Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0001268

Physical Location & Seq

Genomic Coordinates Reverse (-)

65044390 .. 65046686

Gene Structure 2297 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G041320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2259 bp

ATGGCTACTCATAACCATCATGTTCCCTTGTACTTGTGGCTTTCCATTGTCACAATCTCAAACCTTGCCAAAGTCTCCACCTTGGCTCATGAATCCAACAATTATATCATCCACATGGATTCATCATTTATGCCCAAAGCCTTTGCTGATCACCATTCTTGGTACTTGTCCACTGTAGATTCTGTACTATCCACTTCTTCTATCTCTTCTAAGCTCATTTATAGCTACACTCATGTCTTAAGCGGGTTCAGTGCAAGTCTCTCTGTTCCTGAGCTGGAGGCCTTAAAAACCTCTCCAGGGTACATATCTTCAGTTAGAGACCTGCCGGTAAAACGCGACACGACCCACTCGTCCCAGTTTCTTGGCCTTAACTCCAAGACGGGAGCATGGCCGGTGTCCAATTACGGCAAAGGTACCATTATTGGTGTGGTGGACACCGGGGTTTGGCCAGAAAACGAAAGCTTTAATGACGCTGGAATGTCAGAAATCCCACCAAGATGGAAAGGAGCATGTGAAAGTGGTACACAATTCAGCTCTTCATTGTGCAACAAAAAGCTCATTGGGGCAAGGTTCTTTAACAAAGGAATCGCAGCCCAACAGCCCAATGTGACATTCACCATGAACTCCACAAGGGACACCGACGGTCATGGGACGCACACCTCTTCTACGGCCGCTGGAAACTATGTGGCCGGGGCATCGTGCTTTAATTATGCGCCGGGAACTGCCAGCGGCATGGCGCCTCGGGCTCACGTGGCCATGTACAAGGCTCTGTGGGACGAGGCAGTTGTGGACGGTGTGGATGTCTTATCCCTGTCGTTCGGATTAGATGGCGTTGCGCTATACGAGGACCCTGTTGCCATAGCCACATTCTCAGCCATCGAGAAGGGCGTCTTCGTTTCCACTTCGGCAGGAAATGAAGGACCTTCCTATGGTAGCTTGCATAATGGAATCCCTTGGGTTCTAACAGTTGCAGCTAGTACCATTGATCGTGACTTTCAAGGAACTGCACATCTTGGAAATGGAGAATCCGCCACAGGGATGACTCTTTTTCCGGGGGTTAATTCGTCTTCAACTCCAATCCCAATTGTTTTCGTTAATTCATGTGACAATTTGAAGATGCTGAACAAGGTTGGGAATAAAATCGTGTTGTGCCAGGACAACAATTCACTTGAGGAACAATATGTTGCTGTTCAAGATGCAAATGTTGCCGGAGGTATCTTCATTACCAACAGCACCGACTTGGAATTGTTCCTCCAGAGCCAATTTCCCACACTTTTTTTGAGTCCAAAGGAAGGTGAAACTATCAAAGACTACATCAAGAGCAATTCTAACCCGAAAGTAAGCTTGGAGTTTCAAAAGACACTTCTTGGTGTGAGACCAGCACCGACGGTTACTAGTTACACATCTAGAGGTCCATCTTCCAGCTTCCCCTTTACTCTCAAGCCGGACATTACTGCACCGGGTTCACTAATCCTCGCTGCATGGCCTCGAAACATTTCGGTGGCAACGATTAACAAAAAACAGGTCCTGTATAGTGAATTCAATTTGTTGTCGGGGACATCCATGGCGTGCCCACATGCAGCTGGGTTAGCTGCGCTTGTGAAAGGTGCACATCCTGAATGGAGTCCTGCAGCTATCAGGTCGGCTATGATGACTACGTCGGACATCCTGGATAACACACTTGGTTCCATTAAGGACATTGGTGATCATTTGCTACCGGCTAGTCCTCTGGCCATGGGAGCAGGTCATGTCAATCCCAACAAGGCCCTTAACCCGGGACTCATATATGACGCGACCATAGATGATTACGTAAATCTTCTTTGTGCACTAAACTACACCAAGGAACAAATCCAAACCATCACCAGATCAGCCTCGAACAATTGTTCATCTCCGTCATTAGATCTTAATTACCCTTCGTTCATTGCATTTTTCAATGTCAATGATTCAAAGTCGGGAGTACAAACCACTCAAGAGTTCCGAAGGACGGTGACCAATGTAGGAAAGGGGCAGTCGACATACATTGCAAGTGTGACAGCTGTGAAAGGGTTTGAGGTTGGAGTCGTTCCTAACAATTTGGTTTTCAGAAGGGAGGGGGAGAAGCTGAGCTTTAAGTTGAGTATAAGAGGTGGAAGACTGATGAAAGAGACGGTGGCTTTTGGTTACCTGACTTGGGTGGACACTGAAGGTCAACATATGGTGAGAAGCCCCATTGTGGCCACAAAACTCAGCTCGGATGTACTTGTGTCAAATAACCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 Peptidase_S8

Protein Analysis

752

Amino Acids

80.61

Weight (kDa)

6.37

Isoelectric Point (pI)

33.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	34 - 111	2.3e-14	Peptidase inhibitor I9
Peptidase_S8	PF00082	136 - 554	2.6e-37	Subtilase family
fn3_6	PF17766	634 - 738	1.6e-27	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001268)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67090
fragaria_vesca	FvH4_1g16180 FvH4_2g34170 FvH4_2g34170 FvH4_2g34230 FvH4_6g01060 FvH4_6g01061
malus_domestica	MD04G1236800.v1.1 MD04G1236900.v1.1 MD08G1098100.v1.1 MD15G1080600.v1.1 MD15G1285300.v1.1
prunus_persica	Prupe.1G433300_v2.0.a1 Prupe.6G168400_v2.0.a1 Prupe.6G356800_v2.0.a1 Prupe.7G131900_v2.0.a1
pyrus_communis	pycom04g21060 pycom04g21070 pycom08g07990 pycom12g23460 pycom15g07490 pycom15g24800
rosa_chinensis	RchiOBHm_Chr2g0105861 RchiOBHm_Chr2g0105881 RchiOBHm_Chr3g0448571 RchiOBHm_Chr6g0308191
rosa_laevigata	RLG00000010660 RLG00000017466 RLG00000017467 RLG00000025886 RLG00000025888 RLG00000025889 RLG00000025890
rosa_multiflora	Rmu_sc0003116.1_g000043 Rmu_sc0004367.1_g000007 Rmu_sc0004367.1_g000008 Rmu_sc0005706.1_g000016 Rmu_sc0010389.1_g000023
rosa_roxburghii	Rroxscaffold_2G00137780 Rroxscaffold_6G00426820 Rroxscaffold_6G00426860 Rroxscaffold_7G00160370 Rroxscaffold_7G00160460
rosa_rugosa	Rorug02G0131300 Rorug02G0131500 Rorug02G0613500 Rorug02G0613600 Rorug06G0364600
rosa_samantha	Rh2CG186700 Rh3DG013500 Rh6DG475800
rosa_wichuraiana	Rw2G014280 Rw2G014290 Rw3G000970 Rw6G041320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	349
Acc36I	ACCTGC	2 cut(s)	330, 1733
Acc65I	GGTACC	1 cut(s)	413
AccB1I	GGYRCC	2 cut(s)	413, 736
AccI	GTMKAC	1 cut(s)	2012
AccII	CGCG	2 cut(s)	336, 1793
AciI	CCGC	4 cut(s)	243, 672, 729, 1029
AcoI	YGGCCR	7 cut(s)	389, 446, 669, 687, 753, 1731, 2214
AcsI	RAATTY	1 cut(s)	1538
AcuI	CTGAAG	2 cut(s)	294, 2202
