Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00883

Orthogroup ID

OG0001708

Physical Location & Seq

Genomic Coordinates Forward (+)

15341 .. 19596

Gene Structure 4256 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G019600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGTCCTTCTCCCAGCTCAACACTTTCAGGTGTTGCACCTTTTCCCCATCAGGAAAAGATCTTTTGCCACAAGCAGCTTCAATAGTTCCAAGGACAAATGGCACAGCAGAAGTAAATACTGCTGTTTTGAGTTTGGAAGGAACTAAAAAAAGAATAAAGAAGATGTTCAACAAGGTTGATCTCTCTGTTTCATCATATGACACTGCTTGGGTGGCAATGGTCCCTTCTCCAAATTCCGGGAAGGAGCCTTTCTTTCCTGAATGCGTAAAATGGTTGTTAGATAATCAACTTCATGATGGCTCATGGGGTCCTCCTAATCTGCATCAGTTGTTAACAAAAGATGCCCTCTTATCCACGTTAGCATGCGTCCTTGCACTAAAGCGATGGAATATTGGTGAAGAACTAATTGACAAGGGCCTGCATTTTATCGAGTCAAATTTAGCTTCAGCTACTGATGGAGAGCAACCATCTCCTGTTGGGTTTGATATAATATTTCCTTCCATGATTGAATCTGCAATGAATTTGGATGTGAATCTACCTTTGGGAGGATTAACCTTAGATGCTTTACTTCTCCGGAGAGACTTTGAGCTTCAAAGAGGCAACAGAAGCAACTCAGAGGGGTGGAGAGCCTATCTCGCATATATTTCAGAAGGAATCGGAAAGTCACAGGACTGGGAGATGGTCATGAAGTATCAGAAGAAGAATGGGTCCTTGTTTAACTCACCATCAACTACTGCTGCTGCTTTTACTCACCTCAACAATGCTGGTTGTCTTAGTTATCTACGCTCACTCATAGAAAAGTTTGGAAGTGCAGTTCCAACAATTTATCCTCTAGATAACTATGCTCGCCTTTCTATGGTTTCCAGTCTTGAAAGTATGGGTGTTGATCGACATTTCAGGGAGGAAATAAGGAGTGTACTCGATGAAACATACAGATGCTGGCTGCAGGGGGATGAAGATATATTTTCAGATGCTGGCACCTGTGCTATGGCATTTCGACTCTTACGTCTTCATGGATATGATGTTTCTGCAGATCCATTAAGTCAATTTTCAGAAGACAGTTTCTTCAATTCCCTTGGAGGATATCTGAAGGACACTGGTGCTGCCTTGGAACTTTTTAGGGCTTCAGAAGTCATCATTCATCCAGATGAATCAGTTCTAGAGAAACAACATTACTGGACAAGTCATTTCTTGAAACAGGAATTATCAAATAACTTAACTCAGGCTCATAAACTCAATAAGCATATTGATCAGGTGGATGATGCTCTTCGGTTTCCTTCCTATGCAACTCTGGGTTGGTTATCAAGCAGGAAAGCAATAAAATATTACAACACTGATAGTACAAAGATTTTAAAATCTTCTTATCGTTGTTCAAATGTTGGGAATGAAGACTTCCTAAAACTGGCAGTGGAAGACTTCAATATGTGTCAATCGATACATCGGGAAGAACTCGAGTATCTTTCAAGGTGGGTTGTTGAGAGCAGATTAGACAAGCTAGAATTTGCTAGGCAGAAGCTGGCATACTGTTACTTCTCTGCTGCTGCAACCCTTTTCCCTCCTGAACTATCAGATGCCCGCATATCATGGGCCAAAAACGGAGTGCTTACAACTGTGGTTGATGATTTTTTTGACGTTGGAGGTTCTGAAGAGGAACTAGTAAACCTTATACAATTGATCGAGAAGTGGGATGTGAATGCAAAAACTGATTCTTGTTCTGAGCAAGTTGAAATCATATTTTCAGCAATTAAGAGCACAATTAATGAGATTGGAGCCAATGCATTCCCACGGCAACAGCGCAGTGTAACAAATCACGTCATAGAGATTGTAAGATGGAATCTTTTTAATTTGTCCATGTTATCATTGTTCTATCTATTGATCGAGTACCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009899 GO:0009987 GO:0010033 GO:0010333 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

