Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0001268

Physical Location & Seq

Genomic Coordinates Forward (+)

17281067 .. 17281897

Gene Structure 831 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G168400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 831 bp

ATGGTTATGAAGTCCTCTTCAAGAGGCACTTCATATGGTTTTGCAAGTATTGTGAAGCCAGACATAATGGCACCAGGGTCCTTAATATTGGGAGTCTGGAATCCAAATATATCAGTAGCTGGAATAAGGTCCAATATGTCCTTGTATAGCGACTACTATATACTTTCCGGAACATCTCCTGCTACTGTCCATGTTGCTGGTGTGACTGCTCTTCTAAAAGCTACACATCCAAATTGGAGCCCTGCTGCTCTAAGATCTGCTATTGTAACCACTGCAAACCTATTTGATAATAGTTATAATCGAATTCTTGATGGTAAAAGCTACAGAAAAGCTAACCCTTTAGCCATGGGATTAGGTCTCATCAATCCAAATAAAGCACTTGATCCTGGTTTGATTTATGATGCAACTTCGCACGATTATGTGAATCTATTGTGCTCGTATCTCAATTCAAAGCAGATATCAGAAATTACTAGGTCAAATAATTATAGTTGTGCCAATCCATCCAAGAATCTTAACTACCCATCGTTTATTCTATTATATGGGAATAGTAAGCCAAAAGTTAGGAATTTTGAAAGGATTGTTACAAATGCAGGAAAAGATTCTACAAGGTACAAGGTAGTGGTTAAAACACCAAAAAATATAGTAGTTGTAGTAAGACCAGAGATTTTAGTGTTTGAAAGGAAAAATGAGAAGATATCGTACAATGTCACTTCACAATATACAGGGGGAGAGTATAAGAGAGTTTCATCAAGGAAAATTGTTTGGGTTGAAGAAAATGGAGAACATACAGTTAGGAATCCTATTGTGGTATCACCATGCATAGGTGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 Peptidase_S8

Protein Analysis

277

Amino Acids

30.34

Weight (kDa)

9.7

Isoelectric Point (pI)

