Prupe.4G128600_v2.0.a1

Belongs to the terpene synthase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
7077596 .. 7084111
6516 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G128600.1

Sequence Viewer

Length: 1383 bp
ATGGTACTAAATTTAGTCCAAGCCAGTCCAAGCCAAGCCTCTTCAACAGTCCCGAGACTAAATGGGGCAGCAGAGAGAGAGAACAATACTAATTTTGAGGGGACTAAAGAAAGAATAAAGAAGATGTTCACCAAGGTTGATCTCTCTGTTTCATCATATGACACTGCTTGGGTGGCAATGGTCCCTTCTCCAAATTCTTCAAAGGAACCTTTTTTCCCTGAATGTGTAAATTGGTTATTGGCAAATCAACTCCATGATGGCTCATGGGGTCCTAAGTTTCATCCCTTGTTAATCAAAGATGCTCTCTTATCTACCTTAGCATGTATCCTTGCACTAAAGCGGTGGAGTGTTGGTGAAGAACAAATTAACAAGGGGCTACATTTTATTGAATCAAATTTAGCTTTAGCTACCGATGAAGAGCAACAATCTCCTGTTGGATTTAATATAATATTTCCTGCCATGATTGAATCTGCAATGAATTTCGATATGTATCTTCCCCTAGGAGCACCAGCCCTAGATGCTTTATTTCACAGAAGGGACTTTGAGCTTAAAAGAGGCTATGGAAGCAACTCAGAGGGGTGGAGAGCCTTCTTAGCATATATTTCAGAAGGACTTGGTTCACAGGATTGGGAGTTGGTCATGAAGTTCCAAAAGAAGAACGGGTCCTTGTTTAATTCGCCATCAACCACAGCTGCTGCTTTTACTCAACTTAAGAATGCTCATTGTCTTAAGTACCTACGTGCACTCTTAGAGAAGTGTGGCAATGCAGTTCCAATGGTTTATCCTCTAGATAACTATGCTCGTCTTTCTGTGGTTGCCAGTCTTGAAAGTTTGGGTATTGATCGACATTTCAGGGAGGAAATAAGAAGTGTACTGGATGAAACATACAGATGCTGGCAGCAGGGGGAGGAAGATATATTTTCAGATGCTGCCTCCTGTGCAATGGCATTTCGACTCTTACGTGTTCATGGATATGATATTTCTGCAGTCAATTTTCAGAAGATCGTTTCTTCAATTCCCTTGGGGGGGTATATGAAGGACATTGGTGCTGCCTTAGAATTGTTTAAGGCTTCAGAAATCATCATACATCCAGATGAATCGGTTCTTGAGAAACAAAATAACTGGATGAGTCAATTTCCTGAAACAGGAGTTATCCAATACTTCAACTCAGGCTCTTGTTTGAATATTGGAAATGAATATTTTCTAAAACTGGCAGTGGAAGACTTCAACATTTGCCAGTCTATACACCATAAAGAGCTCAACCATCTTTCAAGGTGGGTTGTGGAGAACAGATTAGACAAGCTAAAGTTTTCTAGGCAGAAACAGGCCTACTGTTACTTCTCTGCTGCTGCAAACCTTTTCCCTCCTGAACTATCAGATGCC

Protein Analysis

461

Amino Acids

51.92

Weight (kDa)

5.73

Isoelectric Point (pI)

