Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001708

Physical Location & Seq

Genomic Coordinates Forward (+)

17957771 .. 17969521

Gene Structure 11751 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G014950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2340 bp

ATGTCCTTCTCCAACCTCAACATTTTGAGGTGTTGCACATCTTCCTCATCAGGTCTCTCTCTCTTGCTCTCTCTGGCTTTTTGTCTGTCCTTCCTAACTTTTTTTCCTCCATACTGTAAAAGCACTGGTTTTTTGAATTTTGAGGCAACTAAACAAAGAATAAAGAAGATGTTCAACAAGGTTGATCTCTCTGTTTCCTCATATGACACTGCTTGGGTGGCAATGGTCCCTTCTCCAAATTCTGAAAAGGAGCCTTTTTTCCCTGAATGCGTAAACTGGTTATTGGATAATCAACTTCATGATGGCTCATGGGGTCCTCCTAATTTGCATCCATTGTTACCAAAAGATGCTCTCTCATCCACCTTGGCATGTATCCTTGCACTAAAGCAATGGAGTGTCGGTGAAGAACAAATTAACAAGGGGCTGCATTTTATCGAGTCAAACTTAGCTTCAGCTACTGATGAAGAGCAGCCATCGCCTGTTGGGTTTGATATAATATTTCCTGCTATGATTGAATCTGCAATGAGTTTGAATATCAATCTTTCCCAGGGTGGATCAACCTTAAAGGCTTTATTTCACAGGAGAGACTTGAAGCTTAAAAGAGGCTATGGAAACAACTTAGAGGGGTGGAAAGCCTATATAGCATATATTTCAGAAGGAATTGGAAAGTCACAGGATTGGAAGATGGTCATGAAGTACCAAAGGAAGAACGGGTCTTTGTTTAATTCACCATCAACTACTGCTTCTGCTTTTACTCACAGCAAGAGTGCTGGTTGTCTTGATTACCTATGCGCACTCATAGAGAAGTTTGGGAATGCAGTTCCAACAGTTTATCCTCTGGATCACTATGCTCGTCTTTCTATGGTTTCAACTCTTGATAGTTTGGGTATTGATCGACACTTCAGGGAGGAAATTAGGAGTGTACTGGATGAAACATACAGATGCTGGCTGCAGGGGGATGAAGATATATTTTCAGATGCTGGCACCTGTGCTATGGTATTTCGACTCTTACGTGTTAATGGATATGATGTCTCTGCAAATCGGTTAAATCAATTTTCAGAAGACCATTTCTTTGATTCCCTTGGAGGATATCTAAGGGACACTGATGCTGCATTAGAACTGTTTAGGGCATCGGAAGTCATCATACATCCAGATGAATCAGTTCTAGAGAAACAAAATTACTGGACAAGGAATTTCCTAGAACAGGAATTTTCTAATAATTTAACTCAGCCTCACAGAATCAATAAGCATATTGGCCTAGAGGTAGCTTTCTATTTTTCCTTCCTATGCTACTTTGGTCGGTTATCGAGCAGGAGGGCAATGATATCTTACAACACCAACAGTACAAGGATTTTAAAATCTTCTTATCGTTGTTTGAATATTGGGAATGAAGACTTCCTAAAACTGGCAGTGGAGGACTTCAATACGTGCCAATCGATACATCGGGAAGAACTCGAGCATCTTTCAAGCTGGCTTACTGTTATTTCACTGCTACTGGAACCCTTTTCCGTCCTGAACTATCAGATGCTCGCATATCATGGGCCAAAAACGGTACTTACAACTGTGGTCGATGATTTATTTGACGTTGGAGGTTCCGAAGAGGAACTAGTAAACCTTATACAATTGGTTGAGAAGTGGGATGTGAATCCAAGAACCGATTCTTGCTCCGAGAATGTTGAAATCGTTTTTTCAGCAATTAAGAGCTTAGTTAGTGAGATTGGCATCAATGCATTCGCAAGGCAAGAGCGCAGTGTGACAAATCACGTCATTGAGATTTGGTTGGATTTGCTCAAGGCTATGCTGAAGGAAGCTAAGTGGTTGATAAACAAGTCAGCGCCAACAATGGAGGAATACGTGGAAAATGCGTACGTCTCATTTGCCTTGGGACCAACTGTCCTTTCAAATCTCTATTTGGTAGGGCCTAAGCTCTCAGTGGATGCTGTACGGAGTTCGGAATACTACCATCTGTATAGACTAATGAGCACTTTTGGGCGTCTTCTCAATGATATGCAAAGCTATAAGAGGGAAGCTGCGGAAGGGAAGCTAAATGCTGTAACATTGGCCATGATTCATGGCAATGGTAGTGTTAGCGAAGAAGAGGCCATCAATGAGATGAAGAGCATTATCACCAGTAAGAGGAGAGAACTGCAAAGACTAGTTTTGCAGGACAAGGATAGTGTAGTTCCAAGAGCTTGCAAGGATCTGTTTTGGAACATGGGCAATATTTTGCATCTATTTTATGAAAGGCACGATGGATACACTGCGCATGACATGATGAAAATTGTAAATGAAGTAACCGAAGAACCCATCATTCTCAACGAATTGCAAAGCAGAAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009899 GO:0009987 GO:0010033 GO:0010333 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

779

Amino Acids

88.51

Weight (kDa)

5.59

Isoelectric Point (pI)

51.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	226 - 418	4.3e-40	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	517 - 714	8.6e-51	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	518 - 714	7.8e-42	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001708)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79460
fragaria_vesca	FvH4_3g14116 FvH4_3g14130 FvH4_3g14131 FvH4_3g16270
malus_domestica	MD03G1187200.v1.1 MD10G1215700.v1.1 MD10G1215900.v1.1 MD10G1216200.v1.1
prunus_persica	Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128600_v2.0.a1 Prupe.4G128700_v2.0.a1
pyrus_communis	pycom03g13990 pycom10g18220
rosa_chinensis	RchiOBHm_Chr5g0023441 RchiOBHm_Chr5g0023471 RchiOBHm_Chr5g0023641
rosa_laevigata	RLG00000032721
rosa_multiflora	Rmu_co8406553.1_g000001 Rmu_sc0004593.1_g000004 Rmu_sc0005664.1_g000001 Rmu_sc0005664.1_g000005
rosa_roxburghii	Rroxscaffold_1G00055600 Rroxscaffold_1G00055620 Rroxscaffold_1G00055910
rosa_rugosa	Rorug05G0079200 Rorug05G0079300
rosa_samantha	Rh5AG166100 Rh5AG166200 Rh5AG166300 Rh5AG167600 Rh5AG168000 Rh5BG165300 Rh5BG165500 Rh5CG180300 Rh5CG180400 Rh5CG181400 Rh5DG166800 Rh5DG166900 Rh5DG167800
rosa_wichuraiana	Rw0G019600 Rw5G014950 Rw5G014970 Rw5G015110 Rw5G015120 Rw5G015210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	793, 2265
