Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001268

Physical Location & Seq

Genomic Coordinates Reverse (-)

11339062 .. 11344096

Gene Structure 5035 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0131300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGAGAAGCTGAGAGCCACCGGTCGTTTTCTCAGAAACTCACCCAAAGTTTCAGTCTTTAATTCCGGCAAGTCAATCCACAGCTCCGCTTCAGGTTATGGGAATGGCTTTGGCAAGAAATGCAGAGATGATGTTACGCGCAAGTGGAATGTTAGGACATGTTTTGGCTTGTATGGATATCAGGGGAAAAATTTCAGGGATTGTATGGAAAGGGGTGTTCTTGAGGATACAAGGAGAAGAATCCAGCATCGAGGTTTTGGTTCGCTGCCCGAGAAGGTGCAGAGGAATGCTTCTTTTTCGACGTTGAATTCTGATGATATTAGCTATTTCAAGGGGATATTAGGTGAGAAGAATGTAGTTGAGGATGAAGAGAGGCTGGCTATTGCTAATACAGATTGGATGCACAAGTACAGAGGCTCTAGTAAGCTTCTGCTGCATCCCCGGTCCACTGAGGAGGTCTCACAGATTCTTAAATACTGTAATTCCAGAAACTTGGCTGTTGTTCCTCAAGGTGGAAATACTGGTCTTGTGGGCGGAAGTGTTCCTGTTTTTGATGAAGTGGTTGTCAATATGAGTTTGATGAATAACGTAATATCTTTTGACAAGGTGAGTGGTATACTCGTATGCGAGGCAGGATGCATATTGGAAAATCTGATTACTTTCTTGGATAACCAAGGATTTATTATGCCACTGGACTTAGGTGCGAAAGGAAGCTGCCAGATTGGTGGAAACGTTTCAACCAATGCGGGTGGTTTGCGCCTTGTGCGCTATGGATCACTTCATGGAACCGTACTTGGTCTGGAAGTTGTTTTGGCTAATGGTGATGTTCTTGACATGCTTGGGACTTTACGGAAAGATAATACTGGATATGACCTAAAGCATTTGTTCATAGGAAGTGAAGGATCTTTGGGAATTGTGACCAAGGTTTCCATACTTACCCCTCCAAAGTTATTTTCAGTGAATGTAGCTTTCCTCGCATGCCAAGACTACTTTAGCTGCCAGAAACTTCTAGTGGAAGCAAAGAGAAAACTTGGGGAGATTCTATCTGCTTTTGAATTCTTGGATAGCCATGCTCTGGATTTGGTTCTGAATCATTTGGATGGCGTTCGCAATCCATTACCTCCCACAATTCACAACTTTTATGTTTTGATTGAGACAACGGGCAGTGATGAAACTTATGATAGAGAGAAGCTTGAAGCCTTCCTAGTTTATGCCATGGAAGGTGGTTTGATTTCTGATGGAGCTATAGCACAAGACATAAACCAAGCATCAGCATTCTGGTATATACGCGAGGGAGTCCCAGAAGCATTGATGAAAGCTGGTGCTGTTTACAAATATGATTTATCATTACCTGTTGAAAAGATGTACGATCTTGTAGATGAAATGAGAACACGACTTGGTGATTCAGCTAATGTAGTTGGATATGGCCATCTTGGAGATGGCAATCTGCATCTTAATGTTTCAACTCCACAGTATGATGATAAGACTTTGGCACAAATTGAACCCTTTGTTTACGAGTGGACATCTGCGCATCGTGGAAGCATTAGTGCAGAGCATGGCCTTGGACTGATGAAAGCTAATAAGATTTTCTACAGCAAGCCAACTGCTACTGTGAACCTGATGGCTTCCATCAAGAAGATGCTGGACCCAAAAGGAATACTCAACCCCTATAAAGTTCTTCCGCACTCAATTGATTCTCACAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0043170 GO:0044238 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

568

Amino Acids

62.58

Weight (kDa)

6.74

Isoelectric Point (pI)

