAGACGTTAATGGAGGCCTCATTGCTAGCCCGTTAGCCATTGGAGCAGGGCACGTTCGCCCCAACAATGCTCTTTATCCAGGCCTGGTCTATGACGCCGGCGAAGATGACTACAAAAGGTTGTTGTGTGCGATGAACTACACGGCAAAGCAAATCCGAACGATCACAGGCTCCACTTTCAAATGTGCCAATTGGTCCAACACTCAGCTTAACTACCCATCTTTTATTGCTTTTCTCAATAGTGATGGTTCAAATGTTGTGCAAGAGTTCAGGAGGACACTAACTAATGTGGGTGAGGAAGAGTCATGTTATAGTGTTTATATCTCAGCCATGGCAGGTTTTAAACTCAAGGTCGAACCGGAGAGGTTGACGTTCAAGAGAAAGTACGAGAAGCGAAGCTACAAGTTGACTATGGAAGGTCCTAAATTCGGAAACAAGATGTGGTTCATGGGTCGCTTAGCTGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0043170 GO:0044238 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

740

Amino Acids

79.43

Weight (kDa)

7.98

Isoelectric Point (pI)

32.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	48 - 123	5.2e-11	Peptidase inhibitor I9
Peptidase_S8	PF00082	147 - 579	9.9e-49	Subtilase family
fn3_6	PF17766	653 - 737	5.5e-18	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001268)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67090
fragaria_vesca	FvH4_1g16180 FvH4_2g34170 FvH4_2g34170 FvH4_2g34230 FvH4_6g01060 FvH4_6g01061
malus_domestica	MD04G1236800.v1.1 MD04G1236900.v1.1 MD08G1098100.v1.1 MD15G1080600.v1.1 MD15G1285300.v1.1
prunus_persica	Prupe.1G433300_v2.0.a1 Prupe.6G168400_v2.0.a1 Prupe.6G356800_v2.0.a1 Prupe.7G131900_v2.0.a1
pyrus_communis	pycom04g21060 pycom04g21070 pycom08g07990 pycom12g23460 pycom15g07490 pycom15g24800
rosa_chinensis	RchiOBHm_Chr2g0105861 RchiOBHm_Chr2g0105881 RchiOBHm_Chr3g0448571 RchiOBHm_Chr6g0308191
rosa_laevigata	RLG00000010660 RLG00000017466 RLG00000017467 RLG00000025886 RLG00000025888 RLG00000025889 RLG00000025890
rosa_multiflora	Rmu_sc0003116.1_g000043 Rmu_sc0004367.1_g000007 Rmu_sc0004367.1_g000008 Rmu_sc0005706.1_g000016 Rmu_sc0010389.1_g000023
rosa_roxburghii	Rroxscaffold_2G00137780 Rroxscaffold_6G00426820 Rroxscaffold_6G00426860 Rroxscaffold_7G00160370 Rroxscaffold_7G00160460
rosa_rugosa	Rorug02G0131300 Rorug02G0131500 Rorug02G0613500 Rorug02G0613600 Rorug06G0364600
rosa_samantha	Rh2CG186700 Rh3DG013500 Rh6DG475800
rosa_wichuraiana	Rw2G014280 Rw2G014290 Rw3G000970 Rw6G041320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	551, 2078
AccI	GTMKAC	1 cut(s)	153
AccII	CGCG	2 cut(s)	666, 1691
AccIII	TCCGGA	1 cut(s)	1675
AciI	CCGC	6 cut(s)	664, 704, 1278, 1610, 1689, 1691
AclWI	GGATC	3 cut(s)	155, 168, 1568