AccB1I	GGYRCC	1 cut(s)	983
AciI	CCGC	1 cut(s)	2033
AclWI	GGATC	3 cut(s)	562, 849, 2208
AcoI	YGGCCR	1 cut(s)	2061
AcsI	RAATTY	4 cut(s)	136, 238, 1192, 1208
AcuI	CTGAAG	3 cut(s)	435, 886, 1823
AcyI	GRCGYC	1 cut(s)	1993
AfaI	GTAC	6 cut(s)	698, 924, 1345, 1554, 1868, 1944
AfiI	CCNNNNNNNGG	3 cut(s)	1204, 1405, 2136
AflIII	ACRYGT	1 cut(s)	1012
AhdI	GACNNNNNGTC	1 cut(s)	1892
AhlI	ACTAGT	2 cut(s)	1606, 2155
AjiI	CACGTC	1 cut(s)	1765
AjnI	CCWGG	1 cut(s)	546
AjuI	GAANNNNNNNTTGG	4 cut(s)	1642, 1674, 1882, 1914
Alw21I	GWGCWC	1 cut(s)	1985
Alw26I	GTCTC	4 cut(s)	59, 579, 1036, 1876
AlwI	GGATC	3 cut(s)	562, 849, 2208
AlwNI	CAGNNNCTG	3 cut(s)	458, 945, 980
Ama87I	CYCGRG	1 cut(s)	1454
AoxI	GGCC	5 cut(s)	1255, 1541, 1919, 2061, 2100
ApeKI	GCWGC	5 cut(s)	424, 469, 949, 1109, 2030
ApoI	RAATTY	4 cut(s)	136, 238, 1192, 1208
ArsI	GACNNNNNNTTYG	2 cut(s)	1055, 1087
Asp700I	GAANNNNTTC	3 cut(s)	170, 1161, 1657
AspLEI	GCGC	4 cut(s)	794, 1749, 1837, 2266
AspS9I	GGNCC	5 cut(s)	226, 314, 1541, 1886, 1919
AsuHPI	GGTGA	3 cut(s)	413, 720, 2119
AvaI	CYCGRG	1 cut(s)	1454
AvaII	GGWCC	3 cut(s)	226, 314, 1886
BalI	TGGCCA	1 cut(s)	2063
BanI	GGYRCC	1 cut(s)	983
BarI	GAAGNNNNNNTAC	2 cut(s)	1128, 1160
BbsI	GAAGAC	3 cut(s)	1068, 1398, 1988
Bbv12I	GWGCWC	1 cut(s)	1985
BbvI	GCAGC	5 cut(s)	411, 481, 936, 1096, 2017
BccI	CCATC	8 cut(s)	296, 481, 679, 739, 1971, 2111, 2246, 2315
BciT130I	CCWGG	1 cut(s)	548
BciVI	GTATCC	2 cut(s)	383, 2249
BcoDI	GTCTC	4 cut(s)	59, 579, 1036, 1876
BcuI	ACTAGT	2 cut(s)	1606, 2155
BfaI	CTAG	5 cut(s)	1166, 1199, 1259, 1607, 2156
BfmI	CTRYAG	1 cut(s)	950
BfoI	RGCGCY	1 cut(s)	1838
BfuI	GTATCC	2 cut(s)	383, 2249
BisI	GCNGC	5 cut(s)	425, 470, 950, 1110, 2031
BlsI	GCNGC	5 cut(s)	426, 471, 951, 1111, 2032
Bme1390I	CCNGG	1 cut(s)	548
Bme18I	GGWCC	3 cut(s)	226, 314, 1886
BmeRI	GACNNNNNGTC	1 cut(s)	1892
BmeT110I	CYCGRG	1 cut(s)	1454
BmgBI	CACGTC	1 cut(s)	1765
BmgT120I	GGNCC	5 cut(s)	226, 314, 1541, 1886, 1919
BmiI	GGNNCC	7 cut(s)	228, 252, 315, 985, 1500, 1594, 1887
