Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004593.1

Orthogroup ID

OG0001708

Physical Location & Seq

Genomic Coordinates Forward (+)

25285 .. 29030

Gene Structure 3746 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004593.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

atgttcagcaaggttgacctctctgtttcatcatatgacactgcttgggtggcaatgatcccttctccaaattccgggaaggagcctttcttccctgaatgcgtaaattggttgttagataatcaacttcatgatggctcatggggtcctcctaatccgcatcagttgttaacaaaagatgccctcttatccacgttagcatgcatccttgcactaaagcgatggaatattggtgaagaactaattgacaagggtctgcattttatccagtcaaatttagcttcagctactgatggagagcaaccatctcctgttgggtttgatataatatttccttccatgattgaatctgcaatgaatttggatgtgaatctacctttgggaggattaaccttagatgctttacttctcaggagagactttgagcttcaaagaggtaacagaagcaactcagaggggtggagagcctatctcgcttatatttcagaaggaatcggaaagtcacaggactgggagatggtcatgaagtaccagaagaagaatgggtccttgtttaactcaccatcaactactgctgctgcttttactcacctcaacaatgctggttgtcttaattatctacgctcactcatagaaaagtttgggagtgcagttccaacgatttatcctctagataactatgctcgcctttctatggtttccagtcttgaaagtatgggtgttgatcgacacttcagggaggaaataaggagtgtactcgatgaaacatacagatgctggctgcagggggatgaagatatattttcagatgctggcacctgtgctatggcatttcgactcttacgtcttcatggatatgatgtttctacagatccattaagtcaattttcagaagacagtttcttcaattcccttggtggatatctgaaggacactggtgctgccttagaactttttagggcttcagaagtcatcattcttccagatgaatcagttctagagaaacaacattactggacaagtcatttcttgaaacaggaattatcaaataacttaactcaggctcatagactcaataagcatattgatcaggtggatgatgctcttcggtttccttcctatgcaactctgggtcggttatcaagcaggaaagcaataaaatattacaacactgatatggaagacttcaatatgtgtcaatcgatacatctggaagaactcgagtatctttcaaggtgggttgtcgagagcagattagacaagctagaatttgctaggcagaagcaggcatactgttacttctctgctgctgcaacccttttccctcctgaactatcagatgcccgcatatcatgggccaaaaacggagtgcttacaactgtggttgatgatttctttgatgttggaggttctgaagaggaactagtaaaccttatacaattgatcgagaagtgggatgtgaatgcgagaactgattcttgttctgagcaagttgaaatcatattttcagcaattaagagcacaattaatgagattggagccaatgcattcccacggcaacagcgcagtgtaacaaatcactggttggatttggttaaatctatgctgaaggaagctcagtggttgataaacaatttggcgccggcactggatgaatacatggaaaatgcatatgtatcatttgccttgggaccgattgtgcttccagctctctatttggtagggcctaagctctcagaggaggctgtacggagttttgaattccaccagttgtataaacttatgagcacctgtgggcgtcttctcaatgatatgcaaacctttaagagggaatctgcggaagggaagctaaatgctgttacattggccatgcttcatggcaatggcagtgctactgaagaagagaccttaagtgagatgaagagcattataaccattaagaggagagaactgcaaagactagttttgcagaaggatagcttagttccaagagcttgcaaggacctgttttggaacatgtgcaaaatagtgcacctattttatgcaaagcacgatggattcactgggcatgacttgatgaaaaccgtaaatggactaaccgaagaaccgatcattctcagtgaattgaagtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009899 GO:0009987 GO:0010033 GO:0010333 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

710

Amino Acids

80.39

Weight (kDa)

5.17

Isoelectric Point (pI)

