Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0001708

Physical Location & Seq

Genomic Coordinates Reverse (-)

31404565 .. 31408691

Gene Structure 4127 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1215700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGCTGCTGTTTTGTTTTGAGGGGACTACACTAAGAATAAGGAAGATGTTCGACAAGATTGATCTCTCGGTTTCCTCATACGACACAGCTTGGGTAGCAATGGTCCCTTCTCCGAATTCCCCAAAGGACCCGTTTTTCCCCGAATGCGTAAACTGGTTATTGTGTAATCAACTCCGTGATGGCTCATGGTGTCCTTCTAATTTGCATCCCTTGTTCACGAAAGAAGCTCTCTTATCTACCTTAGCTTGCATCCTTGCACTGAAACAGTGGAATGTTGGCGAAGAACAAATTAACAAGGGGCTACACTTTATCGAATCAAATTTAGCTTCAGCTTCTGATGAAGAACAACAATCCCCCGTTGGATTTAATATATTATTTCCTGCGATGATTGAATCTGCAACGAATTTGAAGATGAACCTTCCCTTCGGTGCACCAACGCTAGATGCTTTATTTCACAGAAGAGACTTTGAGCTGAAAAGAGGTTATGCGAGCAACTCAGAGGGGTGGAGAGCGTTCTTAGCATATATTTCAGAAGGATTTGGAAGCTCGCAGAACTGGGAGCTGGTCATGAAGTATCAAAGGAGGAATGGATCCTTGTTTAATTCACCAGCAACCACCGCCTCTGCTTTTACTCACCTTAAGAATGCTGATTGTCTTAAGTACCTACGCACACTCTTAGAAAAGTTTGGGAATGCAGTTCCAACGGTTTATCCTCTACATAAACATGTCCGTCTTTCTATGGTTGCCAGTCTTGAAAGTTTGGGTGTTGATCGACATTTCAGGGAGGAAATTAGAAGTGTACTGGATGAAACATACAGATGCTGGCTGCAGGGTGATGAAGATATATTTTCCGATGCTGCCACTTGTGCAATGGCATTTCGACTCTTACGTGTTAATGGATATGATGTTTCTGCAGGTATTTTCAATTTTGGGTACCTTGGCTTTCATGACTTTGTTTTGGCAAAAACAAATGCAACTGATTTATGCTGTCTTTTAGATCCATTAACTCAATATTCAGAAGATCGTTTCTTCAATTCCCTTGGAGGGTATATGAAGAACATCGGTGATGCCTTAGAATTGTTTAGGGCTTCAGAAACCATCATACATCCAGATGAATCCGTCCTAGAGAAACAACATTACTGGACGAGTCATTTTCTGAAACAGGAGTTATCCAATACTTTAATTCAGGGTCATAGACTGAATAAGCATATCGGCCTAGAGGTGGCTGATGCTCTTAAAATTCCTCGCTACGCAATTTTGGGTCGGTTGTCAACCAGGACAGCTATAAAATATTACAACACAGACAGTACAAGGATTTTAAAATCTTATTATCGTTGTTTGAATATTGGAAATGAAGATTTCCTAAAGCTGGCTGTGGATGACTTCAATAATTGCCAATCTATACACCGTGAAGAACTCAACCATTTTACTAGGTGGGTTGAGGAGTACAGATTAGACAAGCTAAAGTTTGCTAGGCAGAAGCAGGCATACTGTTACTTCTCTGCTGCTGCAACCCTTTTTCCTCCCGAACTATCAGATGCACGCATATCATGGGCCAAAAATGGCGTCCTTACAACTGTGGTCGATGATTTCTTTGACGTTGGAGGTTCCGAAGAGGAACTGATAAACCTCATACAATTGGTTGATAAGTGGGATGTGAATGTGAGTGTTGATTGTTGTTCCGAGAATGTTGAAATTATATTTTCAGCACTCAAGAACACAATCAACGAGATTGGAGCCAAGGCATTCACGCGGCAAGGACGCAGTGTGACAAGTCATGTTACAGGGATTTGGTTGGATTTGATCAAGTCTGCCTTCAAGGAAGCCGAGTGGTTGAGAAACAAGTCAGTTCCAACAATGGAGGAGTATATGGAAAATGCATACGTATCATTTGCCTTGGGGCCAATTGTCCTTCCAGCTCTCTATTTGGTTGGGCCTCAGCTTTCAGAGGAGGCTGTAGGAAGTTCCGAATTCCTTCATCTGTATCGACTTATGAGCACAGCTGGGCGCCTTCTCAATGATATCCAAGGGTTTAAGAGAGAATCTGCAGAAGGGAAGCTAAATGCTGTGTCCTTGGCCATGATTCATGGCAGCGGCATTACTGAGGAAGAGGCCATTAACGAGATGAAGAATGTAATAGTCAGTAAGAGGAGAGAATTGCTAAGATTAGTTTTGCTCGAGAAGGGTAGCGTAGTTCCGAGAGCTTGCAAAGATTTGTTTTGGAACATGAGCAAAGTGCTGCACCTGTTTTACGCTAAGCATGATGGATTCACAGCACATGATATGATGAAGACGGCATATTCAGTTATAGAAGAACCCATCCTTCTCAGTGAACTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009899 GO:0009987 GO:0010033 GO:0010333 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

780

Amino Acids

88.48

Weight (kDa)

5.84

Isoelectric Point (pI)

45.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	185 - 309	8.3e-27	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	482 - 718	9.9e-70	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	522 - 718	7.8e-43	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001708)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79460
fragaria_vesca	FvH4_3g14116 FvH4_3g14130 FvH4_3g14131 FvH4_3g16270
malus_domestica	MD03G1187200.v1.1 MD10G1215700.v1.1 MD10G1215900.v1.1 MD10G1216200.v1.1
prunus_persica	Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128600_v2.0.a1 Prupe.4G128700_v2.0.a1
pyrus_communis	pycom03g13990 pycom10g18220
rosa_chinensis	RchiOBHm_Chr5g0023441 RchiOBHm_Chr5g0023471 RchiOBHm_Chr5g0023641
rosa_laevigata	RLG00000032721
rosa_multiflora	Rmu_co8406553.1_g000001 Rmu_sc0004593.1_g000004 Rmu_sc0005664.1_g000001 Rmu_sc0005664.1_g000005
rosa_roxburghii	Rroxscaffold_1G00055600 Rroxscaffold_1G00055620 Rroxscaffold_1G00055910
rosa_rugosa	Rorug05G0079200 Rorug05G0079300
rosa_samantha	Rh5AG166100 Rh5AG166200 Rh5AG166300 Rh5AG167600 Rh5AG168000 Rh5BG165300 Rh5BG165500 Rh5CG180300 Rh5CG180400 Rh5CG181400 Rh5DG166800 Rh5DG166900 Rh5DG167800
