Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0001708

Physical Location & Seq

Genomic Coordinates Forward (+)

8500639 .. 8504291

Gene Structure 3653 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g14116.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGTTCAACAAGGTTGATCTCTCTGTTTCCTCATATGACACTGCTTGCGTGGCAATGGTCCCTTCTCCAAATTCTGTAAAGGATCCTTTTTTCCCTGCATGTGTAAATTGGTTATTGGACAATCAACTCCATGATGGCTCATGGGGTCCTCCTGATCTGCATCCACTGTTAACAAAAGATGCTCTCTCATCCACCTTGGCATGTATCCTTGCACTAAAGCGATGGAGTGTCGGTGACGAACAAATTAACAAGGGGCTGCATTTTATCGAGTCAAACATAGCTGCAGCTACTGATGAAGAGAAGCCATCACCTGTTGGGTTTGATATAATATTTTCTGCAATGATTGAATCTGCAATGAGTTTGAATATGAATTTTCTCCAGGGTGGATCAACCTTAAGGGCTTTATTTCACAGGAGAGATTTTGAGCTTAAAAGGAAGAATGGATCTTTGTTTAATTCACCATCAACTACTGCCTCTGCTTTTACTCACACTAAGAATGCTGGTTGTCTTGATTACCTACACACACTCATAGAGAAGTTTGGGAATGCAGTTCCAACAGTTTATCCTCTAGATCACTATGCTCGTCTTTCTATGGTTTCAACTCTTGATAGTTTGGGTATTGATCGACACTTCAGGGAGGAAATAAGGAGTGTACTAGATAAAACATACAGATGCTGGCTGCAGGGGGATGAAGATGTATTTTCAGACGCTGCCACCTGTGCTGTGGCTTTTCGACTCTTACGTGTTGATGGATATGATGTCTCTGCAGATTGGTTGAATCAATTTTCAGAAGACAATTTCTGTGATTCTCTTGGAGGATATTTAAGGGACACTGATGCTGCATTAGAACTGTTTAGGGCATCGCAAGTCATCATACATCCAGATGAATCAGTTCTAGAGAAACAAAACTGCTGGACAAGTAATTTCCTAAAACAGGAGTTTTCTCATAATAAAACTCAGCCTCACAGAGTCAATAAGCTTATTGGCCTAGAGGTGGATGATGCTCTTAAGTTTCCTTCCTATGCAACTTTTAGTCGGTTGTCGAGCAGGAGAGTGATTCTATCTTACAACACCAACAGTACAAGGATTTTAAAATCTTCTTATCGTTGTTTAAATATAGGAAATGAAGACTTCCTAAAACTGGCAGTGGAAGACTACAATATGTGTCAATCGGTATATCAGGAAGAACTCGAGCATCTTTCAAGGTGGGTTGTTGAGAGCAGATTAGACAAGCTAAAATTTGCCAGGCAGAACCTGGCTTTCTGTTATTTCACTGCTGCTGGAATTCTTTTCACTCCTGAACTATCAGATGCTCGTAGGTCATGCACCAAAAATGCGGTACTTGTAACTGTGGTCGATGATTTGTTTGACGTTGGAGGTTCTGAAGAGGAACTGATAAACCTTATACAATTGGTCGAGAAGTGGGATGTGACTCCAAGAGCCGATTCTTGCTCTGAGAATGTTGAAATCATTTTTTCAGCAATTAAGAGCGCAGTGGGTGAGACCGGCATCAATGCATTCGCAAGGCAAGCGCGCGGTGTGACAAATCATGTCATTGAGATGTGGTTGGATTTGCTCAAGGCTATGTTGAAGGAAGCTGAGTGGGTGATCAACAAGTTGGCGCCAACAATGGAGGATTACATGGATAATGCGTACGTCTCATTTGGCATGGGACCTATTATCCTTTCAACTCTCTATCTGGTAGGGCCTAAGCTGTCAGAGGATGCTGTACAGAGTTTGGAATACTACAATCTGTATAGACTAATGAGTACTATTGGGCGTCTTCTCAATGATTTGGTAACCTATAAGAAGGAAGCTGCGGTAGGGAAGCTAAATGCTGTAACATTGGCAGTGATTCATGGAAATGGTAGTGTTACCGAAGAAGAGGCGATCAATGAGACGAAGAGCATCATCACCAGTAAGAGGAGAGAACTGCAAAGACTAGTTTTGCAGGACAAGGATAGTGCAGTTCCAAGAGCTTGCAAGGAATTGTTTTGGAACATGGGAAAAGCTTTGAACCTATTTTATGGAAAGCAGGATGGACACACCTCCCACGACATGATGAAATATGCAAATGAAGTAAATGAAATACCCATCATTCTCAATGAATTGCAAAGTAGAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009899 GO:0009987 GO:0010033 GO:0010333 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

709

Amino Acids

79.77

Weight (kDa)

5.37

Isoelectric Point (pI)

50.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	140 - 325	6.4e-39	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	408 - 643	2.9e-64	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	445 - 643	2.1e-41	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001708)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79460
fragaria_vesca	FvH4_3g14116 FvH4_3g14130 FvH4_3g14131 FvH4_3g16270
malus_domestica	MD03G1187200.v1.1 MD10G1215700.v1.1 MD10G1215900.v1.1 MD10G1216200.v1.1
prunus_persica	Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128600_v2.0.a1 Prupe.4G128700_v2.0.a1
pyrus_communis	pycom03g13990 pycom10g18220
rosa_chinensis	RchiOBHm_Chr5g0023441 RchiOBHm_Chr5g0023471 RchiOBHm_Chr5g0023641
rosa_laevigata	RLG00000032721
rosa_multiflora	Rmu_co8406553.1_g000001 Rmu_sc0004593.1_g000004 Rmu_sc0005664.1_g000001 Rmu_sc0005664.1_g000005
rosa_roxburghii	Rroxscaffold_1G00055600 Rroxscaffold_1G00055620 Rroxscaffold_1G00055910
rosa_rugosa	Rorug05G0079200 Rorug05G0079300
rosa_samantha	Rh5AG166100 Rh5AG166200 Rh5AG166300 Rh5AG167600 Rh5AG168000 Rh5BG165300 Rh5BG165500 Rh5CG180300 Rh5CG180400 Rh5CG181400 Rh5DG166800 Rh5DG166900 Rh5DG167800
rosa_wichuraiana	Rw0G019600 Rw5G014950 Rw5G014970 Rw5G015110 Rw5G015120 Rw5G015210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1621
AccII	CGCG	2 cut(s)	1534, 1536
AciI	CCGC	3 cut(s)	1337, 1536, 1820
AclWI	GGATC	4 cut(s)	77, 90, 394, 451
AcsI	RAATTY	4 cut(s)	70, 370, 1238, 1284
