Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001708

Physical Location & Seq

Genomic Coordinates Forward (+)

18251710 .. 18266929

Gene Structure 15220 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G015110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

ATGTTCAACAAGGTTGATCTCTCTGTTTCCTCATATGACACTGCTTGGGTGGCAATGGTCCCTTCTCCAAATTCTGAAAAGGAGCCTTTTTTCCCTGAATGCGTAAACTGGTTATTGGATAATCAACTTCATGATGGCTCATGGGGTCCTCCTAATTTGCATCCATTGTTAACAAAAGATGCTCACTCATCCACCTTGGCATGTATCCTTGCACTAAAGCAATGGAGTGTCGGTGAAGAACAAATTAACAAGGGGCTGCATTTTATCGAGTCAAACTTAGCTTCAGCTACTGATGAAGAGCAGCCATCGCCTGTTGGGTTTGCTATAATATTTCCTGCTATGATTGAATCTGCAATGAGTTTGAATATCAATCTTACCCAGGGTGGATCAACCTTAAAGGCTTTATTTCACAGGAGAGACTTGAAGTTTAAAAGAGGCTATGGAAACAACTTAGAGGGGTGGAAAGCCTATATAGCATATATTTCAGAAGGAATTGGAAAGTCACAGGATTGGAAGATGGTCATGAAGTACCAAAGGAAGAACGGGTCTTTGTTTAATTCACCATCAACTACTGCTTCTGCTTTTACTCACAGCAAGAGTGCTGGTTGTCTTGATTACCTATGCGCACTCATAGAGAAGTTTGGGAATGCAGTTCCAACAGTTTATCCTCTGGATCACTATGCTCGTCATTCTATGGTTTCAACTCTTGATAGTTTGGGTATTGATCGACACTTAAGGGAGGAAATTAGGAGTGTACTGGATGAAACATACAGATGCTGGCTGCAGGGGGATGAAGATATATTTTCAGATGCTGGCACCTGTGCTATGGCATTTCGACTCTTACATCGGTTAAATCAATTTTCAGAAGACCATTTCTTTGGTTTCCTTGGAGGATATCTAAGGGACACTGATGCTGCATTAGAACTGTTTAGGGCATCGGAAGTCATCATTCATCCAGATGAATCAGTTCTAGAGAAACAAAATTACTGGACAAGGAATTTCCTAAAACAGGAATTTTCTAATAATTTAACTCAGCCTCACAGAATCAATAAGCATATTGGCCTAGAGGTGGTTGATGCTCTTAAGTTTCCTTCCTATGGTACTTTGGGTCGGTTATCGAGCAGGAGGGCAATGATATCTTACAACACCAGCAGTACAAGGATTTTAAAATCTTCTTATCGTTGTTTGAATATTGGGAATGAAGACTTCCTAAAACTGGCAGTGGAAGACTTCAATACGTGCCAATCGATACATCGGGAAGAACTCGAGCATCTTTCAAGGTGGGTTATCGAGAGCAGATTAGACAAGCTAAAATTTGCCAGGCAGAAGCTGGCTTACTGTTATTTCACTGCTGCTGGAACCCTTTTCCCTCCTGAACTATCAGATGCTCGCATATCATGGGCCAAAAACGGAGTACTTACAACTGTGGTCGATGATTTCTTTGACGTTGGAGGTTCCGAAGAGGAACTAGTAAACCTTATACAATTGGTTGAGAAGTGGGATGTGAATCCAAGAACCGATTCTTGCTCCGAGAATGTTGAAATCGTTTTTTCAGCAATTAAGAGCTTAGTTAGTGAGATTGGCATCAATGCATTCGCAAGGCAAGAGCGCAGTGTGACAAATCACGTCATTGAGATTTGGTTGGATTTGCTCAAAGCTATGCTGAAGGAAGCTAAGTGGTTGATAAACAAGTCAGCGCCAACAATGGAGGAATACATGGAAAATGCGTACGTCTCATTTGCCTTGGGACCTAATGTCCTTTCAAATCTCTGTTTGGTAGGGCCTAAGCTCTCAGAGGATGCTGTACGGAGTTCGGAATACTACCATCTGTATAGACTAATGAGCACTTTTGGGCGTCTTCTCAATGATATGCAAAGCTATAAGAGGGAAGCTGCGGAAGGGAAGCTAAATGCTGTAACATTGGCCATGATTCATGGTAATGGTAGTGTTAGCGAAGAAGAGGCCATCAATGAGATGAAGAGCATTATCACCAGTAAGAGGAGAGAACTGCAAAGACTAGTTTTGCAGGACAAGGATAGTGTAGTTCCAAGAGCTTGCAAGGATCTTTTTTGGAACATCGGCAATATTTTGCATCTATTTTATGAAAGGCACGATGGATACGCTGCGCATGACATGATGAAAACTGTAAATGAAGTAACAGAAGAACCCATCATTCTCAATGCAAAGCAAGCAAGTGAATGGCATGTACAGCTAGTTACAAAGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009899 GO:0009987 GO:0010033 GO:0010333 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

742

Amino Acids

84.27

Weight (kDa)

5.79

Isoelectric Point (pI)

51.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	170 - 353	5.4e-28	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	433 - 668	1.2e-69	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	471 - 668	1.9e-42	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001708)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79460
fragaria_vesca	FvH4_3g14116 FvH4_3g14130 FvH4_3g14131 FvH4_3g16270
malus_domestica	MD03G1187200.v1.1 MD10G1215700.v1.1 MD10G1215900.v1.1 MD10G1216200.v1.1
prunus_persica	Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128600_v2.0.a1 Prupe.4G128700_v2.0.a1
pyrus_communis	pycom03g13990 pycom10g18220
rosa_chinensis	RchiOBHm_Chr5g0023441 RchiOBHm_Chr5g0023471 RchiOBHm_Chr5g0023641
rosa_laevigata	RLG00000032721
rosa_multiflora	Rmu_co8406553.1_g000001 Rmu_sc0004593.1_g000004 Rmu_sc0005664.1_g000001 Rmu_sc0005664.1_g000005
rosa_roxburghii	Rroxscaffold_1G00055600 Rroxscaffold_1G00055620 Rroxscaffold_1G00055910
rosa_rugosa	Rorug05G0079200 Rorug05G0079300
rosa_samantha	Rh5AG166100 Rh5AG166200 Rh5AG166300 Rh5AG167600 Rh5AG168000 Rh5BG165300 Rh5BG165500 Rh5CG180300 Rh5CG180400 Rh5CG181400 Rh5DG166800 Rh5DG166900 Rh5DG167800
rosa_wichuraiana	Rw0G019600 Rw5G014950 Rw5G014970 Rw5G015110 Rw5G015120 Rw5G015210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	625, 2127
AccB1I	GGYRCC	1 cut(s)	815