rosa_wichuraiana	Rw0G019600 Rw5G014950 Rw5G014970 Rw5G015110 Rw5G015120 Rw5G015210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	905
Acc65I	GGTACC	1 cut(s)	933
AccB1I	GGYRCC	2 cut(s)	933, 2007
AccII	CGCG	1 cut(s)	1753
AciI	CCGC	3 cut(s)	618, 1753, 2094
AclWI	GGATC	3 cut(s)	585, 598, 992
AcoI	YGGCCR	1 cut(s)	2076
AcsI	RAATTY	5 cut(s)	115, 319, 403, 1239, 1970
AcuI	CTGAAG	2 cut(s)	312, 1074
AcyI	GRCGYC	2 cut(s)	1566, 2008
AfaI	GTAC	5 cut(s)	662, 801, 935, 1309, 1448
AfiI	CCNNNNNNNGG	3 cut(s)	1044, 1222, 1369
AflII	CTTAAG	2 cut(s)	638, 656
AflIII	ACRYGT	2 cut(s)	724, 889
AgsI	TTSAA	9 cut(s)	392, 409, 755, 925, 1033, 1342, 1387, 1694, 1819
AjnI	CCWGG	1 cut(s)	1274
Alw21I	GWGCWC	2 cut(s)	433, 2000
Alw26I	GTCTC	1 cut(s)	456
Alw44I	GTGCAC	1 cut(s)	429
AlwI	GGATC	3 cut(s)	585, 598, 992
AlwNI	CAGNNNCTG	2 cut(s)	335, 822
Ama87I	CYCGRG	1 cut(s)	2177
AoxI	GGCC	6 cut(s)	1213, 1554, 1901, 1934, 2076, 2112
ApaLI	GTGCAC	1 cut(s)	429
ApeKI	GCWGC	7 cut(s)	4, 826, 857, 1505, 1508, 2091, 2239
ApoI	RAATTY	5 cut(s)	115, 319, 403, 1239, 1970
ArsI	GACNNNNNNTTYG	2 cut(s)	1551, 1583
Asp700I	GAANNNNTTC	2 cut(s)	47, 1974
Asp718I	GGTACC	1 cut(s)	933
AspLEI	GCGC	1 cut(s)	2010
AspS9I	GGNCC	5 cut(s)	103, 127, 1554, 1901, 1934
AsuHPI	GGTGA	4 cut(s)	597, 626, 845, 1076
AvaI	CYCGRG	1 cut(s)	2177
AvaII	GGWCC	2 cut(s)	103, 127
BaeGI	GKGCMC	1 cut(s)	433
BalI	TGGCCA	1 cut(s)	2078
BamHI	GGATCC	1 cut(s)	590
BanI	GGYRCC	2 cut(s)	933, 2007
BarI	GAAGNNNNNNTAC	2 cut(s)	1472, 1504
BbsI	GAAGAC	1 cut(s)	2297
Bbv12I	GWGCWC	2 cut(s)	433, 2000
BbvCI	CCTCAGC	1 cut(s)	1938
BbvI	GCAGC	6 cut(s)	813, 844, 1492, 1495, 2103, 2226
BccI	CCATC	4 cut(s)	173, 1106, 2258, 2327
BceAI	ACGGC	1 cut(s)	2310
BciT130I	CCWGG	1 cut(s)	1276
BclI	TGATCA	1 cut(s)	1803
BcoDI	GTCTC	1 cut(s)	456
BfaI	CTAG	5 cut(s)	440, 1124, 1217, 1431, 1473
BfmI	CTRYAG	4 cut(s)	827, 912, 1956, 2046
BfoI	RGCGCY	1 cut(s)	2011
BfrI	CTTAAG	2 cut(s)	638, 656
BfuAI	ACCTGC	1 cut(s)	905
BisI	GCNGC	9 cut(s)	5, 827, 858, 1506, 1509, 1754, 2092, 2095, 2240
BlpI	GCTNAGC	1 cut(s)	2256
BlsI	GCNGC	9 cut(s)	6, 828, 859, 1507, 1510, 1755, 2093, 2096, 2241