49.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001708)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79460
fragaria_vesca	FvH4_3g14116 FvH4_3g14130 FvH4_3g14131 FvH4_3g16270
malus_domestica	MD03G1187200.v1.1 MD10G1215700.v1.1 MD10G1215900.v1.1 MD10G1216200.v1.1
prunus_persica	Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128600_v2.0.a1 Prupe.4G128700_v2.0.a1
pyrus_communis	pycom03g13990 pycom10g18220
rosa_chinensis	RchiOBHm_Chr5g0023441 RchiOBHm_Chr5g0023471 RchiOBHm_Chr5g0023641
rosa_laevigata	RLG00000032721
rosa_multiflora	Rmu_co8406553.1_g000001 Rmu_sc0004593.1_g000004 Rmu_sc0005664.1_g000001 Rmu_sc0005664.1_g000005
rosa_roxburghii	Rroxscaffold_1G00055600 Rroxscaffold_1G00055620 Rroxscaffold_1G00055910
rosa_rugosa	Rorug05G0079200 Rorug05G0079300
rosa_samantha	Rh5AG166100 Rh5AG166200 Rh5AG166300 Rh5AG167600 Rh5AG168000 Rh5BG165300 Rh5BG165500 Rh5CG180300 Rh5CG180400 Rh5CG181400 Rh5DG166800 Rh5DG166900 Rh5DG167800
rosa_wichuraiana	Rw0G019600 Rw5G014950 Rw5G014970 Rw5G015110 Rw5G015120 Rw5G015210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1931
AasI	GACNNNNNNGTC	1 cut(s)	843
AccB1I	GGYRCC	2 cut(s)	815, 1639
AciI	CCGC	3 cut(s)	158, 1345, 1838
AclWI	GGATC	2 cut(s)	52, 866
AcoI	YGGCCR	1 cut(s)	1866
AcsI	RAATTY	5 cut(s)	70, 274, 358, 1268, 1760
AcuI	CTGAAG	7 cut(s)	267, 718, 947, 948, 1434, 1628, 1917
AcyI	GRCGYC	2 cut(s)	1640, 1798
AfaI	GTAC	3 cut(s)	530, 756, 1749
AfiI	CCNNNNNNNGG	5 cut(s)	74, 383, 694, 1827, 1941
AflII	CTTAAG	1 cut(s)	1909
AflIII	ACRYGT	1 cut(s)	2016
AhlI	ACTAGT	2 cut(s)	1423, 1960
AjuI	GAANNNNNNNTTGG	2 cut(s)	362, 394
Alw21I	GWGCWC	3 cut(s)	1523, 1790, 2034
Alw26I	GTCTC	2 cut(s)	411, 1898
Alw44I	GTGCAC	1 cut(s)	2030
AlwI	GGATC	2 cut(s)	52, 866
AlwNI	CAGNNNCTG	3 cut(s)	290, 777, 812
Ama87I	CYCGRG	1 cut(s)	1220
AoxI	GGCC	3 cut(s)	1356, 1724, 1866
ApaLI	GTGCAC	1 cut(s)	2030
ApeKI	GCWGC	6 cut(s)	575, 578, 781, 941, 1307, 1310
ApoI	RAATTY	5 cut(s)	70, 274, 358, 1268, 1760
AseI	ATTAAT	1 cut(s)	1527
Asp700I	GAANNNNTTC	2 cut(s)	993, 1474
AspLEI	GCGC	2 cut(s)	1566, 1642
AspS9I	GGNCC	6 cut(s)	146, 546, 1356, 1691, 1724, 2002
AsuC2I	CCSGG	1 cut(s)	76
AsuHPI	GGTGA	3 cut(s)	245, 552, 581
AvaI	CYCGRG	1 cut(s)	1220
AvaII	GGWCC	4 cut(s)	146, 546, 1691, 2002
BaeGI	GKGCMC	1 cut(s)	2034