AciI	CCGC	1 cut(s)	1895
AclWI	GGATC	3 cut(s)	394, 681, 2070
AcoI	YGGCCR	1 cut(s)	1923
AcsI	RAATTY	4 cut(s)	70, 997, 1013, 1313
AcuI	CTGAAG	2 cut(s)	267, 1685
AcyI	GRCGYC	1 cut(s)	1855
AfaI	GTAC	8 cut(s)	530, 756, 1102, 1156, 1416, 1730, 1806, 2208
AfiI	CCNNNNNNNGG	5 cut(s)	1009, 1069, 1097, 1216, 1998
AflII	CTTAAG	2 cut(s)	733, 1082
AhdI	GACNNNNNGTC	1 cut(s)	1754
AhlI	ACTAGT	2 cut(s)	1468, 2017
AjiI	CACGTC	1 cut(s)	1627
AjnI	CCWGG	2 cut(s)	378, 1319
AjuI	GAANNNNNNNTTGG	2 cut(s)	1504, 1536
Alw21I	GWGCWC	1 cut(s)	1847
Alw26I	GTCTC	2 cut(s)	411, 1738
AlwI	GGATC	3 cut(s)	394, 681, 2070
AlwNI	CAGNNNCTG	4 cut(s)	290, 777, 812, 1330
Ama87I	CYCGRG	1 cut(s)	1265
AoxI	GGCC	5 cut(s)	1060, 1401, 1781, 1923, 1962
ApeKI	GCWGC	7 cut(s)	256, 301, 781, 914, 1352, 1892, 2123
ApoI	RAATTY	4 cut(s)	70, 997, 1013, 1313
ArsI	GACNNNNNNTTYG	2 cut(s)	860, 892
Asp700I	GAANNNNTTC	2 cut(s)	966, 1519
AspLEI	GCGC	4 cut(s)	626, 1611, 1699, 2128
AspS9I	GGNCC	5 cut(s)	58, 146, 1401, 1748, 1781
AsuHPI	GGTGA	3 cut(s)	245, 552, 1981
AvaI	CYCGRG	1 cut(s)	1265
AvaII	GGWCC	3 cut(s)	58, 146, 1748
BalI	TGGCCA	1 cut(s)	1925
BanI	GGYRCC	1 cut(s)	815
BarI	GAAGNNNNNNTAC	2 cut(s)	1319, 1351
BbsI	GAAGAC	4 cut(s)	873, 1209, 1233, 1850
Bbv12I	GWGCWC	1 cut(s)	1847
BbvI	GCAGC	7 cut(s)	243, 313, 768, 901, 1339, 1879, 2110
BccI	CCATC	8 cut(s)	128, 313, 511, 571, 1833, 1973, 2108, 2177
BciT130I	CCWGG	2 cut(s)	380, 1321
BciVI	GTATCC	2 cut(s)	215, 2111
BcoDI	GTCTC	2 cut(s)	411, 1738
BcuI	ACTAGT	2 cut(s)	1468, 2017
BfaI	CTAG	6 cut(s)	971, 1064, 1469, 2018, 2213, 2227
BfmI	CTRYAG	1 cut(s)	782
BfoI	RGCGCY	1 cut(s)	1700
BfrI	CTTAAG	2 cut(s)	733, 1082
BfuI	GTATCC	2 cut(s)	215, 2111
BisI	GCNGC	7 cut(s)	257, 302, 782, 915, 1353, 1893, 2124
BlsI	GCNGC	7 cut(s)	258, 303, 783, 916, 1354, 1894, 2125
BmcAI	AGTACT	1 cut(s)	1416
Bme1390I	CCNGG	2 cut(s)	380, 1321
Bme18I	GGWCC	3 cut(s)	58, 146, 1748
BmeRI	GACNNNNNGTC	1 cut(s)	1754
BmeT110I	CYCGRG	1 cut(s)	1265
BmgBI	CACGTC	1 cut(s)	1627
BmgT120I	GGNCC	5 cut(s)	58, 146, 1401, 1748, 1781