AcvI	CACGTG	1 cut(s)	751
AcyI	GRCGYC	2 cut(s)	737, 888
AfiI	CCNNNNNNNGG	9 cut(s)	297, 444, 929, 1035, 1292, 1774, 1984, 2170, 2212
AflII	CTTAAG	1 cut(s)	238
AgsI	TTSAA	8 cut(s)	998, 1071, 1114, 1193, 1355, 1543, 1933, 1947
AhlI	ACTAGT	1 cut(s)	1394
AjnI	CCWGG	3 cut(s)	295, 1152, 1668
AjuI	GAANNNNNNNTTGG	4 cut(s)	596, 628, 1328, 1360
Alw21I	GWGCWC	2 cut(s)	1612, 1828
Alw26I	GTCTC	5 cut(s)	79, 263, 312, 1369, 2138
Alw44I	GTGCAC	2 cut(s)	1608, 1824
AlwNI	CAGNNNCTG	1 cut(s)	1528
Ama87I	CYCGRG	2 cut(s)	741, 1774
ApaLI	GTGCAC	2 cut(s)	1608, 1824
ApeKI	GCWGC	6 cut(s)	590, 971, 1478, 1580, 1592, 1631
ApoI	RAATTY	1 cut(s)	1538
ArsI	GACNNNNNNTTYG	2 cut(s)	1509, 1541
Asp700I	GAANNNNTTC	1 cut(s)	1495
Asp718I	GGTACC	1 cut(s)	413
AspLEI	GCGC	4 cut(s)	715, 739, 838, 1597
AspS9I	GGNCC	5 cut(s)	847, 920, 1412, 1525, 1765
AsuC2I	CCSGG	7 cut(s)	439, 691, 717, 1053, 1461, 1775, 1776
AsuHPI	GGTGA	7 cut(s)	143, 607, 1307, 1715, 1852, 1999, 2209
AvaI	CYCGRG	2 cut(s)	741, 1774
AvaII	GGWCC	4 cut(s)	847, 920, 1412, 1525
BaeGI	GKGCMC	3 cut(s)	1574, 1612, 1828
BalI	TGGCCA	4 cut(s)	448, 755, 1733, 2216
BanI	GGYRCC	2 cut(s)	413, 736
BanII	GRGCYC	1 cut(s)	748
BbrPI	CACGTG	1 cut(s)	751
BbsI	GAAGAC	3 cut(s)	883, 1059, 2137
Bbv12I	GWGCWC	2 cut(s)	1612, 1828
BbvI	GCAGC	6 cut(s)	602, 983, 1465, 1579, 1592, 1643
BccI	CCATC	6 cut(s)	24, 492, 821, 884, 1423, 1865
BceAI	ACGGC	2 cut(s)	421, 684
BciT130I	CCWGG	3 cut(s)	297, 1154, 1670
BclI	TGATCA	2 cut(s)	148, 1705
BcnI	CCSGG	7 cut(s)	439, 691, 717, 1053, 1461, 1775, 1776
BcoDI	GTCTC	5 cut(s)	79, 263, 312, 1369, 2138
BcuI	ACTAGT	1 cut(s)	1394
BfaI	CTAG	5 cut(s)	975, 1395, 1407, 1722, 2257
BfmI	CTRYAG	2 cut(s)	174, 1629
BfoI	RGCGCY	1 cut(s)	740
BfrI	CTTAAG	1 cut(s)	238
BfuAI	ACCTGC	2 cut(s)	330, 1733
BglII	AGATCT	1 cut(s)	1900
BisI	GCNGC	8 cut(s)	591, 672, 730, 972, 1479, 1581, 1593, 1632
BlpI	GCTNAGC	1 cut(s)	2102
BlsI	GCNGC	8 cut(s)	592, 673, 731, 973, 1480, 1582, 1594, 1633
Bme18I	GGWCC	4 cut(s)	847, 920, 1412, 1525
BmeT110I	CYCGRG	2 cut(s)	741, 1774
BmgT120I	GGNCC	5 cut(s)	847, 920, 1412, 1525, 1765
BmiI	GGNNCC	4 cut(s)	415, 738, 849, 1687
BmrI	ACTGGG	1 cut(s)	349
BmsI	GCATC	3 cut(s)	704, 1107, 1186
BmuI	ACTGGG	1 cut(s)	349
BpiI	GAAGAC	3 cut(s)	883, 1059, 2137