AcoI	YGGCCR	3 cut(s)	210, 479, 1692
AcsI	RAATTY	3 cut(s)	389, 1083, 2177
AcuI	CTGAAG	2 cut(s)	265, 285
AcyI	GRCGYC	2 cut(s)	1631, 1848
AdeI	CACNNNGTG	1 cut(s)	236
AfaI	GTAC	1 cut(s)	2138
AfiI	CCNNNNNNNGG	6 cut(s)	334, 413, 431, 477, 1075, 2180
AflII	CTTAAG	1 cut(s)	14
AgeI	ACCGGT	1 cut(s)	470
AjnI	CCWGG	4 cut(s)	1034, 1164, 1831, 1836
AjuI	GAANNNNNNNTTGG	2 cut(s)	109, 141
Alw21I	GWGCWC	2 cut(s)	781, 1033
Alw26I	GTCTC	4 cut(s)	40, 141, 495, 855
AlwI	GGATC	3 cut(s)	155, 168, 1568
Ama87I	CYCGRG	1 cut(s)	1146
Aor13HI	TCCGGA	1 cut(s)	1675
AoxI	GGCC	8 cut(s)	210, 422, 479, 1475, 1539, 1692, 1768, 1834
ApeKI	GCWGC	8 cut(s)	839, 953, 980, 983, 986, 1280, 1652, 1743
ApoI	RAATTY	3 cut(s)	389, 1083, 2177
AsiGI	ACCGGT	1 cut(s)	470
Asp700I	GAANNNNTTC	1 cut(s)	1141
AspLEI	GCGC	1 cut(s)	1055
AspS9I	GGNCC	8 cut(s)	423, 847, 1001, 1066, 1475, 1548, 1947, 2171
AsuC2I	CCSGG	4 cut(s)	330, 601, 932, 1524
AsuHPI	GGTGA	7 cut(s)	185, 248, 286, 364, 452, 1358, 2057
AsuNHI	GCTAGC	2 cut(s)	784, 1778
AvaI	CYCGRG	1 cut(s)	1146
AvaII	GGWCC	6 cut(s)	847, 1001, 1066, 1548, 1947, 2171
BaeGI	GKGCMC	2 cut(s)	1522, 1806
BalI	TGGCCA	1 cut(s)	212
BamHI	GGATCC	1 cut(s)	160
BanII	GRGCYC	2 cut(s)	601, 781
BarI	GAAGNNNNNNTAC	2 cut(s)	2135, 2167
BbsI	GAAGAC	1 cut(s)	213
Bbv12I	GWGCWC	2 cut(s)	781, 1033
BbvI	GCAGC	8 cut(s)	851, 965, 967, 970, 998, 1292, 1639, 1755
BceAI	ACGGC	2 cut(s)	1117, 1911
BciT130I	CCWGG	4 cut(s)	1036, 1166, 1833, 1838
BciVI	GTATCC	1 cut(s)	887
BcnI	CCSGG	4 cut(s)	330, 601, 932, 1524
BcoDI	GTCTC	4 cut(s)	40, 141, 495, 855
BfaI	CTAG	4 cut(s)	785, 836, 1133, 1779
BfmI	CTRYAG	4 cut(s)	984, 1398, 1462, 1494
BfrI	CTTAAG	1 cut(s)	14
BfuAI	ACCTGC	2 cut(s)	551, 2078
BfuI	GTATCC	1 cut(s)	887
BglII	AGATCT	2 cut(s)	829, 1006
BlpI	GCTNAGC	1 cut(s)	2209
Bme1390I	CCNGG	8 cut(s)	330, 601, 932, 1036, 1166, 1524, 1833, 1838
Bme18I	GGWCC	6 cut(s)	847, 1001, 1066, 1548, 1947, 2171
BmeT110I	CYCGRG	1 cut(s)	1146
BmgT120I	GGNCC	8 cut(s)	423, 847, 1001, 1066, 1475, 1548, 1947, 2171
BmiI	GGNNCC	6 cut(s)	162, 541, 598, 771, 1550, 1924
BmrFI	CCNGG	8 cut(s)	330, 601, 932, 1036, 1166, 1524, 1833, 1838
BmrI	ACTGGG	2 cut(s)	26, 1259
BmsI	GCATC	3 cut(s)	1323, 1574, 1681
BmtI	GCTAGC	2 cut(s)	788, 1782
BmuI	ACTGGG	2 cut(s)	26, 1259
BoxI	GACNNNNGTC	1 cut(s)	518
BpiI	GAAGAC	1 cut(s)	213