BmrFI	CCNGG	1 cut(s)	548
BpiI	GAAGAC	3 cut(s)	1068, 1398, 1988
Bpu10I	CCTNAGC	1 cut(s)	1923
BpuEI	CTTGAG	1 cut(s)	1775
Bsa29I	ATCGAT	1 cut(s)	1436
BsaAI	YACGTR	3 cut(s)	1013, 1428, 1855
BsaBI	GATNNNNATC	2 cut(s)	1644, 1721
BsaHI	GRCGYC	1 cut(s)	1993
BsaI	GGTCTC	1 cut(s)	59
BsaJI	CCNNGG	5 cut(s)	363, 546, 547, 1081, 1881
BsaXI	ACNNNNNCTCC	2 cut(s)	385, 415
Bsc4I	CCNNNNNNNGG	3 cut(s)	1204, 1405, 2136
Bse1I	ACTGG	7 cut(s)	130, 281, 930, 1187, 1410, 1500, 2130
Bse3DI	GCAATG	5 cut(s)	228, 395, 528, 1326, 2083
Bse8I	GATNNNNATC	2 cut(s)	1644, 1721
BseBI	CCWGG	1 cut(s)	548
BseCI	ATCGAT	1 cut(s)	1436
BseDI	CCNNGG	5 cut(s)	363, 546, 547, 1081, 1881
BseGI	GGATG	7 cut(s)	328, 356, 934, 964, 1147, 1645, 1942
BseJI	GATNNNNATC	2 cut(s)	1644, 1721
BseLI	CCNNNNNNNGG	3 cut(s)	1204, 1405, 2136
BseMI	GCAATG	5 cut(s)	228, 395, 528, 1326, 2083
BseMII	CTCAG	2 cut(s)	1241, 1944
BseNI	ACTGG	7 cut(s)	130, 281, 930, 1187, 1410, 1500, 2130
BseRI	GAGGAG	1 cut(s)	2152
BseXI	GCAGC	5 cut(s)	411, 481, 936, 1096, 2017
BshFI	GGCC	5 cut(s)	1257, 1543, 1921, 2063, 2102
BshNI	GGYRCC	1 cut(s)	983
BshVI	ATCGAT	1 cut(s)	1436
BsiHKAI	GWGCWC	1 cut(s)	1985
BsiHKCI	CYCGRG	1 cut(s)	1454
BsiWI	CGTACG	1 cut(s)	1866
BslFI	GGGAC	3 cut(s)	212, 1112, 1899
BslI	CCNNNNNNNGG	3 cut(s)	1204, 1405, 2136
BsmAI	GTCTC	4 cut(s)	59, 579, 1036, 1876
BsmBI	CGTCTC	1 cut(s)	1876
BsmFI	GGGAC	3 cut(s)	212, 1112, 1899
BsmI	GAATGC	3 cut(s)	272, 820, 1730
BsnI	GGCC	5 cut(s)	1257, 1543, 1921, 2063, 2102
Bso31I	GGTCTC	1 cut(s)	59
BsoBI	CYCGRG	1 cut(s)	1454
Bsp1286I	GDGCHC	1 cut(s)	1985
Bsp143I	GATC	5 cut(s)	184, 554, 841, 892, 2200
BspACI	CCGC	1 cut(s)	2033
BspANI	GGCC	5 cut(s)	1257, 1543, 1921, 2063, 2102
BspCNI	CTCAG	2 cut(s)	1240, 1943
BspDI	ATCGAT	1 cut(s)	1436
BspHI	TCATGA	2 cut(s)	298, 690
BspLI	GGNNCC	7 cut(s)	228, 252, 315, 985, 1500, 1594, 1887
BspMAI	CTGCAG	1 cut(s)	954
BspPI	GGATC	3 cut(s)	562, 849, 2208
BspQI	GCTCTTC	2 cut(s)	459, 2111
BspT107I	GGYRCC	1 cut(s)	983
BspTNI	GGTCTC	1 cut(s)	59
BsrDI	GCAATG	5 cut(s)	228, 395, 528, 1326, 2083