Bme1390I	CCNGG	1 cut(s)	1276
Bme18I	GGWCC	2 cut(s)	103, 127
BmeT110I	CYCGRG	1 cut(s)	2177
BmgT120I	GGNCC	5 cut(s)	103, 127, 1554, 1901, 1934
BmiI	GGNNCC	8 cut(s)	105, 129, 592, 935, 1609, 1738, 1902, 2009
BmrFI	CCNGG	1 cut(s)	1276
BmrI	ACTGGG	1 cut(s)	565
BmsI	GCATC	8 cut(s)	214, 258, 433, 809, 844, 1057, 1219, 1528
BmuI	ACTGGG	1 cut(s)	565
BpiI	GAAGAC	1 cut(s)	2297
Bpu10I	CCTNAGC	2 cut(s)	241, 1938
Bpu1102I	GCTNAGC	1 cut(s)	2256
BpuEI	CTTGAG	1 cut(s)	1697
BsaAI	YACGTR	2 cut(s)	890, 1885
BsaHI	GRCGYC	2 cut(s)	1566, 2008
BsaJI	CCNNGG	6 cut(s)	937, 1039, 1740, 1896, 2026, 2073
Bsc4I	CCNNNNNNNGG	3 cut(s)	1044, 1222, 1369
Bse1I	ACTGG	5 cut(s)	158, 560, 747, 807, 1145
Bse3DI	GCAATG	2 cut(s)	105, 876
BseBI	CCWGG	1 cut(s)	1276
BseDI	CCNNGG	6 cut(s)	937, 1039, 1740, 1896, 2026, 2073
BseGI	GGATG	7 cut(s)	205, 249, 811, 1105, 1384, 1660, 2319
BseLI	CCNNNNNNNGG	3 cut(s)	1044, 1222, 1369
BseMI	GCAATG	2 cut(s)	105, 876
BseMII	CTCAG	3 cut(s)	510, 1952, 2094
BseNI	ACTGG	5 cut(s)	158, 560, 747, 807, 1145
BseRI	GAGGAG	4 cut(s)	1457, 1877, 1964, 2164
BseSI	GKGCMC	1 cut(s)	433
BseXI	GCAGC	6 cut(s)	813, 844, 1492, 1495, 2103, 2226
BseYI	CCCAGC	1 cut(s)	2003
BsgI	GTGCAG	1 cut(s)	2225
Bsh1236I	CGCG	1 cut(s)	1753
BshFI	GGCC	6 cut(s)	1215, 1556, 1903, 1936, 2078, 2114
BshNI	GGYRCC	2 cut(s)	933, 2007
BsiHKAI	GWGCWC	2 cut(s)	433, 2000
BsiHKCI	CYCGRG	1 cut(s)	2177
BslFI	GGGAC	2 cut(s)	37, 89
BslI	CCNNNNNNNGG	3 cut(s)	1044, 1222, 1369
BsmAI	GTCTC	1 cut(s)	456
BsmFI	GGGAC	2 cut(s)	37, 89
BsmI	GAATGC	4 cut(s)	149, 649, 697, 1745
BsnI	GGCC	6 cut(s)	1215, 1556, 1903, 1936, 2078, 2114
BsoBI	CYCGRG	1 cut(s)	2177
Bsp1286I	GDGCHC	2 cut(s)	433, 2000
Bsp143I	GATC	6 cut(s)	61, 590, 769, 997, 1021, 1803
Bsp1720I	GCTNAGC	1 cut(s)	2256
BspACI	CCGC	3 cut(s)	618, 1753, 2094
BspANI	GGCC	6 cut(s)	1215, 1556, 1903, 1936, 2078, 2114
BspCNI	CTCAG	4 cut(s)	509, 1951, 2095, 2340
BspFNI	CGCG	1 cut(s)	1753
BspHI	TCATGA	2 cut(s)	567, 946
BspLI	GGNNCC	8 cut(s)	105, 129, 592, 935, 1609, 1738, 1902, 2009
BspMAI	CTGCAG	3 cut(s)	831, 916, 2050
