Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001708

Physical Location & Seq

Genomic Coordinates Reverse (-)

77192066 .. 77201228

Gene Structure 9163 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00055620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGACACTGCTTGGGTGGCAATGGTCCCTTCTCCAAATTCTGAAAAGGAGCCTTTTTTTCCCTGAATCCGTAAATTGGTTATTGGATAATCAACTCCAAGATGGCTCATGGGGTCCTCCTAATTTGCATCCATTCTTAACAAAAGATGCTCTCTCATCCACCTTGGCATGTATCCTTGCACTAAAGCAATGGAGTGTCGGTGAAGAACAAATTAACAAGGGGCTGCATTTTATCGAGTCAAACTTAGCTTCAGCTACTGATGAAGAGCAGCCATCGCCTGTTGGGTTTGATATAATATTTCCTGCTATGATTGAATCTGCAATGAGTTCGAATATGAATCTTTCCCAGGAGGCTATGGAAGCAACTCAGAGGGGGTGGAAAGCCTATATAGCGTATATTTCGGAAGGAATTGGAAAGTCACAGGATTGGAAGATGGTCATGAAGTACCAAAGGAAGAACGGGTCTTTGTTTAATTCGCCATCAACTACTGCTTGTGCTTTTATTCACAGTAAGAGTGCTGGTTGTCTTGATTACCTATGCGCACTCATAGAAAAGTTTGGGAATGCAGTTCCAACAGTTTATCCTCTGGATCACTATGCTCGTCTTTCTATGGTTTCAACTCTTGATAGTTTGGGTATTGATCGACACTTCAGGGAGGAAATTAGGAGTGTACTGGATGAAACATACAGATGCTGGCTGCAGGGTGATGAAGATATATTTTCAGATGCTGGCACCTGTGCTATGGCATTTCAACTCTTACGTGTTAATGGATATGATGTCTCTGCAGATCGGTTAAATCAATTTTCAGAAGACCATTTCTTTGATTCCCTTGGAGGATATCTAAGGGACGCTGATGCTGCATTAGAACTGTTTAGGGCATCGGAAGTCATCATACATCCAGATGAATCAGTGGATGATGCTCTTAAGTTTCCTTCCTATGCAACATTGGGTCGGTTGTCGAGCAGGAGAGCAATGATATCTTACTACACCAACAGTACAAGGATTTTAAAATCTTCTTATCGTTGTTTGAATATTGGGAATGAAGACTTCCTAAAAATGGCAGTGGAGGACTTCAATATGTGCCAATCGATACATCGGGAAGAACTCAAGCATCTCTCAAGGTGGGTTATCGAGAGCAGATTGGACAAGCTAATATTTGCCAGGCAGAAGCTGGCTTACTGTTATTTCACTGCTGCTGGAACCCTTTTCCCTCCTGAGCTATTAGATGCTCGCATATCATGGGCCAAAAACGGAGTACTTACAACTGTGGTCGATGATTTCTTTGACGTTGGAGCAATTAAGAGCTTAGTTAGTGAGATTGGCATCAATGCATTCGCAAGGCAAGAGCGCAGTGTGACAAATCACGTCATTGAGATTTGGTTGGATTTGCTCAAGGCTATGCTGAAGGAAGCTAAGTGGTTGATAAACAAGTCGGCGCCAACGATGGAGGAATACATGGAAAATGCGTACGTCTCATTTGCCTTGGGACCTAATGTCCTTTCAAATCTCTATTTGGTAGGGCCTAAGCTCTCAGAGGATGCTGTACGGAGTGCAGAATACTACCATCTGTATAGACTAATGAGCACTTTTGGGCGTCTTCTCAATGATATGCAAAGCTATAAGAGGGAAGCTGTGGAAGGGAAGCTAAATGCTGTAACATTGGCCATGATTCATGGCAATGCTAGCGTTAGCGAAGAAGAGGCCATCAATGAGATGAAGACCATTATCACCAGTAAGAGGAGAGAACTGCAAAGACTAGTTTTGCAGGACAAGGATAGTGTAGTTCCAAGAGCTTGCAAGGATCTGTTTTGGAACATGGGCAATATTTTGCATCTATTTTATGAAAGGCACGATGGATACACCGCGCATGACATGATGAAAACTGTAAATGAAGTAACCGAAGAGCCCATCATTCTCAACGAATTGCAAAGCAGAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009899 GO:0009987 GO:0010033 GO:0010333 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