BsrI	ACTGG	7 cut(s)	130, 281, 930, 1187, 1410, 1500, 2130
BssECI	CCNNGG	5 cut(s)	363, 546, 547, 1081, 1881
BssMI	GATC	5 cut(s)	184, 554, 841, 892, 2200
BssNI	GRCGYC	1 cut(s)	1993
BssT1I	CCWWGG	3 cut(s)	363, 1081, 1881
Bst2UI	CCWGG	1 cut(s)	548
Bst4CI	ACNGT	8 cut(s)	116, 829, 1122, 1343, 1480, 1552, 1564, 1894
Bst6I	CTCTTC	4 cut(s)	459, 1593, 2091, 2111
BstACI	GRCGYC	1 cut(s)	1993
BstBAI	YACGTR	3 cut(s)	1013, 1428, 1855
BstC8I	GCNNGC	5 cut(s)	947, 982, 1472, 1530, 2194
BstDEI	CTNAG	8 cut(s)	445, 619, 1094, 1227, 1705, 1812, 1923, 1930
BstENI	CCTNNNNNAGG	1 cut(s)	1202
BstF5I	GGATG	7 cut(s)	328, 356, 934, 964, 1147, 1645, 1942
BstH2I	RGCGCY	1 cut(s)	1838
BstHHI	GCGC	4 cut(s)	794, 1749, 1837, 2266
BstKTI	GATC	5 cut(s)	187, 557, 844, 895, 2203
BstMAI	GTCTC	4 cut(s)	59, 579, 1036, 1876
BstMBI	GATC	5 cut(s)	184, 554, 841, 892, 2200
BstMWI	GCNNNNNNNGC	3 cut(s)	218, 475, 641
BstNI	CCWGG	1 cut(s)	548
BstNSI	RCATGY	1 cut(s)	372
BstSCI	CCNGG	1 cut(s)	546
BstSFI	CTRYAG	1 cut(s)	950
BstV1I	GCAGC	5 cut(s)	411, 481, 936, 1096, 2017
BstV2I	GAAGAC	3 cut(s)	1068, 1398, 1988
BstX2I	RGATCY	1 cut(s)	2200
BstYI	RGATCY	1 cut(s)	2200
Bsu15I	ATCGAT	1 cut(s)	1436
BsuI	GTATCC	2 cut(s)	383, 2249
BsuRI	GGCC	5 cut(s)	1257, 1543, 1921, 2063, 2102
BsuTUI	ATCGAT	1 cut(s)	1436
BtgZI	GCGATG	1 cut(s)	459
BtrI	CACGTC	1 cut(s)	1765
BtsCI	GGATG	7 cut(s)	328, 356, 934, 964, 1147, 1645, 1942
BtsI	GCAGTG	5 cut(s)	207, 1416, 1487, 1756, 2259
BtsIMutI	CAGTG	8 cut(s)	123, 207, 1101, 1416, 1487, 1756, 1938, 2259
Cac8I	GCNNGC	5 cut(s)	947, 982, 1472, 1530, 2194
CaiI	CAGNNNCTG	3 cut(s)	458, 945, 980
CciI	TCATGA	2 cut(s)	298, 690
CfoI	GCGC	4 cut(s)	794, 1749, 1837, 2266
Cfr13I	GGNCC	5 cut(s)	226, 314, 1541, 1886, 1919
ClaI	ATCGAT	1 cut(s)	1436
CseI	GACGC	1 cut(s)	1982
Csp6I	GTAC	6 cut(s)	697, 923, 1344, 1553, 1867, 1943
CviQI	GTAC	6 cut(s)	697, 923, 1344, 1553, 1867, 1943
DdeI	CTNAG	8 cut(s)	445, 619, 1094, 1227, 1705, 1812, 1923, 1930
DpnI	GATC	5 cut(s)	186, 556, 843, 894, 2202
DpnII	GATC	5 cut(s)	184, 554, 841, 892, 2200
DraI	TTTAAA	1 cut(s)	1356
DriI	GACNNNNNGTC	1 cut(s)	1892
