Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001708

Physical Location & Seq

Genomic Coordinates Reverse (-)

77603804 .. 77612009

Gene Structure 8206 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00055910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGGTCATGAAGTACCAAAGGAAGAACGGGTCTTTGTTTAATTCGCCATCAACTACTGCTTGTGCTTTTATTCACAGTAAGAGTGCTGGTTGTCTTGATTACCTATGCGCACTCATAGAAAAGTTTGGGAATGCAGTTCCAACAGTTTATCCTCTGGATCACTATGCTCGTCTTTCTATGGTTTCAACTCTTGATAGTTTGGGTATTGATCGACACTTCAGGGAGGAAATTAGGAGTGTACTGGATGAAACATACAGATGCTGGCTGCAGGGTGATGAAGATATATTTTCAGATGCTGGCACCTGTGCTATGGCATTTCAACTCTTACGTGTTAATGGATATGATGTCTCTGCAGATCGGTTAAATCAATTTTCAGAAGACCATTTCTTTGATTCCCTTGGAGGATATCTAAGGGACGCTGATGCTGCATTAGAACTGTTTAGGGCATCGGAAGTCATCATACATCCAGATGAATCAGTTCTAGAGAAACAAAATTACTGGACAAGGAATTTCCTAAAACAGGAATTTTCTAATAATTTAACTCAGACTCACAGAATCAATAAGCATATTGGCCTAGAGGTGGATGATGCTCTTAAGTTTCCTTCCTATGCAACATTGGGTCGGTTGTCGAGCAGGAGAGCAATGATATCTTACTACACCAACAGTACAAGGATTTTAAAATCTTCTTATCGTTGTTTGAATATTGGGAATGAAGACTTCCTAAAAATGGCAGTGGAGGACTTCAATATGTGCCAATCGATACATCGGGAAGAACTCAAGCATCTCTCAAGGTGGGTTATCGAGAGCAGATTGGACAAGCTAATATTTGCCAGGCAGAAGCTGGCTTACTGTTATTTCACTGCTGCTGGAACCCTTTTCCCTCCTGAGCTATTAGATGCTCGCATATCATGGGCCAAAAACGGAGTACTTACAACTGTGGTCGATGATTTCTTTGACGTTGGAGGTTCCGAAGAGGAACTAGTAAACCTTATACAAATGGTTGAGAAGTGGGATGTGAATCCAATAACCGATTCTTGCTCCGAGAATGTTGAAATTGTTTTTTCAGCAATTAAGAGCTTAGTTAGTGAGATTGGCATCAATGCATTCGCAAGGCAAGAGCGCAGTGTGACAAATCACGTCATTGAGATTTGGTTGGATTTGCTCAAGGCTATGCTGAAGGAAGCTAAGTGGTTGATAAACAAGTCGGCGCCAACGATGGAGGAATACATGGAAAATGCGTACGTCTCATTTGCCTTGGGACCTAATGTCCTTTCAAATCTCTATTTGGTAGGGCCTAAGCTCTCAGAGGATGCTGTACGGAGTGCAGAATACTACCATCTGTATAGACTAATGAGCACTTTTGGGCGTCTTCTCAATGATATGCAAAGCTATAAGAGGGAAGCTGTGGAAGGGAAGCTAAATGCTGTAACATTGGCCATGATTCATGGCAATGCTAGCGTTAGCGAAGAAGAGGCCATCAATGAGATGAAGACCATTATCACCAGTAAGAGGAGAGAACTGCAAAGACTAGTTTTGCAGGACAAGGATAGTGTAGTTCCAAGAGCTTGCAAGGATCTGTTTTGGAACATGGGCAATATTTTGCATCTATTTTATGAAAGGCACGATGGATACACCGCGCATGACATGATGAAAACTGTAAATGAAGTAACCGAAGAGCCCATCATTCTCAACGAATTGCAAAGCAGAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009899 GO:0009987 GO:0010033 GO:0010333 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

570

Amino Acids

65.36