AcuI	CTGAAG	2 cut(s)	616, 1404
AcyI	GRCGYC	2 cut(s)	1622, 1780
AfaI	GTAC	6 cut(s)	654, 1081, 1341, 1655, 1731, 1771
AfiI	CCNNNNNNNGG	4 cut(s)	934, 994, 1141, 1923
AflII	CTTAAG	2 cut(s)	394, 1007
AflIII	ACRYGT	1 cut(s)	742
AhlI	ACTAGT	1 cut(s)	1942
AjnI	CCWGG	3 cut(s)	378, 1244, 1254
AjuI	GAANNNNNNNTTGG	2 cut(s)	1429, 1461
Alw26I	GTCTC	4 cut(s)	766, 1496, 1663, 1892
AlwI	GGATC	4 cut(s)	77, 90, 394, 451
AlwNI	CAGNNNCTG	4 cut(s)	290, 675, 710, 1255
Ama87I	CYCGRG	1 cut(s)	1190
AoxI	GGCC	2 cut(s)	985, 1706
ApeKI	GCWGC	8 cut(s)	256, 281, 284, 679, 710, 839, 1277, 1817
ApoI	RAATTY	4 cut(s)	70, 370, 1238, 1284
Asp700I	GAANNNNTTC	1 cut(s)	891
AspLEI	GCGC	4 cut(s)	1493, 1534, 1536, 1624
AspS9I	GGNCC	4 cut(s)	58, 146, 1673, 1706
AsuHPI	GGTGA	6 cut(s)	245, 300, 450, 1511, 1618, 1906
AvaI	CYCGRG	1 cut(s)	1190
AvaII	GGWCC	3 cut(s)	58, 146, 1673
BamHI	GGATCC	1 cut(s)	82
BanI	GGYRCC	1 cut(s)	1621
BbsI	GAAGAC	4 cut(s)	798, 1134, 1158, 1775
BbvI	GCAGC	8 cut(s)	243, 268, 296, 666, 697, 826, 1264, 1804
BccI	CCATC	7 cut(s)	128, 216, 313, 469, 743, 2033, 2102
BciT130I	CCWGG	3 cut(s)	380, 1246, 1256
BciVI	GTATCC	1 cut(s)	215
BclI	TGATCA	1 cut(s)	1608
BcoDI	GTCTC	4 cut(s)	766, 1496, 1663, 1892
BcuI	ACTAGT	1 cut(s)	1942
BfaI	CTAG	5 cut(s)	569, 656, 896, 989, 1943
BfmI	CTRYAG	3 cut(s)	282, 680, 765
BfoI	RGCGCY	1 cut(s)	1625
BfrI	CTTAAG	2 cut(s)	394, 1007
BfuI	GTATCC	1 cut(s)	215
BisI	GCNGC	8 cut(s)	257, 282, 285, 680, 711, 840, 1278, 1818
BlsI	GCNGC	8 cut(s)	258, 283, 286, 681, 712, 841, 1279, 1819
BmcAI	AGTACT	1 cut(s)	1771
Bme1390I	CCNGG	3 cut(s)	380, 1246, 1256
Bme18I	GGWCC	3 cut(s)	58, 146, 1673
BmeT110I	CYCGRG	1 cut(s)	1190
BmgT120I	GGNCC	4 cut(s)	58, 146, 1673, 1706
BmiI	GGNNCC	5 cut(s)	60, 84, 147, 1623, 1674
BmrFI	CCNGG	3 cut(s)	380, 1246, 1256
BpiI	GAAGAC	4 cut(s)	798, 1134, 1158, 1775
BpmI	CTGGAG	1 cut(s)	362
Bpu10I	CCTNAGC	1 cut(s)	1710
BpuEI	CTTGAG	1 cut(s)	1562
BsaAI	YACGTR	1 cut(s)	743
BsaBI	GATNNNNATC	1 cut(s)	159
BsaHI	GRCGYC	2 cut(s)	1622, 1780
BsaI	GGTCTC	1 cut(s)	1496
BsaJI	CCNNGG	2 cut(s)	195, 379