EaeI	YGGCCR	1 cut(s)	2061
Eam1104I	CTCTTC	4 cut(s)	459, 1593, 2091, 2111
Eam1105I	GACNNNNNGTC	1 cut(s)	1892
EarI	CTCTTC	4 cut(s)	459, 1593, 2091, 2111
Eco130I	CCWWGG	3 cut(s)	363, 1081, 1881
Eco31I	GGTCTC	1 cut(s)	59
Eco32I	GATATC	2 cut(s)	1091, 1326
Eco47I	GGWCC	3 cut(s)	226, 314, 1886
Eco57I	CTGAAG	3 cut(s)	435, 886, 1823
Eco88I	CYCGRG	1 cut(s)	1454
EcoNI	CCTNNNNNAGG	1 cut(s)	1202
EcoO109I	RGGNCCY	2 cut(s)	314, 1919
EcoRII	CCWGG	1 cut(s)	546
EcoRV	GATATC	2 cut(s)	1091, 1326
EcoT14I	CCWWGG	3 cut(s)	363, 1081, 1881
EcoT22I	ATGCAT	1 cut(s)	1732
ErhI	CCWWGG	3 cut(s)	363, 1081, 1881
Esp3I	CGTCTC	1 cut(s)	1876
FaqI	GGGAC	3 cut(s)	212, 1112, 1899
FauNDI	CATATG	1 cut(s)	202
Fnu4HI	GCNGC	5 cut(s)	425, 470, 950, 1110, 2031
FokI	GGATG	7 cut(s)	315, 343, 941, 971, 1134, 1652, 1949
Fsp4HI	GCNGC	5 cut(s)	425, 470, 950, 1110, 2031
FspAI	RTGCGCAY	1 cut(s)	793
FspBI	CTAG	5 cut(s)	1166, 1199, 1259, 1607, 2156
FspI	TGCGCA	2 cut(s)	793, 2265
GlaI	GCGC	4 cut(s)	793, 1748, 1836, 2265
GluI	GCNGC	5 cut(s)	425, 470, 950, 1110, 2031
HaeII	RGCGCY	1 cut(s)	1838
HaeIII	GGCC	5 cut(s)	1257, 1543, 1921, 2063, 2102
HgaI	GACGC	1 cut(s)	1982
HhaI	GCGC	4 cut(s)	794, 1749, 1837, 2266
Hin1I	GRCGYC	1 cut(s)	1993
Hin6I	GCGC	4 cut(s)	792, 1747, 1835, 2264
HinP1I	GCGC	4 cut(s)	792, 1747, 1835, 2264
HindIII	AAGCTT	1 cut(s)	593
HinfI	GANTC	9 cut(s)	437, 515, 1005, 1076, 1157, 1239, 1645, 1658, 2068
HphI	GGTGA	3 cut(s)	413, 720, 2119
Hpy166II	GTNNAC	3 cut(s)	274, 923, 1612
Hpy188I	TCNGA	9 cut(s)	244, 655, 976, 1060, 1135, 1524, 1597, 1669, 1954
Hpy188III	TCNNGA	9 cut(s)	299, 691, 779, 839, 875, 1151, 1166, 1445, 1513
Hpy8I	GTNNAC	3 cut(s)	274, 923, 1612
HpyAV	CCTTC	7 cut(s)	16, 100, 240, 650, 1291, 1798, 2030
HpyCH4III	ACNGT	8 cut(s)	116, 829, 1122, 1343, 1480, 1552, 1564, 1894
HpyCH4IV	ACGT	6 cut(s)	1012, 1427, 1584, 1764, 1854, 1869
HpyF10VI	GCNNNNNNNGC	3 cut(s)	218, 475, 641
HpyF3I	CTNAG	8 cut(s)	445, 619, 1094, 1227, 1705, 1812, 1923, 1930
HpySE526I	ACGT	6 cut(s)	1012, 1427, 1584, 1764, 1854, 1869
Hsp92I	GRCGYC	1 cut(s)	1993