BpmI	CTGGAG	3 cut(s)	279, 296, 1238
Bpu10I	CCTNAGC	1 cut(s)	270
Bpu1102I	GCTNAGC	1 cut(s)	2102
BpuEI	CTTGAG	3 cut(s)	1190, 1424, 1953
BpuMI	CCSGG	7 cut(s)	439, 691, 717, 1053, 1461, 1775, 1776
BsaAI	YACGTR	2 cut(s)	751, 1810
BsaHI	GRCGYC	2 cut(s)	737, 888
BsaI	GGTCTC	2 cut(s)	312, 1369
Bsc4I	CCNNNNNNNGG	9 cut(s)	297, 444, 929, 1035, 1292, 1774, 1984, 2170, 2212
Bse118I	RCCGGY	3 cut(s)	325, 391, 1717
Bse1I	ACTGG	1 cut(s)	355
Bse3DI	GCAATG	2 cut(s)	1920, 2019
BseBI	CCWGG	3 cut(s)	297, 1154, 1670
BseGI	GGATG	7 cut(s)	108, 805, 1044, 1559, 1612, 1665, 2239
BseLI	CCNNNNNNNGG	9 cut(s)	297, 444, 929, 1035, 1292, 1774, 1984, 2170, 2212
BseMI	GCAATG	2 cut(s)	1920, 2019
BseMII	CTCAG	4 cut(s)	261, 885, 2093, 2239
BseNI	ACTGG	1 cut(s)	355
BseSI	GKGCMC	3 cut(s)	1574, 1612, 1828
BseX3I	CGGCCG	1 cut(s)	669
BseXI	GCAGC	6 cut(s)	602, 983, 1465, 1579, 1592, 1643
BseYI	CCCAGC	1 cut(s)	1583
BsgI	GTGCAG	2 cut(s)	990, 1440
Bsh1236I	CGCG	2 cut(s)	336, 1793
Bsh1285I	CGRYCG	1 cut(s)	672
BshNI	GGYRCC	2 cut(s)	413, 736
BsiEI	CGRYCG	1 cut(s)	672
BsiHKAI	GWGCWC	2 cut(s)	1612, 1828
BsiHKCI	CYCGRG	2 cut(s)	741, 1774
BslFI	GGGAC	6 cut(s)	337, 647, 664, 788, 1570, 1791
BslI	CCNNNNNNNGG	9 cut(s)	297, 444, 929, 1035, 1292, 1774, 1984, 2170, 2212
BsmAI	GTCTC	5 cut(s)	79, 263, 312, 1369, 2138
BsmBI	CGTCTC	1 cut(s)	2138
BsmFI	GGGAC	6 cut(s)	337, 647, 664, 788, 1570, 1791
Bso31I	GGTCTC	2 cut(s)	312, 1369
BsoBI	CYCGRG	2 cut(s)	741, 1774
Bsp1286I	GDGCHC	4 cut(s)	748, 1574, 1612, 1828
Bsp1407I	TGTACA	1 cut(s)	759
Bsp143I	GATC	5 cut(s)	148, 985, 1705, 1865, 1900
Bsp1720I	GCTNAGC	1 cut(s)	2102
Bsp19I	CCATGG	2 cut(s)	1563, 1734
BspACI	CCGC	4 cut(s)	243, 672, 729, 1029
BspCNI	CTCAG	4 cut(s)	262, 884, 2094, 2238
BspFNI	CGCG	2 cut(s)	336, 1793
BspHI	TCATGA	1 cut(s)	88
BspLI	GGNNCC	4 cut(s)	415, 738, 849, 1687
BspMAI	CTGCAG	1 cut(s)	1633
BspMI	ACCTGC	2 cut(s)	330, 1733
BspQI	GCTCTTC	1 cut(s)	541
BspT107I	GGYRCC	2 cut(s)	413, 736
BspTI	CTTAAG	1 cut(s)	238
BspTNI	GGTCTC	2 cut(s)	312, 1369
BsrDI	GCAATG	2 cut(s)	1920, 2019
BsrFI	RCCGGY	3 cut(s)	325, 391, 1717
BsrGI	TGTACA	1 cut(s)	759
BsrI	ACTGG	1 cut(s)	355
BssAI	RCCGGY	3 cut(s)	325, 391, 1717
BssMI	GATC	5 cut(s)	148, 985, 1705, 1865, 1900
BssNI	GRCGYC	2 cut(s)	737, 888