BsaXI	ACNNNNNCTCC	2 cut(s)	217, 247
Bsc4I	CCNNNNNNNGG	4 cut(s)	934, 994, 1141, 1923
Bse118I	RCCGGY	1 cut(s)	1505
Bse1I	ACTGG	2 cut(s)	1146, 1917
Bse3DI	GCAATG	3 cut(s)	60, 345, 360
Bse8I	GATNNNNATC	1 cut(s)	159
BseBI	CCWGG	3 cut(s)	380, 1246, 1256
BseDI	CCNNGG	2 cut(s)	195, 379
BseGI	GGATG	8 cut(s)	160, 188, 694, 877, 1003, 1432, 1729, 2044
BseJI	GATNNNNATC	1 cut(s)	159
BseLI	CCNNNNNNNGG	4 cut(s)	934, 994, 1141, 1923
BseMI	GCAATG	3 cut(s)	60, 345, 360
BseMII	CTCAG	3 cut(s)	971, 1446, 1590
BseNI	ACTGG	2 cut(s)	1146, 1917
BsePI	GCGCGC	1 cut(s)	1532
BseRI	GAGGAG	1 cut(s)	1939
BseXI	GCAGC	8 cut(s)	243, 268, 296, 666, 697, 826, 1264, 1804
BsgI	GTGCAG	1 cut(s)	1986
Bsh1236I	CGCG	2 cut(s)	1534, 1536
BshFI	GGCC	2 cut(s)	987, 1708
BshNI	GGYRCC	1 cut(s)	1621
BsiHKCI	CYCGRG	1 cut(s)	1190
BsiSI	CCGG	1 cut(s)	1506
BsiWI	CGTACG	1 cut(s)	1653
BslFI	GGGAC	3 cut(s)	44, 842, 1686
BslI	CCNNNNNNNGG	4 cut(s)	934, 994, 1141, 1923
BsmAI	GTCTC	4 cut(s)	766, 1496, 1663, 1892
BsmBI	CGTCTC	2 cut(s)	1663, 1892
BsmFI	GGGAC	3 cut(s)	44, 842, 1686
BsmI	GAATGC	3 cut(s)	502, 550, 1517
BsnI	GGCC	2 cut(s)	987, 1708
Bso31I	GGTCTC	1 cut(s)	1496
BsoBI	CYCGRG	1 cut(s)	1190
Bsp1407I	TGTACA	1 cut(s)	1729
Bsp143I	GATC	9 cut(s)	16, 82, 154, 386, 443, 571, 622, 1608, 1890
BspACI	CCGC	3 cut(s)	1337, 1536, 1820
BspANI	GGCC	2 cut(s)	987, 1708
BspCNI	CTCAG	3 cut(s)	970, 1447, 1591
BspFNI	CGCG	2 cut(s)	1534, 1536
BspLI	GGNNCC	5 cut(s)	60, 84, 147, 1623, 1674
BspMAI	CTGCAG	3 cut(s)	286, 684, 769
BspPI	GGATC	4 cut(s)	77, 90, 394, 451
BspQI	GCTCTTC	1 cut(s)	1898
BspT107I	GGYRCC	1 cut(s)	1621
BspTI	CTTAAG	2 cut(s)	394, 1007
BspTNI	GGTCTC	1 cut(s)	1496
BsrDI	GCAATG	3 cut(s)	60, 345, 360
BsrFI	RCCGGY	1 cut(s)	1505
BsrGI	TGTACA	1 cut(s)	1729
BsrI	ACTGG	2 cut(s)	1146, 1917
BssAI	RCCGGY	1 cut(s)	1505
BssECI	CCNNGG	2 cut(s)	195, 379
BssHII	GCGCGC	1 cut(s)	1532
BssMI	GATC	9 cut(s)	16, 82, 154, 386, 443, 571, 622, 1608, 1890
BssNI	GRCGYC	2 cut(s)	1622, 1780
BssT1I	CCWWGG	1 cut(s)	195
Bst2UI	CCWGG	3 cut(s)	380, 1246, 1256
Bst4CI	ACNGT	5 cut(s)	168, 559, 852, 1079, 1351
