Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0001708

Physical Location & Seq

Genomic Coordinates Forward (+)

17863973 .. 17878227

Gene Structure 14255 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG166100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1908 bp

ATGTTCAACAAGGTTGATCTCTCTGTTTCCTCATATGACACTGCTTGGGTGGCAATGGTCCCTTCTCCAAATTCTGAAAAGGAGCCTTTTTTCCCTGAATGCGTAAACTGGTTATTGGATAATCAACTTCATGATGGCTCATGGGGTCCTCCTAATTTGCATCCATTGTTAACAAAAGATGCTCACTCATCCACCTTGGCATGTATCCTTGCACTAAAGCAATGGAGTGTCGGTGAAGAACAAATTAACAAGGGGCTGCATTTTATCGAGTCAAACTTAGCTTCAGCTACTGATGAAGAGCAGCCATCGCCTGTTGGGTTTGCTATAATATTTCCTGCTATGATTGAATCTGCAATGAGTTTGAATATCAATCTTACCCAGGGTGGATCAACCTTAAAGGCTTTATTTCACAGGAGAGACTTGAAGTTTAAAAGAGGCTATGGAAACAACTTAGAGGGGTGGAAAGCCTATATAGCATATATTTCAGAAGGAATTGGAAAGTCACAGGATTGGAAGATGGTCATGAAGTACCAAAGGAAGAACGGGTCTTTGTTTAATTCACCATCAACTACTGCTTCTGCTTTTACTCACAGCAAGAGTGCTGGTTGTCTTGATTACCTATGCGCACTCATAGAGAAGTTTGGGAATGCAGTTCCAACAGTTTATCCTCTGGATCACTATGCTCGTCATTCTATGGTTTCAACTCTTGATAGTTTGGGTATTGATCGACACTTAAGGGAGGAAATTAGGAGTGTACTGGATGAAACATACAGATGCTGGCTGCAGGGGGATGAAGATATATTTTCAGATGCTGGCACCTGTGCTATGGCATTTCGACTCTTACATCGGTTAAATCAATTTTCAGAAGACCATTTCTTTGGTTTCCTTGGAGGATATCTAAGGGACACTGATGCTGCATTAGAACTGTTTAGGGCATCGGAAGTCATCATTCATCCAGATGAATCAGTTCTAGAGAAACAAAATTACTGGACAAGGAATTTCCTAAAACAGGAATTTTCTAATAATTTAACTCAGCCTCACAGAATCAATAAGCATATTGGCCTAGAGGTGGTTGATGCTCTTAAGTTTCCTTCCTATGGTACTTTGGGTCGGTTATCGAGCAGGAGGGCAATGATATCTTACAACACCAGCAGTACAAGGATTTTAAAATCTTCTTATCGTTGTTTGAATATTGGGAATGAAGACTTCCTAAAACTGGCAGTGGAAGACTTCAATACGTGCCAATCGATACATCGGGAAGAACTCGAGCATCTTTCAAGGTGGGTTATCGAGAGCAGATTAGACAAGCTAAAATTTGCCAGGCAGAAGCTGGCTTACTGTTATTTCACTGCTGCTGGAACCCTTTTCCCTCCTGAACTATCAGATGCTCGCATATCATGGGCCAAAAACGGAGTACTTACAACTGTGGTCGATGATTTCTTTGACGTTGGAGGTTCCGAAGAGGAACTAGTAAACCTTATACAATTGGTTGAGAAGTGGGATGTGAATCCAAGAACCGATTCTTGCTCCGAGAATGTTGAAATCGTTTTTTCAGCAATTAAGAGCTTAGTTAGTGAGATTGGCATCAATGCATTCGCAAGGCAAGAGCGCAGTGTGACAAATCACGTCATTGAGATTTGGTTGGATTTGCTCAAAGCTATGCTGAAGGAAGCTAAGTGGTTGATAAACAAGTCAGCGCCAACAATGGAGGAATACATGGAAAATGCGTACGTCTCATTTGCCTTGGGACCTAATGTCCTTTCAAATCTCTGTTTGGTAGGGCCTAAGCTCTCAGAGGATGCTGTACGGAGTTCGGAATACTACCATCTGTATAGACTAATGAGCACTTTTGGGCGTCTTCTCAATGATATGCAAAGCTATAAGGTAGACAACATCCCCATTATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009899 GO:0009987 GO:0010033 GO:0010333 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016829 GO:0016835 GO:0016838 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