BssT1I	CCWWGG	5 cut(s)	81, 953, 1563, 1734, 1839
Bst2UI	CCWGG	3 cut(s)	297, 1154, 1670
Bst4CI	ACNGT	7 cut(s)	175, 644, 794, 967, 1390, 1987, 2149
Bst6I	CTCTTC	3 cut(s)	211, 541, 667
BstACI	GRCGYC	2 cut(s)	737, 888
BstAFI	CTTAAG	1 cut(s)	238
BstAPI	GCANNNNNTGC	1 cut(s)	1205
BstAUI	TGTACA	1 cut(s)	759
BstBAI	YACGTR	2 cut(s)	751, 1810
BstC8I	GCNNGC	3 cut(s)	727, 938, 1570
BstDEI	CTNAG	5 cut(s)	210, 270, 871, 2102, 2225
BstDSI	CCRYGG	2 cut(s)	1563, 1734
BstEII	GGTNACC	2 cut(s)	1987, 2159
BstF5I	GGATG	7 cut(s)	108, 805, 1044, 1559, 1612, 1665, 2239
BstFNI	CGCG	2 cut(s)	336, 1793
BstH2I	RGCGCY	1 cut(s)	740
BstHHI	GCGC	4 cut(s)	715, 739, 838, 1597
BstKTI	GATC	5 cut(s)	151, 988, 1708, 1868, 1903
BstMAI	GTCTC	5 cut(s)	79, 263, 312, 1369, 2138
BstMBI	GATC	5 cut(s)	148, 985, 1705, 1865, 1900
BstMCI	CGRYCG	1 cut(s)	672
BstMWI	GCNNNNNNNGC	5 cut(s)	743, 752, 1205, 1589, 1739
BstNI	CCWGG	3 cut(s)	297, 1154, 1670
BstNSI	RCATGY	2 cut(s)	513, 1580
BstPI	GGTNACC	2 cut(s)	1987, 2159
BstSFI	CTRYAG	2 cut(s)	174, 1629
BstSLI	GKGCMC	3 cut(s)	1574, 1612, 1828
BstSNI	TACGTA	1 cut(s)	1810
BstUI	CGCG	2 cut(s)	336, 1793
BstV1I	GCAGC	6 cut(s)	602, 983, 1465, 1579, 1592, 1643
BstV2I	GAAGAC	3 cut(s)	883, 1059, 2137
BstX2I	RGATCY	1 cut(s)	1900
BstXI	CCANNNNNNTGG	3 cut(s)	362, 498, 733
BstYI	RGATCY	1 cut(s)	1900
BstZI	CGGCCG	1 cut(s)	669
BtgI	CCRYGG	2 cut(s)	1563, 1734
BtsCI	GGATG	7 cut(s)	108, 805, 1044, 1559, 1612, 1665, 2239
BtsIMutI	CAGTG	3 cut(s)	171, 256, 2178
BveI	ACCTGC	2 cut(s)	330, 1733
Cac8I	GCNNGC	3 cut(s)	727, 938, 1570
CaiI	CAGNNNCTG	1 cut(s)	1528
CciI	TCATGA	1 cut(s)	88
CfoI	GCGC	4 cut(s)	715, 739, 838, 1597
Cfr10I	RCCGGY	3 cut(s)	325, 391, 1717
Cfr13I	GGNCC	5 cut(s)	847, 920, 1412, 1525, 1765
Cfr9I	CCCGGG	1 cut(s)	1774
CseI	GACGC	4 cut(s)	479, 661, 877, 1799
DdeI	CTNAG	5 cut(s)	210, 270, 871, 2102, 2225
DinI	GGCGCC	1 cut(s)	738
DpnI	GATC	5 cut(s)	150, 987, 1707, 1867, 1902
DpnII	GATC	5 cut(s)	148, 985, 1705, 1865, 1900
DrdI	GACNNNNNNGTC	1 cut(s)	349
DseDI	GACNNNNNNGTC	1 cut(s)	349
EaeI	YGGCCR	7 cut(s)	389, 446, 669, 687, 753, 1731, 2214
EagI	CGGCCG	1 cut(s)	669
Eam1104I	CTCTTC	3 cut(s)	211, 541, 667
EarI	CTCTTC	3 cut(s)	211, 541, 667
EciI	GGCGGA	1 cut(s)	1018
EclXI	CGGCCG	1 cut(s)	669
Eco105I	TACGTA	1 cut(s)	1810