BaeI	ACNNNNGTAYC	2 cut(s)	1208, 1241
BalI	TGGCCA	1 cut(s)	1868
BanI	GGYRCC	2 cut(s)	815, 1639
BarI	GAAGNNNNNNTAC	2 cut(s)	1274, 1306
BbsI	GAAGAC	4 cut(s)	839, 900, 1188, 1793
Bbv12I	GWGCWC	3 cut(s)	1523, 1790, 2034
BbvI	GCAGC	6 cut(s)	562, 565, 768, 928, 1294, 1297
BccI	CCATC	7 cut(s)	128, 216, 287, 313, 511, 571, 2048
BceAI	ACGGC	1 cut(s)	1571
BclI	TGATCA	1 cut(s)	1087
BcnI	CCSGG	1 cut(s)	76
BcoDI	GTCTC	2 cut(s)	411, 1898
BcuI	ACTAGT	2 cut(s)	1423, 1960
BfaI	CTAG	6 cut(s)	671, 998, 1265, 1275, 1424, 1961
BfmI	CTRYAG	2 cut(s)	782, 867
BfoI	RGCGCY	1 cut(s)	1643
BfrI	CTTAAG	1 cut(s)	1909
BisI	GCNGC	6 cut(s)	576, 579, 782, 942, 1308, 1311
BlsI	GCNGC	6 cut(s)	577, 580, 783, 943, 1309, 1312
Bme1390I	CCNGG	1 cut(s)	76
Bme18I	GGWCC	4 cut(s)	146, 546, 1691, 2002
BmeT110I	CYCGRG	1 cut(s)	1220
BmgT120I	GGNCC	6 cut(s)	146, 546, 1356, 1691, 1724, 2002
BmiI	GGNNCC	7 cut(s)	84, 147, 547, 817, 1540, 1641, 1692
BmrFI	CCNGG	1 cut(s)	76
BmrI	ACTGGG	2 cut(s)	520, 2073
BmsI	GCATC	8 cut(s)	169, 169, 213, 388, 764, 799, 1090, 1330
BmuI	ACTGGG	2 cut(s)	520, 2073
BoxI	GACNNNNGTC	1 cut(s)	252
BpiI	GAAGAC	4 cut(s)	839, 900, 1188, 1793
BplI	GAGNNNNNCTC	2 cut(s)	456, 488
Bpu10I	CCTNAGC	1 cut(s)	1728
BpuMI	CCSGG	1 cut(s)	76
Bsa29I	ATCGAT	1 cut(s)	1202
BsaBI	GATNNNNATC	1 cut(s)	369
BsaHI	GRCGYC	2 cut(s)	1640, 1798
BsaI	GGTCTC	1 cut(s)	1898
BsaJI	CCNNGG	3 cut(s)	913, 1553, 1686
Bsc4I	CCNNNNNNNGG	5 cut(s)	74, 383, 694, 1827, 1941
Bse118I	RCCGGY	1 cut(s)	1642
Bse1I	ACTGG	9 cut(s)	268, 515, 702, 940, 1019, 1586, 1653, 1768, 2068
Bse3DI	GCAATG	3 cut(s)	60, 360, 1888
Bse8I	GATNNNNATC	1 cut(s)	369
BseCI	ATCGAT	1 cut(s)	1202
BseDI	CCNNGG	3 cut(s)	913, 1553, 1686
BseGI	GGATG	6 cut(s)	204, 370, 796, 1102, 1462, 1657
BseJI	GATNNNNATC	1 cut(s)	369
BseLI	CCNNNNNNNGG	5 cut(s)	74, 383, 694, 1827, 1941
BseMI	GCAATG	3 cut(s)	60, 360, 1888
BseMII	CTCAG	7 cut(s)	424, 465, 1073, 1476, 1631, 1749, 2131
BseNI	ACTGG	9 cut(s)	268, 515, 702, 940, 1019, 1586, 1653, 1768, 2068
BseRI	GAGGAG	2 cut(s)	1754, 1957
BseSI	GKGCMC	1 cut(s)	2034
BseXI	GCAGC	6 cut(s)	562, 565, 768, 928, 1294, 1297
BsgI	GTGCAG	1 cut(s)	669
BshFI	GGCC	3 cut(s)	1358, 1726, 1868
BshNI	GGYRCC	2 cut(s)	815, 1639
BshVI	ATCGAT	1 cut(s)	1202
BsiHKAI	GWGCWC	3 cut(s)	1523, 1790, 2034
BsiHKCI	CYCGRG	1 cut(s)	1220
BsiSI	CCGG	2 cut(s)	75, 1643
