Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0001268

Physical Location & Seq

Genomic Coordinates Forward (+)

4578813 .. 4581110

Gene Structure 2298 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g07490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGACTAGTTACTATCATGTTTCCTTGTATTTTTGGCTTTCCATTGCCACCATCTCACACCTCGCAATTGTCTCAACCTTTGCTCAATCCCAAAACTATATCATCCACATGGATTCATCAGTGATGCCTAAAGCCTTTTCTGATCACCATTCATGGTACTTGGCAACGTTAGACTCCGCATTAGGCAAGTTTACCCCTAGCACCACTGCGACCTCCTCCTCCTCCGCCCTCTCTTCCAAACTCATTTATAGTTATACTCATGCCATGAATGGTTTCAGTGCAAGTCTCACTGCTTCCGAGCTTGAGGCCTTAAAAAGCTCTCCAGGCTACATTTCTTCAGTGAAAGACTTGCCAGTAAAAAAAGACACAACTCACACCTCCCAGTTTCTTGGCCTCAACTCCAAATCCGGAGCGTGGCCAGTTGCGAATTACGGCAAAGACGTGATCATCGGGTTGGTGGACACGGGCGTTTGGCCAGAAAGTGAAAGCTTTAACGAAGATGGAATGTCAAAAATCCCACCAAGATGGAAAGGAGAATGTGAAAGTGGCACCCAATTCCACTCCTCATTGTGCAACAAAAAGCTTATTGGGGCAAAGTTCTTTAACAAAGGGCTCGTTGCCCAGAATCCCAATTTGACCATTGAGGTGAATTCAACGAGGGACACTGACGGGCATGGGACCCACACCTCGTCTACGGCCGCAGGAAATTATGTGGCCGGGGCATCATTTTTTGGTTACGCCCCAGGAACTGCCAGTGGCATGGCTCCTAGAGCGCATGTGGCCATGTACAAGGCTTTTTGGGATGAGGGAGCATTGTCTTCCGATATAATTGCTGCCATTGAGCAAGCAATTATAGACGGTGTGGATGTTTTGTCCTTGTCATTTGGGTTTGATGGTGTTCATTTGTATGAGGATCCTGTTGCCATAGCAACATTTTCTGCCTTGGAGAGAGGTGTTTTTGTGTCCACATCGGCAGGAAATGAGGGTCCTTTATTTGGTACCTTGCACAATGGTATCCCTTGGGTTCTCACGGTTGCAGCAGGTACAATTGATCGGGAATTCAAAGGAACTGCGCATCATGGAAATGGAAACTCCGTCACGGGGTCCACGCTCTATCCCGGAAATTCATCTTCAACCCAATTTCCAGTTGTTTTCTTTGATGCGTGTAACAACACAAAAACATTGAAGCAGTTGGGGAAGAAGATCGTCGTGTGCCAGGACAGAAATGATACGTTGTACTATCAAGTTTATAATGTCAGCAGCACAAATGTTGCCGGAGGCATCTTCATTACCAGCAACACAGATTTGGAGTTATTCATCCAAAGCATTTTTCCCGCAATCTTTCTGAGTCCAAAGGAAGGTGAAGTGATCAAAGATTACATCAACAGCAACTCACGGCCAAAAGCAAGCTTGGAGTTTCAAAAGACACTTCTTGGGGCCAAACCAGCACCAAGTGTTACCAGCTACTCGTCTAGAGGGCCTTCCTTTAGCTTCCCCCGGACCTTGAAGCCAGACATTCTGGCCCCAGGGTCGTTAGTCTTGGCTGCATGGCCTCAAAATATCTTCGCGGCCATGGTAGGCAAGAAAGACTTGTTTAGTAATTTTAATCTGTTGTCAGGGACATCCATGTCTTGCCCCCATGTAGCTGGAATAGCGGCGCTTCTGAAAGGTGCAAACCCAGAATGGAGCCCTGCTGCTATTAGATCTGCCATGATGACGACATCAGACATATTGGATAACACGGGTAGCCCCATAAAAGACATCGGTGACGCTTACCAGTCAGCTAGTCCTCTAGCCATCGGAGCTGGGCATGTCAACCCTAACAAAGCCCTAGACCCCGGGCTCATTTACGATGCGAAAATTGAAGATTACGTTAACCTTCTTTGTGCACTCAACTACACCAATAAGCAAATCCAAACCATCACTAAATATGCCTCGAACGACTGTTCAACTCCTTCCTTAGATCTTAACTACCCTTCTTTCATTGCATTCTTCAACTCAAACAAGAGGCACTCGGACGTACAAACGACTCATGAATTCCGGAGGACAGTGACCAACCTAGGAAAGGGGCCATCGACCTACGTTGCCAGCGTGGCACCGTTGAAAGGATTTGTGGTTGGAGTGGTTCCGGAGAAGTTGGAGTTCACGGAGGTGGGTCAGAAGCTGAGCTTTGTGCTGAGTATAAAAGGTCCAAGAGTAATGAAAGAGGCGGTGGTTTTTGGTTCTCTGAGTTGGGTGGAGAGTGAAGGTGAACATGTGGTGAGAAGCCCCGTCGTGGCTTCAAGCCTCATCAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 Peptidase_S8