51.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 340
AcsI RAATTY 4 cut(s) 10, 193, 394, 478
AcuI CTGAAG 1 cut(s) 1056
AfaI GTAC 3 cut(s) 6, 734, 873
AfiI CCNNNNNNNGG 3 cut(s) 1025, 1026, 1145
AflII CTTAAG 2 cut(s) 710, 728
AflIII ACRYGT 1 cut(s) 961
AloI GAACNNNNNNTCC 2 cut(s) 198, 230
AluBI AGCT 6 cut(s) 401, 407, 547, 692, 1258, 1303
AluI AGCT 6 cut(s) 401, 407, 547, 692, 1258, 1303
Alw21I GWGCWC 3 cut(s) 508, 745, 1260
Alw26I GTCTC 1 cut(s) 49
Alw44I GTGCAC 1 cut(s) 741
AlwNI CAGNNNCTG 3 cut(s) 695, 894, 929
Ama87I CYCGRG 1 cut(s) 52
AoxI GGCC 1 cut(s) 1326
ApaLI GTGCAC 1 cut(s) 741
ApeKI GCWGC 8 cut(s) 68, 692, 695, 898, 929, 1049, 1346, 1349
ApoI RAATTY 4 cut(s) 10, 193, 394, 478
Asp700I GAANNNNTTC 3 cut(s) 125, 1101, 1200
AspA2I CCTAGG 1 cut(s) 499
AspS9I GGNCC 3 cut(s) 181, 269, 663
AsuHPI GGTGA 2 cut(s) 121, 365
AvaI CYCGRG 1 cut(s) 52
AvaII GGWCC 3 cut(s) 181, 269, 663
AvrII CCTAGG 1 cut(s) 499
BaeGI GKGCMC 1 cut(s) 745
BanII GRGCYC 1 cut(s) 1260
BbsI GAAGAC 1 cut(s) 1227
Bbv12I GWGCWC 3 cut(s) 508, 745, 1260
BbvI GCAGC 8 cut(s) 80, 679, 682, 910, 916, 1036, 1333, 1336
BccI CCATC 3 cut(s) 251, 688, 1272
BciVI GTATCC 1 cut(s) 335
BcoDI GTCTC 1 cut(s) 49
BfaI CTAG 4 cut(s) 500, 515, 788, 1314
BfmI CTRYAG 1 cut(s) 984
BfrI CTTAAG 2 cut(s) 710, 728
BfuI GTATCC 1 cut(s) 335
BisI GCNGC 8 cut(s) 69, 693, 696, 899, 930, 1050, 1347, 1350
BlnI CCTAGG 1 cut(s) 499
BlsI GCNGC 8 cut(s) 70, 694, 697, 900, 931, 1051, 1348, 1351
Bme18I GGWCC 3 cut(s) 181, 269, 663
BmeT110I CYCGRG 1 cut(s) 52
BmgT120I GGNCC 3 cut(s) 181, 269, 663
BmiI GGNNCC 4 cut(s) 183, 207, 270, 664
BmsI GCATC 5 cut(s) 289, 508, 881, 916, 1369
BpiI GAAGAC 1 cut(s) 1227
Bpu10I CCTNAGC 1 cut(s) 316
BpuEI CTTGAG 1 cut(s) 1127
BsaAI YACGTR 2 cut(s) 740, 962
BsaBI GATNNNNATC 1 cut(s) 489
BsaJI CCNNGG 3 cut(s) 132, 499, 1020
BsaXI ACNNNNNCTCC 2 cut(s) 337, 367
Bsc4I CCNNNNNNNGG 3 cut(s) 1025, 1026, 1145
Bse1I ACTGG 6 cut(s) 24, 819, 879, 1127, 1215, 1237
Bse3DI GCAATG 4 cut(s) 183, 480, 769, 948
Bse8I GATNNNNATC 1 cut(s) 489
BseDI CCNNGG 3 cut(s) 132, 499, 1020
BseGI GGATG 4 cut(s) 280, 883, 1087, 1131
BseJI GATNNNNATC 1 cut(s) 489
BseLI CCNNNNNNNGG 3 cut(s) 1025, 1026, 1145
BseMI GCAATG 4 cut(s) 183, 480, 769, 948
BseMII CTCAG 2 cut(s) 585, 1182
BseNI ACTGG 6 cut(s) 24, 819, 879, 1127, 1215, 1237
BseSI GKGCMC 1 cut(s) 745