Eco130I	CCWWGG	5 cut(s)	81, 953, 1563, 1734, 1839
Eco147I	AGGCCT	1 cut(s)	281
Eco24I	GRGCYC	1 cut(s)	748
Eco31I	GGTCTC	2 cut(s)	312, 1369
Eco47I	GGWCC	4 cut(s)	847, 920, 1412, 1525
Eco52I	CGGCCG	1 cut(s)	669
Eco57I	CTGAAG	2 cut(s)	294, 2202
Eco72I	CACGTG	1 cut(s)	751
Eco88I	CYCGRG	2 cut(s)	741, 1774
Eco91I	GGTNACC	2 cut(s)	1987, 2159
EcoO109I	RGGNCCY	4 cut(s)	847, 920, 1525, 1765
EcoO65I	GGTNACC	2 cut(s)	1987, 2159
EcoRI	GAATTC	1 cut(s)	1538
EcoRII	CCWGG	3 cut(s)	295, 1152, 1668
EcoT14I	CCWWGG	5 cut(s)	81, 953, 1563, 1734, 1839
EcoT38I	GRGCYC	1 cut(s)	748
EgeI	GGCGCC	1 cut(s)	738
EheI	GGCGCC	1 cut(s)	738
ErhI	CCWWGG	5 cut(s)	81, 953, 1563, 1734, 1839
Esp3I	CGTCTC	1 cut(s)	2138
FalI	AAGNNNNNCTT	4 cut(s)	875, 907, 2090, 2122
FaqI	GGGAC	6 cut(s)	337, 647, 664, 788, 1570, 1791
FauI	CCCGC	1 cut(s)	236
FauNDI	CATATG	1 cut(s)	2193
FbaI	TGATCA	2 cut(s)	148, 1705
FblI	GTMKAC	1 cut(s)	2012
Fnu4HI	GCNGC	8 cut(s)	591, 672, 730, 972, 1479, 1581, 1593, 1632
FokI	GGATG	7 cut(s)	95, 812, 1051, 1546, 1599, 1652, 2246
FriOI	GRGCYC	1 cut(s)	748
Fsp4HI	GCNGC	8 cut(s)	591, 672, 730, 972, 1479, 1581, 1593, 1632
FspBI	CTAG	5 cut(s)	975, 1395, 1407, 1722, 2257
GlaI	GCGC	4 cut(s)	714, 738, 837, 1596
GluI	GCNGC	8 cut(s)	591, 672, 730, 972, 1479, 1581, 1593, 1632
GsaI	CCCAGC	1 cut(s)	1587
GsuI	CTGGAG	3 cut(s)	279, 296, 1238
HaeII	RGCGCY	1 cut(s)	740
HgaI	GACGC	4 cut(s)	479, 661, 877, 1799
HhaI	GCGC	4 cut(s)	715, 739, 838, 1597
Hin1I	GRCGYC	2 cut(s)	737, 888
Hin6I	GCGC	4 cut(s)	713, 737, 836, 1595
HinP1I	GCGC	4 cut(s)	713, 737, 836, 1595
HincII	GTYRAC	2 cut(s)	2013, 2189
HindII	GTYRAC	2 cut(s)	2013, 2189
HindIII	AAGCTT	2 cut(s)	460, 1342
HphI	GGTGA	7 cut(s)	143, 607, 1307, 1715, 1852, 1999, 2209
Hpy188I	TCNGA	6 cut(s)	484, 821, 1663, 1979, 2084, 2233
Hpy99I	CGWCG	3 cut(s)	644, 1390, 1663
HpyAV	CCTTC	8 cut(s)	877, 911, 933, 1286, 1923, 1974, 2079, 2177
HpyCH4III	ACNGT	7 cut(s)	175, 644, 794, 967, 1390, 1987, 2149
HpyCH4IV	ACGT	3 cut(s)	750, 1658, 1809
HpyF10VI	GCNNNNNNNGC	5 cut(s)	743, 752, 1205, 1589, 1739
HpyF3I	CTNAG	5 cut(s)	210, 270, 871, 2102, 2225
HpySE526I	ACGT	3 cut(s)	750, 1658, 1809
Hsp92I	GRCGYC	2 cut(s)	737, 888
HspAI	GCGC	4 cut(s)	713, 737, 836, 1595
KasI	GGCGCC	1 cut(s)	736
KpnI	GGTACC	1 cut(s)	417