BplI	GAGNNNNNCTC	2 cut(s)	125, 157
BpmI	CTGGAG	4 cut(s)	114, 537, 1453, 1554
Bpu10I	CCTNAGC	1 cut(s)	901
Bpu1102I	GCTNAGC	1 cut(s)	2209
BpuEI	CTTGAG	2 cut(s)	155, 2084
BpuMI	CCSGG	4 cut(s)	330, 601, 932, 1524
BsaHI	GRCGYC	2 cut(s)	1631, 1848
BsaWI	WCCGGW	4 cut(s)	470, 1068, 1675, 2110
BsaXI	ACNNNNNCTCC	4 cut(s)	551, 557, 581, 587
Bsc4I	CCNNNNNNNGG	6 cut(s)	334, 413, 431, 477, 1075, 2180
Bse118I	RCCGGY	3 cut(s)	470, 1739, 1850
Bse1I	ACTGG	3 cut(s)	32, 520, 1254
Bse3DI	GCAATG	2 cut(s)	913, 1773
BseAI	TCCGGA	1 cut(s)	1675
BseBI	CCWGG	4 cut(s)	1036, 1166, 1833, 1838
BseGI	GGATG	4 cut(s)	270, 928, 1618, 1672
BseLI	CCNNNNNNNGG	6 cut(s)	334, 413, 431, 477, 1075, 2180
BseMI	GCAATG	2 cut(s)	913, 1773
BseMII	CTCAG	7 cut(s)	51, 201, 294, 672, 1317, 1970, 2091
BseNI	ACTGG	3 cut(s)	32, 520, 1254
BseRI	GAGGAG	2 cut(s)	559, 562
BseSI	GKGCMC	2 cut(s)	1522, 1806
BseXI	GCAGC	8 cut(s)	851, 965, 967, 970, 998, 1292, 1639, 1755
BseYI	CCCAGC	4 cut(s)	823, 1075, 1330, 2213
BsgI	GTGCAG	1 cut(s)	1638
Bsh1236I	CGCG	2 cut(s)	666, 1691
BshFI	GGCC	8 cut(s)	212, 424, 481, 1477, 1541, 1694, 1770, 1836
BshTI	ACCGGT	1 cut(s)	470
BsiHKAI	GWGCWC	2 cut(s)	781, 1033
BsiHKCI	CYCGRG	1 cut(s)	1146
BslFI	GGGAC	6 cut(s)	506, 697, 805, 1534, 1630, 1671
BslI	CCNNNNNNNGG	6 cut(s)	334, 413, 431, 477, 1075, 2180
BsmAI	GTCTC	4 cut(s)	40, 141, 495, 855
BsmBI	CGTCTC	2 cut(s)	495, 855
BsmFI	GGGAC	6 cut(s)	506, 697, 805, 1534, 1630, 1671
BsmI	GAATGC	2 cut(s)	379, 1261
BsnI	GGCC	8 cut(s)	212, 424, 481, 1477, 1541, 1694, 1770, 1836
BsoBI	CYCGRG	1 cut(s)	1146
Bsp1286I	GDGCHC	5 cut(s)	601, 781, 1033, 1522, 1806
Bsp13I	TCCGGA	1 cut(s)	1675
Bsp143I	GATC	8 cut(s)	160, 190, 591, 829, 1006, 1573, 1700, 1914
Bsp1720I	GCTNAGC	1 cut(s)	2209
Bsp19I	CCATGG	1 cut(s)	2082
BspACI	CCGC	6 cut(s)	664, 704, 1278, 1610, 1689, 1691
BspANI	GGCC	8 cut(s)	212, 424, 481, 1477, 1541, 1694, 1770, 1836
BspCNI	CTCAG	7 cut(s)	50, 200, 295, 671, 1316, 1969, 2090
BspEI	TCCGGA	1 cut(s)	1675
BspFNI	CGCG	2 cut(s)	666, 1691
BspHI	TCATGA	1 cut(s)	1710
BspLI	GGNNCC	6 cut(s)	162, 541, 598, 771, 1550, 1924
BspMAI	CTGCAG	1 cut(s)	988
BspMI	ACCTGC	2 cut(s)	551, 2078
BspOI	GCTAGC	2 cut(s)	788, 1782
BspPI	GGATC	3 cut(s)	155, 168, 1568
BspQI	GCTCTTC	1 cut(s)	321
BspTI	CTTAAG	1 cut(s)	14
BsrDI	GCAATG	2 cut(s)	913, 1773
BsrFI	RCCGGY	3 cut(s)	470, 1739, 1850