Terpene_synth Terpene_synth_C

Protein Analysis

635

Amino Acids

72.06

Weight (kDa)

5.69

Isoelectric Point (pI)

49.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	170 - 353	4.1e-28	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	433 - 630	5.6e-60	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	471 - 630	2.5e-33	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001708)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79460
fragaria_vesca	FvH4_3g14116 FvH4_3g14130 FvH4_3g14131 FvH4_3g16270
malus_domestica	MD03G1187200.v1.1 MD10G1215700.v1.1 MD10G1215900.v1.1 MD10G1216200.v1.1
prunus_persica	Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128500_v2.0.a1 Prupe.4G128600_v2.0.a1 Prupe.4G128700_v2.0.a1
pyrus_communis	pycom03g13990 pycom10g18220
rosa_chinensis	RchiOBHm_Chr5g0023441 RchiOBHm_Chr5g0023471 RchiOBHm_Chr5g0023641
rosa_laevigata	RLG00000032721
rosa_multiflora	Rmu_co8406553.1_g000001 Rmu_sc0004593.1_g000004 Rmu_sc0005664.1_g000001 Rmu_sc0005664.1_g000005
rosa_roxburghii	Rroxscaffold_1G00055600 Rroxscaffold_1G00055620 Rroxscaffold_1G00055910
rosa_rugosa	Rorug05G0079200 Rorug05G0079300
rosa_samantha	Rh5AG166100 Rh5AG166200 Rh5AG166300 Rh5AG167600 Rh5AG168000 Rh5BG165300 Rh5BG165500 Rh5CG180300 Rh5CG180400 Rh5CG181400 Rh5DG166800 Rh5DG166900 Rh5DG167800
rosa_wichuraiana	Rw0G019600 Rw5G014950 Rw5G014970 Rw5G015110 Rw5G015120 Rw5G015210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	625
AccB1I	GGYRCC	1 cut(s)	815
AccI	GTMKAC	1 cut(s)	1887
AclWI	GGATC	2 cut(s)	394, 681
AcsI	RAATTY	4 cut(s)	70, 997, 1013, 1313
AcuI	CTGAAG	2 cut(s)	267, 1685
AcyI	GRCGYC	1 cut(s)	1855
AfaI	GTAC	7 cut(s)	530, 756, 1102, 1156, 1416, 1730, 1806
AfiI	CCNNNNNNNGG	4 cut(s)	1009, 1069, 1097, 1216
AflII	CTTAAG	2 cut(s)	733, 1082
AhdI	GACNNNNNGTC	1 cut(s)	1754
AhlI	ACTAGT	1 cut(s)	1468
AjiI	CACGTC	1 cut(s)	1627
AjnI	CCWGG	2 cut(s)	378, 1319
AjuI	GAANNNNNNNTTGG	2 cut(s)	1504, 1536
AluBI	AGCT	9 cut(s)	281, 287, 1309, 1330, 1566, 1658, 1673, 1789, 1878
AluI	AGCT	9 cut(s)	281, 287, 1309, 1330, 1566, 1658, 1673, 1789, 1878
Alw21I	GWGCWC	1 cut(s)	1847
Alw26I	GTCTC	2 cut(s)	411, 1738
AlwI	GGATC	2 cut(s)	394, 681
AlwNI	CAGNNNCTG	4 cut(s)	290, 777, 812, 1330
Ama87I	CYCGRG	1 cut(s)	1265
AoxI	GGCC	3 cut(s)	1060, 1401, 1781
ApeKI	GCWGC	5 cut(s)	256, 301, 781, 914, 1352
ApoI	RAATTY	4 cut(s)	70, 997, 1013, 1313
ArsI	GACNNNNNNTTYG	2 cut(s)	860, 892
Asp700I	GAANNNNTTC	2 cut(s)	966, 1519