Protein Analysis

766

Amino Acids

82.02

Weight (kDa)

6.47

Isoelectric Point (pI)

32.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	32 - 120	7.4e-17	Peptidase inhibitor I9
Peptidase_S8	PF00082	145 - 579	3.6e-43	Subtilase family
fn3_6	PF17766	655 - 759	4.9e-25	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001268)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67090
fragaria_vesca	FvH4_1g16180 FvH4_2g34170 FvH4_2g34170 FvH4_2g34230 FvH4_6g01060 FvH4_6g01061
malus_domestica	MD04G1236800.v1.1 MD04G1236900.v1.1 MD08G1098100.v1.1 MD15G1080600.v1.1 MD15G1285300.v1.1
prunus_persica	Prupe.1G433300_v2.0.a1 Prupe.6G168400_v2.0.a1 Prupe.6G356800_v2.0.a1 Prupe.7G131900_v2.0.a1
pyrus_communis	pycom04g21060 pycom04g21070 pycom08g07990 pycom12g23460 pycom15g07490 pycom15g24800
rosa_chinensis	RchiOBHm_Chr2g0105861 RchiOBHm_Chr2g0105881 RchiOBHm_Chr3g0448571 RchiOBHm_Chr6g0308191
rosa_laevigata	RLG00000010660 RLG00000017466 RLG00000017467 RLG00000025886 RLG00000025888 RLG00000025889 RLG00000025890
rosa_multiflora	Rmu_sc0003116.1_g000043 Rmu_sc0004367.1_g000007 Rmu_sc0004367.1_g000008 Rmu_sc0005706.1_g000016 Rmu_sc0010389.1_g000023
rosa_roxburghii	Rroxscaffold_2G00137780 Rroxscaffold_6G00426820 Rroxscaffold_6G00426860 Rroxscaffold_7G00160370 Rroxscaffold_7G00160460
rosa_rugosa	Rorug02G0131300 Rorug02G0131500 Rorug02G0613500 Rorug02G0613600 Rorug06G0364600
rosa_samantha	Rh2CG186700 Rh3DG013500 Rh6DG475800
rosa_wichuraiana	Rw2G014280 Rw2G014290 Rw3G000970 Rw6G041320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1251
AasI	GACNNNNNNGTC	1 cut(s)	1627
Acc16I	TGCGCA	1 cut(s)	1074
Acc36I	ACCTGC	1 cut(s)	1031
Acc65I	GGTACC	1 cut(s)	998
AccB1I	GGYRCC	3 cut(s)	548, 998, 2095
AccI	GTMKAC	1 cut(s)	692
AccII	CGCG	1 cut(s)	1568
AccIII	TCCGGA	3 cut(s)	407, 2040, 2128
AciI	CCGC	7 cut(s)	177, 225, 699, 1335, 1568, 1655, 2210
AclI	AACGTT	1 cut(s)	167
AclWI	GGATC	2 cut(s)	908, 921
AcoI	YGGCCR	7 cut(s)	416, 473, 696, 714, 780, 1397, 1569