BmiI	GGNNCC	7 cut(s)	60, 84, 147, 817, 1360, 1456, 1749
BmrFI	CCNGG	2 cut(s)	380, 1321
BpiI	GAAGAC	4 cut(s)	873, 1209, 1233, 1850
Bpu10I	CCTNAGC	1 cut(s)	1785
Bsa29I	ATCGAT	1 cut(s)	1247
BsaAI	YACGTR	1 cut(s)	1239
BsaBI	GATNNNNATC	2 cut(s)	1506, 1583
BsaHI	GRCGYC	1 cut(s)	1855
BsaJI	CCNNGG	5 cut(s)	195, 378, 379, 886, 1743
BsaXI	ACNNNNNCTCC	2 cut(s)	217, 247
Bsc4I	CCNNNNNNNGG	5 cut(s)	1009, 1069, 1097, 1216, 1998
Bse1I	ACTGG	5 cut(s)	113, 762, 992, 1221, 1992
Bse3DI	GCAATG	4 cut(s)	60, 227, 360, 1137
Bse8I	GATNNNNATC	2 cut(s)	1506, 1583
BseBI	CCWGG	2 cut(s)	380, 1321
BseCI	ATCGAT	1 cut(s)	1247
BseDI	CCNNGG	5 cut(s)	195, 378, 379, 886, 1743
BseGI	GGATG	7 cut(s)	160, 188, 766, 796, 952, 1507, 1804
BseJI	GATNNNNATC	2 cut(s)	1506, 1583
BseLI	CCNNNNNNNGG	5 cut(s)	1009, 1069, 1097, 1216, 1998
BseMI	GCAATG	4 cut(s)	60, 227, 360, 1137
BseMII	CTCAG	2 cut(s)	1046, 1806
BseNI	ACTGG	5 cut(s)	113, 762, 992, 1221, 1992
BseRI	GAGGAG	1 cut(s)	2014
BseXI	GCAGC	7 cut(s)	243, 313, 768, 901, 1339, 1879, 2110
BshFI	GGCC	5 cut(s)	1062, 1403, 1783, 1925, 1964
BshNI	GGYRCC	1 cut(s)	815
BshVI	ATCGAT	1 cut(s)	1247
BsiHKAI	GWGCWC	1 cut(s)	1847
BsiHKCI	CYCGRG	1 cut(s)	1265
BsiWI	CGTACG	1 cut(s)	1728
BslFI	GGGAC	3 cut(s)	44, 917, 1761
BslI	CCNNNNNNNGG	5 cut(s)	1009, 1069, 1097, 1216, 1998
BsmAI	GTCTC	2 cut(s)	411, 1738
BsmBI	CGTCTC	1 cut(s)	1738
BsmFI	GGGAC	3 cut(s)	44, 917, 1761
BsmI	GAATGC	3 cut(s)	104, 652, 1592
BsnI	GGCC	5 cut(s)	1062, 1403, 1783, 1925, 1964
BsoBI	CYCGRG	1 cut(s)	1265
Bsp1286I	GDGCHC	1 cut(s)	1847
Bsp1407I	TGTACA	1 cut(s)	2206
Bsp143I	GATC	5 cut(s)	16, 386, 673, 724, 2062
BspACI	CCGC	1 cut(s)	1895
BspANI	GGCC	5 cut(s)	1062, 1403, 1783, 1925, 1964
BspCNI	CTCAG	2 cut(s)	1045, 1805
BspDI	ATCGAT	1 cut(s)	1247
BspHI	TCATGA	2 cut(s)	130, 522
BspLI	GGNNCC	7 cut(s)	60, 84, 147, 817, 1360, 1456, 1749
BspMAI	CTGCAG	1 cut(s)	786
BspPI	GGATC	3 cut(s)	394, 681, 2070
BspQI	GCTCTTC	2 cut(s)	291, 1973
BspT107I	GGYRCC	1 cut(s)	815
BspTI	CTTAAG	2 cut(s)	733, 1082
BsrDI	GCAATG	4 cut(s)	60, 227, 360, 1137
BsrGI	TGTACA	1 cut(s)	2206