35.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001268)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G67090
fragaria_vesca	FvH4_1g16180 FvH4_2g34170 FvH4_2g34170 FvH4_2g34230 FvH4_6g01060 FvH4_6g01061
malus_domestica	MD04G1236800.v1.1 MD04G1236900.v1.1 MD08G1098100.v1.1 MD15G1080600.v1.1 MD15G1285300.v1.1
prunus_persica	Prupe.1G433300_v2.0.a1 Prupe.6G168400_v2.0.a1 Prupe.6G356800_v2.0.a1 Prupe.7G131900_v2.0.a1
pyrus_communis	pycom04g21060 pycom04g21070 pycom08g07990 pycom12g23460 pycom15g07490 pycom15g24800
rosa_chinensis	RchiOBHm_Chr2g0105861 RchiOBHm_Chr2g0105881 RchiOBHm_Chr3g0448571 RchiOBHm_Chr6g0308191
rosa_laevigata	RLG00000010660 RLG00000017466 RLG00000017467 RLG00000025886 RLG00000025888 RLG00000025889 RLG00000025890
rosa_multiflora	Rmu_sc0003116.1_g000043 Rmu_sc0004367.1_g000007 Rmu_sc0004367.1_g000008 Rmu_sc0005706.1_g000016 Rmu_sc0010389.1_g000023
rosa_roxburghii	Rroxscaffold_2G00137780 Rroxscaffold_6G00426820 Rroxscaffold_6G00426860 Rroxscaffold_7G00160370 Rroxscaffold_7G00160460
rosa_rugosa	Rorug02G0131300 Rorug02G0131500 Rorug02G0613500 Rorug02G0613600 Rorug06G0364600
rosa_samantha	Rh2CG186700 Rh3DG013500 Rh6DG475800
rosa_wichuraiana	Rw2G014280 Rw2G014290 Rw3G000970 Rw6G041320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	297
AccB1I	GGYRCC	1 cut(s)	70
AccIII	TCCGGA	1 cut(s)	167
AclWI	GGATC	1 cut(s)	377
AcsI	RAATTY	2 cut(s)	303, 565
AfaI	GTAC	2 cut(s)	611, 701
AfiI	CCNNNNNNNGG	1 cut(s)	821
AgsI	TTSAA	5 cut(s)	21, 450, 572, 677, 770
AjnI	CCWGG	2 cut(s)	73, 385
AluBI	AGCT	4 cut(s)	119, 221, 321, 332
AluI	AGCT	4 cut(s)	119, 221, 321, 332
Alw21I	GWGCWC	1 cut(s)	437
Alw26I	GTCTC	1 cut(s)	362
AlwI	GGATC	1 cut(s)	377
AlwNI	CAGNNNCTG	1 cut(s)	119
Aor13HI	TCCGGA	1 cut(s)	167
ApeKI	GCWGC	1 cut(s)	245
ApoI	RAATTY	2 cut(s)	303, 565
Asp700I	GAANNNNTTC	1 cut(s)	598
AspS9I	GGNCC	2 cut(s)	78, 129
AsuHPI	GGTGA	1 cut(s)	804
AvaII	GGWCC	2 cut(s)	78, 129
BanI	GGYRCC	1 cut(s)	70
BanII	GRGCYC	1 cut(s)	242
BarI	GAAGNNNNNNTAC	2 cut(s)	683, 715
Bbv12I	GWGCWC	1 cut(s)	437
BbvI	GCAGC	1 cut(s)	232
BccI	CCATC	3 cut(s)	305, 508, 529
BciT130I	CCWGG	2 cut(s)	75, 387
BcoDI	GTCTC	1 cut(s)	362
BfaI	CTAG	1 cut(s)	471
BfmI	CTRYAG	1 cut(s)	322
BglII	AGATCT	1 cut(s)	254
BisI	GCNGC	1 cut(s)	246
BlsI	GCNGC	1 cut(s)	247
Bme1390I	CCNGG	2 cut(s)	75, 387
Bme18I	GGWCC	2 cut(s)	78, 129
BmgT120I	GGNCC	2 cut(s)	78, 129
BmiI	GGNNCC	3 cut(s)	72, 79, 239
BmrFI	CCNGG	2 cut(s)	75, 387
BmsI	GCATC	1 cut(s)	391
BsaI	GGTCTC	1 cut(s)	362
BsaJI	CCNNGG	2 cut(s)	74, 345
BsaWI	WCCGGW	1 cut(s)	167
Bsc4I	CCNNNNNNNGG	1 cut(s)	821
BseAI	TCCGGA	1 cut(s)	167