BslFI	GGGAC	1 cut(s)	1704
BslI	CCNNNNNNNGG	5 cut(s)	74, 383, 694, 1827, 1941
BsmAI	GTCTC	2 cut(s)	411, 1898
BsmFI	GGGAC	1 cut(s)	1704
BsmI	GAATGC	3 cut(s)	104, 1468, 1547
BsnI	GGCC	3 cut(s)	1358, 1726, 1868
Bso31I	GGTCTC	1 cut(s)	1898
BsoBI	CYCGRG	1 cut(s)	1220
Bsp1286I	GDGCHC	3 cut(s)	1523, 1790, 2034
Bsp143I	GATC	6 cut(s)	57, 724, 871, 1087, 1443, 2109
BspACI	CCGC	3 cut(s)	158, 1345, 1838
BspANI	GGCC	3 cut(s)	1358, 1726, 1868
BspCNI	CTCAG	7 cut(s)	423, 464, 1072, 1477, 1630, 1748, 2130
BspDI	ATCGAT	1 cut(s)	1202
BspHI	TCATGA	2 cut(s)	130, 522
BspLI	GGNNCC	7 cut(s)	84, 147, 547, 817, 1540, 1641, 1692
BspMAI	CTGCAG	1 cut(s)	786
BspPI	GGATC	2 cut(s)	52, 866
BspQI	GCTCTTC	2 cut(s)	1110, 1916
BspT107I	GGYRCC	2 cut(s)	815, 1639
BspTI	CTTAAG	1 cut(s)	1909
BspTNI	GGTCTC	1 cut(s)	1898
BsrDI	GCAATG	3 cut(s)	60, 360, 1888
BsrFI	RCCGGY	1 cut(s)	1642
BsrI	ACTGG	9 cut(s)	268, 515, 702, 940, 1019, 1586, 1653, 1768, 2068
BssAI	RCCGGY	1 cut(s)	1642
BssECI	CCNNGG	3 cut(s)	913, 1553, 1686
BssMI	GATC	6 cut(s)	57, 724, 871, 1087, 1443, 2109
BssNI	GRCGYC	2 cut(s)	1640, 1798
BssT1I	CCWWGG	2 cut(s)	913, 1686
Bst4CI	ACNGT	4 cut(s)	899, 1295, 1381, 2086
Bst6I	CTCTTC	4 cut(s)	1110, 1410, 1896, 1916
BstACI	GRCGYC	2 cut(s)	1640, 1798
BstAFI	CTTAAG	1 cut(s)	1909
BstC8I	GCNNGC	8 cut(s)	202, 685, 779, 814, 1287, 1345, 1644, 1996
BstDSI	CCRYGG	1 cut(s)	1553
BstENI	CCTNNNNNAGG	2 cut(s)	381, 1825
BstF5I	GGATG	6 cut(s)	204, 370, 796, 1102, 1462, 1657
BstH2I	RGCGCY	1 cut(s)	1643
BstHHI	GCGC	2 cut(s)	1566, 1642
BstKTI	GATC	6 cut(s)	60, 727, 874, 1090, 1446, 2112
BstMAI	GTCTC	2 cut(s)	411, 1898
BstMBI	GATC	6 cut(s)	57, 724, 871, 1087, 1443, 2109
BstMWI	GCNNNNNNNGC	2 cut(s)	50, 473
BstNSI	RCATGY	2 cut(s)	204, 2020
BstPAI	GACNNNNGTC	1 cut(s)	252
BstSCI	CCNGG	1 cut(s)	74
BstSFI	CTRYAG	2 cut(s)	782, 867
BstSLI	GKGCMC	1 cut(s)	2034
BstV1I	GCAGC	6 cut(s)	562, 565, 768, 928, 1294, 1297
BstV2I	GAAGAC	4 cut(s)	839, 900, 1188, 1793
BstX2I	RGATCY	1 cut(s)	871
BstYI	RGATCY	1 cut(s)	871
Bsu15I	ATCGAT	1 cut(s)	1202
BsuRI	GGCC	3 cut(s)	1358, 1726, 1868
BsuTUI	ATCGAT	1 cut(s)	1202
BtgI	CCRYGG	1 cut(s)	1553
BtgZI	GCGATG	1 cut(s)	235
BtsCI	GGATG	6 cut(s)	204, 370, 796, 1102, 1462, 1657
BtsI	GCAGTG	3 cut(s)	39, 1573, 1894
Cac8I	GCNNGC	8 cut(s)	202, 685, 779, 814, 1287, 1345, 1644, 1996