646

Amino Acids

73.5

Weight (kDa)

5.41

Isoelectric Point (pI)

54.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	142 - 311	2e-35	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	380 - 432	1.9e-14	Terpene synthase family, metal binding domain
Terpene_synth_C	PF03936	435 - 581	3.8e-33	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	438 - 581	1e-29	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001708)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79460
fragaria_vesca	FvH4_3g14116 FvH4_3g14130 FvH4_3g14131 FvH4_3g16270
malus_domestica	MD03G1187200.v1.1 MD10G1215700.v1.1 MD10G1215900.v1.1 MD10G1216200.v1.1
prunus_persica	Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128600_v2.0.a1 Prupe.4G128700_v2.0.a1
pyrus_communis	pycom03g13990 pycom10g18220
rosa_chinensis	RchiOBHm_Chr5g0023441 RchiOBHm_Chr5g0023471 RchiOBHm_Chr5g0023641
rosa_laevigata	RLG00000032721
rosa_multiflora	Rmu_co8406553.1_g000001 Rmu_sc0004593.1_g000004 Rmu_sc0005664.1_g000001 Rmu_sc0005664.1_g000005
rosa_roxburghii	Rroxscaffold_1G00055600 Rroxscaffold_1G00055620 Rroxscaffold_1G00055910
rosa_rugosa	Rorug05G0079200 Rorug05G0079300
rosa_samantha	Rh5AG166100 Rh5AG166200 Rh5AG166300 Rh5AG167600 Rh5AG168000 Rh5BG165300 Rh5BG165500 Rh5CG180300 Rh5CG180400 Rh5CG181400 Rh5DG166800 Rh5DG166900 Rh5DG167800
rosa_wichuraiana	Rw0G019600 Rw5G014950 Rw5G014970 Rw5G015110 Rw5G015120 Rw5G015210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	541
AccB1I	GGYRCC	2 cut(s)	731, 1435
AccII	CGCG	1 cut(s)	1865
AciI	CCGC	1 cut(s)	1863
AclWI	GGATC	2 cut(s)	597, 1809
AcoI	YGGCCR	1 cut(s)	1662
AcsI	RAATTY	1 cut(s)	36
AcuI	CTGAAG	3 cut(s)	234, 634, 1424
AcyI	GRCGYC	2 cut(s)	1436, 1594
AfaI	GTAC	6 cut(s)	446, 672, 997, 1257, 1469, 1545
AfiI	CCNNNNNNNGG	3 cut(s)	75, 1057, 1737
AflII	CTTAAG	1 cut(s)	923
AflIII	ACRYGT	1 cut(s)	760
AgsI	TTSAA	6 cut(s)	314, 618, 752, 1030, 1075, 1503
AhdI	GACNNNNNGTC	1 cut(s)	1493
AhlI	ACTAGT	1 cut(s)	1756
AjiI	CACGTC	1 cut(s)	1366
AjnI	CCWGG	2 cut(s)	345, 1160
Alw21I	GWGCWC	1 cut(s)	1586
Alw26I	GTCTC	2 cut(s)	784, 1477
AlwI	GGATC	2 cut(s)	597, 1809
AlwNI	CAGNNNCTG	4 cut(s)	257, 693, 728, 1171