AcsI	RAATTY	4 cut(s)	649, 1058, 1123, 2036
AcuI	CTGAAG	1 cut(s)	321
AdeI	CACNNNGTG	1 cut(s)	1454
AfaI	GTAC	6 cut(s)	158, 788, 1000, 1045, 1238, 2022
AfiI	CCNNNNNNNGG	7 cut(s)	414, 995, 1101, 1358, 2065, 2105, 2275
AflIII	ACRYGT	1 cut(s)	2254
AhlI	ACTAGT	1 cut(s)	5
AjiI	CACGTC	1 cut(s)	442
AjnI	CCWGG	4 cut(s)	322, 742, 1215, 1525
AjuI	GAANNNNNNNTTGG	2 cut(s)	1314, 1346
AleI	CACNNNNGTG	1 cut(s)	2150
Alw21I	GWGCWC	1 cut(s)	1891
Alw26I	GTCTC	2 cut(s)	76, 290
Alw44I	GTGCAC	1 cut(s)	1887
AlwI	GGATC	2 cut(s)	908, 921
AlwNI	CAGNNNCTG	2 cut(s)	749, 2164
Ama87I	CYCGRG	1 cut(s)	1838
Aor13HI	TCCGGA	3 cut(s)	407, 2040, 2128
ApaLI	GTGCAC	1 cut(s)	1887
ApeKI	GCWGC	5 cut(s)	833, 1037, 1260, 1544, 1694
ApoI	RAATTY	4 cut(s)	649, 1058, 1123, 2036
Asp700I	GAANNNNTTC	1 cut(s)	272
Asp718I	GGTACC	1 cut(s)	998
AspA2I	CCTAGG	1 cut(s)	2059
AspLEI	GCGC	3 cut(s)	775, 1075, 1660
AspS9I	GGNCC	9 cut(s)	678, 986, 1104, 1437, 1478, 1500, 1522, 2069, 2189
AsuC2I	CCSGG	5 cut(s)	718, 1119, 1498, 1839, 1840
AsuHPI	GGTGA	6 cut(s)	137, 658, 1373, 1778, 2261, 2272
AvaI	CYCGRG	1 cut(s)	1838
AvaII	GGWCC	5 cut(s)	678, 986, 1104, 1500, 2189
AvrII	CCTAGG	1 cut(s)	2059
BaeGI	GKGCMC	1 cut(s)	1891
BaeI	ACNNNNGTAYC	2 cut(s)	997, 1030
BalI	TGGCCA	3 cut(s)	418, 475, 782
BamHI	GGATCC	1 cut(s)	913
BanI	GGYRCC	3 cut(s)	548, 998, 2095
BanII	GRGCYC	3 cut(s)	615, 1691, 1845
BbsI	GAAGAC	1 cut(s)	810
Bbv12I	GWGCWC	1 cut(s)	1891
BbvI	GCAGC	5 cut(s)	820, 1049, 1272, 1531, 1681
BccI	CCATC	7 cut(s)	59, 494, 519, 887, 1805, 1928, 2080
BceAI	ACGGC	3 cut(s)	448, 711, 1412
BcgI	CGANNNNNNTGC	2 cut(s)	812, 846
BciT130I	CCWGG	4 cut(s)	324, 744, 1217, 1527
BciVI	GTATCC	1 cut(s)	1025
BclI	TGATCA	3 cut(s)	142, 444, 1368
BcnI	CCSGG	5 cut(s)	718, 1119, 1498, 1839, 1840
BcoDI	GTCTC	2 cut(s)	76, 290
BcuI	ACTAGT	1 cut(s)	5
BfaI	CTAG	8 cut(s)	6, 198, 768, 1473, 1785, 1793, 1832, 2060
BfoI	RGCGCY	1 cut(s)	1661
BfuAI	ACCTGC	1 cut(s)	1031
BfuI	GTATCC	1 cut(s)	1025
BglI	GCCNNNNNGGC	1 cut(s)	2093
BglII	AGATCT	2 cut(s)	1703, 1963
BisI	GCNGC	8 cut(s)	699, 834, 1038, 1261, 1545, 1569, 1656, 1695
BlnI	CCTAGG	1 cut(s)	2059
BlpI	GCTNAGC	1 cut(s)	2165
BlsI	GCNGC	8 cut(s)	700, 835, 1039, 1262, 1546, 1570, 1657, 1696
Bme1390I	CCNGG	9 cut(s)	324, 718, 744, 1119, 1217, 1498, 1527, 1839, 1840
Bme18I	GGWCC	5 cut(s)	678, 986, 1104, 1500, 2189
BmeT110I	CYCGRG	1 cut(s)	1838