Bst6I	CTCTTC	4 cut(s)	291, 1380, 1878, 1898
BstACI	GRCGYC	2 cut(s)	1622, 1780
BstAFI	CTTAAG	2 cut(s)	394, 1007
BstAUI	TGTACA	1 cut(s)	1729
BstBAI	YACGTR	1 cut(s)	743
BstC8I	GCNNGC	5 cut(s)	46, 677, 1530, 1534, 1981
BstDEI	CTNAG	5 cut(s)	492, 957, 1455, 1599, 1710
BstEII	GGTNACC	1 cut(s)	1798
BstENI	CCTNNNNNAGG	1 cut(s)	932
BstF5I	GGATG	8 cut(s)	160, 188, 694, 877, 1003, 1432, 1729, 2044
BstFNI	CGCG	2 cut(s)	1534, 1536
BstH2I	RGCGCY	1 cut(s)	1625
BstHHI	GCGC	4 cut(s)	1493, 1534, 1536, 1624
BstKTI	GATC	9 cut(s)	19, 85, 157, 389, 446, 574, 625, 1611, 1893
BstMAI	GTCTC	4 cut(s)	766, 1496, 1663, 1892
BstMBI	GATC	9 cut(s)	16, 82, 154, 386, 443, 571, 622, 1608, 1890
BstMWI	GCNNNNNNNGC	3 cut(s)	50, 719, 1529
BstNI	CCWGG	3 cut(s)	380, 1246, 1256
BstNSI	RCATGY	2 cut(s)	102, 204
BstPI	GGTNACC	1 cut(s)	1798
BstSCI	CCNGG	3 cut(s)	378, 1244, 1254
BstSFI	CTRYAG	3 cut(s)	282, 680, 765
BstUI	CGCG	2 cut(s)	1534, 1536
BstV1I	GCAGC	8 cut(s)	243, 268, 296, 666, 697, 826, 1264, 1804
BstV2I	GAAGAC	4 cut(s)	798, 1134, 1158, 1775
BstX2I	RGATCY	2 cut(s)	82, 443
BstYI	RGATCY	2 cut(s)	82, 443
BsuI	GTATCC	1 cut(s)	215
BsuRI	GGCC	2 cut(s)	987, 1708
BtgZI	GCGATG	2 cut(s)	235, 846
BtsCI	GGATG	8 cut(s)	160, 188, 694, 877, 1003, 1432, 1729, 2044
BtsI	GCAGTG	5 cut(s)	39, 1152, 1272, 1500, 1857
BtsIMutI	CAGTG	7 cut(s)	39, 164, 831, 1152, 1272, 1500, 1857
Cac8I	GCNNGC	5 cut(s)	46, 677, 1530, 1534, 1981
CaiI	CAGNNNCTG	4 cut(s)	290, 675, 710, 1255
CfoI	GCGC	4 cut(s)	1493, 1534, 1536, 1624
Cfr10I	RCCGGY	1 cut(s)	1505
Cfr13I	GGNCC	4 cut(s)	58, 146, 1673, 1706
CseI	GACGC	2 cut(s)	716, 1769
Csp6I	GTAC	6 cut(s)	653, 1080, 1340, 1654, 1730, 1770
CviQI	GTAC	6 cut(s)	653, 1080, 1340, 1654, 1730, 1770
DdeI	CTNAG	5 cut(s)	492, 957, 1455, 1599, 1710
DinI	GGCGCC	1 cut(s)	1623
DpnI	GATC	9 cut(s)	18, 84, 156, 388, 445, 573, 624, 1610, 1892
DpnII	GATC	9 cut(s)	16, 82, 154, 386, 443, 571, 622, 1608, 1890
DraI	TTTAAA	2 cut(s)	1092, 1113
Eam1104I	CTCTTC	4 cut(s)	291, 1380, 1878, 1898
EarI	CTCTTC	4 cut(s)	291, 1380, 1878, 1898