CaiI	CAGNNNCTG	3 cut(s)	290, 777, 812
CciI	TCATGA	2 cut(s)	130, 522
CfoI	GCGC	2 cut(s)	1566, 1642
Cfr10I	RCCGGY	1 cut(s)	1642
Cfr13I	GGNCC	6 cut(s)	146, 546, 1356, 1691, 1724, 2002
ClaI	ATCGAT	1 cut(s)	1202
CseI	GACGC	1 cut(s)	1787
Csp6I	GTAC	3 cut(s)	529, 755, 1748
CviQI	GTAC	3 cut(s)	529, 755, 1748
DinI	GGCGCC	1 cut(s)	1641
DpnI	GATC	6 cut(s)	59, 726, 873, 1089, 1445, 2111
DpnII	GATC	6 cut(s)	57, 724, 871, 1087, 1443, 2109
DrdI	GACNNNNNNGTC	1 cut(s)	843
DseDI	GACNNNNNNGTC	1 cut(s)	843
EaeI	YGGCCR	1 cut(s)	1866
Eam1104I	CTCTTC	4 cut(s)	1110, 1410, 1896, 1916
EarI	CTCTTC	4 cut(s)	1110, 1410, 1896, 1916
Eco130I	CCWWGG	2 cut(s)	913, 1686
Eco31I	GGTCTC	1 cut(s)	1898
Eco32I	GATATC	1 cut(s)	923
Eco47I	GGWCC	4 cut(s)	146, 546, 1691, 2002
Eco57I	CTGAAG	7 cut(s)	267, 718, 947, 948, 1434, 1628, 1917
Eco88I	CYCGRG	1 cut(s)	1220
EcoNI	CCTNNNNNAGG	2 cut(s)	381, 1825
EcoO109I	RGGNCCY	4 cut(s)	146, 546, 1724, 2002
EcoRI	GAATTC	1 cut(s)	1760
EcoRV	GATATC	1 cut(s)	923
EcoT14I	CCWWGG	2 cut(s)	913, 1686
EcoT22I	ATGCAT	3 cut(s)	206, 1549, 1672
EgeI	GGCGCC	1 cut(s)	1641
EheI	GGCGCC	1 cut(s)	1641
ErhI	CCWWGG	2 cut(s)	913, 1686
FalI	AAGNNNNNCTT	2 cut(s)	1964, 1996
FaqI	GGGAC	1 cut(s)	1704
FauI	CCCGC	1 cut(s)	1352
FauNDI	CATATG	2 cut(s)	34, 1672
FbaI	TGATCA	1 cut(s)	1087
Fnu4HI	GCNGC	6 cut(s)	576, 579, 782, 942, 1308, 1311
FokI	GGATG	6 cut(s)	191, 377, 803, 1109, 1469, 1664
Fsp4HI	GCNGC	6 cut(s)	576, 579, 782, 942, 1308, 1311
FspBI	CTAG	6 cut(s)	671, 998, 1265, 1275, 1424, 1961
GlaI	GCGC	2 cut(s)	1565, 1641
GluI	GCNGC	6 cut(s)	576, 579, 782, 942, 1308, 1311
HaeII	RGCGCY	1 cut(s)	1643
HaeIII	GGCC	3 cut(s)	1358, 1726, 1868
HapII	CCGG	2 cut(s)	75, 1643
HgaI	GACGC	1 cut(s)	1787
HhaI	GCGC	2 cut(s)	1566, 1642
Hin1I	GRCGYC	2 cut(s)	1640, 1798
Hin6I	GCGC	2 cut(s)	1564, 1640
HinP1I	GCGC	2 cut(s)	1564, 1640
HincII	GTYRAC	2 cut(s)	16, 171
HindII	GTYRAC	2 cut(s)	16, 171
HinfI	GANTC	9 cut(s)	347, 370, 492, 837, 989, 1071, 1475, 1832, 2058
HpaI	GTTAAC	1 cut(s)	171
HpaII	CCGG	2 cut(s)	75, 1643
HphI	GGTGA	3 cut(s)	245, 552, 581
Hpy166II	GTNNAC	5 cut(s)	16, 171, 755, 1429, 2032
Hpy8I	GTNNAC	5 cut(s)	16, 171, 755, 1429, 2032
HpyAV	CCTTC	9 cut(s)	72, 73, 345, 482, 922, 1125, 1603, 1835, 1966
HpyCH4III	ACNGT	4 cut(s)	899, 1295, 1381, 2086
HpyCH4IV	ACGT	2 cut(s)	194, 844