BsrI	ACTGG	5 cut(s)	113, 762, 992, 1221, 1992
BssECI	CCNNGG	5 cut(s)	195, 378, 379, 886, 1743
BssMI	GATC	5 cut(s)	16, 386, 673, 724, 2062
BssNI	GRCGYC	1 cut(s)	1855
BssT1I	CCWWGG	3 cut(s)	195, 886, 1743
Bst2UI	CCWGG	2 cut(s)	380, 1321
Bst4CI	ACNGT	5 cut(s)	661, 927, 1340, 1426, 2146
Bst6I	CTCTTC	4 cut(s)	291, 1455, 1953, 1973
BstACI	GRCGYC	1 cut(s)	1855
BstAFI	CTTAAG	2 cut(s)	733, 1082
BstAUI	TGTACA	1 cut(s)	2206
BstBAI	YACGTR	1 cut(s)	1239
BstC8I	GCNNGC	6 cut(s)	779, 814, 1332, 1390, 2056, 2190
BstDEI	CTNAG	8 cut(s)	277, 451, 899, 1032, 1567, 1674, 1785, 1792
BstENI	CCTNNNNNAGG	1 cut(s)	1007
BstF5I	GGATG	7 cut(s)	160, 188, 766, 796, 952, 1507, 1804
BstH2I	RGCGCY	1 cut(s)	1700
BstHHI	GCGC	4 cut(s)	626, 1611, 1699, 2128
BstKTI	GATC	5 cut(s)	19, 389, 676, 727, 2065
BstMAI	GTCTC	2 cut(s)	411, 1738
BstMBI	GATC	5 cut(s)	16, 386, 673, 724, 2062
BstMWI	GCNNNNNNNGC	5 cut(s)	50, 307, 473, 2189, 2209
BstNI	CCWGG	2 cut(s)	380, 1321
BstNSI	RCATGY	2 cut(s)	204, 2207
BstSCI	CCNGG	2 cut(s)	378, 1319
BstSFI	CTRYAG	1 cut(s)	782
BstV1I	GCAGC	7 cut(s)	243, 313, 768, 901, 1339, 1879, 2110
BstV2I	GAAGAC	4 cut(s)	873, 1209, 1233, 1850
BstX2I	RGATCY	1 cut(s)	2062
BstXI	CCANNNNNNTGG	1 cut(s)	878
BstYI	RGATCY	1 cut(s)	2062
Bsu15I	ATCGAT	1 cut(s)	1247
BsuI	GTATCC	2 cut(s)	215, 2111
BsuRI	GGCC	5 cut(s)	1062, 1403, 1783, 1925, 1964
BsuTUI	ATCGAT	1 cut(s)	1247
BtgZI	GCGATG	1 cut(s)	291
BtrI	CACGTC	1 cut(s)	1627
BtsCI	GGATG	7 cut(s)	160, 188, 766, 796, 952, 1507, 1804
BtsI	GCAGTG	4 cut(s)	39, 1227, 1347, 1618
BtsIMutI	CAGTG	5 cut(s)	39, 906, 1227, 1347, 1618
Cac8I	GCNNGC	6 cut(s)	779, 814, 1332, 1390, 2056, 2190
CaiI	CAGNNNCTG	4 cut(s)	290, 777, 812, 1330
CciI	TCATGA	2 cut(s)	130, 522
CfoI	GCGC	4 cut(s)	626, 1611, 1699, 2128
Cfr13I	GGNCC	5 cut(s)	58, 146, 1401, 1748, 1781
ClaI	ATCGAT	1 cut(s)	1247
CseI	GACGC	1 cut(s)	1844
Csp6I	GTAC	8 cut(s)	529, 755, 1101, 1155, 1415, 1729, 1805, 2207
CviQI	GTAC	8 cut(s)	529, 755, 1101, 1155, 1415, 1729, 1805, 2207
DdeI	CTNAG	8 cut(s)	277, 451, 899, 1032, 1567, 1674, 1785, 1792