BspMI	ACCTGC	1 cut(s)	905
BspPI	GGATC	3 cut(s)	585, 598, 992
BspT107I	GGYRCC	2 cut(s)	933, 2007
BspTI	CTTAAG	2 cut(s)	638, 656
BsrDI	GCAATG	2 cut(s)	105, 876
BsrI	ACTGG	5 cut(s)	158, 560, 747, 807, 1145
BssECI	CCNNGG	6 cut(s)	937, 1039, 1740, 1896, 2026, 2073
BssMI	GATC	6 cut(s)	61, 590, 769, 997, 1021, 1803
BssNI	GRCGYC	2 cut(s)	1566, 2008
BssT1I	CCWWGG	6 cut(s)	937, 1039, 1740, 1896, 2026, 2073
Bst2UI	CCWGG	1 cut(s)	1276
Bst4CI	ACNGT	7 cut(s)	267, 706, 1307, 1409, 1493, 1579, 2337
Bst6I	CTCTTC	3 cut(s)	454, 1608, 2103
BstACI	GRCGYC	2 cut(s)	1566, 2008
BstAFI	CTTAAG	2 cut(s)	638, 656
BstBAI	YACGTR	2 cut(s)	890, 1885
BstC8I	GCNNGC	8 cut(s)	247, 490, 548, 824, 1371, 1485, 1543, 2206
BstF5I	GGATG	7 cut(s)	205, 249, 811, 1105, 1384, 1660, 2319
BstFNI	CGCG	1 cut(s)	1753
BstH2I	RGCGCY	1 cut(s)	2011
BstHHI	GCGC	1 cut(s)	2010
BstKTI	GATC	6 cut(s)	64, 593, 772, 1000, 1024, 1806
BstMAI	GTCTC	1 cut(s)	456
BstMBI	GATC	6 cut(s)	61, 590, 769, 997, 1021, 1803
BstMWI	GCNNNNNNNGC	4 cut(s)	95, 518, 617, 866
BstNI	CCWGG	1 cut(s)	1276
BstNSI	RCATGY	1 cut(s)	728
BstSCI	CCNGG	1 cut(s)	1274
BstSFI	CTRYAG	4 cut(s)	827, 912, 1956, 2046
BstSLI	GKGCMC	1 cut(s)	433
BstSNI	TACGTA	1 cut(s)	1885
BstUI	CGCG	1 cut(s)	1753
BstV1I	GCAGC	6 cut(s)	813, 844, 1492, 1495, 2103, 2226
BstV2I	GAAGAC	1 cut(s)	2297
BstX2I	RGATCY	2 cut(s)	590, 997
BstYI	RGATCY	2 cut(s)	590, 997
BsuRI	GGCC	6 cut(s)	1215, 1556, 1903, 1936, 2078, 2114
BtgZI	GCGATG	1 cut(s)	398
BtsCI	GGATG	7 cut(s)	205, 249, 811, 1105, 1384, 1660, 2319
BtsI	GCAGTG	1 cut(s)	1771
BtsIMutI	CAGTG	4 cut(s)	257, 272, 1771, 2335
BveI	ACCTGC	1 cut(s)	905
Cac8I	GCNNGC	8 cut(s)	247, 490, 548, 824, 1371, 1485, 1543, 2206
CaiI	CAGNNNCTG	2 cut(s)	335, 822
CciI	TCATGA	2 cut(s)	567, 946
CfoI	GCGC	1 cut(s)	2010
Cfr13I	GGNCC	5 cut(s)	103, 127, 1554, 1901, 1934
CseI	GACGC	2 cut(s)	1555, 1770
Csp6I	GTAC	5 cut(s)	661, 800, 934, 1308, 1447
CviQI	GTAC	5 cut(s)	661, 800, 934, 1308, 1447
DinI	GGCGCC	1 cut(s)	2009
DpnI	GATC	6 cut(s)	63, 592, 771, 999, 1023, 1805
DpnII	GATC	6 cut(s)	61, 590, 769, 997, 1021, 1803