HpyF10VI	GCNNNNNNNGC	2 cut(s)	50, 473
HpySE526I	ACGT	2 cut(s)	194, 844
Hsp92I	GRCGYC	2 cut(s)	1640, 1798
HspAI	GCGC	2 cut(s)	1564, 1640
KasI	GGCGCC	1 cut(s)	1639
KroI	GCCGGC	1 cut(s)	1642
KroNI	GCCGGC	1 cut(s)	1644
Ksp22I	TGATCA	1 cut(s)	1087
KspAI	GTTAAC	1 cut(s)	171
Kzo9I	GATC	6 cut(s)	57, 724, 871, 1087, 1443, 2109
LguI	GCTCTTC	2 cut(s)	1110, 1916
LmnI	GCTCC	2 cut(s)	82, 1538
Lsp1109I	GCAGC	6 cut(s)	562, 565, 768, 928, 1294, 1297
LweI	GCATC	8 cut(s)	169, 169, 213, 388, 764, 799, 1090, 1330
MaeI	CTAG	6 cut(s)	671, 998, 1265, 1275, 1424, 1961
MaeII	ACGT	2 cut(s)	194, 844
MaeIII	GTNAC	5 cut(s)	437, 501, 1295, 1570, 1858
MalI	GATC	6 cut(s)	59, 726, 873, 1089, 1445, 2111
MboI	GATC	6 cut(s)	57, 724, 871, 1087, 1443, 2109
MfeI	CAATTG	1 cut(s)	1439
MflI	RGATCY	1 cut(s)	871
MhlI	GDGCHC	3 cut(s)	1523, 1790, 2034
MlsI	TGGCCA	1 cut(s)	1868
MluNI	TGGCCA	1 cut(s)	1868
Mly113I	GGCGCC	1 cut(s)	1640
MlyI	GAGTC	2 cut(s)	831, 1065
MmeI	TCCRAC	3 cut(s)	680, 1384, 1566
Mox20I	TGGCCA	1 cut(s)	1868
Mph1103I	ATGCAT	3 cut(s)	206, 1549, 1672
MroNI	GCCGGC	1 cut(s)	1642
MroXI	GAANNNNTTC	2 cut(s)	993, 1474
MscI	TGGCCA	1 cut(s)	1868
MslI	CAYNNNNRTG	4 cut(s)	772, 855, 1175, 1881
Msp20I	TGGCCA	1 cut(s)	1868
MspCI	CTTAAG	1 cut(s)	1909
MspI	CCGG	2 cut(s)	75, 1643
MspR9I	CCNGG	1 cut(s)	76
MunI	CAATTG	1 cut(s)	1439
Mva1269I	GAATGC	3 cut(s)	104, 1468, 1547
MwoI	GCNNNNNNNGC	2 cut(s)	50, 473
NaeI	GCCGGC	1 cut(s)	1644
NarI	GGCGCC	1 cut(s)	1640
NciI	CCSGG	1 cut(s)	76
NdeI	CATATG	2 cut(s)	34, 1672
NdeII	GATC	6 cut(s)	57, 724, 871, 1087, 1443, 2109
NgoMIV	GCCGGC	1 cut(s)	1642
NlaIV	GGNNCC	7 cut(s)	84, 147, 547, 817, 1540, 1641, 1692
NmuCI	GTSAC	1 cut(s)	501
NsiI	ATGCAT	3 cut(s)	206, 1549, 1672
NspI	RCATGY	2 cut(s)	204, 2020
PaeI	GCATGC	1 cut(s)	204
PaeR7I	CTCGAG	1 cut(s)	1220
PagI	TCATGA	2 cut(s)	130, 522
PciI	ACATGT	1 cut(s)	2016
PciSI	GCTCTTC	2 cut(s)	1110, 1916
PcsI	WCGNNNNNNNCGW	1 cut(s)	841
PctI	GAATGC	3 cut(s)	104, 1468, 1547
PdiI	GCCGGC	1 cut(s)	1644
PdmI	GAANNNNTTC	2 cut(s)	993, 1474
PfeI	GAWTC	7 cut(s)	347, 370, 492, 989, 1475, 1832, 2058
PfoI	TCCNGGA	1 cut(s)	74
PkrI	GCNGC	6 cut(s)	577, 580, 783, 943, 1309, 1312
PleI	GAGTC	2 cut(s)	831, 1065
PluTI	GGCGCC	1 cut(s)	1643
PpsI	GAGTC	2 cut(s)	831, 1065
PpuMI	RGGWCCY	3 cut(s)	146, 546, 2002
PscI	ACATGT	1 cut(s)	2016