AoxI	GGCC	4 cut(s)	1242, 1520, 1662, 1701
ApeKI	GCWGC	5 cut(s)	223, 268, 697, 857, 1193
ApoI	RAATTY	1 cut(s)	36
ArsI	GACNNNNNNTTYG	2 cut(s)	803, 835
AspLEI	GCGC	4 cut(s)	542, 1350, 1438, 1867
AspS9I	GGNCC	5 cut(s)	24, 113, 1242, 1487, 1520
AsuHPI	GGTGA	3 cut(s)	212, 716, 1720
AsuII	TTCGAA	1 cut(s)	329
AsuNHI	GCTAGC	1 cut(s)	1682
AvaII	GGWCC	3 cut(s)	24, 113, 1487
BalI	TGGCCA	1 cut(s)	1664
BanI	GGYRCC	2 cut(s)	731, 1435
BanII	GRGCYC	1 cut(s)	1908
BarI	GAAGNNNNNNTAC	4 cut(s)	876, 908, 1160, 1192
BbsI	GAAGAC	4 cut(s)	816, 1050, 1589, 1724
Bbv12I	GWGCWC	1 cut(s)	1586
BbvI	GCAGC	5 cut(s)	210, 280, 684, 844, 1180
BccI	CCATC	9 cut(s)	95, 280, 427, 487, 1438, 1572, 1712, 1847, 1916
BcgI	CGANNNNNNTGC	2 cut(s)	309, 343
BciT130I	CCWGG	2 cut(s)	347, 1162
BciVI	GTATCC	2 cut(s)	182, 1850
BcoDI	GTCTC	2 cut(s)	784, 1477
BcuI	ACTAGT	1 cut(s)	1756
BfaI	CTAG	2 cut(s)	1683, 1757
BfmI	CTRYAG	2 cut(s)	698, 783
BfoI	RGCGCY	1 cut(s)	1439
BfrI	CTTAAG	1 cut(s)	923
BfuI	GTATCC	2 cut(s)	182, 1850
BisI	GCNGC	5 cut(s)	224, 269, 698, 858, 1194
BlsI	GCNGC	5 cut(s)	225, 270, 699, 859, 1195
BmcAI	AGTACT	1 cut(s)	1257
Bme1390I	CCNGG	2 cut(s)	347, 1162
Bme18I	GGWCC	3 cut(s)	24, 113, 1487
BmeRI	GACNNNNNGTC	1 cut(s)	1493
BmgBI	CACGTC	1 cut(s)	1366
BmgT120I	GGNCC	5 cut(s)	24, 113, 1242, 1487, 1520
BmiI	GGNNCC	7 cut(s)	26, 50, 114, 733, 1201, 1437, 1488
BmrFI	CCNGG	2 cut(s)	347, 1162
BmtI	GCTAGC	1 cut(s)	1686
BpiI	GAAGAC	4 cut(s)	816, 1050, 1589, 1724
Bpu10I	CCTNAGC	2 cut(s)	1215, 1524
Bpu14I	TTCGAA	1 cut(s)	329
BpuEI	CTTGAG	3 cut(s)	1091, 1102, 1376
Bsa29I	ATCGAT	1 cut(s)	1088
BsaAI	YACGTR	1 cut(s)	761
BsaBI	GATNNNNATC	1 cut(s)	1322
BsaHI	GRCGYC	2 cut(s)	1436, 1594
BsaJI	CCNNGG	4 cut(s)	162, 345, 829, 1482
BsaXI	ACNNNNNCTCC	2 cut(s)	184, 214
Bsc4I	CCNNNNNNNGG	3 cut(s)	75, 1057, 1737
Bse1I	ACTGG	2 cut(s)	678, 1731
Bse3DI	GCAATG	5 cut(s)	26, 194, 327, 978, 1684
Bse8I	GATNNNNATC	1 cut(s)	1322
BseBI	CCWGG	2 cut(s)	347, 1162
BseCI	ATCGAT	1 cut(s)	1088
BseDI	CCNNGG	4 cut(s)	162, 345, 829, 1482
BseGI	GGATG	6 cut(s)	127, 155, 682, 895, 919, 1543
BseJI	GATNNNNATC	1 cut(s)	1322
BseLI	CCNNNNNNNGG	3 cut(s)	75, 1057, 1737
BseMI	GCAATG	5 cut(s)	26, 194, 327, 978, 1684
BseMII	CTCAG	3 cut(s)	380, 1206, 1545
BseNI	ACTGG	2 cut(s)	678, 1731
BseRI	GAGGAG	1 cut(s)	1753