BseXI GCAGC 8 cut(s) 80, 679, 682, 910, 916, 1036, 1333, 1336
BshFI GGCC 1 cut(s) 1328
BsiHKAI GWGCWC 3 cut(s) 508, 745, 1260
BsiHKCI CYCGRG 1 cut(s) 52
BslFI GGGAC 4 cut(s) 35, 115, 167, 551
BslI CCNNNNNNNGG 3 cut(s) 1025, 1026, 1145
BsmAI GTCTC 1 cut(s) 49
BsmFI GGGAC 4 cut(s) 35, 115, 167, 551
BsmI GAATGC 1 cut(s) 721
BsnI GGCC 1 cut(s) 1328
BsoBI CYCGRG 1 cut(s) 52
Bsp1286I GDGCHC 3 cut(s) 508, 745, 1260
Bsp143I GATC 3 cut(s) 139, 841, 1002
BspACI CCGC 1 cut(s) 340
BspANI GGCC 1 cut(s) 1328
BspCNI CTCAG 2 cut(s) 584, 1181
BspHI TCATGA 1 cut(s) 639
BspLI GGNNCC 4 cut(s) 183, 207, 270, 664
BspMAI CTGCAG 1 cut(s) 988
BspQI GCTCTTC 1 cut(s) 411
BspTI CTTAAG 2 cut(s) 710, 728
BsrDI GCAATG 4 cut(s) 183, 480, 769, 948
BsrI ACTGG 6 cut(s) 24, 819, 879, 1127, 1215, 1237
BssECI CCNNGG 3 cut(s) 132, 499, 1020
BssMI GATC 3 cut(s) 139, 841, 1002
BssT1I CCWWGG 3 cut(s) 132, 499, 1020
Bst4CI ACNGT 2 cut(s) 49, 1334
Bst6I CTCTTC 2 cut(s) 46, 411
BstAFI CTTAAG 2 cut(s) 710, 728
BstBAI YACGTR 2 cut(s) 740, 962
BstC8I GCNNGC 1 cut(s) 896
BstDEI CTNAG 7 cut(s) 273, 316, 571, 592, 748, 1054, 1168
BstENI CCTNNNNNAGG 1 cut(s) 1143
BstF5I GGATG 4 cut(s) 280, 883, 1087, 1131
BstKTI GATC 3 cut(s) 142, 844, 1005
BstMAI GTCTC 1 cut(s) 49
BstMBI GATC 3 cut(s) 139, 841, 1002
BstMWI GCNNNNNNNGC 5 cut(s) 173, 518, 564, 593, 938
BstNSI RCATGY 1 cut(s) 324
BstSFI CTRYAG 1 cut(s) 984
BstSLI GKGCMC 1 cut(s) 745
BstV1I GCAGC 8 cut(s) 80, 679, 682, 910, 916, 1036, 1333, 1336
BstV2I GAAGAC 1 cut(s) 1227
BsuI GTATCC 1 cut(s) 335
BsuRI GGCC 1 cut(s) 1328
BtsCI GGATG 4 cut(s) 280, 883, 1087, 1131
BtsI GCAGTG 2 cut(s) 162, 1221
BtsIMutI CAGTG 2 cut(s) 162, 1221
Cac8I GCNNGC 1 cut(s) 896
CaiI CAGNNNCTG 3 cut(s) 695, 894, 929
CciI TCATGA 1 cut(s) 639
Cfr13I GGNCC 3 cut(s) 181, 269, 663
Csp6I GTAC 3 cut(s) 5, 733, 872
CviAII CATG 6 cut(s) 254, 264, 321, 460, 640, 968
CviQI GTAC 3 cut(s) 5, 733, 872
DdeI CTNAG 7 cut(s) 273, 316, 571, 592, 748, 1054, 1168
DpnI GATC 3 cut(s) 141, 843, 1004
DpnII GATC 3 cut(s) 139, 841, 1002
Eam1104I CTCTTC 2 cut(s) 46, 411
EarI CTCTTC 2 cut(s) 46, 411
Ecl136II GAGCTC 1 cut(s) 1258
Eco130I CCWWGG 3 cut(s) 132, 499, 1020
Eco147I AGGCCT 1 cut(s) 1328
Eco24I GRGCYC 1 cut(s) 1260
Eco47I GGWCC 3 cut(s) 181, 269, 663
Eco53kI GAGCTC 1 cut(s) 1258
Eco57I CTGAAG 1 cut(s) 1056