DpnI	GATC	5 cut(s)	18, 388, 675, 726, 2064
DpnII	GATC	5 cut(s)	16, 386, 673, 724, 2062
DraI	TTTAAA	2 cut(s)	430, 1167
DriI	GACNNNNNGTC	1 cut(s)	1754
EaeI	YGGCCR	1 cut(s)	1923
Eam1104I	CTCTTC	4 cut(s)	291, 1455, 1953, 1973
Eam1105I	GACNNNNNGTC	1 cut(s)	1754
EarI	CTCTTC	4 cut(s)	291, 1455, 1953, 1973
Eco130I	CCWWGG	3 cut(s)	195, 886, 1743
Eco32I	GATATC	2 cut(s)	896, 1137
Eco47I	GGWCC	3 cut(s)	58, 146, 1748
Eco57I	CTGAAG	2 cut(s)	267, 1685
Eco88I	CYCGRG	1 cut(s)	1265
EcoNI	CCTNNNNNAGG	1 cut(s)	1007
EcoO109I	RGGNCCY	3 cut(s)	146, 1748, 1781
EcoRII	CCWGG	2 cut(s)	378, 1319
EcoRV	GATATC	2 cut(s)	896, 1137
EcoT14I	CCWWGG	3 cut(s)	195, 886, 1743
EcoT22I	ATGCAT	1 cut(s)	1594
ErhI	CCWWGG	3 cut(s)	195, 886, 1743
Esp3I	CGTCTC	1 cut(s)	1738
FaqI	GGGAC	3 cut(s)	44, 917, 1761
FauNDI	CATATG	1 cut(s)	34
Fnu4HI	GCNGC	7 cut(s)	257, 302, 782, 915, 1353, 1893, 2124
FokI	GGATG	7 cut(s)	147, 175, 773, 803, 939, 1514, 1811
Fsp4HI	GCNGC	7 cut(s)	257, 302, 782, 915, 1353, 1893, 2124
FspAI	RTGCGCAY	1 cut(s)	625
FspBI	CTAG	6 cut(s)	971, 1064, 1469, 2018, 2213, 2227
FspI	TGCGCA	2 cut(s)	625, 2127
GlaI	GCGC	4 cut(s)	625, 1610, 1698, 2127
GluI	GCNGC	7 cut(s)	257, 302, 782, 915, 1353, 1893, 2124
HaeII	RGCGCY	1 cut(s)	1700
HaeIII	GGCC	5 cut(s)	1062, 1403, 1783, 1925, 1964
HgaI	GACGC	1 cut(s)	1844
HhaI	GCGC	4 cut(s)	626, 1611, 1699, 2128
Hin1I	GRCGYC	1 cut(s)	1855
Hin6I	GCGC	4 cut(s)	624, 1609, 1697, 2126
HinP1I	GCGC	4 cut(s)	624, 1609, 1697, 2126
HincII	GTYRAC	1 cut(s)	171
HindII	GTYRAC	1 cut(s)	171
HinfI	GANTC	8 cut(s)	269, 347, 837, 962, 1044, 1507, 1520, 1930
HpaI	GTTAAC	1 cut(s)	171
HphI	GGTGA	3 cut(s)	245, 552, 1981
Hpy166II	GTNNAC	4 cut(s)	106, 171, 755, 1474
Hpy8I	GTNNAC	4 cut(s)	106, 171, 755, 1474
HpyAV	CCTTC	5 cut(s)	72, 482, 1101, 1660, 1892
HpyCH4III	ACNGT	5 cut(s)	661, 927, 1340, 1426, 2146
HpyCH4IV	ACGT	4 cut(s)	1238, 1446, 1626, 1731
HpyF10VI	GCNNNNNNNGC	5 cut(s)	50, 307, 473, 2189, 2209
HpyF3I	CTNAG	8 cut(s)	277, 451, 899, 1032, 1567, 1674, 1785, 1792
HpySE526I	ACGT	4 cut(s)	1238, 1446, 1626, 1731
Hsp92I	GRCGYC	1 cut(s)	1855