BmgBI	CACGTC	1 cut(s)	442
BmgT120I	GGNCC	9 cut(s)	678, 986, 1104, 1437, 1478, 1500, 1522, 2069, 2189
BmrFI	CCNGG	9 cut(s)	324, 718, 744, 1119, 1217, 1498, 1527, 1839, 1840
BmrI	ACTGGG	1 cut(s)	376
BmsI	GCATC	6 cut(s)	114, 731, 1084, 1150, 1290, 1843
BmuI	ACTGGG	1 cut(s)	376
BpiI	GAAGAC	1 cut(s)	810
BpmI	CTGGAG	1 cut(s)	306
Bpu1102I	GCTNAGC	1 cut(s)	2165
BpuEI	CTTGAG	1 cut(s)	323
BpuMI	CCSGG	5 cut(s)	718, 1119, 1498, 1839, 1840
BsaWI	WCCGGW	3 cut(s)	407, 2040, 2128
Bsc4I	CCNNNNNNNGG	7 cut(s)	414, 995, 1101, 1358, 2065, 2105, 2275
Bse1I	ACTGG	6 cut(s)	353, 382, 419, 753, 1145, 1777
Bse3DI	GCAATG	2 cut(s)	42, 1983
BseAI	TCCGGA	3 cut(s)	407, 2040, 2128
BseBI	CCWGG	4 cut(s)	324, 744, 1217, 1527
BseGI	GGATG	5 cut(s)	102, 808, 871, 1317, 1622
BseLI	CCNNNNNNNGG	7 cut(s)	414, 995, 1101, 1358, 2065, 2105, 2275
BseMI	GCAATG	2 cut(s)	42, 1983
BseMII	CTCAG	4 cut(s)	1337, 2156, 2168, 2219
BseNI	ACTGG	6 cut(s)	353, 382, 419, 753, 1145, 1777
BseRI	GAGGAG	4 cut(s)	205, 208, 211, 553
BseSI	GKGCMC	1 cut(s)	1891
BseX3I	CGGCCG	1 cut(s)	696
BseXI	GCAGC	5 cut(s)	820, 1049, 1272, 1531, 1681
BseYI	CCCAGC	1 cut(s)	1805
Bsh1236I	CGCG	1 cut(s)	1568
Bsh1285I	CGRYCG	1 cut(s)	699
BshNI	GGYRCC	3 cut(s)	548, 998, 2095
BsiEI	CGRYCG	1 cut(s)	699
BsiHKAI	GWGCWC	1 cut(s)	1891
BsiHKCI	CYCGRG	1 cut(s)	1838
BsiSI	CCGG	8 cut(s)	408, 717, 1119, 1275, 1498, 1839, 2041, 2129
BslFI	GGGAC	3 cut(s)	674, 691, 1633
BslI	CCNNNNNNNGG	7 cut(s)	414, 995, 1101, 1358, 2065, 2105, 2275
BsmAI	GTCTC	2 cut(s)	76, 290
BsmFI	GGGAC	3 cut(s)	674, 691, 1633
BsmI	GAATGC	1 cut(s)	1988
BsoBI	CYCGRG	1 cut(s)	1838
Bsp1286I	GDGCHC	4 cut(s)	615, 1691, 1845, 1891
Bsp13I	TCCGGA	3 cut(s)	407, 2040, 2128
Bsp1407I	TGTACA	1 cut(s)	786
Bsp143I	GATC	8 cut(s)	142, 444, 913, 1051, 1203, 1368, 1703, 1963
Bsp1720I	GCTNAGC	1 cut(s)	2165
Bsp19I	CCATGG	1 cut(s)	1572
BspACI	CCGC	7 cut(s)	177, 225, 699, 1335, 1568, 1655, 2210
BspCNI	CTCAG	4 cut(s)	1338, 2157, 2169, 2220
BspEI	TCCGGA	3 cut(s)	407, 2040, 2128
BspFNI	CGCG	1 cut(s)	1568
BspHI	TCATGA	1 cut(s)	2032
BspMI	ACCTGC	1 cut(s)	1031
BspPI	GGATC	2 cut(s)	908, 921
BspT107I	GGYRCC	3 cut(s)	548, 998, 2095
BsrDI	GCAATG	2 cut(s)	42, 1983
BsrGI	TGTACA	1 cut(s)	786
BsrI	ACTGG	6 cut(s)	353, 382, 419, 753, 1145, 1777
BssMI	GATC	8 cut(s)	142, 444, 913, 1051, 1203, 1368, 1703, 1963
BssT1I	CCWWGG	4 cut(s)	942, 1019, 1572, 2059