BsrI	ACTGG	3 cut(s)	32, 520, 1254
BssAI	RCCGGY	3 cut(s)	470, 1739, 1850
BssMI	GATC	8 cut(s)	160, 190, 591, 829, 1006, 1573, 1700, 1914
BssNI	GRCGYC	2 cut(s)	1631, 1848
BssT1I	CCWWGG	4 cut(s)	274, 394, 888, 2082
Bst2UI	CCWGG	4 cut(s)	1036, 1166, 1833, 1838
Bst4CI	ACNGT	8 cut(s)	151, 219, 440, 677, 866, 1045, 1158, 1498
Bst6I	CTCTTC	2 cut(s)	321, 2046
BstACI	GRCGYC	2 cut(s)	1631, 1848
BstAFI	CTTAAG	1 cut(s)	14
BstAPI	GCANNNNNTGC	1 cut(s)	950
BstC8I	GCNNGC	5 cut(s)	6, 786, 1443, 1780, 1852
BstDEI	CTNAG	9 cut(s)	37, 187, 303, 658, 901, 1303, 1956, 2077, 2209
BstDSI	CCRYGG	2 cut(s)	1689, 2082
BstEII	GGTNACC	1 cut(s)	1346
BstF5I	GGATG	4 cut(s)	270, 928, 1618, 1672
BstFNI	CGCG	2 cut(s)	666, 1691
BstHHI	GCGC	1 cut(s)	1055
BstKTI	GATC	8 cut(s)	163, 193, 594, 832, 1009, 1576, 1703, 1917
BstMAI	GTCTC	4 cut(s)	40, 141, 495, 855
BstMBI	GATC	8 cut(s)	160, 190, 591, 829, 1006, 1573, 1700, 1914
BstNI	CCWGG	4 cut(s)	1036, 1166, 1833, 1838
BstPAI	GACNNNNGTC	1 cut(s)	518
BstPI	GGTNACC	1 cut(s)	1346
BstSCI	CCNGG	8 cut(s)	328, 599, 930, 1034, 1164, 1522, 1831, 1836
BstSFI	CTRYAG	4 cut(s)	984, 1398, 1462, 1494
BstSLI	GKGCMC	2 cut(s)	1522, 1806
BstUI	CGCG	2 cut(s)	666, 1691
BstV1I	GCAGC	8 cut(s)	851, 965, 967, 970, 998, 1292, 1639, 1755
BstV2I	GAAGAC	1 cut(s)	213
BstX2I	RGATCY	4 cut(s)	160, 829, 1006, 1573
BstXI	CCANNNNNNTGG	2 cut(s)	531, 1643
BstYI	RGATCY	4 cut(s)	160, 829, 1006, 1573
BsuI	GTATCC	1 cut(s)	887
BsuRI	GGCC	8 cut(s)	212, 424, 481, 1477, 1541, 1694, 1770, 1836
BtgI	CCRYGG	2 cut(s)	1689, 2082
BtgZI	GCGATG	1 cut(s)	1898
BtsCI	GGATG	4 cut(s)	270, 928, 1618, 1672
BtsIMutI	CAGTG	5 cut(s)	215, 261, 289, 1364, 1674
BveI	ACCTGC	2 cut(s)	551, 2078
Cac8I	GCNNGC	5 cut(s)	6, 786, 1443, 1780, 1852
CciI	TCATGA	1 cut(s)	1710
CfoI	GCGC	1 cut(s)	1055
Cfr10I	RCCGGY	3 cut(s)	470, 1739, 1850
Cfr13I	GGNCC	8 cut(s)	423, 847, 1001, 1066, 1475, 1548, 1947, 2171
Cfr42I	CCGCGG	1 cut(s)	1692
CseI	GACGC	3 cut(s)	717, 1639, 1856
Csp6I	GTAC	1 cut(s)	2137
CspAI	ACCGGT	1 cut(s)	470
CviQI	GTAC	1 cut(s)	2137
DdeI	CTNAG	9 cut(s)	37, 187, 303, 658, 901, 1303, 1956, 2077, 2209
DpnI	GATC	8 cut(s)	162, 192, 593, 831, 1008, 1575, 1702, 1916
DpnII	GATC	8 cut(s)	160, 190, 591, 829, 1006, 1573, 1700, 1914
DraI	TTTAAA	1 cut(s)	2095
DraIII	CACNNNGTG	1 cut(s)	236
EaeI	YGGCCR	3 cut(s)	210, 479, 1692
Eam1104I	CTCTTC	2 cut(s)	321, 2046