HspAI	GCGC	4 cut(s)	624, 1609, 1697, 2126
KspAI	GTTAAC	1 cut(s)	171
Kzo9I	GATC	5 cut(s)	16, 386, 673, 724, 2062
LguI	GCTCTTC	2 cut(s)	291, 1973
LmnI	GCTCC	2 cut(s)	82, 1532
Lsp1109I	GCAGC	7 cut(s)	243, 313, 768, 901, 1339, 1879, 2110
MaeI	CTAG	6 cut(s)	971, 1064, 1469, 2018, 2213, 2227
MaeII	ACGT	4 cut(s)	1238, 1446, 1626, 1731
MaeIII	GTNAC	5 cut(s)	501, 1615, 1915, 2155, 2215
MalI	GATC	5 cut(s)	18, 388, 675, 726, 2064
MboI	GATC	5 cut(s)	16, 386, 673, 724, 2062
MfeI	CAATTG	1 cut(s)	1484
MflI	RGATCY	1 cut(s)	2062
MhlI	GDGCHC	1 cut(s)	1847
MlsI	TGGCCA	1 cut(s)	1925
MluNI	TGGCCA	1 cut(s)	1925
MlyI	GAGTC	2 cut(s)	278, 831
MmeI	TCCRAC	3 cut(s)	680, 1429, 1623
Mox20I	TGGCCA	1 cut(s)	1925
Mph1103I	ATGCAT	1 cut(s)	1594
MroXI	GAANNNNTTC	2 cut(s)	966, 1519
MscI	TGGCCA	1 cut(s)	1925
MslI	CAYNNNNRTG	3 cut(s)	772, 957, 1938
Msp20I	TGGCCA	1 cut(s)	1925
MspCI	CTTAAG	2 cut(s)	733, 1082
MspR9I	CCNGG	2 cut(s)	380, 1321
MunI	CAATTG	1 cut(s)	1484
Mva1269I	GAATGC	3 cut(s)	104, 652, 1592
MvaI	CCWGG	2 cut(s)	380, 1321
MwoI	GCNNNNNNNGC	5 cut(s)	50, 307, 473, 2189, 2209
NdeI	CATATG	1 cut(s)	34
NdeII	GATC	5 cut(s)	16, 386, 673, 724, 2062
NlaIV	GGNNCC	7 cut(s)	60, 84, 147, 817, 1360, 1456, 1749
NmuCI	GTSAC	2 cut(s)	501, 1615
NsbI	TGCGCA	2 cut(s)	625, 2127
NsiI	ATGCAT	1 cut(s)	1594
NspI	RCATGY	2 cut(s)	204, 2207
PaeR7I	CTCGAG	1 cut(s)	1265
PagI	TCATGA	2 cut(s)	130, 522
PasI	CCCWGGG	1 cut(s)	379
PciSI	GCTCTTC	2 cut(s)	291, 1973
PcsI	WCGNNNNNNNCGW	1 cut(s)	1244
PctI	GAATGC	3 cut(s)	104, 652, 1592
PdmI	GAANNNNTTC	2 cut(s)	966, 1519
PfeI	GAWTC	6 cut(s)	347, 962, 1044, 1507, 1520, 1930
Pfl23II	CGTACG	1 cut(s)	1728
PkrI	GCNGC	7 cut(s)	258, 303, 783, 916, 1354, 1894, 2125
PleI	GAGTC	2 cut(s)	277, 831
PpsI	GAGTC	2 cut(s)	277, 831
Ppu21I	YACGTR	1 cut(s)	1239
PpuMI	RGGWCCY	2 cut(s)	146, 1748
Psp5II	RGGWCCY	2 cut(s)	146, 1748
Psp6I	CCWGG	2 cut(s)	378, 1319
PspGI	CCWGG	2 cut(s)	378, 1319
PspLI	CGTACG	1 cut(s)	1728
PspN4I	GGNNCC	7 cut(s)	60, 84, 147, 817, 1360, 1456, 1749
PspPI	GGNCC	5 cut(s)	58, 146, 1401, 1748, 1781