BseXI	GCAGC	5 cut(s)	210, 280, 684, 844, 1180
BsgI	GTGCAG	1 cut(s)	1572
Bsh1236I	CGCG	1 cut(s)	1865
BshFI	GGCC	4 cut(s)	1244, 1522, 1664, 1703
BshNI	GGYRCC	2 cut(s)	731, 1435
BshVI	ATCGAT	1 cut(s)	1088
BsiHKAI	GWGCWC	1 cut(s)	1586
BsiWI	CGTACG	1 cut(s)	1467
BslFI	GGGAC	3 cut(s)	10, 860, 1500
BslI	CCNNNNNNNGG	3 cut(s)	75, 1057, 1737
BsmAI	GTCTC	2 cut(s)	784, 1477
BsmBI	CGTCTC	1 cut(s)	1477
BsmFI	GGGAC	3 cut(s)	10, 860, 1500
BsmI	GAATGC	2 cut(s)	568, 1331
BsnI	GGCC	4 cut(s)	1244, 1522, 1664, 1703
Bsp119I	TTCGAA	1 cut(s)	329
Bsp1286I	GDGCHC	2 cut(s)	1586, 1908
Bsp143I	GATC	4 cut(s)	589, 640, 787, 1801
BspACI	CCGC	1 cut(s)	1863
BspANI	GGCC	4 cut(s)	1244, 1522, 1664, 1703
BspCNI	CTCAG	3 cut(s)	379, 1207, 1544
BspDI	ATCGAT	1 cut(s)	1088
BspFNI	CGCG	1 cut(s)	1865
BspHI	TCATGA	1 cut(s)	438
BspLI	GGNNCC	7 cut(s)	26, 50, 114, 733, 1201, 1437, 1488
BspMAI	CTGCAG	2 cut(s)	702, 787
BspOI	GCTAGC	1 cut(s)	1686
BspPI	GGATC	2 cut(s)	597, 1809
BspQI	GCTCTTC	2 cut(s)	258, 1896
BspT104I	TTCGAA	1 cut(s)	329
BspT107I	GGYRCC	2 cut(s)	731, 1435
BspTI	CTTAAG	1 cut(s)	923
BsrDI	GCAATG	5 cut(s)	26, 194, 327, 978, 1684
BsrI	ACTGG	2 cut(s)	678, 1731
BssECI	CCNNGG	4 cut(s)	162, 345, 829, 1482
BssMI	GATC	4 cut(s)	589, 640, 787, 1801
BssNI	GRCGYC	2 cut(s)	1436, 1594
BssT1I	CCWWGG	3 cut(s)	162, 829, 1482
Bst2UI	CCWGG	2 cut(s)	347, 1162
Bst4CI	ACNGT	7 cut(s)	509, 577, 870, 995, 1181, 1267, 1885
Bst6I	CTCTTC	3 cut(s)	258, 1692, 1896
BstACI	GRCGYC	2 cut(s)	1436, 1594
BstAFI	CTTAAG	1 cut(s)	923
BstBAI	YACGTR	1 cut(s)	761
BstBI	TTCGAA	1 cut(s)	329
BstC8I	GCNNGC	6 cut(s)	695, 730, 1173, 1231, 1684, 1795
BstDEI	CTNAG	8 cut(s)	244, 366, 842, 1215, 1306, 1413, 1524, 1531
BstF5I	GGATG	6 cut(s)	127, 155, 682, 895, 919, 1543
BstFNI	CGCG	1 cut(s)	1865
BstH2I	RGCGCY	1 cut(s)	1439
BstHHI	GCGC	4 cut(s)	542, 1350, 1438, 1867
BstKTI	GATC	4 cut(s)	592, 643, 790, 1804
BstMAI	GTCTC	2 cut(s)	784, 1477
BstMBI	GATC	4 cut(s)	589, 640, 787, 1801
BstMWI	GCNNNNNNNGC	6 cut(s)	16, 274, 359, 389, 857, 1683
BstNI	CCWGG	2 cut(s)	347, 1162
BstNSI	RCATGY	1 cut(s)	171
BstSCI	CCNGG	2 cut(s)	345, 1160
BstSFI	CTRYAG	2 cut(s)	698, 783
BstUI	CGCG	1 cut(s)	1865
BstV1I	GCAGC	5 cut(s)	210, 280, 684, 844, 1180
BstV2I	GAAGAC	4 cut(s)	816, 1050, 1589, 1724
BstX2I	RGATCY	1 cut(s)	1801