Weight (kDa)

5.51

Isoelectric Point (pI)

50.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	2 - 190	6.4e-39	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	270 - 505	4.4e-67	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	308 - 505	4.7e-42	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001708)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79460
fragaria_vesca	FvH4_3g14116 FvH4_3g14130 FvH4_3g14131 FvH4_3g16270
malus_domestica	MD03G1187200.v1.1 MD10G1215700.v1.1 MD10G1215900.v1.1 MD10G1216200.v1.1
prunus_persica	Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128600_v2.0.a1 Prupe.4G128700_v2.0.a1
pyrus_communis	pycom03g13990 pycom10g18220
rosa_chinensis	RchiOBHm_Chr5g0023441 RchiOBHm_Chr5g0023471 RchiOBHm_Chr5g0023641
rosa_laevigata	RLG00000032721
rosa_multiflora	Rmu_co8406553.1_g000001 Rmu_sc0004593.1_g000004 Rmu_sc0005664.1_g000001 Rmu_sc0005664.1_g000005
rosa_roxburghii	Rroxscaffold_1G00055600 Rroxscaffold_1G00055620 Rroxscaffold_1G00055910
rosa_rugosa	Rorug05G0079200 Rorug05G0079300
rosa_samantha	Rh5AG166100 Rh5AG166200 Rh5AG166300 Rh5AG167600 Rh5AG168000 Rh5BG165300 Rh5BG165500 Rh5CG180300 Rh5CG180400 Rh5CG181400 Rh5DG166800 Rh5DG166900 Rh5DG167800
rosa_wichuraiana	Rw0G019600 Rw5G014950 Rw5G014970 Rw5G015110 Rw5G015120 Rw5G015210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	109
AccB1I	GGYRCC	2 cut(s)	299, 1207
AccII	CGCG	1 cut(s)	1637
AciI	CCGC	1 cut(s)	1635
AclWI	GGATC	2 cut(s)	165, 1581
AcoI	YGGCCR	1 cut(s)	1434
AcsI	RAATTY	2 cut(s)	508, 524
AcuI	CTGAAG	2 cut(s)	202, 1196
AcyI	GRCGYC	2 cut(s)	1208, 1366
AfaI	GTAC	6 cut(s)	14, 240, 667, 927, 1241, 1317
AfiI	CCNNNNNNNGG	4 cut(s)	520, 580, 727, 1509
AflII	CTTAAG	1 cut(s)	593
AflIII	ACRYGT	1 cut(s)	328
AgsI	TTSAA	6 cut(s)	186, 320, 700, 745, 1052, 1275
AhdI	GACNNNNNGTC	1 cut(s)	1265
AhlI	ACTAGT	2 cut(s)	979, 1528
AjiI	CACGTC	1 cut(s)	1138
AjnI	CCWGG	1 cut(s)	830
AjuI	GAANNNNNNNTTGG	2 cut(s)	1015, 1047
Alw21I	GWGCWC	1 cut(s)	1358
Alw26I	GTCTC	2 cut(s)	352, 1249
AlwI	GGATC	2 cut(s)	165, 1581
AlwNI	CAGNNNCTG	3 cut(s)	261, 296, 841
AoxI	GGCC	5 cut(s)	571, 912, 1292, 1434, 1473
ApeKI	GCWGC	3 cut(s)	265, 425, 863