DraI	TTTAAA	1 cut(s)	1320
EaeI	YGGCCR	1 cut(s)	2076
Eam1104I	CTCTTC	3 cut(s)	454, 1608, 2103
EarI	CTCTTC	3 cut(s)	454, 1608, 2103
Eco105I	TACGTA	1 cut(s)	1885
Eco130I	CCWWGG	6 cut(s)	937, 1039, 1740, 1896, 2026, 2073
Eco32I	GATATC	1 cut(s)	2023
Eco47I	GGWCC	2 cut(s)	103, 127
Eco57I	CTGAAG	2 cut(s)	312, 1074
Eco88I	CYCGRG	1 cut(s)	2177
EcoO109I	RGGNCCY	1 cut(s)	127
EcoRI	GAATTC	2 cut(s)	115, 1970
EcoRII	CCWGG	1 cut(s)	1274
EcoRV	GATATC	1 cut(s)	2023
EcoT14I	CCWWGG	6 cut(s)	937, 1039, 1740, 1896, 2026, 2073
EcoT22I	ATGCAT	1 cut(s)	1882
EgeI	GGCGCC	1 cut(s)	2009
EheI	GGCGCC	1 cut(s)	2009
ErhI	CCWWGG	6 cut(s)	937, 1039, 1740, 1896, 2026, 2073
FalI	AAGNNNNNCTT	2 cut(s)	1799, 1831
FaqI	GGGAC	2 cut(s)	37, 89
FbaI	TGATCA	1 cut(s)	1803
Fnu4HI	GCNGC	9 cut(s)	5, 827, 858, 1506, 1509, 1754, 2092, 2095, 2240
FokI	GGATG	7 cut(s)	192, 236, 818, 1092, 1391, 1667, 2306
Fsp4HI	GCNGC	9 cut(s)	5, 827, 858, 1506, 1509, 1754, 2092, 2095, 2240
FspBI	CTAG	5 cut(s)	440, 1124, 1217, 1431, 1473
GlaI	GCGC	1 cut(s)	2009
GluI	GCNGC	9 cut(s)	5, 827, 858, 1506, 1509, 1754, 2092, 2095, 2240
GsaI	CCCAGC	1 cut(s)	2007
HaeII	RGCGCY	1 cut(s)	2011
HaeIII	GGCC	6 cut(s)	1215, 1556, 1903, 1936, 2078, 2114
HgaI	GACGC	2 cut(s)	1555, 1770
HhaI	GCGC	1 cut(s)	2010
Hin1I	GRCGYC	2 cut(s)	1566, 2008
Hin6I	GCGC	1 cut(s)	2008
HinP1I	GCGC	1 cut(s)	2008
HincII	GTYRAC	1 cut(s)	1272
HindII	GTYRAC	1 cut(s)	1272
HinfI	GANTC	8 cut(s)	314, 392, 882, 1115, 1147, 2042, 2083, 2268
HphI	GGTGA	4 cut(s)	597, 626, 845, 1076
Hpy166II	GTNNAC	6 cut(s)	151, 216, 431, 800, 1272, 2333
Hpy188III	TCNNGA	8 cut(s)	217, 568, 752, 947, 1109, 1526, 1714, 2179
Hpy8I	GTNNAC	6 cut(s)	151, 216, 431, 800, 1272, 2333
HpyCH4III	ACNGT	7 cut(s)	267, 706, 1307, 1409, 1493, 1579, 2337
HpyCH4IV	ACGT	3 cut(s)	889, 1599, 1884
HpyF10VI	GCNNNNNNNGC	4 cut(s)	95, 518, 617, 866
HpySE526I	ACGT	3 cut(s)	889, 1599, 1884
Hsp92I	GRCGYC	2 cut(s)	1566, 2008
HspAI	GCGC	1 cut(s)	2008
KasI	GGCGCC	1 cut(s)	2007
KpnI	GGTACC	1 cut(s)	937
Ksp22I	TGATCA	1 cut(s)	1803
Kzo9I	GATC	6 cut(s)	61, 590, 769, 997, 1021, 1803