BstYI	RGATCY	1 cut(s)	1801
Bsu15I	ATCGAT	1 cut(s)	1088
BsuI	GTATCC	2 cut(s)	182, 1850
BsuRI	GGCC	4 cut(s)	1244, 1522, 1664, 1703
BsuTUI	ATCGAT	1 cut(s)	1088
BtgZI	GCGATG	1 cut(s)	258
BtrI	CACGTC	1 cut(s)	1366
BtsCI	GGATG	6 cut(s)	127, 155, 682, 895, 919, 1543
BtsI	GCAGTG	4 cut(s)	5, 1068, 1188, 1357
BtsIMutI	CAGTG	5 cut(s)	5, 915, 1068, 1188, 1357
Cac8I	GCNNGC	6 cut(s)	695, 730, 1173, 1231, 1684, 1795
CaiI	CAGNNNCTG	4 cut(s)	257, 693, 728, 1171
CciI	TCATGA	1 cut(s)	438
CfoI	GCGC	4 cut(s)	542, 1350, 1438, 1867
Cfr13I	GGNCC	5 cut(s)	24, 113, 1242, 1487, 1520
ClaI	ATCGAT	1 cut(s)	1088
CseI	GACGC	2 cut(s)	857, 1583
Csp6I	GTAC	6 cut(s)	445, 671, 996, 1256, 1468, 1544
CviQI	GTAC	6 cut(s)	445, 671, 996, 1256, 1468, 1544
DdeI	CTNAG	8 cut(s)	244, 366, 842, 1215, 1306, 1413, 1524, 1531
DinI	GGCGCC	1 cut(s)	1437
DpnI	GATC	4 cut(s)	591, 642, 789, 1803
DpnII	GATC	4 cut(s)	589, 640, 787, 1801
DraI	TTTAAA	1 cut(s)	1008
DriI	GACNNNNNGTC	1 cut(s)	1493
EaeI	YGGCCR	1 cut(s)	1662
Eam1104I	CTCTTC	3 cut(s)	258, 1692, 1896
Eam1105I	GACNNNNNGTC	1 cut(s)	1493
EarI	CTCTTC	3 cut(s)	258, 1692, 1896
Eco130I	CCWWGG	3 cut(s)	162, 829, 1482
Eco24I	GRGCYC	1 cut(s)	1908
Eco32I	GATATC	2 cut(s)	839, 978
Eco47I	GGWCC	3 cut(s)	24, 113, 1487
Eco57I	CTGAAG	3 cut(s)	234, 634, 1424
EcoO109I	RGGNCCY	3 cut(s)	113, 1487, 1520
EcoRII	CCWGG	2 cut(s)	345, 1160
EcoRV	GATATC	2 cut(s)	839, 978
EcoT14I	CCWWGG	3 cut(s)	162, 829, 1482
EcoT22I	ATGCAT	1 cut(s)	1333
EcoT38I	GRGCYC	1 cut(s)	1908
EgeI	GGCGCC	1 cut(s)	1437
EheI	GGCGCC	1 cut(s)	1437
ErhI	CCWWGG	3 cut(s)	162, 829, 1482
Esp3I	CGTCTC	1 cut(s)	1477
FaqI	GGGAC	3 cut(s)	10, 860, 1500
Fnu4HI	GCNGC	5 cut(s)	224, 269, 698, 858, 1194
FokI	GGATG	6 cut(s)	114, 142, 689, 882, 926, 1550
FriOI	GRGCYC	1 cut(s)	1908
Fsp4HI	GCNGC	5 cut(s)	224, 269, 698, 858, 1194
FspAI	RTGCGCAY	1 cut(s)	541
FspBI	CTAG	2 cut(s)	1683, 1757
FspI	TGCGCA	1 cut(s)	541
GlaI	GCGC	4 cut(s)	541, 1349, 1437, 1866
GluI	GCNGC	5 cut(s)	224, 269, 698, 858, 1194
HaeII	RGCGCY	1 cut(s)	1439
HaeIII	GGCC	4 cut(s)	1244, 1522, 1664, 1703
HgaI	GACGC	2 cut(s)	857, 1583
HhaI	GCGC	4 cut(s)	542, 1350, 1438, 1867
Hin1I	GRCGYC	2 cut(s)	1436, 1594
Hin6I	GCGC	4 cut(s)	540, 1348, 1436, 1865
HinP1I	GCGC	4 cut(s)	540, 1348, 1436, 1865
HinfI	GANTC	7 cut(s)	65, 236, 314, 337, 824, 905, 1669