Eco130I	CCWWGG	1 cut(s)	195
Eco31I	GGTCTC	1 cut(s)	1496
Eco47I	GGWCC	3 cut(s)	58, 146, 1673
Eco57I	CTGAAG	2 cut(s)	616, 1404
Eco88I	CYCGRG	1 cut(s)	1190
Eco91I	GGTNACC	1 cut(s)	1798
EcoNI	CCTNNNNNAGG	1 cut(s)	932
EcoO109I	RGGNCCY	3 cut(s)	146, 1673, 1706
EcoO65I	GGTNACC	1 cut(s)	1798
EcoRI	GAATTC	1 cut(s)	1284
EcoRII	CCWGG	3 cut(s)	378, 1244, 1254
EcoT14I	CCWWGG	1 cut(s)	195
EcoT22I	ATGCAT	1 cut(s)	1519
EgeI	GGCGCC	1 cut(s)	1623
EheI	GGCGCC	1 cut(s)	1623
ErhI	CCWWGG	1 cut(s)	195
Esp3I	CGTCTC	2 cut(s)	1663, 1892
FaqI	GGGAC	3 cut(s)	44, 842, 1686
FauNDI	CATATG	1 cut(s)	34
FbaI	TGATCA	1 cut(s)	1608
Fnu4HI	GCNGC	8 cut(s)	257, 282, 285, 680, 711, 840, 1278, 1818
FokI	GGATG	8 cut(s)	147, 175, 701, 864, 1010, 1439, 1736, 2051
Fsp4HI	GCNGC	8 cut(s)	257, 282, 285, 680, 711, 840, 1278, 1818
FspBI	CTAG	5 cut(s)	569, 656, 896, 989, 1943
GlaI	GCGC	4 cut(s)	1492, 1533, 1535, 1623
GluI	GCNGC	8 cut(s)	257, 282, 285, 680, 711, 840, 1278, 1818
GsuI	CTGGAG	1 cut(s)	362
HaeII	RGCGCY	1 cut(s)	1625
HaeIII	GGCC	2 cut(s)	987, 1708
HapII	CCGG	1 cut(s)	1506
HgaI	GACGC	2 cut(s)	716, 1769
HhaI	GCGC	4 cut(s)	1493, 1534, 1536, 1624
Hin1I	GRCGYC	2 cut(s)	1622, 1780
Hin6I	GCGC	4 cut(s)	1491, 1532, 1534, 1622
HinP1I	GCGC	4 cut(s)	1491, 1532, 1534, 1622
HincII	GTYRAC	1 cut(s)	171
HindII	GTYRAC	1 cut(s)	171
HindIII	AAGCTT	2 cut(s)	977, 2010
HpaI	GTTAAC	1 cut(s)	171
HpaII	CCGG	1 cut(s)	1506
HphI	GGTGA	6 cut(s)	245, 300, 450, 1511, 1618, 1906
Hpy166II	GTNNAC	2 cut(s)	171, 653
Hpy188I	TCNGA	6 cut(s)	706, 790, 1309, 1384, 1456, 1720
Hpy188III	TCNNGA	9 cut(s)	152, 509, 569, 605, 881, 896, 1181, 1298, 1417
Hpy8I	GTNNAC	2 cut(s)	171, 653
HpyAV	CCTTC	4 cut(s)	72, 1026, 1585, 1804
HpyCH4III	ACNGT	5 cut(s)	168, 559, 852, 1079, 1351
HpyCH4IV	ACGT	3 cut(s)	742, 1371, 1656
HpyF10VI	GCNNNNNNNGC	3 cut(s)	50, 719, 1529
HpyF3I	CTNAG	5 cut(s)	492, 957, 1455, 1599, 1710
HpySE526I	ACGT	3 cut(s)	742, 1371, 1656
Hsp92I	GRCGYC	2 cut(s)	1622, 1780
HspAI	GCGC	4 cut(s)	1491, 1532, 1534, 1622
KasI	GGCGCC	1 cut(s)	1621
Ksp22I	TGATCA	1 cut(s)	1608
KspAI	GTTAAC	1 cut(s)	171