Ksp22I	TGATCA	2 cut(s)	148, 1705
Kzo9I	GATC	5 cut(s)	148, 985, 1705, 1865, 1900
LguI	GCTCTTC	1 cut(s)	541
LmnI	GCTCC	3 cut(s)	383, 506, 1739
Lsp1109I	GCAGC	6 cut(s)	602, 983, 1465, 1579, 1592, 1643
LweI	GCATC	3 cut(s)	704, 1107, 1186
MaeI	CTAG	5 cut(s)	975, 1395, 1407, 1722, 2257
MaeII	ACGT	3 cut(s)	750, 1658, 1809
MaeIII	GTNAC	9 cut(s)	49, 607, 989, 1103, 1390, 1397, 1987, 2029, 2159
MalI	GATC	5 cut(s)	150, 987, 1707, 1867, 1902
MboI	GATC	5 cut(s)	148, 985, 1705, 1865, 1900
MfeI	CAATTG	2 cut(s)	1083, 1879
MflI	RGATCY	1 cut(s)	1900
MhlI	GDGCHC	4 cut(s)	748, 1574, 1612, 1828
MlsI	TGGCCA	4 cut(s)	448, 755, 1733, 2216
MluNI	TGGCCA	4 cut(s)	448, 755, 1733, 2216
Mly113I	GGCGCC	1 cut(s)	737
MlyI	GAGTC	5 cut(s)	1036, 1291, 1633, 1773, 2067
MmeI	TCCRAC	3 cut(s)	120, 1641, 2035
Mox20I	TGGCCA	4 cut(s)	448, 755, 1733, 2216
MroXI	GAANNNNTTC	1 cut(s)	1495
MscI	TGGCCA	4 cut(s)	448, 755, 1733, 2216
MslI	CAYNNNNRTG	4 cut(s)	113, 496, 1037, 1499
Msp20I	TGGCCA	4 cut(s)	448, 755, 1733, 2216
MspA1I	CMGCKG	4 cut(s)	674, 729, 1583, 2036
MspCI	CTTAAG	1 cut(s)	238
MunI	CAATTG	2 cut(s)	1083, 1879
MvaI	CCWGG	3 cut(s)	297, 1154, 1670
MvnI	CGCG	2 cut(s)	336, 1793
MwoI	GCNNNNNNNGC	5 cut(s)	743, 752, 1205, 1589, 1739
NarI	GGCGCC	1 cut(s)	737
NciI	CCSGG	7 cut(s)	439, 691, 717, 1053, 1461, 1775, 1776
NcoI	CCATGG	2 cut(s)	1563, 1734
NdeI	CATATG	1 cut(s)	2193
NdeII	GATC	5 cut(s)	148, 985, 1705, 1865, 1900
NlaIV	GGNNCC	4 cut(s)	415, 738, 849, 1687
NmuCI	GTSAC	6 cut(s)	49, 607, 989, 1103, 1987, 2029
NspI	RCATGY	2 cut(s)	513, 1580
PagI	TCATGA	1 cut(s)	88
PceI	AGGCCT	1 cut(s)	281
PciSI	GCTCTTC	1 cut(s)	541
PcsI	WCGNNNNNNNCGW	3 cut(s)	347, 885, 1505
PdmI	GAANNNNTTC	1 cut(s)	1495
PfeI	GAWTC	7 cut(s)	92, 119, 179, 585, 948, 1025, 1943
PflFI	GACNNNGTC	1 cut(s)	1657
PfoI	TCCNGGA	1 cut(s)	1668
PkrI	GCNGC	8 cut(s)	592, 673, 731, 973, 1480, 1582, 1594, 1633
PleI	GAGTC	5 cut(s)	1036, 1290, 1632, 1773, 2066
PluTI	GGCGCC	1 cut(s)	740
PmaCI	CACGTG	1 cut(s)	751
PmlI	CACGTG	1 cut(s)	751
PpsI	GAGTC	5 cut(s)	1036, 1290, 1632, 1773, 2066
Ppu21I	YACGTR	2 cut(s)	751, 1810
PpuMI	RGGWCCY	3 cut(s)	847, 920, 1525
Psp5II	RGGWCCY	3 cut(s)	847, 920, 1525
Psp6I	CCWGG	3 cut(s)	295, 1152, 1668
PspCI	CACGTG	1 cut(s)	751
PspEI	GGTNACC	2 cut(s)	1987, 2159