BseBI	CCWGG	2 cut(s)	75, 387
BseDI	CCNNGG	2 cut(s)	74, 345
BseGI	GGATG	2 cut(s)	226, 500
BseLI	CCNNNNNNNGG	1 cut(s)	821
BseXI	GCAGC	1 cut(s)	232
BshNI	GGYRCC	1 cut(s)	70
BsiHKAI	GWGCWC	1 cut(s)	437
BsiSI	CCGG	1 cut(s)	168
BslI	CCNNNNNNNGG	1 cut(s)	821
BsmAI	GTCTC	1 cut(s)	362
Bso31I	GGTCTC	1 cut(s)	362
Bsp1286I	GDGCHC	2 cut(s)	242, 437
Bsp13I	TCCGGA	1 cut(s)	167
Bsp143I	GATC	2 cut(s)	254, 382
Bsp19I	CCATGG	1 cut(s)	345
BspEI	TCCGGA	1 cut(s)	167
BspLI	GGNNCC	3 cut(s)	72, 79, 239
BspPI	GGATC	1 cut(s)	377
BspQI	GCTCTTC	1 cut(s)	216
BspT107I	GGYRCC	1 cut(s)	70
BspTNI	GGTCTC	1 cut(s)	362
BssECI	CCNNGG	2 cut(s)	74, 345
BssMI	GATC	2 cut(s)	254, 382
BssT1I	CCWWGG	1 cut(s)	345
Bst2UI	CCWGG	2 cut(s)	75, 387
Bst4CI	ACNGT	2 cut(s)	187, 790
Bst6I	CTCTTC	2 cut(s)	22, 216
BstDEI	CTNAG	1 cut(s)	251
BstDSI	CCRYGG	1 cut(s)	345
BstF5I	GGATG	2 cut(s)	226, 500
BstKTI	GATC	2 cut(s)	257, 385
BstMAI	GTCTC	1 cut(s)	362
BstMBI	GATC	2 cut(s)	254, 382
BstNI	CCWGG	2 cut(s)	75, 387
BstSCI	CCNGG	2 cut(s)	73, 385
BstSFI	CTRYAG	1 cut(s)	322
BstV1I	GCAGC	1 cut(s)	232
BstX2I	RGATCY	1 cut(s)	254
BstXI	CCANNNNNNTGG	1 cut(s)	197
BstYI	RGATCY	1 cut(s)	254
BtgI	CCRYGG	1 cut(s)	345
BtsCI	GGATG	2 cut(s)	226, 500
BtsI	GCAGTG	1 cut(s)	270
BtsIMutI	CAGTG	1 cut(s)	270
CaiI	CAGNNNCTG	1 cut(s)	119
Cfr13I	GGNCC	2 cut(s)	78, 129
Csp6I	GTAC	2 cut(s)	610, 700
CviAII	CATG	3 cut(s)	191, 346, 816
CviJI	RGCY	8 cut(s)	58, 119, 221, 240, 321, 332, 344, 553
CviKI_1	RGCY	8 cut(s)	58, 119, 221, 240, 321, 332, 344, 553
CviQI	GTAC	2 cut(s)	610, 700
DdeI	CTNAG	1 cut(s)	251
DpnI	GATC	2 cut(s)	256, 384
DpnII	GATC	2 cut(s)	254, 382
Eam1104I	CTCTTC	2 cut(s)	22, 216
EarI	CTCTTC	2 cut(s)	22, 216
Eco130I	CCWWGG	1 cut(s)	345
Eco24I	GRGCYC	1 cut(s)	242
Eco31I	GGTCTC	1 cut(s)	362
Eco32I	GATATC	2 cut(s)	459, 696
Eco47I	GGWCC	2 cut(s)	78, 129
EcoO109I	RGGNCCY	1 cut(s)	78
EcoRI	GAATTC	1 cut(s)	303
EcoRII	CCWGG	2 cut(s)	73, 385
EcoRV	GATATC	2 cut(s)	459, 696
EcoT14I	CCWWGG	1 cut(s)	345
EcoT22I	ATGCAT	1 cut(s)	821
EcoT38I	GRGCYC	1 cut(s)	242
ErhI	CCWWGG	1 cut(s)	345
FaeI	CATG	3 cut(s)	194, 349, 819
FalI	AAGNNNNNCTT	2 cut(s)	13, 45
FatI	CATG	3 cut(s)	190, 345, 815
FauNDI	CATATG	1 cut(s)	34
Fnu4HI	GCNGC	1 cut(s)	246
FokI	GGATG	2 cut(s)	213, 487
FriOI	GRGCYC	1 cut(s)	242
Fsp4HI	GCNGC	1 cut(s)	246
FspBI	CTAG	1 cut(s)	471
GluI	GCNGC	1 cut(s)	246
HapII	CCGG	1 cut(s)	168
Hin1II	CATG	3 cut(s)	194, 349, 819
HinfI	GANTC	6 cut(s)	93, 100, 424, 508, 599, 796
HpaII	CCGG	1 cut(s)	168
HphI	GGTGA	1 cut(s)	804
Hpy188I	TCNGA	1 cut(s)	463
Hpy188III	TCNNGA	4 cut(s)	21, 97, 168, 308
HpyCH4III	ACNGT	2 cut(s)	187, 790
HpyCH4V	TGCA	5 cut(s)	44, 275, 404, 590, 819