Kzo9I	GATC	9 cut(s)	16, 82, 154, 386, 443, 571, 622, 1608, 1890
LguI	GCTCTTC	1 cut(s)	1898
Lsp1109I	GCAGC	8 cut(s)	243, 268, 296, 666, 697, 826, 1264, 1804
MaeI	CTAG	5 cut(s)	569, 656, 896, 989, 1943
MaeII	ACGT	3 cut(s)	742, 1371, 1656
MaeIII	GTNAC	7 cut(s)	233, 1345, 1429, 1540, 1798, 1840, 1873
MalI	GATC	9 cut(s)	18, 84, 156, 388, 445, 573, 624, 1610, 1892
MboI	GATC	9 cut(s)	16, 82, 154, 386, 443, 571, 622, 1608, 1890
MfeI	CAATTG	1 cut(s)	1409
MflI	RGATCY	2 cut(s)	82, 443
Mly113I	GGCGCC	1 cut(s)	1622
MlyI	GAGTC	4 cut(s)	278, 729, 978, 1426
MmeI	TCCRAC	3 cut(s)	578, 1354, 1548
Mph1103I	ATGCAT	1 cut(s)	1519
MroXI	GAANNNNTTC	1 cut(s)	891
MslI	CAYNNNNRTG	4 cut(s)	670, 882, 1559, 1863
MspCI	CTTAAG	2 cut(s)	394, 1007
MspI	CCGG	1 cut(s)	1506
MspR9I	CCNGG	3 cut(s)	380, 1246, 1256
MunI	CAATTG	1 cut(s)	1409
Mva1269I	GAATGC	3 cut(s)	502, 550, 1517
MvaI	CCWGG	3 cut(s)	380, 1246, 1256
MvnI	CGCG	2 cut(s)	1534, 1536
MwoI	GCNNNNNNNGC	3 cut(s)	50, 719, 1529
NarI	GGCGCC	1 cut(s)	1622
NdeI	CATATG	1 cut(s)	34
NdeII	GATC	9 cut(s)	16, 82, 154, 386, 443, 571, 622, 1608, 1890
NlaIV	GGNNCC	5 cut(s)	60, 84, 147, 1623, 1674
NmuCI	GTSAC	3 cut(s)	233, 1429, 1540
NsiI	ATGCAT	1 cut(s)	1519
NspI	RCATGY	2 cut(s)	102, 204
PaeR7I	CTCGAG	1 cut(s)	1190
PauI	GCGCGC	1 cut(s)	1532
PciSI	GCTCTTC	1 cut(s)	1898
PcsI	WCGNNNNNNNCGW	1 cut(s)	739
PctI	GAATGC	3 cut(s)	502, 550, 1517
PdmI	GAANNNNTTC	1 cut(s)	891
PfeI	GAWTC	7 cut(s)	347, 778, 806, 887, 1057, 1445, 1855
Pfl23II	CGTACG	1 cut(s)	1653
PkrI	GCNGC	8 cut(s)	258, 283, 286, 681, 712, 841, 1279, 1819
PleI	GAGTC	4 cut(s)	277, 729, 977, 1426
PluTI	GGCGCC	1 cut(s)	1625
PpsI	GAGTC	4 cut(s)	277, 729, 977, 1426
Ppu21I	YACGTR	1 cut(s)	743
PpuMI	RGGWCCY	2 cut(s)	146, 1673
Psp5II	RGGWCCY	2 cut(s)	146, 1673
Psp6I	CCWGG	3 cut(s)	378, 1244, 1254
PspEI	GGTNACC	1 cut(s)	1798
PspGI	CCWGG	3 cut(s)	378, 1244, 1254
PspLI	CGTACG	1 cut(s)	1653
PspN4I	GGNNCC	5 cut(s)	60, 84, 147, 1623, 1674
PspPI	GGNCC	4 cut(s)	58, 146, 1673, 1706
PspPPI	RGGWCCY	2 cut(s)	146, 1673
PspXI	VCTCGAGB	1 cut(s)	1190