31.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	143 - 278	5.1e-36	FAD binding domain
FAD-oxidase_C	PF02913	320 - 559	5.9e-60	FAD linked oxidases, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001268)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67090
fragaria_vesca	FvH4_1g16180 FvH4_2g34170 FvH4_2g34170 FvH4_2g34230 FvH4_6g01060 FvH4_6g01061
malus_domestica	MD04G1236800.v1.1 MD04G1236900.v1.1 MD08G1098100.v1.1 MD15G1080600.v1.1 MD15G1285300.v1.1
prunus_persica	Prupe.1G433300_v2.0.a1 Prupe.6G168400_v2.0.a1 Prupe.6G356800_v2.0.a1 Prupe.7G131900_v2.0.a1
pyrus_communis	pycom04g21060 pycom04g21070 pycom08g07990 pycom12g23460 pycom15g07490 pycom15g24800
rosa_chinensis	RchiOBHm_Chr2g0105861 RchiOBHm_Chr2g0105881 RchiOBHm_Chr3g0448571 RchiOBHm_Chr6g0308191
rosa_laevigata	RLG00000010660 RLG00000017466 RLG00000017467 RLG00000025886 RLG00000025888 RLG00000025889 RLG00000025890
rosa_multiflora	Rmu_sc0003116.1_g000043 Rmu_sc0004367.1_g000007 Rmu_sc0004367.1_g000008 Rmu_sc0005706.1_g000016 Rmu_sc0010389.1_g000023
rosa_roxburghii	Rroxscaffold_2G00137780 Rroxscaffold_6G00426820 Rroxscaffold_6G00426860 Rroxscaffold_7G00160370 Rroxscaffold_7G00160460
rosa_rugosa	Rorug02G0131300 Rorug02G0131500 Rorug02G0613500 Rorug02G0613600 Rorug06G0364600
rosa_samantha	Rh2CG186700 Rh3DG013500 Rh6DG475800
rosa_wichuraiana	Rw2G014280 Rw2G014290 Rw3G000970 Rw6G041320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1530
AccB7I	CCANNNNNTGG	1 cut(s)	1075
AccI	GTMKAC	1 cut(s)	616
AccII	CGCG	2 cut(s)	139, 1290
AciI	CCGC	4 cut(s)	87, 534, 746, 1682
AclI	AACGTT	1 cut(s)	732
AclWI	GGATC	2 cut(s)	781, 910
AcoI	YGGCCR	1 cut(s)	1426
AcsI	RAATTY	3 cut(s)	190, 307, 1055
AcuI	CTGAAG	1 cut(s)	75
AfaI	GTAC	3 cut(s)	410, 792, 1367
AfiI	CCNNNNNNNGG	2 cut(s)	512, 1075
AflIII	ACRYGT	1 cut(s)	158
AgeI	ACCGGT	1 cut(s)	20
AgsI	TTSAA	8 cut(s)	307, 331, 738, 1055, 1196, 1358, 1464, 1502
AjuI	GAANNNNNNNTTGG	2 cut(s)	937, 969
Alw26I	GTCTC	2 cut(s)	463, 1148
AlwI	GGATC	2 cut(s)	781, 910
Ama87I	CYCGRG	1 cut(s)	269
AoxI	GGCC	2 cut(s)	1426, 1558
ApeKI	GCWGC	4 cut(s)	265, 433, 714, 996
ApoI	RAATTY	3 cut(s)	190, 307, 1055
ArsI	GACNNNNNNTTYG	2 cut(s)	39, 71
AsiGI	ACCGGT	1 cut(s)	20
Asp700I	GAANNNNTTC	2 cut(s)	191, 733
AspLEI	GCGC	4 cut(s)	141, 759, 768, 1531
AspS9I	GGNCC	2 cut(s)	444, 1645
AsuC2I	CCSGG	1 cut(s)	442