629

Amino Acids

71.01

Weight (kDa)

5.3

Isoelectric Point (pI)

51.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	224 - 418	4.6e-43	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	495 - 609	1.3e-33	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	533 - 609	9.5e-10	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001708)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79460
fragaria_vesca	FvH4_3g14116 FvH4_3g14130 FvH4_3g14131 FvH4_3g16270
malus_domestica	MD03G1187200.v1.1 MD10G1215700.v1.1 MD10G1215900.v1.1 MD10G1216200.v1.1
prunus_persica	Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128600_v2.0.a1 Prupe.4G128700_v2.0.a1
pyrus_communis	pycom03g13990 pycom10g18220
rosa_chinensis	RchiOBHm_Chr5g0023441 RchiOBHm_Chr5g0023471 RchiOBHm_Chr5g0023641
rosa_laevigata	RLG00000032721
rosa_multiflora	Rmu_co8406553.1_g000001 Rmu_sc0004593.1_g000004 Rmu_sc0005664.1_g000001 Rmu_sc0005664.1_g000005
rosa_roxburghii	Rroxscaffold_1G00055600 Rroxscaffold_1G00055620 Rroxscaffold_1G00055910
rosa_rugosa	Rorug05G0079200 Rorug05G0079300
rosa_samantha	Rh5AG166100 Rh5AG166200 Rh5AG166300 Rh5AG167600 Rh5AG168000 Rh5BG165300 Rh5BG165500 Rh5CG180300 Rh5CG180400 Rh5CG181400 Rh5DG166800 Rh5DG166900 Rh5DG167800
rosa_wichuraiana	Rw0G019600 Rw5G014950 Rw5G014970 Rw5G015110 Rw5G015120 Rw5G015210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1005
AccB1I	GGYRCC	1 cut(s)	977
AccIII	TCCGGA	1 cut(s)	573
AciI	CCGC	1 cut(s)	1576
AclWI	GGATC	1 cut(s)	1028
AcsI	RAATTY	4 cut(s)	232, 436, 520, 1499
AcuI	CTGAAG	4 cut(s)	429, 1109, 1110, 1665
AfaI	GTAC	3 cut(s)	918, 1342, 1883
AfiI	CCNNNNNNNGG	4 cut(s)	236, 545, 856, 1402
AhlI	ACTAGT	1 cut(s)	1654
AjiI	CACGTC	1 cut(s)	1813
AjuI	GAANNNNNNNTTGG	2 cut(s)	524, 556
AloI	GAACNNNNNNTCC	2 cut(s)	798, 830
AluBI	AGCT	7 cut(s)	16, 77, 443, 449, 589, 1495, 1516
AluI	AGCT	7 cut(s)	16, 77, 443, 449, 589, 1495, 1516
Alw21I	GWGCWC	1 cut(s)	1754
Alw26I	GTCTC	1 cut(s)	573
AlwI	GGATC	1 cut(s)	1028
AlwNI	CAGNNNCTG	4 cut(s)	452, 939, 974, 1516
Ama87I	CYCGRG	1 cut(s)	1451
Aor13HI	TCCGGA	1 cut(s)	573
AoxI	GGCC	2 cut(s)	415, 1587
ApeKI	GCWGC	7 cut(s)	74, 737, 740, 943, 1103, 1538, 1541