HspAI	GCGC	4 cut(s)	792, 1747, 1835, 2264
Kzo9I	GATC	5 cut(s)	184, 554, 841, 892, 2200
LguI	GCTCTTC	2 cut(s)	459, 2111
LmnI	GCTCC	2 cut(s)	250, 1670
Lsp1109I	GCAGC	5 cut(s)	411, 481, 936, 1096, 2017
MaeI	CTAG	5 cut(s)	1166, 1199, 1259, 1607, 2156
MaeII	ACGT	6 cut(s)	1012, 1427, 1584, 1764, 1854, 1869
MaeIII	GTNAC	5 cut(s)	336, 669, 1753, 2053, 2293
MalI	GATC	5 cut(s)	186, 556, 843, 894, 2202
MboI	GATC	5 cut(s)	184, 554, 841, 892, 2200
MfeI	CAATTG	1 cut(s)	1622
MflI	RGATCY	1 cut(s)	2200
MhlI	GDGCHC	1 cut(s)	1985
MlsI	TGGCCA	1 cut(s)	2063
MluNI	TGGCCA	1 cut(s)	2063
MlyI	GAGTC	2 cut(s)	446, 999
MmeI	TCCRAC	4 cut(s)	36, 848, 1567, 1761
Mox20I	TGGCCA	1 cut(s)	2063
Mph1103I	ATGCAT	1 cut(s)	1732
MroXI	GAANNNNTTC	3 cut(s)	170, 1161, 1657
MscI	TGGCCA	1 cut(s)	2063
MseI	TTAA	9 cut(s)	414, 563, 597, 723, 1017, 1046, 1223, 1355, 1698
MslI	CAYNNNNRTG	3 cut(s)	940, 1152, 2076
Msp20I	TGGCCA	1 cut(s)	2063
MspR9I	CCNGG	1 cut(s)	548
MunI	CAATTG	1 cut(s)	1622
Mva1269I	GAATGC	3 cut(s)	272, 820, 1730
MvaI	CCWGG	1 cut(s)	548
MwoI	GCNNNNNNNGC	3 cut(s)	218, 475, 641
NdeI	CATATG	1 cut(s)	202
NdeII	GATC	5 cut(s)	184, 554, 841, 892, 2200
NlaIV	GGNNCC	7 cut(s)	228, 252, 315, 985, 1500, 1594, 1887
NmuCI	GTSAC	2 cut(s)	669, 1753
NsbI	TGCGCA	2 cut(s)	793, 2265
NsiI	ATGCAT	1 cut(s)	1732
NspI	RCATGY	1 cut(s)	372
PaeR7I	CTCGAG	1 cut(s)	1454
PagI	TCATGA	2 cut(s)	298, 690
PasI	CCCWGGG	1 cut(s)	547
PciSI	GCTCTTC	2 cut(s)	459, 2111
PcsI	WCGNNNNNNNCGW	2 cut(s)	1009, 1433
PctI	GAATGC	3 cut(s)	272, 820, 1730
PdmI	GAANNNNTTC	3 cut(s)	170, 1161, 1657
PfeI	GAWTC	7 cut(s)	515, 1076, 1157, 1239, 1645, 1658, 2068
Pfl23II	CGTACG	1 cut(s)	1866
PkrI	GCNGC	5 cut(s)	426, 471, 951, 1111, 2032
PleI	GAGTC	2 cut(s)	445, 999
PpsI	GAGTC	2 cut(s)	445, 999
Ppu21I	YACGTR	3 cut(s)	1013, 1428, 1855
PpuMI	RGGWCCY	1 cut(s)	314
Psp5II	RGGWCCY	1 cut(s)	314
Psp6I	CCWGG	1 cut(s)	546
PspGI	CCWGG	1 cut(s)	546
PspLI	CGTACG	1 cut(s)	1866
PspN4I	GGNNCC	7 cut(s)	228, 252, 315, 985, 1500, 1594, 1887
PspPI	GGNCC	5 cut(s)	226, 314, 1541, 1886, 1919
PspPPI	RGGWCCY	1 cut(s)	314