PstI	CTGCAG	3 cut(s)	286, 684, 769
PstNI	CAGNNNCTG	4 cut(s)	290, 675, 710, 1255
PsuI	RGATCY	2 cut(s)	82, 443
PteI	GCGCGC	1 cut(s)	1532
RsaI	GTAC	6 cut(s)	654, 1081, 1341, 1655, 1731, 1771
RsaNI	GTAC	6 cut(s)	653, 1080, 1340, 1654, 1730, 1770
RseI	CAYNNNNRTG	4 cut(s)	670, 882, 1559, 1863
SapI	GCTCTTC	1 cut(s)	1898
SatI	GCNGC	8 cut(s)	257, 282, 285, 680, 711, 840, 1278, 1818
Sau3AI	GATC	9 cut(s)	16, 82, 154, 386, 443, 571, 622, 1608, 1890
Sau96I	GGNCC	4 cut(s)	58, 146, 1673, 1706
ScaI	AGTACT	1 cut(s)	1771
SchI	GAGTC	4 cut(s)	278, 729, 978, 1426
ScrFI	CCNGG	3 cut(s)	380, 1246, 1256
SfcI	CTRYAG	3 cut(s)	282, 680, 765
SfoI	GGCGCC	1 cut(s)	1623
Sfr274I	CTCGAG	1 cut(s)	1190
SinI	GGWCC	3 cut(s)	58, 146, 1673
SlaI	CTCGAG	1 cut(s)	1190
SmiMI	CAYNNNNRTG	4 cut(s)	670, 882, 1559, 1863
SmlI	CTYRAG	4 cut(s)	394, 1007, 1190, 1577
SmoI	CTYRAG	4 cut(s)	394, 1007, 1190, 1577
SpeI	ACTAGT	1 cut(s)	1942
SsiI	CCGC	3 cut(s)	1337, 1536, 1820
SspDI	GGCGCC	1 cut(s)	1621
SspI	AATATT	1 cut(s)	330
SspMI	CTAG	5 cut(s)	569, 656, 896, 989, 1943
StyD4I	CCNGG	3 cut(s)	378, 1244, 1254
StyI	CCWWGG	1 cut(s)	195
TaaI	ACNGT	5 cut(s)	168, 559, 852, 1079, 1351
TaiI	ACGT	3 cut(s)	745, 1374, 1659
TaqI	TCGA	7 cut(s)	267, 625, 733, 1043, 1191, 1356, 1416
TatI	WGTACW	4 cut(s)	652, 1079, 1729, 1769
TfiI	GAWTC	7 cut(s)	347, 778, 806, 887, 1057, 1445, 1855
TscAI	CASTG	7 cut(s)	46, 171, 838, 1152, 1279, 1500, 1857
TseFI	GTSAC	3 cut(s)	233, 1429, 1540
TseI	GCWGC	8 cut(s)	256, 281, 284, 679, 710, 839, 1277, 1817
Tsp45I	GTSAC	3 cut(s)	233, 1429, 1540
TspRI	CASTG	7 cut(s)	46, 171, 838, 1152, 1279, 1500, 1857
Vha464I	CTTAAG	2 cut(s)	394, 1007
VpaK11BI	GGWCC	3 cut(s)	58, 146, 1673
XagI	CCTNNNNNAGG	1 cut(s)	932
XapI	RAATTY	4 cut(s)	70, 370, 1238, 1284
XbaI	TCTAGA	2 cut(s)	568, 895
XceI	RCATGY	2 cut(s)	102, 204
XcmI	CCANNNNNNNNNTGG	2 cut(s)	721, 1252
XhoI	CTCGAG	1 cut(s)	1190
XmnI	GAANNNNTTC	1 cut(s)	891
XspI	CTAG	5 cut(s)	569, 656, 896, 989, 1943
ZrmI	AGTACT	1 cut(s)	1771
Zsp2I	ATGCAT	1 cut(s)	1519

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.