ApoI	RAATTY	4 cut(s)	232, 436, 520, 1499
AseI	ATTAAT	1 cut(s)	1758
Asp700I	GAANNNNTTC	2 cut(s)	164, 1155
AspLEI	GCGC	1 cut(s)	1797
AspS9I	GGNCC	5 cut(s)	220, 308, 415, 708, 1587
AsuC2I	CCSGG	1 cut(s)	238
AsuHPI	GGTGA	3 cut(s)	407, 714, 743
AvaI	CYCGRG	1 cut(s)	1451
AvaII	GGWCC	3 cut(s)	220, 308, 708
BaeI	ACNNNNGTAYC	2 cut(s)	1439, 1472
BanI	GGYRCC	1 cut(s)	977
BarI	GAAGNNNNNNTAC	2 cut(s)	1505, 1537
BbsI	GAAGAC	4 cut(s)	1001, 1062, 1395, 1419
Bbv12I	GWGCWC	1 cut(s)	1754
BbvI	GCAGC	7 cut(s)	86, 724, 727, 930, 1090, 1525, 1528
BccI	CCATC	8 cut(s)	55, 290, 378, 449, 475, 673, 733, 1824
BceAI	ACGGC	1 cut(s)	1802
BclI	TGATCA	1 cut(s)	1249
BcnI	CCSGG	1 cut(s)	238
BcoDI	GTCTC	1 cut(s)	573
BcuI	ACTAGT	1 cut(s)	1654
BfaI	CTAG	5 cut(s)	833, 1160, 1496, 1506, 1655
BfmI	CTRYAG	2 cut(s)	944, 1029
BglII	AGATCT	1 cut(s)	58
BisI	GCNGC	7 cut(s)	75, 738, 741, 944, 1104, 1539, 1542
BlsI	GCNGC	7 cut(s)	76, 739, 742, 945, 1105, 1540, 1543
Bme1390I	CCNGG	1 cut(s)	238
Bme18I	GGWCC	3 cut(s)	220, 308, 708
BmeT110I	CYCGRG	1 cut(s)	1451
BmgBI	CACGTC	1 cut(s)	1813
BmgT120I	GGNCC	5 cut(s)	220, 308, 415, 708, 1587
BmiI	GGNNCC	6 cut(s)	222, 246, 309, 709, 979, 1771
BmrFI	CCNGG	1 cut(s)	238
BmrI	ACTGGG	1 cut(s)	682
BmsI	GCATC	7 cut(s)	331, 331, 550, 926, 961, 1252, 1561
BmuI	ACTGGG	1 cut(s)	682
BpiI	GAAGAC	4 cut(s)	1001, 1062, 1395, 1419
BplI	GAGNNNNNCTC	2 cut(s)	618, 650
BpuMI	CCSGG	1 cut(s)	238
Bsa29I	ATCGAT	1 cut(s)	1433
BsaBI	GATNNNNATC	1 cut(s)	531
BsaJI	CCNNGG	4 cut(s)	89, 1075, 1107, 1784
BsaWI	WCCGGW	1 cut(s)	573
Bsc4I	CCNNNNNNNGG	4 cut(s)	236, 545, 856, 1402
Bse1I	ACTGG	6 cut(s)	677, 864, 1102, 1181, 1407, 1885
Bse3DI	GCAATG	2 cut(s)	222, 522
Bse8I	GATNNNNATC	1 cut(s)	531
BseAI	TCCGGA	1 cut(s)	573
BseCI	ATCGAT	1 cut(s)	1433
BseDI	CCNNGG	4 cut(s)	89, 1075, 1107, 1784
BseGI	GGATG	5 cut(s)	532, 958, 1141, 1264, 1693
BseJI	GATNNNNATC	1 cut(s)	531
BseLI	CCNNNNNNNGG	4 cut(s)	236, 545, 856, 1402
BseMI	GCAATG	2 cut(s)	222, 522
BseMII	CTCAG	3 cut(s)	627, 1235, 1707
BseNI	ACTGG	6 cut(s)	677, 864, 1102, 1181, 1407, 1885
BseXI	GCAGC	7 cut(s)	86, 724, 727, 930, 1090, 1525, 1528
BseYI	CCCAGC	1 cut(s)	12
BsgI	GTGCAG	1 cut(s)	831
BshFI	GGCC	2 cut(s)	417, 1589
BshNI	GGYRCC	1 cut(s)	977