PshAI	GACNNNNGTC	1 cut(s)	252
PshBI	ATTAAT	1 cut(s)	1527
PsiI	TTATAA	1 cut(s)	1931
Psp5II	RGGWCCY	3 cut(s)	146, 546, 2002
PspN4I	GGNNCC	7 cut(s)	84, 147, 547, 817, 1540, 1641, 1692
PspPI	GGNCC	6 cut(s)	146, 546, 1356, 1691, 1724, 2002
PspPPI	RGGWCCY	3 cut(s)	146, 546, 2002
PspXI	VCTCGAGB	1 cut(s)	1220
PstI	CTGCAG	1 cut(s)	786
PstNI	CAGNNNCTG	3 cut(s)	290, 777, 812
PsuI	RGATCY	1 cut(s)	871
RsaI	GTAC	3 cut(s)	530, 756, 1749
RsaNI	GTAC	3 cut(s)	529, 755, 1748
RseI	CAYNNNNRTG	4 cut(s)	772, 855, 1175, 1881
SapI	GCTCTTC	2 cut(s)	1110, 1916
SatI	GCNGC	6 cut(s)	576, 579, 782, 942, 1308, 1311
Sau3AI	GATC	6 cut(s)	57, 724, 871, 1087, 1443, 2109
Sau96I	GGNCC	6 cut(s)	146, 546, 1356, 1691, 1724, 2002
SchI	GAGTC	2 cut(s)	831, 1065
ScrFI	CCNGG	1 cut(s)	76
SduI	GDGCHC	3 cut(s)	1523, 1790, 2034
SfaNI	GCATC	8 cut(s)	169, 169, 213, 388, 764, 799, 1090, 1330
SfcI	CTRYAG	2 cut(s)	782, 867
SfoI	GGCGCC	1 cut(s)	1641
Sfr274I	CTCGAG	1 cut(s)	1220
SinI	GGWCC	4 cut(s)	146, 546, 1691, 2002
SlaI	CTCGAG	1 cut(s)	1220
SmiMI	CAYNNNNRTG	4 cut(s)	772, 855, 1175, 1881
SmlI	CTYRAG	2 cut(s)	1220, 1909
SmoI	CTYRAG	2 cut(s)	1220, 1909
SpeI	ACTAGT	2 cut(s)	1423, 1960
SphI	GCATGC	1 cut(s)	204
SsiI	CCGC	3 cut(s)	158, 1345, 1838
SspDI	GGCGCC	1 cut(s)	1639
SspI	AATATT	3 cut(s)	229, 330, 1163
SspMI	CTAG	6 cut(s)	671, 998, 1265, 1275, 1424, 1961
StyD4I	CCNGG	1 cut(s)	74
StyI	CCWWGG	2 cut(s)	913, 1686
TaaI	ACNGT	4 cut(s)	899, 1295, 1381, 2086
TaiI	ACGT	2 cut(s)	197, 847
TaqI	TCGA	7 cut(s)	727, 759, 835, 1202, 1221, 1245, 1446
TaqII	GACCGA	1 cut(s)	1708
TatI	WGTACW	1 cut(s)	754
TfiI	GAWTC	7 cut(s)	347, 370, 492, 989, 1475, 1832, 2058
TseFI	GTSAC	1 cut(s)	501
TseI	GCWGC	6 cut(s)	575, 578, 781, 941, 1307, 1310
Tsp45I	GTSAC	1 cut(s)	501
TspGWI	ACGGA	2 cut(s)	1380, 1765
Vha464I	CTTAAG	1 cut(s)	1909
VneI	GTGCAC	1 cut(s)	2030
VpaK11BI	GGWCC	4 cut(s)	146, 546, 1691, 2002
VspI	ATTAAT	1 cut(s)	1527
XagI	CCTNNNNNAGG	2 cut(s)	381, 1825
XapI	RAATTY	5 cut(s)	70, 274, 358, 1268, 1760
XbaI	TCTAGA	2 cut(s)	670, 997
XceI	RCATGY	2 cut(s)	204, 2020
XcmI	CCANNNNNNNNNTGG	1 cut(s)	539
XhoI	CTCGAG	1 cut(s)	1220
XmnI	GAANNNNTTC	2 cut(s)	993, 1474
XspI	CTAG	6 cut(s)	671, 998, 1265, 1275, 1424, 1961
Zsp2I	ATGCAT	3 cut(s)	206, 1549, 1672

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.