ApoI	RAATTY	2 cut(s)	508, 524
ArsI	GACNNNNNNTTYG	2 cut(s)	371, 403
Asp700I	GAANNNNTTC	1 cut(s)	477
AspLEI	GCGC	4 cut(s)	110, 1122, 1210, 1639
AspS9I	GGNCC	3 cut(s)	912, 1259, 1292
AsuHPI	GGTGA	2 cut(s)	284, 1492
AsuNHI	GCTAGC	1 cut(s)	1454
AvaII	GGWCC	1 cut(s)	1259
BalI	TGGCCA	1 cut(s)	1436
BanI	GGYRCC	2 cut(s)	299, 1207
BanII	GRGCYC	1 cut(s)	1680
BarI	GAAGNNNNNNTAC	4 cut(s)	444, 476, 830, 862
BbsI	GAAGAC	4 cut(s)	384, 720, 1361, 1496
Bbv12I	GWGCWC	1 cut(s)	1358
BbvI	GCAGC	3 cut(s)	252, 412, 850
BccI	CCATC	6 cut(s)	55, 1210, 1344, 1484, 1619, 1688
BciT130I	CCWGG	1 cut(s)	832
BciVI	GTATCC	1 cut(s)	1622
BcoDI	GTCTC	2 cut(s)	352, 1249
BcuI	ACTAGT	2 cut(s)	979, 1528
BfaI	CTAG	5 cut(s)	482, 575, 980, 1455, 1529
BfmI	CTRYAG	2 cut(s)	266, 351
BfoI	RGCGCY	1 cut(s)	1211
BfrI	CTTAAG	1 cut(s)	593
BfuI	GTATCC	1 cut(s)	1622
BisI	GCNGC	3 cut(s)	266, 426, 864
BlsI	GCNGC	3 cut(s)	267, 427, 865
BmcAI	AGTACT	1 cut(s)	927
Bme1390I	CCNGG	1 cut(s)	832
Bme18I	GGWCC	1 cut(s)	1259
BmeRI	GACNNNNNGTC	1 cut(s)	1265
BmgBI	CACGTC	1 cut(s)	1138
BmgT120I	GGNCC	3 cut(s)	912, 1259, 1292
BmiI	GGNNCC	5 cut(s)	301, 871, 967, 1209, 1260
BmrFI	CCNGG	1 cut(s)	832
BmtI	GCTAGC	1 cut(s)	1458
BpiI	GAAGAC	4 cut(s)	384, 720, 1361, 1496
Bpu10I	CCTNAGC	2 cut(s)	885, 1296
BpuEI	CTTGAG	3 cut(s)	761, 772, 1148
Bsa29I	ATCGAT	1 cut(s)	758
BsaAI	YACGTR	1 cut(s)	329
BsaBI	GATNNNNATC	2 cut(s)	1017, 1094
BsaHI	GRCGYC	2 cut(s)	1208, 1366
BsaJI	CCNNGG	2 cut(s)	397, 1254
Bsc4I	CCNNNNNNNGG	4 cut(s)	520, 580, 727, 1509
Bse1I	ACTGG	3 cut(s)	246, 503, 1503
Bse3DI	GCAATG	2 cut(s)	648, 1456
Bse8I	GATNNNNATC	2 cut(s)	1017, 1094
BseBI	CCWGG	1 cut(s)	832
BseCI	ATCGAT	1 cut(s)	758
BseDI	CCNNGG	2 cut(s)	397, 1254
BseGI	GGATG	5 cut(s)	250, 463, 589, 1018, 1315
BseJI	GATNNNNATC	2 cut(s)	1017, 1094
BseLI	CCNNNNNNNGG	4 cut(s)	520, 580, 727, 1509
BseMI	GCAATG	2 cut(s)	648, 1456
BseMII	CTCAG	3 cut(s)	557, 876, 1317
BseNI	ACTGG	3 cut(s)	246, 503, 1503
BseRI	GAGGAG	1 cut(s)	1525
BseXI	GCAGC	3 cut(s)	252, 412, 850
BsgI	GTGCAG	1 cut(s)	1344
Bsh1236I	CGCG	1 cut(s)	1637
BshFI	GGCC	5 cut(s)	573, 914, 1294, 1436, 1475
BshNI	GGYRCC	2 cut(s)	299, 1207
BshVI	ATCGAT	1 cut(s)	758
BsiHKAI	GWGCWC	1 cut(s)	1358