BshVI	ATCGAT	1 cut(s)	1433
BsiHKAI	GWGCWC	1 cut(s)	1754
BsiHKCI	CYCGRG	1 cut(s)	1451
BsiSI	CCGG	2 cut(s)	237, 574
BslFI	GGGAC	1 cut(s)	206
BslI	CCNNNNNNNGG	4 cut(s)	236, 545, 856, 1402
BsmAI	GTCTC	1 cut(s)	573
BsmFI	GGGAC	1 cut(s)	206
BsmI	GAATGC	3 cut(s)	266, 1699, 1778
BsnI	GGCC	2 cut(s)	417, 1589
BsoBI	CYCGRG	1 cut(s)	1451
Bsp1286I	GDGCHC	1 cut(s)	1754
Bsp13I	TCCGGA	1 cut(s)	573
Bsp143I	GATC	7 cut(s)	58, 178, 886, 1033, 1249, 1674, 1875
BspACI	CCGC	1 cut(s)	1576
BspANI	GGCC	2 cut(s)	417, 1589
BspCNI	CTCAG	3 cut(s)	626, 1234, 1708
BspDI	ATCGAT	1 cut(s)	1433
BspEI	TCCGGA	1 cut(s)	573
BspHI	TCATGA	2 cut(s)	292, 684
BspLI	GGNNCC	6 cut(s)	222, 246, 309, 709, 979, 1771
BspMAI	CTGCAG	2 cut(s)	948, 1033
BspPI	GGATC	1 cut(s)	1028
BspQI	GCTCTTC	1 cut(s)	1272
BspT107I	GGYRCC	1 cut(s)	977
BsrDI	GCAATG	2 cut(s)	222, 522
BsrI	ACTGG	6 cut(s)	677, 864, 1102, 1181, 1407, 1885
BssECI	CCNNGG	4 cut(s)	89, 1075, 1107, 1784
BssMI	GATC	7 cut(s)	58, 178, 886, 1033, 1249, 1674, 1875
BssT1I	CCWWGG	3 cut(s)	89, 1075, 1107
Bst4CI	ACNGT	3 cut(s)	1061, 1526, 1612
Bst6I	CTCTTC	2 cut(s)	1272, 1641
BstC8I	GCNNGC	7 cut(s)	364, 419, 847, 941, 976, 1518, 1576
BstDEI	CTNAG	5 cut(s)	556, 613, 773, 1221, 1716
BstDSI	CCRYGG	1 cut(s)	1784
BstENI	CCTNNNNNAGG	1 cut(s)	543
BstF5I	GGATG	5 cut(s)	532, 958, 1141, 1264, 1693
BstHHI	GCGC	1 cut(s)	1797
BstKTI	GATC	7 cut(s)	61, 181, 889, 1036, 1252, 1677, 1878
BstMAI	GTCTC	1 cut(s)	573
BstMBI	GATC	7 cut(s)	58, 178, 886, 1033, 1249, 1674, 1875
BstMWI	GCNNNNNNNGC	3 cut(s)	212, 606, 635
BstNSI	RCATGY	1 cut(s)	366
BstSCI	CCNGG	1 cut(s)	236
BstSFI	CTRYAG	2 cut(s)	944, 1029
BstV1I	GCAGC	7 cut(s)	86, 724, 727, 930, 1090, 1525, 1528
BstV2I	GAAGAC	4 cut(s)	1001, 1062, 1395, 1419
BstX2I	RGATCY	2 cut(s)	58, 1033
BstYI	RGATCY	2 cut(s)	58, 1033
Bsu15I	ATCGAT	1 cut(s)	1433
BsuRI	GGCC	2 cut(s)	417, 1589
BsuTUI	ATCGAT	1 cut(s)	1433
BtgI	CCRYGG	1 cut(s)	1784
BtgZI	GCGATG	1 cut(s)	397
BtrI	CACGTC	1 cut(s)	1813
BtsCI	GGATG	5 cut(s)	532, 958, 1141, 1264, 1693
BtsI	GCAGTG	3 cut(s)	201, 1413, 1804
BtsIMutI	CAGTG	5 cut(s)	201, 1095, 1332, 1413, 1804
Cac8I	GCNNGC	7 cut(s)	364, 419, 847, 941, 976, 1518, 1576
CaiI	CAGNNNCTG	4 cut(s)	452, 939, 974, 1516