EarI	CTCTTC	2 cut(s)	321, 2046
Ecl136II	GAGCTC	1 cut(s)	779
Eco130I	CCWWGG	4 cut(s)	274, 394, 888, 2082
Eco147I	AGGCCT	2 cut(s)	1770, 1836
Eco24I	GRGCYC	2 cut(s)	601, 781
Eco47I	GGWCC	6 cut(s)	847, 1001, 1066, 1548, 1947, 2171
Eco53kI	GAGCTC	1 cut(s)	779
Eco57I	CTGAAG	2 cut(s)	265, 285
Eco88I	CYCGRG	1 cut(s)	1146
Eco91I	GGTNACC	1 cut(s)	1346
EcoICRI	GAGCTC	1 cut(s)	779
EcoO109I	RGGNCCY	1 cut(s)	2171
EcoO65I	GGTNACC	1 cut(s)	1346
EcoRI	GAATTC	2 cut(s)	389, 1083
EcoRII	CCWGG	4 cut(s)	1034, 1164, 1831, 1836
EcoT14I	CCWWGG	4 cut(s)	274, 394, 888, 2082
EcoT22I	ATGCAT	1 cut(s)	1729
EcoT38I	GRGCYC	2 cut(s)	601, 781
ErhI	CCWWGG	4 cut(s)	274, 394, 888, 2082
Esp3I	CGTCTC	2 cut(s)	495, 855
FaqI	GGGAC	6 cut(s)	506, 697, 805, 1534, 1630, 1671
FauI	CCCGC	1 cut(s)	1696
FauNDI	CATATG	1 cut(s)	1729
FblI	GTMKAC	1 cut(s)	153
FokI	GGATG	4 cut(s)	257, 935, 1625, 1659
FriOI	GRGCYC	2 cut(s)	601, 781
FspBI	CTAG	4 cut(s)	785, 836, 1133, 1779
GlaI	GCGC	1 cut(s)	1054
GsaI	CCCAGC	4 cut(s)	827, 1079, 1334, 2217
GsuI	CTGGAG	4 cut(s)	114, 537, 1453, 1554
HaeIII	GGCC	8 cut(s)	212, 424, 481, 1477, 1541, 1694, 1770, 1836
HgaI	GACGC	3 cut(s)	717, 1639, 1856
HhaI	GCGC	1 cut(s)	1055
Hin1I	GRCGYC	2 cut(s)	1631, 1848
Hin6I	GCGC	1 cut(s)	1053
HinP1I	GCGC	1 cut(s)	1053
HincII	GTYRAC	2 cut(s)	2121, 2160
HindII	GTYRAC	2 cut(s)	2121, 2160
HinfI	GANTC	9 cut(s)	134, 519, 548, 631, 685, 1137, 1457, 1684, 2054
HphI	GGTGA	7 cut(s)	185, 248, 286, 364, 452, 1358, 2057
Hpy166II	GTNNAC	6 cut(s)	21, 154, 461, 847, 2121, 2160
Hpy8I	GTNNAC	6 cut(s)	21, 154, 461, 847, 2121, 2160
Hpy99I	CGWCG	1 cut(s)	1633
HpyAV	CCTTC	4 cut(s)	193, 500, 958, 2162
HpyCH4III	ACNGT	8 cut(s)	151, 219, 440, 677, 866, 1045, 1158, 1498
HpyCH4IV	ACGT	3 cut(s)	1758, 1806, 2123
HpyF3I	CTNAG	9 cut(s)	37, 187, 303, 658, 901, 1303, 1956, 2077, 2209
HpySE526I	ACGT	3 cut(s)	1758, 1806, 2123
Hsp92I	GRCGYC	2 cut(s)	1631, 1848
HspAI	GCGC	1 cut(s)	1053
Kpn2I	TCCGGA	1 cut(s)	1675
KroI	GCCGGC	1 cut(s)	1850
KroNI	GCCGGC	1 cut(s)	1852
KspI	CCGCGG	1 cut(s)	1692
Kzo9I	GATC	8 cut(s)	160, 190, 591, 829, 1006, 1573, 1700, 1914
LguI	GCTCTTC	1 cut(s)	321
LmnI	GCTCC	8 cut(s)	596, 725, 775, 1028, 1403, 1472, 1796, 1928
Lsp1109I	GCAGC	8 cut(s)	851, 965, 967, 970, 998, 1292, 1639, 1755
LweI	GCATC	3 cut(s)	1323, 1574, 1681
MaeI	CTAG	4 cut(s)	785, 836, 1133, 1779