AsuHPI	GGTGA	5 cut(s)	33, 356, 619, 833, 1412
AvaI	CYCGRG	1 cut(s)	269
AvaII	GGWCC	2 cut(s)	444, 1645
BalI	TGGCCA	1 cut(s)	1428
BbvI	GCAGC	4 cut(s)	252, 420, 701, 983
BccI	CCATC	6 cut(s)	1094, 1232, 1433, 1437, 1615, 1637
BciVI	GTATCC	1 cut(s)	220
BcnI	CCSGG	1 cut(s)	442
BcoDI	GTCTC	2 cut(s)	463, 1148
BfaI	CTAG	3 cut(s)	420, 1010, 1205
BfmI	CTRYAG	2 cut(s)	1245, 1591
BfuI	GTATCC	1 cut(s)	220
BisI	GCNGC	4 cut(s)	266, 434, 715, 997
BlsI	GCNGC	4 cut(s)	267, 435, 716, 998
Bme1390I	CCNGG	1 cut(s)	442
Bme18I	GGWCC	2 cut(s)	444, 1645
BmeT110I	CYCGRG	1 cut(s)	269
BmgT120I	GGNCC	2 cut(s)	444, 1645
BmiI	GGNNCC	2 cut(s)	787, 1647
BmrFI	CCNGG	1 cut(s)	442
BmsI	GCATC	8 cut(s)	256, 390, 445, 626, 1277, 1459, 1540, 1629
BplI	GAGNNNNNCTC	2 cut(s)	443, 475
BpuEI	CTTGAG	2 cut(s)	242, 492
BpuMI	CCSGG	1 cut(s)	442
BsaBI	GATNNNNATC	1 cut(s)	1443
BsaI	GGTCTC	1 cut(s)	463
BsaJI	CCNNGG	5 cut(s)	440, 673, 921, 1215, 1561
BsaWI	WCCGGW	1 cut(s)	20
Bsc4I	CCNNNNNNNGG	2 cut(s)	512, 1075
Bse118I	RCCGGY	1 cut(s)	20
Bse1I	ACTGG	3 cut(s)	526, 696, 868
Bse8I	GATNNNNATC	1 cut(s)	1443
BseDI	CCNNGG	5 cut(s)	440, 673, 921, 1215, 1561
BseGI	GGATG	5 cut(s)	370, 405, 436, 641, 1105
BseJI	GATNNNNATC	1 cut(s)	1443
BseLI	CCNNNNNNNGG	2 cut(s)	512, 1075
BseMII	CTCAG	2 cut(s)	46, 441
BseNI	ACTGG	3 cut(s)	526, 696, 868
BseRI	GAGGAG	1 cut(s)	467
BseXI	GCAGC	4 cut(s)	252, 420, 701, 983
BsgI	GTGCAG	2 cut(s)	299, 1569
Bsh1236I	CGCG	2 cut(s)	139, 1290
Bsh1285I	CGRYCG	1 cut(s)	25
BshFI	GGCC	2 cut(s)	1428, 1560
BshTI	ACCGGT	1 cut(s)	20
BsiEI	CGRYCG	1 cut(s)	25
BsiHKCI	CYCGRG	1 cut(s)	269
BsiSI	CCGG	3 cut(s)	21, 66, 442
BslFI	GGGAC	2 cut(s)	856, 1283
BslI	CCNNNNNNNGG	2 cut(s)	512, 1075
BsmAI	GTCTC	2 cut(s)	463, 1148
BsmFI	GGGAC	2 cut(s)	856, 1283
BsmI	GAATGC	2 cut(s)	292, 1274
BsnI	GGCC	2 cut(s)	1428, 1560
Bso31I	GGTCTC	1 cut(s)	463
BsoBI	CYCGRG	1 cut(s)	269
Bsp143I	GATC	3 cut(s)	773, 902, 1369
Bsp19I	CCATGG	1 cut(s)	1215
BspACI	CCGC	4 cut(s)	87, 534, 746, 1682
BspANI	GGCC	2 cut(s)	1428, 1560
BspCNI	CTCAG	2 cut(s)	45, 442
BspFNI	CGCG	2 cut(s)	139, 1290
BspLI	GGNNCC	2 cut(s)	787, 1647
BspPI	GGATC	2 cut(s)	781, 910
BspTNI	GGTCTC	1 cut(s)	463
BsrFI	RCCGGY	1 cut(s)	20
BsrI	ACTGG	3 cut(s)	526, 696, 868
BssAI	RCCGGY	1 cut(s)	20
BssECI	CCNNGG	5 cut(s)	440, 673, 921, 1215, 1561
BssMI	GATC	3 cut(s)	773, 902, 1369
BssNAI	GTATAC	1 cut(s)	617
BssT1I	CCWWGG	4 cut(s)	673, 921, 1215, 1561