BsiWI	CGTACG	1 cut(s)	1239
BslFI	GGGAC	2 cut(s)	428, 1272
BslI	CCNNNNNNNGG	4 cut(s)	520, 580, 727, 1509
BsmAI	GTCTC	2 cut(s)	352, 1249
BsmBI	CGTCTC	1 cut(s)	1249
BsmFI	GGGAC	2 cut(s)	428, 1272
BsmI	GAATGC	2 cut(s)	136, 1103
BsnI	GGCC	5 cut(s)	573, 914, 1294, 1436, 1475
Bsp1286I	GDGCHC	2 cut(s)	1358, 1680
Bsp143I	GATC	4 cut(s)	157, 208, 355, 1573
BspACI	CCGC	1 cut(s)	1635
BspANI	GGCC	5 cut(s)	573, 914, 1294, 1436, 1475
BspCNI	CTCAG	3 cut(s)	556, 877, 1316
BspDI	ATCGAT	1 cut(s)	758
BspFNI	CGCG	1 cut(s)	1637
BspHI	TCATGA	1 cut(s)	6
BspLI	GGNNCC	5 cut(s)	301, 871, 967, 1209, 1260
BspMAI	CTGCAG	2 cut(s)	270, 355
BspOI	GCTAGC	1 cut(s)	1458
BspPI	GGATC	2 cut(s)	165, 1581
BspQI	GCTCTTC	1 cut(s)	1668
BspT107I	GGYRCC	2 cut(s)	299, 1207
BspTI	CTTAAG	1 cut(s)	593
BsrDI	GCAATG	2 cut(s)	648, 1456
BsrI	ACTGG	3 cut(s)	246, 503, 1503
BssECI	CCNNGG	2 cut(s)	397, 1254
BssMI	GATC	4 cut(s)	157, 208, 355, 1573
BssNI	GRCGYC	2 cut(s)	1208, 1366
BssT1I	CCWWGG	2 cut(s)	397, 1254
Bst2UI	CCWGG	1 cut(s)	832
Bst4CI	ACNGT	7 cut(s)	77, 145, 438, 665, 851, 937, 1657
Bst6I	CTCTTC	3 cut(s)	966, 1464, 1668
BstACI	GRCGYC	2 cut(s)	1208, 1366
BstAFI	CTTAAG	1 cut(s)	593
BstBAI	YACGTR	1 cut(s)	329
BstC8I	GCNNGC	6 cut(s)	263, 298, 843, 901, 1456, 1567
BstDEI	CTNAG	7 cut(s)	410, 543, 885, 1078, 1185, 1296, 1303
BstENI	CCTNNNNNAGG	1 cut(s)	518
BstF5I	GGATG	5 cut(s)	250, 463, 589, 1018, 1315
BstFNI	CGCG	1 cut(s)	1637
BstH2I	RGCGCY	1 cut(s)	1211
BstHHI	GCGC	4 cut(s)	110, 1122, 1210, 1639
BstKTI	GATC	4 cut(s)	160, 211, 358, 1576
BstMAI	GTCTC	2 cut(s)	352, 1249
BstMBI	GATC	4 cut(s)	157, 208, 355, 1573
BstMWI	GCNNNNNNNGC	2 cut(s)	425, 1455
BstNI	CCWGG	1 cut(s)	832
BstSCI	CCNGG	1 cut(s)	830
BstSFI	CTRYAG	2 cut(s)	266, 351
BstUI	CGCG	1 cut(s)	1637
BstV1I	GCAGC	3 cut(s)	252, 412, 850
BstV2I	GAAGAC	4 cut(s)	384, 720, 1361, 1496
BstX2I	RGATCY	1 cut(s)	1573
BstYI	RGATCY	1 cut(s)	1573
Bsu15I	ATCGAT	1 cut(s)	758
BsuI	GTATCC	1 cut(s)	1622
BsuRI	GGCC	5 cut(s)	573, 914, 1294, 1436, 1475
BsuTUI	ATCGAT	1 cut(s)	758
BtrI	CACGTC	1 cut(s)	1138
BtsCI	GGATG	5 cut(s)	250, 463, 589, 1018, 1315
BtsI	GCAGTG	3 cut(s)	738, 858, 1129
BtsIMutI	CAGTG	3 cut(s)	738, 858, 1129