Bst2UI	CCWGG	4 cut(s)	324, 744, 1217, 1527
Bst4CI	ACNGT	5 cut(s)	860, 1033, 1946, 2050, 2100
Bst6I	CTCTTC	1 cut(s)	238
BstAUI	TGTACA	1 cut(s)	786
BstC8I	GCNNGC	3 cut(s)	846, 1408, 2089
BstDEI	CTNAG	5 cut(s)	1346, 1960, 2165, 2177, 2228
BstDSI	CCRYGG	1 cut(s)	1572
BstENI	CCTNNNNNAGG	1 cut(s)	2063
BstF5I	GGATG	5 cut(s)	102, 808, 871, 1317, 1622
BstFNI	CGCG	1 cut(s)	1568
BstH2I	RGCGCY	1 cut(s)	1661
BstHHI	GCGC	3 cut(s)	775, 1075, 1660
BstKTI	GATC	8 cut(s)	145, 447, 916, 1054, 1206, 1371, 1706, 1966
BstMAI	GTCTC	2 cut(s)	76, 290
BstMBI	GATC	8 cut(s)	142, 444, 913, 1051, 1203, 1368, 1703, 1963
BstMCI	CGRYCG	1 cut(s)	699
BstMWI	GCNNNNNNNGC	7 cut(s)	324, 770, 779, 1445, 1652, 1802, 2093
BstNI	CCWGG	4 cut(s)	324, 744, 1217, 1527
BstNSI	RCATGY	3 cut(s)	779, 1814, 2258
BstSCI	CCNGG	9 cut(s)	322, 716, 742, 1117, 1215, 1496, 1525, 1837, 1838
BstSLI	GKGCMC	1 cut(s)	1891
BstUI	CGCG	1 cut(s)	1568
BstV1I	GCAGC	5 cut(s)	820, 1049, 1272, 1531, 1681
BstV2I	GAAGAC	1 cut(s)	810
BstX2I	RGATCY	3 cut(s)	913, 1703, 1963
BstXI	CCANNNNNNTGG	4 cut(s)	389, 525, 760, 1646
BstYI	RGATCY	3 cut(s)	913, 1703, 1963
BstZI	CGGCCG	1 cut(s)	696
BsuI	GTATCC	1 cut(s)	1025
BtgI	CCRYGG	1 cut(s)	1572
BtrI	CACGTC	1 cut(s)	442
BtsCI	GGATG	5 cut(s)	102, 808, 871, 1317, 1622
BtsI	GCAGTG	2 cut(s)	204, 288
BtsIMutI	CAGTG	8 cut(s)	126, 204, 283, 288, 345, 663, 760, 2055
BveI	ACCTGC	1 cut(s)	1031
Cac8I	GCNNGC	3 cut(s)	846, 1408, 2089
CaiI	CAGNNNCTG	2 cut(s)	749, 2164
CciI	TCATGA	1 cut(s)	2032
CfoI	GCGC	3 cut(s)	775, 1075, 1660
Cfr13I	GGNCC	9 cut(s)	678, 986, 1104, 1437, 1478, 1500, 1522, 2069, 2189
Cfr9I	CCCGGG	1 cut(s)	1838
CseI	GACGC	1 cut(s)	1778
Csp6I	GTAC	6 cut(s)	157, 787, 999, 1044, 1237, 2021
CviQI	GTAC	6 cut(s)	157, 787, 999, 1044, 1237, 2021
DdeI	CTNAG	5 cut(s)	1346, 1960, 2165, 2177, 2228
DpnI	GATC	8 cut(s)	144, 446, 915, 1053, 1205, 1370, 1705, 1965
DpnII	GATC	8 cut(s)	142, 444, 913, 1051, 1203, 1368, 1703, 1963
DraIII	CACNNNGTG	1 cut(s)	1454
DrdI	GACNNNNNNGTC	1 cut(s)	1627
DseDI	GACNNNNNNGTC	1 cut(s)	1627
EaeI	YGGCCR	7 cut(s)	416, 473, 696, 714, 780, 1397, 1569
EagI	CGGCCG	1 cut(s)	696
Eam1104I	CTCTTC	1 cut(s)	238
EarI	CTCTTC	1 cut(s)	238
EciI	GGCGGA	1 cut(s)	214
EclXI	CGGCCG	1 cut(s)	696
Eco130I	CCWWGG	4 cut(s)	942, 1019, 1572, 2059
Eco147I	AGGCCT	1 cut(s)	308
Eco24I	GRGCYC	3 cut(s)	615, 1691, 1845