PspFI	CCCAGC	1 cut(s)	1583
PspGI	CCWGG	3 cut(s)	295, 1152, 1668
PspN4I	GGNNCC	4 cut(s)	415, 738, 849, 1687
PspPI	GGNCC	5 cut(s)	847, 920, 1412, 1525, 1765
PspPPI	RGGWCCY	3 cut(s)	847, 920, 1525
PstI	CTGCAG	1 cut(s)	1633
PstNI	CAGNNNCTG	1 cut(s)	1528
PsuI	RGATCY	1 cut(s)	1900
PsyI	GACNNNGTC	1 cut(s)	1657
PvuII	CAGCTG	2 cut(s)	1583, 2036
RseI	CAYNNNNRTG	4 cut(s)	113, 496, 1037, 1499
SalI	GTCGAC	1 cut(s)	2011
SapI	GCTCTTC	1 cut(s)	541
SatI	GCNGC	8 cut(s)	591, 672, 730, 972, 1479, 1581, 1593, 1632
Sau3AI	GATC	5 cut(s)	148, 985, 1705, 1865, 1900
Sau96I	GGNCC	5 cut(s)	847, 920, 1412, 1525, 1765
SchI	GAGTC	5 cut(s)	1036, 1291, 1633, 1773, 2067
SduI	GDGCHC	4 cut(s)	748, 1574, 1612, 1828
SfaNI	GCATC	3 cut(s)	704, 1107, 1186
SfcI	CTRYAG	2 cut(s)	174, 1629
SfoI	GGCGCC	1 cut(s)	738
SinI	GGWCC	4 cut(s)	847, 920, 1412, 1525
SmaI	CCCGGG	1 cut(s)	1776
SmiMI	CAYNNNNRTG	4 cut(s)	113, 496, 1037, 1499
SmlI	CTYRAG	4 cut(s)	238, 1169, 1439, 1968
SmoI	CTYRAG	4 cut(s)	238, 1169, 1439, 1968
SnaBI	TACGTA	1 cut(s)	1810
SpeI	ACTAGT	1 cut(s)	1394
SseBI	AGGCCT	1 cut(s)	281
SsiI	CCGC	4 cut(s)	243, 672, 729, 1029
SspDI	GGCGCC	1 cut(s)	736
SspMI	CTAG	5 cut(s)	975, 1395, 1407, 1722, 2257
StuI	AGGCCT	1 cut(s)	281
StyI	CCWWGG	5 cut(s)	81, 953, 1563, 1734, 1839
TaaI	ACNGT	7 cut(s)	175, 644, 794, 967, 1390, 1987, 2149
TaiI	ACGT	3 cut(s)	753, 1661, 1812
TaqI	TCGA	4 cut(s)	879, 1489, 1874, 2012
TatI	WGTACW	5 cut(s)	30, 184, 759, 1957, 2236
TauI	GCSGC	2 cut(s)	674, 732
TfiI	GAWTC	7 cut(s)	92, 119, 179, 585, 948, 1025, 1943
TscAI	CASTG	3 cut(s)	178, 256, 2185
TseFI	GTSAC	6 cut(s)	49, 607, 989, 1103, 1987, 2029
TseI	GCWGC	6 cut(s)	590, 971, 1478, 1580, 1592, 1631
Tsp45I	GTSAC	6 cut(s)	49, 607, 989, 1103, 1987, 2029
TspGWI	ACGGA	1 cut(s)	1881
TspMI	CCCGGG	1 cut(s)	1774
TspRI	CASTG	3 cut(s)	178, 256, 2185
Tth111I	GACNNNGTC	1 cut(s)	1657
Vha464I	CTTAAG	1 cut(s)	238
VneI	GTGCAC	2 cut(s)	1608, 1824
VpaK11BI	GGWCC	4 cut(s)	847, 920, 1412, 1525
XapI	RAATTY	1 cut(s)	1538
XbaI	TCTAGA	1 cut(s)	1406
XceI	RCATGY	2 cut(s)	513, 1580
XcmI	CCANNNNNNNNNTGG	1 cut(s)	424
XmaI	CCCGGG	1 cut(s)	1774
XmiI	GTMKAC	1 cut(s)	2012
XmnI	GAANNNNTTC	1 cut(s)	1495
XspI	CTAG	5 cut(s)	975, 1395, 1407, 1722, 2257

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.