CciI	TCATGA	2 cut(s)	292, 684
CfoI	GCGC	1 cut(s)	1797
Cfr13I	GGNCC	5 cut(s)	220, 308, 415, 708, 1587
ClaI	ATCGAT	1 cut(s)	1433
CseI	GACGC	1 cut(s)	355
Csp6I	GTAC	3 cut(s)	917, 1341, 1882
CviAII	CATG	8 cut(s)	293, 303, 363, 502, 685, 1013, 1584, 1852
CviQI	GTAC	3 cut(s)	917, 1341, 1882
DdeI	CTNAG	5 cut(s)	556, 613, 773, 1221, 1716
DpnI	GATC	7 cut(s)	60, 180, 888, 1035, 1251, 1676, 1877
DpnII	GATC	7 cut(s)	58, 178, 886, 1033, 1249, 1674, 1875
DraI	TTTAAA	1 cut(s)	1353
DrdI	GACNNNNNNGTC	1 cut(s)	1005
DseDI	GACNNNNNNGTC	1 cut(s)	1005
Eam1104I	CTCTTC	2 cut(s)	1272, 1641
EarI	CTCTTC	2 cut(s)	1272, 1641
Eco130I	CCWWGG	3 cut(s)	89, 1075, 1107
Eco32I	GATATC	1 cut(s)	1085
Eco47I	GGWCC	3 cut(s)	220, 308, 708
Eco57I	CTGAAG	4 cut(s)	429, 1109, 1110, 1665
Eco88I	CYCGRG	1 cut(s)	1451
EcoNI	CCTNNNNNAGG	1 cut(s)	543
EcoO109I	RGGNCCY	3 cut(s)	308, 415, 708
EcoRV	GATATC	1 cut(s)	1085
EcoT14I	CCWWGG	3 cut(s)	89, 1075, 1107
EcoT22I	ATGCAT	1 cut(s)	1780
ErhI	CCWWGG	3 cut(s)	89, 1075, 1107
FaeI	CATG	8 cut(s)	296, 306, 366, 505, 688, 1016, 1587, 1855
FaqI	GGGAC	1 cut(s)	206
FatI	CATG	8 cut(s)	292, 302, 362, 501, 684, 1012, 1583, 1851
FauI	CCCGC	1 cut(s)	1583
FauNDI	CATATG	1 cut(s)	196
FbaI	TGATCA	1 cut(s)	1249
Fnu4HI	GCNGC	7 cut(s)	75, 738, 741, 944, 1104, 1539, 1542
FokI	GGATG	5 cut(s)	539, 965, 1128, 1271, 1700
Fsp4HI	GCNGC	7 cut(s)	75, 738, 741, 944, 1104, 1539, 1542
FspBI	CTAG	5 cut(s)	833, 1160, 1496, 1506, 1655
GlaI	GCGC	1 cut(s)	1796
GluI	GCNGC	7 cut(s)	75, 738, 741, 944, 1104, 1539, 1542
GsaI	CCCAGC	1 cut(s)	16
HaeIII	GGCC	2 cut(s)	417, 1589
HapII	CCGG	2 cut(s)	237, 574
HgaI	GACGC	1 cut(s)	355
HhaI	GCGC	1 cut(s)	1797
Hin1II	CATG	8 cut(s)	296, 306, 366, 505, 688, 1016, 1587, 1855
Hin6I	GCGC	1 cut(s)	1795
HinP1I	GCGC	1 cut(s)	1795
HincII	GTYRAC	1 cut(s)	333
HindII	GTYRAC	1 cut(s)	333
HinfI	GANTC	8 cut(s)	431, 509, 532, 654, 999, 1151, 1706, 1834
HpaI	GTTAAC	1 cut(s)	333
HpaII	CCGG	2 cut(s)	237, 574
HphI	GGTGA	3 cut(s)	407, 714, 743
Hpy166II	GTNNAC	3 cut(s)	333, 917, 1660
Hpy8I	GTNNAC	3 cut(s)	333, 917, 1660
HpyAV	CCTTC	8 cut(s)	16, 131, 234, 235, 507, 644, 1084, 1287
HpyCH4III	ACNGT	3 cut(s)	1061, 1526, 1612