Cac8I	GCNNGC	6 cut(s)	263, 298, 843, 901, 1456, 1567
CaiI	CAGNNNCTG	3 cut(s)	261, 296, 841
CciI	TCATGA	1 cut(s)	6
CfoI	GCGC	4 cut(s)	110, 1122, 1210, 1639
Cfr13I	GGNCC	3 cut(s)	912, 1259, 1292
ClaI	ATCGAT	1 cut(s)	758
CseI	GACGC	2 cut(s)	425, 1355
Csp6I	GTAC	6 cut(s)	13, 239, 666, 926, 1240, 1316
CviAII	CATG	8 cut(s)	7, 909, 1228, 1438, 1445, 1588, 1640, 1645
CviQI	GTAC	6 cut(s)	13, 239, 666, 926, 1240, 1316
DdeI	CTNAG	7 cut(s)	410, 543, 885, 1078, 1185, 1296, 1303
DinI	GGCGCC	1 cut(s)	1209
DpnI	GATC	4 cut(s)	159, 210, 357, 1575
DpnII	GATC	4 cut(s)	157, 208, 355, 1573
DraI	TTTAAA	1 cut(s)	678
DriI	GACNNNNNGTC	1 cut(s)	1265
EaeI	YGGCCR	1 cut(s)	1434
Eam1104I	CTCTTC	3 cut(s)	966, 1464, 1668
Eam1105I	GACNNNNNGTC	1 cut(s)	1265
EarI	CTCTTC	3 cut(s)	966, 1464, 1668
Eco130I	CCWWGG	2 cut(s)	397, 1254
Eco24I	GRGCYC	1 cut(s)	1680
Eco32I	GATATC	2 cut(s)	407, 648
Eco47I	GGWCC	1 cut(s)	1259
Eco57I	CTGAAG	2 cut(s)	202, 1196
EcoNI	CCTNNNNNAGG	1 cut(s)	518
EcoO109I	RGGNCCY	2 cut(s)	1259, 1292
EcoRII	CCWGG	1 cut(s)	830
EcoRV	GATATC	2 cut(s)	407, 648
EcoT14I	CCWWGG	2 cut(s)	397, 1254
EcoT22I	ATGCAT	1 cut(s)	1105
EcoT38I	GRGCYC	1 cut(s)	1680
EgeI	GGCGCC	1 cut(s)	1209
EheI	GGCGCC	1 cut(s)	1209
ErhI	CCWWGG	2 cut(s)	397, 1254
Esp3I	CGTCTC	1 cut(s)	1249
FaeI	CATG	8 cut(s)	10, 912, 1231, 1441, 1448, 1591, 1643, 1648
FaqI	GGGAC	2 cut(s)	428, 1272
FatI	CATG	8 cut(s)	6, 908, 1227, 1437, 1444, 1587, 1639, 1644
Fnu4HI	GCNGC	3 cut(s)	266, 426, 864
FokI	GGATG	5 cut(s)	257, 450, 596, 1025, 1322
FriOI	GRGCYC	1 cut(s)	1680
Fsp4HI	GCNGC	3 cut(s)	266, 426, 864
FspAI	RTGCGCAY	1 cut(s)	109
FspBI	CTAG	5 cut(s)	482, 575, 980, 1455, 1529
FspI	TGCGCA	1 cut(s)	109
GlaI	GCGC	4 cut(s)	109, 1121, 1209, 1638
GluI	GCNGC	3 cut(s)	266, 426, 864
HaeII	RGCGCY	1 cut(s)	1211
HaeIII	GGCC	5 cut(s)	573, 914, 1294, 1436, 1475
HgaI	GACGC	2 cut(s)	425, 1355
HhaI	GCGC	4 cut(s)	110, 1122, 1210, 1639
Hin1I	GRCGYC	2 cut(s)	1208, 1366
Hin1II	CATG	8 cut(s)	10, 912, 1231, 1441, 1448, 1591, 1643, 1648
Hin6I	GCGC	4 cut(s)	108, 1120, 1208, 1637
HinP1I	GCGC	4 cut(s)	108, 1120, 1208, 1637
HinfI	GANTC	7 cut(s)	392, 473, 547, 555, 1018, 1031, 1441
HphI	GGTGA	2 cut(s)	284, 1492