LmnI	GCTCC	2 cut(s)	559, 1736
Lsp1109I	GCAGC	6 cut(s)	813, 844, 1492, 1495, 2103, 2226
LweI	GCATC	8 cut(s)	214, 258, 433, 809, 844, 1057, 1219, 1528
MaeI	CTAG	5 cut(s)	440, 1124, 1217, 1431, 1473
MaeII	ACGT	3 cut(s)	889, 1599, 1884
MaeIII	GTNAC	3 cut(s)	1493, 1768, 1780
MalI	GATC	6 cut(s)	63, 592, 771, 999, 1023, 1805
MboI	GATC	6 cut(s)	61, 590, 769, 997, 1021, 1803
MfeI	CAATTG	2 cut(s)	1637, 1905
MflI	RGATCY	2 cut(s)	590, 997
MhlI	GDGCHC	2 cut(s)	433, 2000
MlsI	TGGCCA	1 cut(s)	2078
MluNI	TGGCCA	1 cut(s)	2078
Mly113I	GGCGCC	1 cut(s)	2008
MlyI	GAGTC	2 cut(s)	876, 1156
MmeI	TCCRAC	5 cut(s)	340, 725, 1582, 1776, 1877
Mox20I	TGGCCA	1 cut(s)	2078
Mph1103I	ATGCAT	1 cut(s)	1882
MroXI	GAANNNNTTC	2 cut(s)	47, 1974
MscI	TGGCCA	1 cut(s)	2078
MslI	CAYNNNNRTG	3 cut(s)	723, 817, 1110
Msp20I	TGGCCA	1 cut(s)	2078
MspA1I	CMGCKG	2 cut(s)	2003, 2094
MspCI	CTTAAG	2 cut(s)	638, 656
MspR9I	CCNGG	1 cut(s)	1276
MunI	CAATTG	2 cut(s)	1637, 1905
Mva1269I	GAATGC	4 cut(s)	149, 649, 697, 1745
MvaI	CCWGG	1 cut(s)	1276
MvnI	CGCG	1 cut(s)	1753
MwoI	GCNNNNNNNGC	4 cut(s)	95, 518, 617, 866
NarI	GGCGCC	1 cut(s)	2008
NdeII	GATC	6 cut(s)	61, 590, 769, 997, 1021, 1803
NlaIV	GGNNCC	8 cut(s)	105, 129, 592, 935, 1609, 1738, 1902, 2009
NmeAIII	GCCGAG	1 cut(s)	1852
NmuCI	GTSAC	1 cut(s)	1768
NsiI	ATGCAT	1 cut(s)	1882
NspI	RCATGY	1 cut(s)	728
PaeR7I	CTCGAG	1 cut(s)	2177
PagI	TCATGA	2 cut(s)	567, 946
PciI	ACATGT	1 cut(s)	724
PcsI	WCGNNNNNNNCGW	1 cut(s)	886
PctI	GAATGC	4 cut(s)	149, 649, 697, 1745
PdmI	GAANNNNTTC	2 cut(s)	47, 1974
PfeI	GAWTC	6 cut(s)	314, 392, 1115, 2042, 2083, 2268
PkrI	GCNGC	9 cut(s)	6, 828, 859, 1507, 1510, 1755, 2093, 2096, 2241
PleI	GAGTC	2 cut(s)	876, 1155
PluTI	GGCGCC	1 cut(s)	2011
PpsI	GAGTC	2 cut(s)	876, 1155
Ppu21I	YACGTR	2 cut(s)	890, 1885
PpuMI	RGGWCCY	1 cut(s)	127
PscI	ACATGT	1 cut(s)	724
Psp5II	RGGWCCY	1 cut(s)	127
Psp6I	CCWGG	1 cut(s)	1274
PspFI	CCCAGC	1 cut(s)	2003
PspGI	CCWGG	1 cut(s)	1274
PspN4I	GGNNCC	8 cut(s)	105, 129, 592, 935, 1609, 1738, 1902, 2009
PspPI	GGNCC	5 cut(s)	103, 127, 1554, 1901, 1934