Bst1107I	GTATAC	1 cut(s)	617
Bst4CI	ACNGT	4 cut(s)	479, 790, 1473, 1612
Bst6I	CTCTTC	1 cut(s)	363
BstAPI	GCANNNNNTGC	1 cut(s)	120
BstC8I	GCNNGC	3 cut(s)	378, 979, 1598
BstDEI	CTNAG	4 cut(s)	11, 32, 450, 697
BstDSI	CCRYGG	1 cut(s)	1215
BstF5I	GGATG	5 cut(s)	370, 405, 436, 641, 1105
BstFNI	CGCG	2 cut(s)	139, 1290
BstHHI	GCGC	4 cut(s)	141, 759, 768, 1531
BstKTI	GATC	3 cut(s)	776, 905, 1372
BstMAI	GTCTC	2 cut(s)	463, 1148
BstMBI	GATC	3 cut(s)	773, 902, 1369
BstMCI	CGRYCG	1 cut(s)	25
BstMWI	GCNNNNNNNGC	5 cut(s)	120, 433, 763, 765, 974
BstNSI	RCATGY	3 cut(s)	162, 838, 981
BstSCI	CCNGG	1 cut(s)	440
BstSFI	CTRYAG	2 cut(s)	1245, 1591
BstUI	CGCG	2 cut(s)	139, 1290
BstV1I	GCAGC	4 cut(s)	252, 420, 701, 983
BstX2I	RGATCY	1 cut(s)	902
BstXI	CCANNNNNNTGG	2 cut(s)	493, 725
BstYI	RGATCY	1 cut(s)	902
BstZ17I	GTATAC	1 cut(s)	617
BsuI	GTATCC	1 cut(s)	220
BsuRI	GGCC	2 cut(s)	1428, 1560
BtgI	CCRYGG	1 cut(s)	1215
BtsCI	GGATG	5 cut(s)	370, 405, 436, 641, 1105
BtsI	GCAGTG	1 cut(s)	1171
BtsIMutI	CAGTG	4 cut(s)	447, 689, 963, 1171
Cac8I	GCNNGC	3 cut(s)	378, 979, 1598
CfoI	GCGC	4 cut(s)	141, 759, 768, 1531
Cfr10I	RCCGGY	1 cut(s)	20
Cfr13I	GGNCC	2 cut(s)	444, 1645
Csp6I	GTAC	3 cut(s)	409, 791, 1366
CspAI	ACCGGT	1 cut(s)	20
CspCI	CAANNNNNGTGG	4 cut(s)	592, 627, 730, 765
CviAII	CATG	7 cut(s)	159, 782, 835, 978, 1070, 1216, 1556
CviQI	GTAC	3 cut(s)	409, 791, 1366
DdeI	CTNAG	4 cut(s)	11, 32, 450, 697
DpnI	GATC	3 cut(s)	775, 904, 1371
DpnII	GATC	3 cut(s)	773, 902, 1369
EaeI	YGGCCR	1 cut(s)	1426
Eam1104I	CTCTTC	1 cut(s)	363
EarI	CTCTTC	1 cut(s)	363
EciI	GGCGGA	1 cut(s)	549
Eco130I	CCWWGG	4 cut(s)	673, 921, 1215, 1561
Eco31I	GGTCTC	1 cut(s)	463
Eco32I	GATATC	1 cut(s)	179
Eco47I	GGWCC	2 cut(s)	444, 1645
Eco57I	CTGAAG	1 cut(s)	75
Eco88I	CYCGRG	1 cut(s)	269
EcoRI	GAATTC	2 cut(s)	307, 1055
EcoRV	GATATC	1 cut(s)	179
EcoT14I	CCWWGG	4 cut(s)	673, 921, 1215, 1561
EcoT22I	ATGCAT	1 cut(s)	641
ErhI	CCWWGG	4 cut(s)	673, 921, 1215, 1561
FaeI	CATG	7 cut(s)	162, 785, 838, 981, 1073, 1219, 1559
FaqI	GGGAC	2 cut(s)	856, 1283
FatI	CATG	7 cut(s)	158, 781, 834, 977, 1069, 1215, 1555
FauI	CCCGC	1 cut(s)	739
FblI	GTMKAC	1 cut(s)	616
Fnu4HI	GCNGC	4 cut(s)	266, 434, 715, 997
FokI	GGATG	5 cut(s)	377, 412, 423, 648, 1112
Fsp4HI	GCNGC	4 cut(s)	266, 434, 715, 997
FspBI	CTAG	3 cut(s)	420, 1010, 1205
FspI	TGCGCA	1 cut(s)	1530