Eco47I	GGWCC	5 cut(s)	678, 986, 1104, 1500, 2189
Eco52I	CGGCCG	1 cut(s)	696
Eco57I	CTGAAG	1 cut(s)	321
Eco88I	CYCGRG	1 cut(s)	1838
EcoNI	CCTNNNNNAGG	1 cut(s)	2063
EcoO109I	RGGNCCY	3 cut(s)	678, 986, 1478
EcoRI	GAATTC	3 cut(s)	649, 1058, 2036
EcoRII	CCWGG	4 cut(s)	322, 742, 1215, 1525
EcoT14I	CCWWGG	4 cut(s)	942, 1019, 1572, 2059
EcoT38I	GRGCYC	3 cut(s)	615, 1691, 1845
ErhI	CCWWGG	4 cut(s)	942, 1019, 1572, 2059
FalI	AAGNNNNNCTT	4 cut(s)	1574, 1606, 2153, 2185
FaqI	GGGAC	3 cut(s)	674, 691, 1633
FauI	CCCGC	1 cut(s)	1342
FbaI	TGATCA	3 cut(s)	142, 444, 1368
FblI	GTMKAC	1 cut(s)	692
Fnu4HI	GCNGC	8 cut(s)	699, 834, 1038, 1261, 1545, 1569, 1656, 1695
FokI	GGATG	5 cut(s)	89, 815, 878, 1304, 1609
FriOI	GRGCYC	3 cut(s)	615, 1691, 1845
Fsp4HI	GCNGC	8 cut(s)	699, 834, 1038, 1261, 1545, 1569, 1656, 1695
FspBI	CTAG	8 cut(s)	6, 198, 768, 1473, 1785, 1793, 1832, 2060
FspI	TGCGCA	1 cut(s)	1074
GlaI	GCGC	3 cut(s)	774, 1074, 1659
GluI	GCNGC	8 cut(s)	699, 834, 1038, 1261, 1545, 1569, 1656, 1695
GsaI	CCCAGC	1 cut(s)	1809
GsuI	CTGGAG	1 cut(s)	306
HaeII	RGCGCY	1 cut(s)	1661
HapII	CCGG	8 cut(s)	408, 717, 1119, 1275, 1498, 1839, 2041, 2129
HgaI	GACGC	1 cut(s)	1778
HhaI	GCGC	3 cut(s)	775, 1075, 1660
Hin6I	GCGC	3 cut(s)	773, 1073, 1658
HinP1I	GCGC	3 cut(s)	773, 1073, 1658
HincII	GTYRAC	2 cut(s)	1816, 1876
HindII	GTYRAC	2 cut(s)	1816, 1876
HindIII	AAGCTT	3 cut(s)	487, 581, 1408
HinfI	GANTC	5 cut(s)	113, 173, 625, 1348, 2029
HpaI	GTTAAC	1 cut(s)	1876
HpaII	CCGG	8 cut(s)	408, 717, 1119, 1275, 1498, 1839, 2041, 2129
HphI	GGTGA	6 cut(s)	137, 658, 1373, 1778, 2261, 2272
Hpy188III	TCNNGA	6 cut(s)	408, 1055, 1473, 2033, 2041, 2129
Hpy99I	CGWCG	2 cut(s)	1211, 2276
HpyAV	CCTTC	6 cut(s)	1352, 1491, 1889, 1965, 1986, 2240
HpyCH4III	ACNGT	5 cut(s)	860, 1033, 1946, 2050, 2100
HpyCH4IV	ACGT	6 cut(s)	167, 441, 1232, 1872, 2019, 2082
HpyCH4V	TGCA	8 cut(s)	281, 573, 1006, 1037, 1547, 1673, 1889, 1988
HpyF10VI	GCNNNNNNNGC	7 cut(s)	324, 770, 779, 1445, 1652, 1802, 2093
HpyF3I	CTNAG	5 cut(s)	1346, 1960, 2165, 2177, 2228
HpySE526I	ACGT	6 cut(s)	167, 441, 1232, 1872, 2019, 2082
HspAI	GCGC	3 cut(s)	773, 1073, 1658
KflI	GGGWCCC	1 cut(s)	678
Kpn2I	TCCGGA	3 cut(s)	407, 2040, 2128
KpnI	GGTACC	1 cut(s)	1002
Ksp22I	TGATCA	3 cut(s)	142, 444, 1368
KspAI	GTTAAC	1 cut(s)	1876
Kzo9I	GATC	8 cut(s)	142, 444, 913, 1051, 1203, 1368, 1703, 1963