HpyCH4IV	ACGT	4 cut(s)	356, 1006, 1632, 1812
HpyF10VI	GCNNNNNNNGC	3 cut(s)	212, 606, 635
HpyF3I	CTNAG	5 cut(s)	556, 613, 773, 1221, 1716
HpySE526I	ACGT	4 cut(s)	356, 1006, 1632, 1812
Hsp92II	CATG	8 cut(s)	296, 306, 366, 505, 688, 1016, 1587, 1855
HspAI	GCGC	1 cut(s)	1795
Kpn2I	TCCGGA	1 cut(s)	573
Ksp22I	TGATCA	1 cut(s)	1249
KspAI	GTTAAC	1 cut(s)	333
Kzo9I	GATC	7 cut(s)	58, 178, 886, 1033, 1249, 1674, 1875
LguI	GCTCTTC	1 cut(s)	1272
LmnI	GCTCC	2 cut(s)	244, 1769
Lsp1109I	GCAGC	7 cut(s)	86, 724, 727, 930, 1090, 1525, 1528
LweI	GCATC	7 cut(s)	331, 331, 550, 926, 961, 1252, 1561
MaeI	CTAG	5 cut(s)	833, 1160, 1496, 1506, 1655
MaeII	ACGT	4 cut(s)	356, 1006, 1632, 1812
MaeIII	GTNAC	3 cut(s)	663, 1526, 1801
MalI	GATC	7 cut(s)	60, 180, 888, 1035, 1251, 1676, 1877
MboI	GATC	7 cut(s)	58, 178, 886, 1033, 1249, 1674, 1875
MfeI	CAATTG	1 cut(s)	1670
MflI	RGATCY	2 cut(s)	58, 1033
MhlI	GDGCHC	1 cut(s)	1754
MlyI	GAGTC	2 cut(s)	440, 993
MmeI	TCCRAC	2 cut(s)	842, 1615
Mph1103I	ATGCAT	1 cut(s)	1780
MroI	TCCGGA	1 cut(s)	573
MroXI	GAANNNNTTC	2 cut(s)	164, 1155
MseI	TTAA	9 cut(s)	332, 551, 717, 1040, 1217, 1352, 1746, 1758, 1842
MslI	CAYNNNNRTG	3 cut(s)	934, 1017, 1146
MspI	CCGG	2 cut(s)	237, 574
MspR9I	CCNGG	1 cut(s)	238
MunI	CAATTG	1 cut(s)	1670
Mva1269I	GAATGC	3 cut(s)	266, 1699, 1778
MwoI	GCNNNNNNNGC	3 cut(s)	212, 606, 635
NciI	CCSGG	1 cut(s)	238
NdeI	CATATG	1 cut(s)	196
NdeII	GATC	7 cut(s)	58, 178, 886, 1033, 1249, 1674, 1875
NlaIII	CATG	8 cut(s)	296, 306, 366, 505, 688, 1016, 1587, 1855
NlaIV	GGNNCC	6 cut(s)	222, 246, 309, 709, 979, 1771
NmuCI	GTSAC	1 cut(s)	663
NsiI	ATGCAT	1 cut(s)	1780
NspI	RCATGY	1 cut(s)	366
PaeI	GCATGC	1 cut(s)	366
PaeR7I	CTCGAG	1 cut(s)	1451
PagI	TCATGA	2 cut(s)	292, 684
PciSI	GCTCTTC	1 cut(s)	1272
PcsI	WCGNNNNNNNCGW	1 cut(s)	1003
PctI	GAATGC	3 cut(s)	266, 1699, 1778
PdmI	GAANNNNTTC	2 cut(s)	164, 1155
PfeI	GAWTC	6 cut(s)	509, 532, 654, 1151, 1706, 1834
PfoI	TCCNGGA	1 cut(s)	236
PkrI	GCNGC	7 cut(s)	76, 739, 742, 945, 1105, 1540, 1543
PleI	GAGTC	2 cut(s)	439, 993
PpsI	GAGTC	2 cut(s)	439, 993
PpuMI	RGGWCCY	2 cut(s)	308, 708
PshBI	ATTAAT	1 cut(s)	1758
Psp5II	RGGWCCY	2 cut(s)	308, 708
PspFI	CCCAGC	1 cut(s)	12