GlaI	GCGC	4 cut(s)	140, 758, 767, 1530
GluI	GCNGC	4 cut(s)	266, 434, 715, 997
HaeIII	GGCC	2 cut(s)	1428, 1560
HapII	CCGG	3 cut(s)	21, 66, 442
HhaI	GCGC	4 cut(s)	141, 759, 768, 1531
Hin1II	CATG	7 cut(s)	162, 785, 838, 981, 1073, 1219, 1559
Hin6I	GCGC	4 cut(s)	139, 757, 766, 1529
HinP1I	GCGC	4 cut(s)	139, 757, 766, 1529
HindIII	AAGCTT	2 cut(s)	425, 1190
HinfI	GANTC	7 cut(s)	240, 466, 1039, 1090, 1296, 1403, 1694
HpaII	CCGG	3 cut(s)	21, 66, 442
HphI	GGTGA	5 cut(s)	33, 356, 619, 833, 1412
Hpy166II	GTNNAC	6 cut(s)	447, 617, 1330, 1513, 1521, 1615
Hpy188I	TCNGA	5 cut(s)	35, 313, 654, 1089, 1237
Hpy188III	TCNNGA	6 cut(s)	221, 486, 800, 830, 1076, 1633
Hpy8I	GTNNAC	6 cut(s)	447, 617, 1330, 1513, 1521, 1615
Hpy99I	CGWCG	1 cut(s)	304
HpyAV	CCTTC	4 cut(s)	268, 893, 1210, 1214
HpyCH4III	ACNGT	4 cut(s)	479, 790, 1473, 1612
HpyCH4IV	ACGT	3 cut(s)	302, 588, 732
HpyCH4V	TGCA	7 cut(s)	123, 280, 403, 436, 639, 1450, 1550
HpyF10VI	GCNNNNNNNGC	5 cut(s)	120, 433, 763, 765, 974
HpyF3I	CTNAG	4 cut(s)	11, 32, 450, 697
HpySE526I	ACGT	3 cut(s)	302, 588, 732
Hsp92II	CATG	7 cut(s)	162, 785, 838, 981, 1073, 1219, 1559
HspAI	GCGC	4 cut(s)	139, 757, 766, 1529
Kzo9I	GATC	3 cut(s)	773, 902, 1369
LmnI	GCTCC	2 cut(s)	89, 1241
Lsp1109I	GCAGC	4 cut(s)	252, 420, 701, 983
LweI	GCATC	8 cut(s)	256, 390, 445, 626, 1277, 1459, 1540, 1629
MaeI	CTAG	3 cut(s)	420, 1010, 1205
MaeII	ACGT	3 cut(s)	302, 588, 732
MaeIII	GTNAC	2 cut(s)	133, 916
MalI	GATC	3 cut(s)	775, 904, 1371
MboI	GATC	3 cut(s)	773, 902, 1369
MboII	GAAGA	5 cut(s)	249, 361, 380, 1648, 1670
MfeI	CAATTG	1 cut(s)	1689
MflI	RGATCY	1 cut(s)	902
MlsI	TGGCCA	1 cut(s)	1428
MluCI	AATT	9 cut(s)	61, 190, 307, 481, 912, 1055, 1128, 1497, 1689
MluNI	TGGCCA	1 cut(s)	1428
MlyI	GAGTC	1 cut(s)	1305
MmeI	TCCRAC	1 cut(s)	1399
Mox20I	TGGCCA	1 cut(s)	1428
Mph1103I	ATGCAT	1 cut(s)	641
MroXI	GAANNNNTTC	2 cut(s)	191, 733
MscI	TGGCCA	1 cut(s)	1428
MseI	TTAA	3 cut(s)	60, 471, 1455
MslI	CAYNNNNRTG	2 cut(s)	1098, 1455
Msp20I	TGGCCA	1 cut(s)	1428
MspA1I	CMGCKG	1 cut(s)	1704
MspI	CCGG	3 cut(s)	21, 66, 442
MspR9I	CCNGG	1 cut(s)	442
MunI	CAATTG	1 cut(s)	1689
Mva1269I	GAATGC	2 cut(s)	292, 1274
MvnI	CGCG	2 cut(s)	139, 1290
MwoI	GCNNNNNNNGC	5 cut(s)	120, 433, 763, 765, 974
NciI	CCSGG	1 cut(s)	442
NcoI	CCATGG	1 cut(s)	1215
NdeII	GATC	3 cut(s)	773, 902, 1369
NlaIII	CATG	7 cut(s)	162, 785, 838, 981, 1073, 1219, 1559