HphI	GGTGA	3 cut(s)	212, 716, 1720
Hpy166II	GTNNAC	1 cut(s)	671
Hpy188I	TCNGA	7 cut(s)	42, 369, 403, 724, 808, 883, 1534
Hpy188III	TCNNGA	8 cut(s)	439, 527, 587, 623, 899, 1097, 1132, 1214
Hpy8I	GTNNAC	1 cut(s)	671
HpyAV	CCTTC	5 cut(s)	38, 398, 942, 1399, 1631
HpyCH4III	ACNGT	7 cut(s)	509, 577, 870, 995, 1181, 1267, 1885
HpyCH4IV	ACGT	4 cut(s)	760, 1287, 1365, 1470
HpyF10VI	GCNNNNNNNGC	6 cut(s)	16, 274, 359, 389, 857, 1683
HpyF3I	CTNAG	8 cut(s)	244, 366, 842, 1215, 1306, 1413, 1524, 1531
HpySE526I	ACGT	4 cut(s)	760, 1287, 1365, 1470
Hsp92I	GRCGYC	2 cut(s)	1436, 1594
HspAI	GCGC	4 cut(s)	540, 1348, 1436, 1865
KasI	GGCGCC	1 cut(s)	1435
Kzo9I	GATC	4 cut(s)	589, 640, 787, 1801
LguI	GCTCTTC	2 cut(s)	258, 1896
LmnI	GCTCC	2 cut(s)	48, 1292
Lsp1109I	GCAGC	5 cut(s)	210, 280, 684, 844, 1180
MaeI	CTAG	2 cut(s)	1683, 1757
MaeII	ACGT	4 cut(s)	760, 1287, 1365, 1470
MaeIII	GTNAC	4 cut(s)	417, 1354, 1654, 1894
MalI	GATC	4 cut(s)	591, 642, 789, 1803
MboI	GATC	4 cut(s)	589, 640, 787, 1801
MflI	RGATCY	1 cut(s)	1801
MhlI	GDGCHC	2 cut(s)	1586, 1908
MlsI	TGGCCA	1 cut(s)	1664
MluNI	TGGCCA	1 cut(s)	1664
Mly113I	GGCGCC	1 cut(s)	1436
MlyI	GAGTC	1 cut(s)	245
MmeI	TCCRAC	3 cut(s)	596, 1270, 1362
Mox20I	TGGCCA	1 cut(s)	1664
Mph1103I	ATGCAT	1 cut(s)	1333
MscI	TGGCCA	1 cut(s)	1664
MseI	TTAA	8 cut(s)	137, 213, 471, 765, 794, 924, 1007, 1299
MslI	CAYNNNNRTG	3 cut(s)	688, 900, 1677
Msp20I	TGGCCA	1 cut(s)	1664
MspCI	CTTAAG	1 cut(s)	923
MspR9I	CCNGG	2 cut(s)	347, 1162
Mva1269I	GAATGC	2 cut(s)	568, 1331
MvaI	CCWGG	2 cut(s)	347, 1162
MvnI	CGCG	1 cut(s)	1865
MwoI	GCNNNNNNNGC	6 cut(s)	16, 274, 359, 389, 857, 1683
NarI	GGCGCC	1 cut(s)	1436
NdeII	GATC	4 cut(s)	589, 640, 787, 1801
NheI	GCTAGC	1 cut(s)	1682
NlaIV	GGNNCC	7 cut(s)	26, 50, 114, 733, 1201, 1437, 1488
NmuCI	GTSAC	2 cut(s)	417, 1354
NsbI	TGCGCA	1 cut(s)	541
NsiI	ATGCAT	1 cut(s)	1333
NspI	RCATGY	1 cut(s)	171
NspV	TTCGAA	1 cut(s)	329
PagI	TCATGA	1 cut(s)	438
PciSI	GCTCTTC	2 cut(s)	258, 1896
PcsI	WCGNNNNNNNCGW	1 cut(s)	1439
PctI	GAATGC	2 cut(s)	568, 1331
PfeI	GAWTC	6 cut(s)	65, 314, 337, 824, 905, 1669
Pfl23II	CGTACG	1 cut(s)	1467
PkrI	GCNGC	5 cut(s)	225, 270, 699, 859, 1195
PleI	GAGTC	1 cut(s)	244
PluTI	GGCGCC	1 cut(s)	1439
PpsI	GAGTC	1 cut(s)	244
Ppu21I	YACGTR	1 cut(s)	761