MaeII	ACGT	3 cut(s)	1758, 1806, 2123
MaeIII	GTNAC	5 cut(s)	228, 1039, 1111, 1346, 1595
MalI	GATC	8 cut(s)	162, 192, 593, 831, 1008, 1575, 1702, 1916
MboI	GATC	8 cut(s)	160, 190, 591, 829, 1006, 1573, 1700, 1914
MfeI	CAATTG	1 cut(s)	1942
MflI	RGATCY	4 cut(s)	160, 829, 1006, 1573
MhlI	GDGCHC	5 cut(s)	601, 781, 1033, 1522, 1806
MlsI	TGGCCA	1 cut(s)	212
MluCI	AATT	7 cut(s)	249, 288, 389, 712, 1083, 1942, 2177
MluNI	TGGCCA	1 cut(s)	212
MlyI	GAGTC	5 cut(s)	143, 528, 679, 1693, 2063
MmeI	TCCRAC	2 cut(s)	576, 1974
Mox20I	TGGCCA	1 cut(s)	212
Mph1103I	ATGCAT	1 cut(s)	1729
MreI	CGCCGGCG	1 cut(s)	1850
MroI	TCCGGA	1 cut(s)	1675
MroNI	GCCGGC	1 cut(s)	1850
MroXI	GAANNNNTTC	1 cut(s)	1141
MscI	TGGCCA	1 cut(s)	212
MseI	TTAA	5 cut(s)	15, 1380, 1761, 1962, 2094
MslI	CAYNNNNRTG	2 cut(s)	529, 921
Msp20I	TGGCCA	1 cut(s)	212
MspA1I	CMGCKG	2 cut(s)	842, 1691
MspCI	CTTAAG	1 cut(s)	14
MspR9I	CCNGG	8 cut(s)	330, 601, 932, 1036, 1166, 1524, 1833, 1838
MunI	CAATTG	1 cut(s)	1942
Mva1269I	GAATGC	2 cut(s)	379, 1261
MvaI	CCWGG	4 cut(s)	1036, 1166, 1833, 1838
MvnI	CGCG	2 cut(s)	666, 1691
NaeI	GCCGGC	1 cut(s)	1852
NciI	CCSGG	4 cut(s)	330, 601, 932, 1524
NcoI	CCATGG	1 cut(s)	2082
NdeI	CATATG	1 cut(s)	1729
NdeII	GATC	8 cut(s)	160, 190, 591, 829, 1006, 1573, 1700, 1914
NgoMIV	GCCGGC	1 cut(s)	1850
NheI	GCTAGC	2 cut(s)	784, 1778
NlaIV	GGNNCC	6 cut(s)	162, 541, 598, 771, 1550, 1924
NmeAIII	GCCGAG	1 cut(s)	760
NmuCI	GTSAC	3 cut(s)	228, 1111, 1346
NsiI	ATGCAT	1 cut(s)	1729
PaeR7I	CTCGAG	1 cut(s)	1146
PagI	TCATGA	1 cut(s)	1710
PasI	CCCWGGG	1 cut(s)	1035
PceI	AGGCCT	2 cut(s)	1770, 1836
PciSI	GCTCTTC	1 cut(s)	321
PctI	GAATGC	2 cut(s)	379, 1261
PdiI	GCCGGC	1 cut(s)	1852
PdmI	GAANNNNTTC	1 cut(s)	1141
PfeI	GAWTC	4 cut(s)	548, 631, 1137, 1457
PinAI	ACCGGT	1 cut(s)	470
PleI	GAGTC	5 cut(s)	142, 527, 679, 1692, 2062
PpsI	GAGTC	5 cut(s)	142, 527, 679, 1692, 2062
PpuMI	RGGWCCY	1 cut(s)	2171
PshAI	GACNNNNGTC	1 cut(s)	518
Psp124BI	GAGCTC	1 cut(s)	781
Psp5II	RGGWCCY	1 cut(s)	2171
Psp6I	CCWGG	4 cut(s)	1034, 1164, 1831, 1836
PspEI	GGTNACC	1 cut(s)	1346
PspFI	CCCAGC	4 cut(s)	823, 1075, 1330, 2213
PspGI	CCWGG	4 cut(s)	1034, 1164, 1831, 1836
PspN4I	GGNNCC	6 cut(s)	162, 541, 598, 771, 1550, 1924
PspPI	GGNCC	8 cut(s)	423, 847, 1001, 1066, 1475, 1548, 1947, 2171
PspPPI	RGGWCCY	1 cut(s)	2171