Eco88I CYCGRG 1 cut(s) 52
EcoICRI GAGCTC 1 cut(s) 1258
EcoNI CCTNNNNNAGG 1 cut(s) 1143
EcoO109I RGGNCCY 2 cut(s) 269, 663
EcoT14I CCWWGG 3 cut(s) 132, 499, 1020
EcoT38I GRGCYC 1 cut(s) 1260
ErhI CCWWGG 3 cut(s) 132, 499, 1020
FaeI CATG 6 cut(s) 257, 267, 324, 463, 643, 971
FaqI GGGAC 4 cut(s) 35, 115, 167, 551
FatI CATG 6 cut(s) 253, 263, 320, 459, 639, 967
FauNDI CATATG 1 cut(s) 157
Fnu4HI GCNGC 8 cut(s) 69, 693, 696, 899, 930, 1050, 1347, 1350
FokI GGATG 4 cut(s) 267, 890, 1074, 1138
FriOI GRGCYC 1 cut(s) 1260
Fsp4HI GCNGC 8 cut(s) 69, 693, 696, 899, 930, 1050, 1347, 1350
FspBI CTAG 4 cut(s) 500, 515, 788, 1314
GluI GCNGC 8 cut(s) 69, 693, 696, 899, 930, 1050, 1347, 1350
HaeIII GGCC 1 cut(s) 1328
Hin1II CATG 6 cut(s) 257, 267, 324, 463, 643, 971
HinfI GANTC 5 cut(s) 389, 467, 954, 1097, 1129
HphI GGTGA 2 cut(s) 121, 365
Hpy166II GTNNAC 4 cut(s) 129, 620, 743, 872
Hpy188I TCNGA 6 cut(s) 574, 607, 925, 999, 1075, 1378
Hpy188III TCNNGA 8 cut(s) 52, 640, 788, 824, 1091, 1106, 1139, 1367
Hpy8I GTNNAC 4 cut(s) 129, 620, 743, 872
HpyAV CCTTC 5 cut(s) 195, 528, 598, 602, 1030
HpyCH4III ACNGT 2 cut(s) 49, 1334
HpyCH4IV ACGT 2 cut(s) 739, 961
HpyCH4V TGCA 7 cut(s) 332, 473, 743, 767, 941, 986, 1352
HpyF10VI GCNNNNNNNGC 5 cut(s) 173, 518, 564, 593, 938
HpyF3I CTNAG 7 cut(s) 273, 316, 571, 592, 748, 1054, 1168
HpySE526I ACGT 2 cut(s) 739, 961
Hsp92II CATG 6 cut(s) 257, 267, 324, 463, 643, 971
Kzo9I GATC 3 cut(s) 139, 841, 1002
LguI GCTCTTC 1 cut(s) 411
LmnI GCTCC 1 cut(s) 503
Lsp1109I GCAGC 8 cut(s) 80, 679, 682, 910, 916, 1036, 1333, 1336
LweI GCATC 5 cut(s) 289, 508, 881, 916, 1369
MaeI CTAG 4 cut(s) 500, 515, 788, 1314
MaeII ACGT 2 cut(s) 739, 961
MaeIII GTNAC 1 cut(s) 1334
MalI GATC 3 cut(s) 141, 843, 1004
MboI GATC 3 cut(s) 139, 841, 1002
MhlI GDGCHC 3 cut(s) 508, 745, 1260
MlyI GAGTC 2 cut(s) 948, 1138
MmeI TCCRAC 1 cut(s) 415
MnlI CCTC 9 cut(s) 49, 91, 548, 568, 795, 850, 901, 943, 1374
MroXI GAANNNNTTC 3 cut(s) 125, 1101, 1200
MseI TTAA 8 cut(s) 290, 366, 441, 549, 672, 711, 729, 1065
MslI CAYNNNNRTG 3 cut(s) 889, 972, 1092
MspA1I CMGCKG 1 cut(s) 692
MspCI CTTAAG 2 cut(s) 710, 728
Mva1269I GAATGC 1 cut(s) 721
MwoI GCNNNNNNNGC 5 cut(s) 173, 518, 564, 593, 938
NdeI CATATG 1 cut(s) 157
NdeII GATC 3 cut(s) 139, 841, 1002
NlaIII CATG 6 cut(s) 257, 267, 324, 463, 643, 971
NlaIV GGNNCC 4 cut(s) 183, 207, 270, 664