PspXI	VCTCGAGB	1 cut(s)	1454
PstI	CTGCAG	1 cut(s)	954
PstNI	CAGNNNCTG	3 cut(s)	458, 945, 980
PsuI	RGATCY	1 cut(s)	2200
RsaI	GTAC	6 cut(s)	698, 924, 1345, 1554, 1868, 1944
RsaNI	GTAC	6 cut(s)	697, 923, 1344, 1553, 1867, 1943
RseI	CAYNNNNRTG	3 cut(s)	940, 1152, 2076
SapI	GCTCTTC	2 cut(s)	459, 2111
SaqAI	TTAA	9 cut(s)	414, 563, 597, 723, 1017, 1046, 1223, 1355, 1698
SatI	GCNGC	5 cut(s)	425, 470, 950, 1110, 2031
Sau3AI	GATC	5 cut(s)	184, 554, 841, 892, 2200
Sau96I	GGNCC	5 cut(s)	226, 314, 1541, 1886, 1919
SchI	GAGTC	2 cut(s)	446, 999
ScrFI	CCNGG	1 cut(s)	548
SduI	GDGCHC	1 cut(s)	1985
SfcI	CTRYAG	1 cut(s)	950
Sfr274I	CTCGAG	1 cut(s)	1454
SinI	GGWCC	3 cut(s)	226, 314, 1886
SlaI	CTCGAG	1 cut(s)	1454
SmiMI	CAYNNNNRTG	3 cut(s)	940, 1152, 2076
SmlI	CTYRAG	2 cut(s)	1454, 1790
SmoI	CTYRAG	2 cut(s)	1454, 1790
SpeI	ACTAGT	2 cut(s)	1606, 2155
SsiI	CCGC	1 cut(s)	2033
SspI	AATATT	3 cut(s)	498, 1381, 2224
SspMI	CTAG	5 cut(s)	1166, 1199, 1259, 1607, 2156
StyD4I	CCNGG	1 cut(s)	546
StyI	CCWWGG	3 cut(s)	363, 1081, 1881
TaaI	ACNGT	8 cut(s)	116, 829, 1122, 1343, 1480, 1552, 1564, 1894
TaiI	ACGT	6 cut(s)	1015, 1430, 1587, 1767, 1857, 1872
TaqI	TCGA	7 cut(s)	435, 895, 1003, 1307, 1436, 1455, 1569
TatI	WGTACW	2 cut(s)	922, 1343
TfiI	GAWTC	7 cut(s)	515, 1076, 1157, 1239, 1645, 1658, 2068
Tru1I	TTAA	9 cut(s)	414, 563, 597, 723, 1017, 1046, 1223, 1355, 1698
Tru9I	TTAA	9 cut(s)	414, 563, 597, 723, 1017, 1046, 1223, 1355, 1698
TscAI	CASTG	8 cut(s)	130, 214, 1108, 1416, 1494, 1756, 1938, 2266
TseFI	GTSAC	2 cut(s)	669, 1753
TseI	GCWGC	5 cut(s)	424, 469, 949, 1109, 2030
Tsp45I	GTSAC	2 cut(s)	669, 1753
TspGWI	ACGGA	2 cut(s)	1498, 1960
TspRI	CASTG	8 cut(s)	130, 214, 1108, 1416, 1494, 1756, 1938, 2266
VpaK11BI	GGWCC	3 cut(s)	226, 314, 1886
XagI	CCTNNNNNAGG	1 cut(s)	1202
XapI	RAATTY	4 cut(s)	136, 238, 1192, 1208
XbaI	TCTAGA	1 cut(s)	1165
XceI	RCATGY	1 cut(s)	372
XhoI	CTCGAG	1 cut(s)	1454
XmnI	GAANNNNTTC	3 cut(s)	170, 1161, 1657
XspI	CTAG	5 cut(s)	1166, 1199, 1259, 1607, 2156
Zsp2I	ATGCAT	1 cut(s)	1732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.