PspPPI	RGGWCCY	1 cut(s)	127
PstI	CTGCAG	3 cut(s)	831, 916, 2050
PstNI	CAGNNNCTG	2 cut(s)	335, 822
PsuI	RGATCY	2 cut(s)	590, 997
PvuII	CAGCTG	1 cut(s)	2003
RsaI	GTAC	5 cut(s)	662, 801, 935, 1309, 1448
RsaNI	GTAC	5 cut(s)	661, 800, 934, 1308, 1447
RseI	CAYNNNNRTG	3 cut(s)	723, 817, 1110
SatI	GCNGC	9 cut(s)	5, 827, 858, 1506, 1509, 1754, 2092, 2095, 2240
Sau3AI	GATC	6 cut(s)	61, 590, 769, 997, 1021, 1803
Sau96I	GGNCC	5 cut(s)	103, 127, 1554, 1901, 1934
SchI	GAGTC	2 cut(s)	876, 1156
ScrFI	CCNGG	1 cut(s)	1276
SduI	GDGCHC	2 cut(s)	433, 2000
SfaNI	GCATC	8 cut(s)	214, 258, 433, 809, 844, 1057, 1219, 1528
SfcI	CTRYAG	4 cut(s)	827, 912, 1956, 2046
SfoI	GGCGCC	1 cut(s)	2009
Sfr274I	CTCGAG	1 cut(s)	2177
SinI	GGWCC	2 cut(s)	103, 127
SlaI	CTCGAG	1 cut(s)	2177
SmiMI	CAYNNNNRTG	3 cut(s)	723, 817, 1110
SmlI	CTYRAG	4 cut(s)	638, 656, 1712, 2177
SmoI	CTYRAG	4 cut(s)	638, 656, 1712, 2177
SnaBI	TACGTA	1 cut(s)	1885
SsiI	CCGC	3 cut(s)	618, 1753, 2094
SspDI	GGCGCC	1 cut(s)	2007
SspI	AATATT	3 cut(s)	1013, 1292, 1345
SspMI	CTAG	5 cut(s)	440, 1124, 1217, 1431, 1473
StyD4I	CCNGG	1 cut(s)	1274
StyI	CCWWGG	6 cut(s)	937, 1039, 1740, 1896, 2026, 2073
TaaI	ACNGT	7 cut(s)	267, 706, 1307, 1409, 1493, 1579, 2337
TaiI	ACGT	3 cut(s)	892, 1602, 1887
TaqI	TCGA	7 cut(s)	51, 312, 772, 880, 1584, 1987, 2178
TatI	WGTACW	3 cut(s)	799, 1307, 1446
TauI	GCSGC	2 cut(s)	1756, 2097
TfiI	GAWTC	6 cut(s)	314, 392, 1115, 2042, 2083, 2268
TscAI	CASTG	4 cut(s)	264, 272, 1771, 2335
TseFI	GTSAC	1 cut(s)	1768
TseI	GCWGC	7 cut(s)	4, 826, 857, 1505, 1508, 2091, 2239
Tsp45I	GTSAC	1 cut(s)	1768
TspGWI	ACGGA	3 cut(s)	164, 719, 1108
TspRI	CASTG	4 cut(s)	264, 272, 1771, 2335
Vha464I	CTTAAG	2 cut(s)	638, 656
VneI	GTGCAC	1 cut(s)	429
VpaK11BI	GGWCC	2 cut(s)	103, 127
XapI	RAATTY	5 cut(s)	115, 319, 403, 1239, 1970
XceI	RCATGY	1 cut(s)	728
XcmI	CCANNNNNNNNNTGG	1 cut(s)	868
XhoI	CTCGAG	1 cut(s)	2177
XmnI	GAANNNNTTC	2 cut(s)	47, 1974
XspI	CTAG	5 cut(s)	440, 1124, 1217, 1431, 1473
Zsp2I	ATGCAT	1 cut(s)	1882

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.