PstI	CTGCAG	1 cut(s)	988
PsuI	RGATCY	4 cut(s)	160, 829, 1006, 1573
PvuII	CAGCTG	1 cut(s)	842
RsaI	GTAC	1 cut(s)	2138
RsaNI	GTAC	1 cut(s)	2137
RseI	CAYNNNNRTG	2 cut(s)	529, 921
SacI	GAGCTC	1 cut(s)	781
SacII	CCGCGG	1 cut(s)	1692
SapI	GCTCTTC	1 cut(s)	321
SaqAI	TTAA	5 cut(s)	15, 1380, 1761, 1962, 2094
Sau3AI	GATC	8 cut(s)	160, 190, 591, 829, 1006, 1573, 1700, 1914
Sau96I	GGNCC	8 cut(s)	423, 847, 1001, 1066, 1475, 1548, 1947, 2171
SchI	GAGTC	5 cut(s)	143, 528, 679, 1693, 2063
ScrFI	CCNGG	8 cut(s)	330, 601, 932, 1036, 1166, 1524, 1833, 1838
SduI	GDGCHC	5 cut(s)	601, 781, 1033, 1522, 1806
SfaNI	GCATC	3 cut(s)	1323, 1574, 1681
SfcI	CTRYAG	4 cut(s)	984, 1398, 1462, 1494
Sfr274I	CTCGAG	1 cut(s)	1146
Sfr303I	CCGCGG	1 cut(s)	1692
SgrAI	CRCCGGYG	2 cut(s)	470, 1850
SgrBI	CCGCGG	1 cut(s)	1692
SinI	GGWCC	6 cut(s)	847, 1001, 1066, 1548, 1947, 2171
SlaI	CTCGAG	1 cut(s)	1146
SmiMI	CAYNNNNRTG	2 cut(s)	529, 921
SmlI	CTYRAG	4 cut(s)	14, 170, 1146, 2099
SmoI	CTYRAG	4 cut(s)	14, 170, 1146, 2099
Sse9I	AATT	7 cut(s)	249, 288, 389, 712, 1083, 1942, 2177
SseBI	AGGCCT	2 cut(s)	1770, 1836
SsiI	CCGC	6 cut(s)	664, 704, 1278, 1610, 1689, 1691
SspMI	CTAG	4 cut(s)	785, 836, 1133, 1779
SstI	GAGCTC	1 cut(s)	781
StuI	AGGCCT	2 cut(s)	1770, 1836
StyD4I	CCNGG	8 cut(s)	328, 599, 930, 1034, 1164, 1522, 1831, 1836
StyI	CCWWGG	4 cut(s)	274, 394, 888, 2082
TaaI	ACNGT	8 cut(s)	151, 219, 440, 677, 866, 1045, 1158, 1498
TaiI	ACGT	3 cut(s)	1761, 1809, 2126
TaqI	TCGA	2 cut(s)	1147, 2106
TasI	AATT	7 cut(s)	249, 288, 389, 712, 1083, 1942, 2177
TauI	GCSGC	2 cut(s)	707, 1694
TfiI	GAWTC	4 cut(s)	548, 631, 1137, 1457
Tru1I	TTAA	5 cut(s)	15, 1380, 1761, 1962, 2094
Tru9I	TTAA	5 cut(s)	15, 1380, 1761, 1962, 2094
TscAI	CASTG	5 cut(s)	222, 268, 289, 1371, 1674
TseFI	GTSAC	3 cut(s)	228, 1111, 1346
TseI	GCWGC	8 cut(s)	839, 953, 980, 983, 986, 1280, 1652, 1743
Tsp45I	GTSAC	3 cut(s)	228, 1111, 1346
TspDTI	ATGAA	7 cut(s)	974, 1108, 1121, 1279, 1417, 1901, 2188
TspRI	CASTG	5 cut(s)	222, 268, 289, 1371, 1674
Vha464I	CTTAAG	1 cut(s)	14
VpaK11BI	GGWCC	6 cut(s)	847, 1001, 1066, 1548, 1947, 2171
XapI	RAATTY	3 cut(s)	389, 1083, 2177
XhoI	CTCGAG	1 cut(s)	1146
XmiI	GTMKAC	1 cut(s)	153
XmnI	GAANNNNTTC	1 cut(s)	1141
XspI	CTAG	4 cut(s)	785, 836, 1133, 1779
Zsp2I	ATGCAT	1 cut(s)	1729

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.