NspI RCATGY 1 cut(s) 324
PagI TCATGA 1 cut(s) 639
PceI AGGCCT 1 cut(s) 1328
PciSI GCTCTTC 1 cut(s) 411
PcsI WCGNNNNNNNCGW 1 cut(s) 958
PctI GAATGC 1 cut(s) 721
PdmI GAANNNNTTC 3 cut(s) 125, 1101, 1200
PfeI GAWTC 3 cut(s) 389, 467, 1097
PkrI GCNGC 8 cut(s) 70, 694, 697, 900, 931, 1051, 1348, 1351
PleI GAGTC 2 cut(s) 948, 1137
PpsI GAGTC 2 cut(s) 948, 1137
Ppu21I YACGTR 2 cut(s) 740, 962
PpuMI RGGWCCY 2 cut(s) 269, 663
Psp124BI GAGCTC 1 cut(s) 1260
Psp5II RGGWCCY 2 cut(s) 269, 663
PspN4I GGNNCC 4 cut(s) 183, 207, 270, 664
PspPI GGNCC 3 cut(s) 181, 269, 663
PspPPI RGGWCCY 2 cut(s) 269, 663
PstI CTGCAG 1 cut(s) 988
PstNI CAGNNNCTG 3 cut(s) 695, 894, 929
PvuII CAGCTG 1 cut(s) 692
RsaI GTAC 3 cut(s) 6, 734, 873
RsaNI GTAC 3 cut(s) 5, 733, 872
RseI CAYNNNNRTG 3 cut(s) 889, 972, 1092
SacI GAGCTC 1 cut(s) 1260
SapI GCTCTTC 1 cut(s) 411
SaqAI TTAA 8 cut(s) 290, 366, 441, 549, 672, 711, 729, 1065
SatI GCNGC 8 cut(s) 69, 693, 696, 899, 930, 1050, 1347, 1350
Sau3AI GATC 3 cut(s) 139, 841, 1002
Sau96I GGNCC 3 cut(s) 181, 269, 663
SchI GAGTC 2 cut(s) 948, 1138
SduI GDGCHC 3 cut(s) 508, 745, 1260
SfaNI GCATC 5 cut(s) 289, 508, 881, 916, 1369
SfcI CTRYAG 1 cut(s) 984
SinI GGWCC 3 cut(s) 181, 269, 663
SmiMI CAYNNNNRTG 3 cut(s) 889, 972, 1092
SmlI CTYRAG 3 cut(s) 710, 728, 1106
SmoI CTYRAG 3 cut(s) 710, 728, 1106
SseBI AGGCCT 1 cut(s) 1328
SsiI CCGC 1 cut(s) 340
SspI AATATT 3 cut(s) 450, 1186, 1199
SspMI CTAG 4 cut(s) 500, 515, 788, 1314
SstI GAGCTC 1 cut(s) 1260
StuI AGGCCT 1 cut(s) 1328
StyI CCWWGG 3 cut(s) 132, 499, 1020
TaaI ACNGT 2 cut(s) 49, 1334
TaiI ACGT 2 cut(s) 742, 964
TaqI TCGA 3 cut(s) 483, 844, 952
TatI WGTACW 1 cut(s) 871
TfiI GAWTC 3 cut(s) 389, 467, 1097
Tru1I TTAA 8 cut(s) 290, 366, 441, 549, 672, 711, 729, 1065
Tru9I TTAA 8 cut(s) 290, 366, 441, 549, 672, 711, 729, 1065
TscAI CASTG 2 cut(s) 169, 1221
TseI GCWGC 8 cut(s) 68, 692, 695, 898, 929, 1049, 1346, 1349
TspRI CASTG 2 cut(s) 169, 1221
Vha464I CTTAAG 2 cut(s) 710, 728
VneI GTGCAC 1 cut(s) 741
VpaK11BI GGWCC 3 cut(s) 181, 269, 663
XagI CCTNNNNNAGG 1 cut(s) 1143
XapI RAATTY 4 cut(s) 10, 193, 394, 478
XbaI TCTAGA 1 cut(s) 787
XceI RCATGY 1 cut(s) 324
XmaJI CCTAGG 1 cut(s) 499
XmnI GAANNNNTTC 3 cut(s) 125, 1101, 1200
XspI CTAG 4 cut(s) 500, 515, 788, 1314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.