PspPPI	RGGWCCY	2 cut(s)	146, 1748
PspXI	VCTCGAGB	1 cut(s)	1265
PstI	CTGCAG	1 cut(s)	786
PstNI	CAGNNNCTG	4 cut(s)	290, 777, 812, 1330
PsuI	RGATCY	1 cut(s)	2062
RsaI	GTAC	8 cut(s)	530, 756, 1102, 1156, 1416, 1730, 1806, 2208
RsaNI	GTAC	8 cut(s)	529, 755, 1101, 1155, 1415, 1729, 1805, 2207
RseI	CAYNNNNRTG	3 cut(s)	772, 957, 1938
SapI	GCTCTTC	2 cut(s)	291, 1973
SatI	GCNGC	7 cut(s)	257, 302, 782, 915, 1353, 1893, 2124
Sau3AI	GATC	5 cut(s)	16, 386, 673, 724, 2062
Sau96I	GGNCC	5 cut(s)	58, 146, 1401, 1748, 1781
ScaI	AGTACT	1 cut(s)	1416
SchI	GAGTC	2 cut(s)	278, 831
ScrFI	CCNGG	2 cut(s)	380, 1321
SduI	GDGCHC	1 cut(s)	1847
SfcI	CTRYAG	1 cut(s)	782
Sfr274I	CTCGAG	1 cut(s)	1265
SinI	GGWCC	3 cut(s)	58, 146, 1748
SlaI	CTCGAG	1 cut(s)	1265
SmiMI	CAYNNNNRTG	3 cut(s)	772, 957, 1938
SmlI	CTYRAG	3 cut(s)	733, 1082, 1265
SmoI	CTYRAG	3 cut(s)	733, 1082, 1265
SpeI	ACTAGT	2 cut(s)	1468, 2017
SsiI	CCGC	1 cut(s)	1895
SspI	AATATT	3 cut(s)	330, 1192, 2086
SspMI	CTAG	6 cut(s)	971, 1064, 1469, 2018, 2213, 2227
StyD4I	CCNGG	2 cut(s)	378, 1319
StyI	CCWWGG	3 cut(s)	195, 886, 1743
TaaI	ACNGT	5 cut(s)	661, 927, 1340, 1426, 2146
TaiI	ACGT	4 cut(s)	1241, 1449, 1629, 1734
TaqI	TCGA	8 cut(s)	267, 727, 835, 1118, 1247, 1266, 1290, 1431
TatI	WGTACW	4 cut(s)	754, 1154, 1414, 2206
TfiI	GAWTC	6 cut(s)	347, 962, 1044, 1507, 1520, 1930
TscAI	CASTG	5 cut(s)	46, 913, 1227, 1354, 1618
TseFI	GTSAC	2 cut(s)	501, 1615
TseI	GCWGC	7 cut(s)	256, 301, 781, 914, 1352, 1892, 2123
Tsp45I	GTSAC	2 cut(s)	501, 1615
TspGWI	ACGGA	2 cut(s)	1425, 1822
TspRI	CASTG	5 cut(s)	46, 913, 1227, 1354, 1618
Vha464I	CTTAAG	2 cut(s)	733, 1082
VpaK11BI	GGWCC	3 cut(s)	58, 146, 1748
XagI	CCTNNNNNAGG	1 cut(s)	1007
XapI	RAATTY	4 cut(s)	70, 997, 1013, 1313
XbaI	TCTAGA	1 cut(s)	970
XceI	RCATGY	2 cut(s)	204, 2207
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1327
XhoI	CTCGAG	1 cut(s)	1265
XmnI	GAANNNNTTC	2 cut(s)	966, 1519
XspI	CTAG	6 cut(s)	971, 1064, 1469, 2018, 2213, 2227
ZrmI	AGTACT	1 cut(s)	1416
Zsp2I	ATGCAT	1 cut(s)	1594

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.