Hpy166II	GTNNAC	2 cut(s)	239, 985
Hpy188I	TCNGA	7 cut(s)	292, 376, 451, 546, 970, 1042, 1306
Hpy188III	TCNNGA	9 cut(s)	7, 95, 155, 191, 467, 482, 767, 802, 884
Hpy8I	GTNNAC	2 cut(s)	239, 985
HpyAV	CCTTC	3 cut(s)	612, 1171, 1403
HpyCH4III	ACNGT	7 cut(s)	77, 145, 438, 665, 851, 937, 1657
HpyCH4IV	ACGT	4 cut(s)	328, 957, 1137, 1242
HpyF10VI	GCNNNNNNNGC	2 cut(s)	425, 1455
HpyF3I	CTNAG	7 cut(s)	410, 543, 885, 1078, 1185, 1296, 1303
HpySE526I	ACGT	4 cut(s)	328, 957, 1137, 1242
Hsp92I	GRCGYC	2 cut(s)	1208, 1366
Hsp92II	CATG	8 cut(s)	10, 912, 1231, 1441, 1448, 1591, 1643, 1648
HspAI	GCGC	4 cut(s)	108, 1120, 1208, 1637
KasI	GGCGCC	1 cut(s)	1207
Kzo9I	GATC	4 cut(s)	157, 208, 355, 1573
LguI	GCTCTTC	1 cut(s)	1668
LmnI	GCTCC	1 cut(s)	1043
Lsp1109I	GCAGC	3 cut(s)	252, 412, 850
MaeI	CTAG	5 cut(s)	482, 575, 980, 1455, 1529
MaeII	ACGT	4 cut(s)	328, 957, 1137, 1242
MaeIII	GTNAC	3 cut(s)	1126, 1426, 1666
MalI	GATC	4 cut(s)	159, 210, 357, 1575
MboI	GATC	4 cut(s)	157, 208, 355, 1573
MflI	RGATCY	1 cut(s)	1573
MhlI	GDGCHC	2 cut(s)	1358, 1680
MlsI	TGGCCA	1 cut(s)	1436
MluNI	TGGCCA	1 cut(s)	1436
Mly113I	GGCGCC	1 cut(s)	1208
MlyI	GAGTC	1 cut(s)	541
MmeI	TCCRAC	3 cut(s)	164, 940, 1134
Mox20I	TGGCCA	1 cut(s)	1436
Mph1103I	ATGCAT	1 cut(s)	1105
MroXI	GAANNNNTTC	1 cut(s)	477
MscI	TGGCCA	1 cut(s)	1436
MseI	TTAA	7 cut(s)	39, 333, 362, 539, 594, 677, 1071
MslI	CAYNNNNRTG	3 cut(s)	256, 468, 1449
Msp20I	TGGCCA	1 cut(s)	1436
MspCI	CTTAAG	1 cut(s)	593
MspR9I	CCNGG	1 cut(s)	832
Mva1269I	GAATGC	2 cut(s)	136, 1103
MvaI	CCWGG	1 cut(s)	832
MvnI	CGCG	1 cut(s)	1637
MwoI	GCNNNNNNNGC	2 cut(s)	425, 1455
NarI	GGCGCC	1 cut(s)	1208
NdeII	GATC	4 cut(s)	157, 208, 355, 1573
NheI	GCTAGC	1 cut(s)	1454
NlaIII	CATG	8 cut(s)	10, 912, 1231, 1441, 1448, 1591, 1643, 1648
NlaIV	GGNNCC	5 cut(s)	301, 871, 967, 1209, 1260
NmuCI	GTSAC	1 cut(s)	1126
NsbI	TGCGCA	1 cut(s)	109
NsiI	ATGCAT	1 cut(s)	1105
PagI	TCATGA	1 cut(s)	6
PciSI	GCTCTTC	1 cut(s)	1668
PcsI	WCGNNNNNNNCGW	1 cut(s)	1211
PctI	GAATGC	2 cut(s)	136, 1103
PdmI	GAANNNNTTC	1 cut(s)	477
PfeI	GAWTC	6 cut(s)	392, 473, 555, 1018, 1031, 1441
Pfl23II	CGTACG	1 cut(s)	1239
PkrI	GCNGC	3 cut(s)	267, 427, 865
PleI	GAGTC	1 cut(s)	541
PluTI	GGCGCC	1 cut(s)	1211