HpyF3I	CTNAG	1 cut(s)	251
Hsp92II	CATG	3 cut(s)	194, 349, 819
Kpn2I	TCCGGA	1 cut(s)	167
Kzo9I	GATC	2 cut(s)	254, 382
LguI	GCTCTTC	1 cut(s)	216
LmnI	GCTCC	1 cut(s)	237
Lsp1109I	GCAGC	1 cut(s)	232
LweI	GCATC	1 cut(s)	391
MaeI	CTAG	1 cut(s)	471
MaeIII	GTNAC	4 cut(s)	202, 265, 580, 706
MalI	GATC	2 cut(s)	256, 384
MboI	GATC	2 cut(s)	254, 382
MboII	GAAGA	4 cut(s)	9, 203, 703, 782
MflI	RGATCY	1 cut(s)	254
MhlI	GDGCHC	2 cut(s)	242, 437
MluCI	AATT	7 cut(s)	232, 303, 445, 465, 481, 565, 756
MlyI	GAGTC	1 cut(s)	102
MnlI	CCTC	2 cut(s)	17, 25
Mph1103I	ATGCAT	1 cut(s)	821
MroI	TCCGGA	1 cut(s)	167
MroXI	GAANNNNTTC	1 cut(s)	598
MseI	TTAA	3 cut(s)	83, 513, 624
MslI	CAYNNNNRTG	1 cut(s)	417
MspI	CCGG	1 cut(s)	168
MspR9I	CCNGG	2 cut(s)	75, 387
MvaI	CCWGG	2 cut(s)	75, 387
NcoI	CCATGG	1 cut(s)	345
NdeI	CATATG	1 cut(s)	34
NdeII	GATC	2 cut(s)	254, 382
NlaIII	CATG	3 cut(s)	194, 349, 819
NlaIV	GGNNCC	3 cut(s)	72, 79, 239
NmuCI	GTSAC	2 cut(s)	202, 706
NsiI	ATGCAT	1 cut(s)	821
PciSI	GCTCTTC	1 cut(s)	216
PdmI	GAANNNNTTC	1 cut(s)	598
PfeI	GAWTC	5 cut(s)	100, 424, 508, 599, 796
PkrI	GCNGC	1 cut(s)	247
PleI	GAGTC	1 cut(s)	101
PpsI	GAGTC	1 cut(s)	101
PpuMI	RGGWCCY	1 cut(s)	78
PsiI	TTATAA	1 cut(s)	297
Psp5II	RGGWCCY	1 cut(s)	78
Psp6I	CCWGG	2 cut(s)	73, 385
PspGI	CCWGG	2 cut(s)	73, 385
PspN4I	GGNNCC	3 cut(s)	72, 79, 239
PspPI	GGNCC	2 cut(s)	78, 129
PspPPI	RGGWCCY	1 cut(s)	78
PstNI	CAGNNNCTG	1 cut(s)	119
PsuI	RGATCY	1 cut(s)	254
RsaI	GTAC	2 cut(s)	611, 701
RsaNI	GTAC	2 cut(s)	610, 700
RseI	CAYNNNNRTG	1 cut(s)	417
SapI	GCTCTTC	1 cut(s)	216
SaqAI	TTAA	3 cut(s)	83, 513, 624
SatI	GCNGC	1 cut(s)	246
Sau3AI	GATC	2 cut(s)	254, 382
Sau96I	GGNCC	2 cut(s)	78, 129
SchI	GAGTC	1 cut(s)	102
ScrFI	CCNGG	2 cut(s)	75, 387
SduI	GDGCHC	2 cut(s)	242, 437
SfaNI	GCATC	1 cut(s)	391
SfcI	CTRYAG	1 cut(s)	322
SinI	GGWCC	2 cut(s)	78, 129
SmiMI	CAYNNNNRTG	1 cut(s)	417
Sse9I	AATT	7 cut(s)	232, 303, 445, 465, 481, 565, 756
SspI	AATATT	1 cut(s)	87
SspMI	CTAG	1 cut(s)	471
StyD4I	CCNGG	2 cut(s)	73, 385
StyI	CCWWGG	1 cut(s)	345
TaaI	ACNGT	2 cut(s)	187, 790
TaqI	TCGA	1 cut(s)	301
TasI	AATT	7 cut(s)	232, 303, 445, 465, 481, 565, 756
TfiI	GAWTC	5 cut(s)	100, 424, 508, 599, 796
Tru1I	TTAA	3 cut(s)	83, 513, 624
Tru9I	TTAA	3 cut(s)	83, 513, 624
TscAI	CASTG	1 cut(s)	277
TseFI	GTSAC	2 cut(s)	202, 706
TseI	GCWGC	1 cut(s)	245
Tsp45I	GTSAC	2 cut(s)	202, 706
TspDTI	ATGAA	3 cut(s)	21, 23, 735
TspRI	CASTG	1 cut(s)	277
VpaK11BI	GGWCC	2 cut(s)	78, 129
XapI	RAATTY	2 cut(s)	303, 565
XmnI	GAANNNNTTC	1 cut(s)	598
XspI	CTAG	1 cut(s)	471
Zsp2I	ATGCAT	1 cut(s)	821

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.