NlaIV	GGNNCC	2 cut(s)	787, 1647
NmuCI	GTSAC	1 cut(s)	916
NsbI	TGCGCA	1 cut(s)	1530
NsiI	ATGCAT	1 cut(s)	641
NspI	RCATGY	3 cut(s)	162, 838, 981
PaeI	GCATGC	1 cut(s)	981
PciI	ACATGT	1 cut(s)	158
PctI	GAATGC	2 cut(s)	292, 1274
PdmI	GAANNNNTTC	2 cut(s)	191, 733
PfeI	GAWTC	6 cut(s)	240, 466, 1039, 1090, 1403, 1694
PflMI	CCANNNNNTGG	1 cut(s)	1075
PinAI	ACCGGT	1 cut(s)	20
PkrI	GCNGC	4 cut(s)	267, 435, 716, 998
PleI	GAGTC	1 cut(s)	1304
PpsI	GAGTC	1 cut(s)	1304
PscI	ACATGT	1 cut(s)	158
Psp1406I	AACGTT	1 cut(s)	732
PspN4I	GGNNCC	2 cut(s)	787, 1647
PspPI	GGNCC	2 cut(s)	444, 1645
PsuI	RGATCY	1 cut(s)	902
PvuII	CAGCTG	1 cut(s)	1704
RsaI	GTAC	3 cut(s)	410, 792, 1367
RsaNI	GTAC	3 cut(s)	409, 791, 1366
RseI	CAYNNNNRTG	2 cut(s)	1098, 1455
SaqAI	TTAA	3 cut(s)	60, 471, 1455
SatI	GCNGC	4 cut(s)	266, 434, 715, 997
Sau3AI	GATC	3 cut(s)	773, 902, 1369
Sau96I	GGNCC	2 cut(s)	444, 1645
SchI	GAGTC	1 cut(s)	1305
ScrFI	CCNGG	1 cut(s)	442
SfaNI	GCATC	8 cut(s)	256, 390, 445, 626, 1277, 1459, 1540, 1629
SfcI	CTRYAG	2 cut(s)	1245, 1591
SinI	GGWCC	2 cut(s)	444, 1645
SmiMI	CAYNNNNRTG	2 cut(s)	1098, 1455
SmlI	CTYRAG	2 cut(s)	221, 507
SmoI	CTYRAG	2 cut(s)	221, 507
SphI	GCATGC	1 cut(s)	981
Sse9I	AATT	9 cut(s)	61, 190, 307, 481, 912, 1055, 1128, 1497, 1689
SsiI	CCGC	4 cut(s)	87, 534, 746, 1682
SspMI	CTAG	3 cut(s)	420, 1010, 1205
StyD4I	CCNGG	1 cut(s)	440
StyI	CCWWGG	4 cut(s)	673, 921, 1215, 1561
TaaI	ACNGT	4 cut(s)	479, 790, 1473, 1612
TaiI	ACGT	3 cut(s)	305, 591, 735
TaqI	TCGA	2 cut(s)	250, 299
TasI	AATT	9 cut(s)	61, 190, 307, 481, 912, 1055, 1128, 1497, 1689
TatI	WGTACW	1 cut(s)	408
TfiI	GAWTC	6 cut(s)	240, 466, 1039, 1090, 1403, 1694
Tru1I	TTAA	3 cut(s)	60, 471, 1455
Tru9I	TTAA	3 cut(s)	60, 471, 1455
TscAI	CASTG	4 cut(s)	454, 696, 963, 1171
TseFI	GTSAC	1 cut(s)	916
TseI	GCWGC	4 cut(s)	265, 433, 714, 996
Tsp45I	GTSAC	1 cut(s)	916
TspDTI	ATGAA	9 cut(s)	381, 570, 596, 770, 877, 1185, 1328, 1395, 1586
TspGWI	ACGGA	1 cut(s)	865
TspRI	CASTG	4 cut(s)	454, 696, 963, 1171
Van91I	CCANNNNNTGG	1 cut(s)	1075
VpaK11BI	GGWCC	2 cut(s)	444, 1645
XapI	RAATTY	3 cut(s)	190, 307, 1055
XceI	RCATGY	3 cut(s)	162, 838, 981
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1436
XmiI	GTMKAC	1 cut(s)	616
XmnI	GAANNNNTTC	2 cut(s)	191, 733
XspI	CTAG	3 cut(s)	420, 1010, 1205
Zsp2I	ATGCAT	1 cut(s)	641

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.