PpsI	GAGTC	1 cut(s)	541
Ppu21I	YACGTR	1 cut(s)	329
PpuMI	RGGWCCY	1 cut(s)	1259
Psp5II	RGGWCCY	1 cut(s)	1259
Psp6I	CCWGG	1 cut(s)	830
PspGI	CCWGG	1 cut(s)	830
PspLI	CGTACG	1 cut(s)	1239
PspN4I	GGNNCC	5 cut(s)	301, 871, 967, 1209, 1260
PspPI	GGNCC	3 cut(s)	912, 1259, 1292
PspPPI	RGGWCCY	1 cut(s)	1259
PstI	CTGCAG	2 cut(s)	270, 355
PstNI	CAGNNNCTG	3 cut(s)	261, 296, 841
PsuI	RGATCY	1 cut(s)	1573
RsaI	GTAC	6 cut(s)	14, 240, 667, 927, 1241, 1317
RsaNI	GTAC	6 cut(s)	13, 239, 666, 926, 1240, 1316
RseI	CAYNNNNRTG	3 cut(s)	256, 468, 1449
SapI	GCTCTTC	1 cut(s)	1668
SaqAI	TTAA	7 cut(s)	39, 333, 362, 539, 594, 677, 1071
SatI	GCNGC	3 cut(s)	266, 426, 864
Sau3AI	GATC	4 cut(s)	157, 208, 355, 1573
Sau96I	GGNCC	3 cut(s)	912, 1259, 1292
ScaI	AGTACT	1 cut(s)	927
SchI	GAGTC	1 cut(s)	541
ScrFI	CCNGG	1 cut(s)	832
SduI	GDGCHC	2 cut(s)	1358, 1680
SfcI	CTRYAG	2 cut(s)	266, 351
SfoI	GGCGCC	1 cut(s)	1209
SinI	GGWCC	1 cut(s)	1259
SmiMI	CAYNNNNRTG	3 cut(s)	256, 468, 1449
SmlI	CTYRAG	4 cut(s)	593, 776, 787, 1163
SmoI	CTYRAG	4 cut(s)	593, 776, 787, 1163
SpeI	ACTAGT	2 cut(s)	979, 1528
SsiI	CCGC	1 cut(s)	1635
SspDI	GGCGCC	1 cut(s)	1207
SspI	AATATT	3 cut(s)	703, 825, 1597
SspMI	CTAG	5 cut(s)	482, 575, 980, 1455, 1529
StyD4I	CCNGG	1 cut(s)	830
StyI	CCWWGG	2 cut(s)	397, 1254
TaaI	ACNGT	7 cut(s)	77, 145, 438, 665, 851, 937, 1657
TaiI	ACGT	4 cut(s)	331, 960, 1140, 1245
TaqI	TCGA	5 cut(s)	211, 629, 758, 801, 942
TatI	WGTACW	3 cut(s)	238, 665, 925
TfiI	GAWTC	6 cut(s)	392, 473, 555, 1018, 1031, 1441
Tru1I	TTAA	7 cut(s)	39, 333, 362, 539, 594, 677, 1071
Tru9I	TTAA	7 cut(s)	39, 333, 362, 539, 594, 677, 1071
TscAI	CASTG	3 cut(s)	738, 865, 1129
TseFI	GTSAC	1 cut(s)	1126
TseI	GCWGC	3 cut(s)	265, 425, 863
Tsp45I	GTSAC	1 cut(s)	1126
TspGWI	ACGGA	2 cut(s)	936, 1333
TspRI	CASTG	3 cut(s)	738, 865, 1129
Vha464I	CTTAAG	1 cut(s)	593
VpaK11BI	GGWCC	1 cut(s)	1259
XagI	CCTNNNNNAGG	1 cut(s)	518
XapI	RAATTY	2 cut(s)	508, 524
XbaI	TCTAGA	1 cut(s)	481
XcmI	CCANNNNNNNNNTGG	1 cut(s)	838
XmnI	GAANNNNTTC	1 cut(s)	477
XspI	CTAG	5 cut(s)	482, 575, 980, 1455, 1529
ZrmI	AGTACT	1 cut(s)	927
Zsp2I	ATGCAT	1 cut(s)	1105

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.