PpuMI	RGGWCCY	2 cut(s)	113, 1487
Psp5II	RGGWCCY	2 cut(s)	113, 1487
Psp6I	CCWGG	2 cut(s)	345, 1160
PspGI	CCWGG	2 cut(s)	345, 1160
PspLI	CGTACG	1 cut(s)	1467
PspN4I	GGNNCC	7 cut(s)	26, 50, 114, 733, 1201, 1437, 1488
PspPI	GGNCC	5 cut(s)	24, 113, 1242, 1487, 1520
PspPPI	RGGWCCY	2 cut(s)	113, 1487
PstI	CTGCAG	2 cut(s)	702, 787
PstNI	CAGNNNCTG	4 cut(s)	257, 693, 728, 1171
PsuI	RGATCY	1 cut(s)	1801
RsaI	GTAC	6 cut(s)	446, 672, 997, 1257, 1469, 1545
RsaNI	GTAC	6 cut(s)	445, 671, 996, 1256, 1468, 1544
RseI	CAYNNNNRTG	3 cut(s)	688, 900, 1677
SapI	GCTCTTC	2 cut(s)	258, 1896
SaqAI	TTAA	8 cut(s)	137, 213, 471, 765, 794, 924, 1007, 1299
SatI	GCNGC	5 cut(s)	224, 269, 698, 858, 1194
Sau3AI	GATC	4 cut(s)	589, 640, 787, 1801
Sau96I	GGNCC	5 cut(s)	24, 113, 1242, 1487, 1520
ScaI	AGTACT	1 cut(s)	1257
SchI	GAGTC	1 cut(s)	245
ScrFI	CCNGG	2 cut(s)	347, 1162
SduI	GDGCHC	2 cut(s)	1586, 1908
SfcI	CTRYAG	2 cut(s)	698, 783
SfoI	GGCGCC	1 cut(s)	1437
SfuI	TTCGAA	1 cut(s)	329
SinI	GGWCC	3 cut(s)	24, 113, 1487
SmiMI	CAYNNNNRTG	3 cut(s)	688, 900, 1677
SmlI	CTYRAG	4 cut(s)	923, 1106, 1117, 1391
SmoI	CTYRAG	4 cut(s)	923, 1106, 1117, 1391
SpeI	ACTAGT	1 cut(s)	1756
SsiI	CCGC	1 cut(s)	1863
SspDI	GGCGCC	1 cut(s)	1435
SspI	AATATT	4 cut(s)	297, 1033, 1155, 1825
SspMI	CTAG	2 cut(s)	1683, 1757
StyD4I	CCNGG	2 cut(s)	345, 1160
StyI	CCWWGG	3 cut(s)	162, 829, 1482
TaaI	ACNGT	7 cut(s)	509, 577, 870, 995, 1181, 1267, 1885
TaiI	ACGT	4 cut(s)	763, 1290, 1368, 1473
TaqI	TCGA	7 cut(s)	234, 329, 643, 959, 1088, 1131, 1272
TatI	WGTACW	3 cut(s)	670, 995, 1255
TfiI	GAWTC	6 cut(s)	65, 314, 337, 824, 905, 1669
Tru1I	TTAA	8 cut(s)	137, 213, 471, 765, 794, 924, 1007, 1299
Tru9I	TTAA	8 cut(s)	137, 213, 471, 765, 794, 924, 1007, 1299
TscAI	CASTG	5 cut(s)	12, 915, 1068, 1195, 1357
TseFI	GTSAC	2 cut(s)	417, 1354
TseI	GCWGC	5 cut(s)	223, 268, 697, 857, 1193
Tsp45I	GTSAC	2 cut(s)	417, 1354
TspGWI	ACGGA	3 cut(s)	58, 1266, 1561
TspRI	CASTG	5 cut(s)	12, 915, 1068, 1195, 1357
Vha464I	CTTAAG	1 cut(s)	923
VpaK11BI	GGWCC	3 cut(s)	24, 113, 1487
XapI	RAATTY	1 cut(s)	36
XceI	RCATGY	1 cut(s)	171
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1168
XspI	CTAG	2 cut(s)	1683, 1757
ZrmI	AGTACT	1 cut(s)	1257
Zsp2I	ATGCAT	1 cut(s)	1333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.