LmnI	GCTCC	5 cut(s)	410, 769, 809, 1686, 1802
Lsp1109I	GCAGC	5 cut(s)	820, 1049, 1272, 1531, 1681
LweI	GCATC	6 cut(s)	114, 731, 1084, 1150, 1290, 1843
MaeI	CTAG	8 cut(s)	6, 198, 768, 1473, 1785, 1793, 1832, 2060
MaeII	ACGT	6 cut(s)	167, 441, 1232, 1872, 2019, 2082
MaeIII	GTNAC	7 cut(s)	8, 734, 1096, 1166, 1456, 1766, 2050
MalI	GATC	8 cut(s)	144, 446, 915, 1053, 1205, 1370, 1705, 1965
MboI	GATC	8 cut(s)	142, 444, 913, 1051, 1203, 1368, 1703, 1963
MfeI	CAATTG	2 cut(s)	66, 1047
MflI	RGATCY	3 cut(s)	913, 1703, 1963
MhlI	GDGCHC	4 cut(s)	615, 1691, 1845, 1891
MlsI	TGGCCA	3 cut(s)	418, 475, 782
MluNI	TGGCCA	3 cut(s)	418, 475, 782
MlyI	GAGTC	3 cut(s)	167, 1357, 2023
MmeI	TCCRAC	2 cut(s)	2098, 2118
Mox20I	TGGCCA	3 cut(s)	418, 475, 782
MroI	TCCGGA	3 cut(s)	407, 2040, 2128
MroXI	GAANNNNTTC	1 cut(s)	272
MscI	TGGCCA	3 cut(s)	418, 475, 782
MseI	TTAA	6 cut(s)	311, 492, 603, 1605, 1875, 1968
MslI	CAYNNNNRTG	6 cut(s)	107, 523, 644, 906, 1083, 2150
Msp20I	TGGCCA	3 cut(s)	418, 475, 782
MspI	CCGG	8 cut(s)	408, 717, 1119, 1275, 1498, 1839, 2041, 2129
MspR9I	CCNGG	9 cut(s)	324, 718, 744, 1119, 1217, 1498, 1527, 1839, 1840
MunI	CAATTG	2 cut(s)	66, 1047
Mva1269I	GAATGC	1 cut(s)	1988
MvaI	CCWGG	4 cut(s)	324, 744, 1217, 1527
MvnI	CGCG	1 cut(s)	1568
MwoI	GCNNNNNNNGC	7 cut(s)	324, 770, 779, 1445, 1652, 1802, 2093
NciI	CCSGG	5 cut(s)	718, 1119, 1498, 1839, 1840
NcoI	CCATGG	1 cut(s)	1572
NdeII	GATC	8 cut(s)	142, 444, 913, 1051, 1203, 1368, 1703, 1963
NmuCI	GTSAC	3 cut(s)	1096, 1766, 2050
NsbI	TGCGCA	1 cut(s)	1074
NspI	RCATGY	3 cut(s)	779, 1814, 2258
OliI	CACNNNNGTG	1 cut(s)	2150
PagI	TCATGA	1 cut(s)	2032
PasI	CCCWGGG	1 cut(s)	1526
PceI	AGGCCT	1 cut(s)	308
PciI	ACATGT	1 cut(s)	2254
PcsI	WCGNNNNNNNCGW	2 cut(s)	438, 2088
PctI	GAATGC	1 cut(s)	1988
PdmI	GAANNNNTTC	1 cut(s)	272
PfeI	GAWTC	2 cut(s)	113, 625
PfoI	TCCNGGA	1 cut(s)	1117
PkrI	GCNGC	8 cut(s)	700, 835, 1039, 1262, 1546, 1570, 1657, 1696
PleI	GAGTC	3 cut(s)	167, 1356, 2023
PpsI	GAGTC	3 cut(s)	167, 1356, 2023
PpuMI	RGGWCCY	2 cut(s)	678, 986
PscI	ACATGT	1 cut(s)	2254
PsiI	TTATAA	1 cut(s)	1251
Psp1406I	AACGTT	1 cut(s)	167
Psp5II	RGGWCCY	2 cut(s)	678, 986
Psp6I	CCWGG	4 cut(s)	322, 742, 1215, 1525
PspFI	CCCAGC	1 cut(s)	1805
PspGI	CCWGG	4 cut(s)	322, 742, 1215, 1525
PspPI	GGNCC	9 cut(s)	678, 986, 1104, 1437, 1478, 1500, 1522, 2069, 2189