PspN4I	GGNNCC	6 cut(s)	222, 246, 309, 709, 979, 1771
PspPI	GGNCC	5 cut(s)	220, 308, 415, 708, 1587
PspPPI	RGGWCCY	2 cut(s)	308, 708
PspXI	VCTCGAGB	1 cut(s)	1451
PstI	CTGCAG	2 cut(s)	948, 1033
PstNI	CAGNNNCTG	4 cut(s)	452, 939, 974, 1516
PsuI	RGATCY	2 cut(s)	58, 1033
RsaI	GTAC	3 cut(s)	918, 1342, 1883
RsaNI	GTAC	3 cut(s)	917, 1341, 1882
RseI	CAYNNNNRTG	3 cut(s)	934, 1017, 1146
SapI	GCTCTTC	1 cut(s)	1272
SaqAI	TTAA	9 cut(s)	332, 551, 717, 1040, 1217, 1352, 1746, 1758, 1842
SatI	GCNGC	7 cut(s)	75, 738, 741, 944, 1104, 1539, 1542
Sau3AI	GATC	7 cut(s)	58, 178, 886, 1033, 1249, 1674, 1875
Sau96I	GGNCC	5 cut(s)	220, 308, 415, 708, 1587
SchI	GAGTC	2 cut(s)	440, 993
ScrFI	CCNGG	1 cut(s)	238
SduI	GDGCHC	1 cut(s)	1754
SfaNI	GCATC	7 cut(s)	331, 331, 550, 926, 961, 1252, 1561
SfcI	CTRYAG	2 cut(s)	944, 1029
Sfr274I	CTCGAG	1 cut(s)	1451
SinI	GGWCC	3 cut(s)	220, 308, 708
SlaI	CTCGAG	1 cut(s)	1451
SmiMI	CAYNNNNRTG	3 cut(s)	934, 1017, 1146
SmlI	CTYRAG	1 cut(s)	1451
SmoI	CTYRAG	1 cut(s)	1451
SpeI	ACTAGT	1 cut(s)	1654
SphI	GCATGC	1 cut(s)	366
SsiI	CCGC	1 cut(s)	1576
SspI	AATATT	3 cut(s)	391, 492, 1325
SspMI	CTAG	5 cut(s)	833, 1160, 1496, 1506, 1655
StyD4I	CCNGG	1 cut(s)	236
StyI	CCWWGG	3 cut(s)	89, 1075, 1107
TaaI	ACNGT	3 cut(s)	1061, 1526, 1612
TaiI	ACGT	4 cut(s)	359, 1009, 1635, 1815
TaqI	TCGA	8 cut(s)	429, 889, 921, 997, 1433, 1452, 1677, 1878
TatI	WGTACW	2 cut(s)	916, 1340
TfiI	GAWTC	6 cut(s)	509, 532, 654, 1151, 1706, 1834
Tru1I	TTAA	9 cut(s)	332, 551, 717, 1040, 1217, 1352, 1746, 1758, 1842
Tru9I	TTAA	9 cut(s)	332, 551, 717, 1040, 1217, 1352, 1746, 1758, 1842
TscAI	CASTG	5 cut(s)	208, 1102, 1339, 1413, 1804
TseFI	GTSAC	1 cut(s)	663
TseI	GCWGC	7 cut(s)	74, 737, 740, 943, 1103, 1538, 1541
Tsp45I	GTSAC	1 cut(s)	663
TspGWI	ACGGA	1 cut(s)	1611
TspRI	CASTG	5 cut(s)	208, 1102, 1339, 1413, 1804
VpaK11BI	GGWCC	3 cut(s)	220, 308, 708
VspI	ATTAAT	1 cut(s)	1758
XagI	CCTNNNNNAGG	1 cut(s)	543
XapI	RAATTY	4 cut(s)	232, 436, 520, 1499
XbaI	TCTAGA	2 cut(s)	832, 1159
XceI	RCATGY	1 cut(s)	366
XhoI	CTCGAG	1 cut(s)	1451
XmnI	GAANNNNTTC	2 cut(s)	164, 1155
XspI	CTAG	5 cut(s)	833, 1160, 1496, 1506, 1655
Zsp2I	ATGCAT	1 cut(s)	1780

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.