PspPPI	RGGWCCY	2 cut(s)	678, 986
PstNI	CAGNNNCTG	2 cut(s)	749, 2164
PsuI	RGATCY	3 cut(s)	913, 1703, 1963
RsaI	GTAC	6 cut(s)	158, 788, 1000, 1045, 1238, 2022
RsaNI	GTAC	6 cut(s)	157, 787, 999, 1044, 1237, 2021
RseI	CAYNNNNRTG	6 cut(s)	107, 523, 644, 906, 1083, 2150
SaqAI	TTAA	6 cut(s)	311, 492, 603, 1605, 1875, 1968
SatI	GCNGC	8 cut(s)	699, 834, 1038, 1261, 1545, 1569, 1656, 1695
Sau3AI	GATC	8 cut(s)	142, 444, 913, 1051, 1203, 1368, 1703, 1963
Sau96I	GGNCC	9 cut(s)	678, 986, 1104, 1437, 1478, 1500, 1522, 2069, 2189
SchI	GAGTC	3 cut(s)	167, 1357, 2023
ScrFI	CCNGG	9 cut(s)	324, 718, 744, 1119, 1217, 1498, 1527, 1839, 1840
SduI	GDGCHC	4 cut(s)	615, 1691, 1845, 1891
SfaNI	GCATC	6 cut(s)	114, 731, 1084, 1150, 1290, 1843
SinI	GGWCC	5 cut(s)	678, 986, 1104, 1500, 2189
SmaI	CCCGGG	1 cut(s)	1840
SmiMI	CAYNNNNRTG	6 cut(s)	107, 523, 644, 906, 1083, 2150
SmlI	CTYRAG	1 cut(s)	302
SmoI	CTYRAG	1 cut(s)	302
SpeI	ACTAGT	1 cut(s)	5
SseBI	AGGCCT	1 cut(s)	308
SsiI	CCGC	7 cut(s)	177, 225, 699, 1335, 1568, 1655, 2210
SspMI	CTAG	8 cut(s)	6, 198, 768, 1473, 1785, 1793, 1832, 2060
StuI	AGGCCT	1 cut(s)	308
StyD4I	CCNGG	9 cut(s)	322, 716, 742, 1117, 1215, 1496, 1525, 1837, 1838
StyI	CCWWGG	4 cut(s)	942, 1019, 1572, 2059
TaaI	ACNGT	5 cut(s)	860, 1033, 1946, 2050, 2100
TaiI	ACGT	6 cut(s)	170, 444, 1235, 1875, 2022, 2085
TaqI	TCGA	2 cut(s)	1937, 2075
TatI	WGTACW	2 cut(s)	786, 1236
TauI	GCSGC	3 cut(s)	701, 1571, 1658
TfiI	GAWTC	2 cut(s)	113, 625
Tru1I	TTAA	6 cut(s)	311, 492, 603, 1605, 1875, 1968
Tru9I	TTAA	6 cut(s)	311, 492, 603, 1605, 1875, 1968
TscAI	CASTG	8 cut(s)	126, 211, 283, 295, 345, 670, 760, 2055
TseFI	GTSAC	3 cut(s)	1096, 1766, 2050
TseI	GCWGC	5 cut(s)	833, 1037, 1260, 1544, 1694
Tsp45I	GTSAC	3 cut(s)	1096, 1766, 2050
TspGWI	ACGGA	2 cut(s)	1084, 2162
TspMI	CCCGGG	1 cut(s)	1838
TspRI	CASTG	8 cut(s)	126, 211, 283, 295, 345, 670, 760, 2055
VneI	GTGCAC	1 cut(s)	1887
VpaK11BI	GGWCC	5 cut(s)	678, 986, 1104, 1500, 2189
XagI	CCTNNNNNAGG	1 cut(s)	2063
XapI	RAATTY	4 cut(s)	649, 1058, 1123, 2036
XbaI	TCTAGA	1 cut(s)	1472
XceI	RCATGY	3 cut(s)	779, 1814, 2258
XmaI	CCCGGG	1 cut(s)	1838
XmaJI	CCTAGG	1 cut(s)	2059
XmiI	GTMKAC	1 cut(s)	692
XmnI	GAANNNNTTC	1 cut(s)	272
XspI	CTAG	8 cut(s)	6, 198, 768, 1473, 1785, 1793, 1832, 2060

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.