AspLEI	GCGC	3 cut(s)	626, 1611, 1699
AspS9I	GGNCC	5 cut(s)	58, 146, 1401, 1748, 1781
AsuHPI	GGTGA	2 cut(s)	245, 552
AvaI	CYCGRG	1 cut(s)	1265
AvaII	GGWCC	3 cut(s)	58, 146, 1748
BanI	GGYRCC	1 cut(s)	815
BarI	GAAGNNNNNNTAC	2 cut(s)	1319, 1351
BbsI	GAAGAC	4 cut(s)	873, 1209, 1233, 1850
Bbv12I	GWGCWC	1 cut(s)	1847
BbvI	GCAGC	5 cut(s)	243, 313, 768, 901, 1339
BccI	CCATC	5 cut(s)	128, 313, 511, 571, 1833
BciT130I	CCWGG	2 cut(s)	380, 1321
BciVI	GTATCC	1 cut(s)	215
BcoDI	GTCTC	2 cut(s)	411, 1738
BcuI	ACTAGT	1 cut(s)	1468
BfaI	CTAG	3 cut(s)	971, 1064, 1469
BfmI	CTRYAG	1 cut(s)	782
BfoI	RGCGCY	1 cut(s)	1700
BfrI	CTTAAG	2 cut(s)	733, 1082
BfuI	GTATCC	1 cut(s)	215
BisI	GCNGC	5 cut(s)	257, 302, 782, 915, 1353
BlsI	GCNGC	5 cut(s)	258, 303, 783, 916, 1354
BmcAI	AGTACT	1 cut(s)	1416
Bme1390I	CCNGG	2 cut(s)	380, 1321
Bme18I	GGWCC	3 cut(s)	58, 146, 1748
BmeRI	GACNNNNNGTC	1 cut(s)	1754
BmeT110I	CYCGRG	1 cut(s)	1265
BmgBI	CACGTC	1 cut(s)	1627
BmgT120I	GGNCC	5 cut(s)	58, 146, 1401, 1748, 1781
BmiI	GGNNCC	7 cut(s)	60, 84, 147, 817, 1360, 1456, 1749
BmrFI	CCNGG	2 cut(s)	380, 1321
BpiI	GAAGAC	4 cut(s)	873, 1209, 1233, 1850
Bpu10I	CCTNAGC	1 cut(s)	1785
Bsa29I	ATCGAT	1 cut(s)	1247
BsaAI	YACGTR	1 cut(s)	1239
BsaBI	GATNNNNATC	2 cut(s)	1506, 1583
BsaHI	GRCGYC	1 cut(s)	1855
BsaJI	CCNNGG	5 cut(s)	195, 378, 379, 886, 1743
BsaXI	ACNNNNNCTCC	2 cut(s)	217, 247
Bsc4I	CCNNNNNNNGG	4 cut(s)	1009, 1069, 1097, 1216
Bse1I	ACTGG	4 cut(s)	113, 762, 992, 1221
Bse3DI	GCAATG	4 cut(s)	60, 227, 360, 1137
Bse8I	GATNNNNATC	2 cut(s)	1506, 1583
BseBI	CCWGG	2 cut(s)	380, 1321
BseCI	ATCGAT	1 cut(s)	1247
BseDI	CCNNGG	5 cut(s)	195, 378, 379, 886, 1743
BseGI	GGATG	8 cut(s)	160, 188, 766, 796, 952, 1507, 1804, 1893
BseJI	GATNNNNATC	2 cut(s)	1506, 1583
BseLI	CCNNNNNNNGG	4 cut(s)	1009, 1069, 1097, 1216
BseMI	GCAATG	4 cut(s)	60, 227, 360, 1137
BseMII	CTCAG	2 cut(s)	1046, 1806
BseNI	ACTGG	4 cut(s)	113, 762, 992, 1221
BseXI	GCAGC	5 cut(s)	243, 313, 768, 901, 1339
BshFI	GGCC	3 cut(s)	1062, 1403, 1783
BshNI	GGYRCC	1 cut(s)	815
BshVI	ATCGAT	1 cut(s)	1247
BsiHKAI	GWGCWC	1 cut(s)	1847
BsiHKCI	CYCGRG	1 cut(s)	1265
BsiWI	CGTACG	1 cut(s)	1728
BslFI	GGGAC	3 cut(s)	44, 917, 1761
BslI	CCNNNNNNNGG	4 cut(s)	1009, 1069, 1097, 1216
BsmAI	GTCTC	2 cut(s)	411, 1738
BsmBI	CGTCTC	1 cut(s)	1738
BsmFI	GGGAC	3 cut(s)	44, 917, 1761
BsmI	GAATGC	3 cut(s)	104, 652, 1592
BsnI	GGCC	3 cut(s)	1062, 1403, 1783
BsoBI	CYCGRG	1 cut(s)	1265
Bsp1286I	GDGCHC	1 cut(s)	1847
Bsp143I	GATC	4 cut(s)	16, 386, 673, 724
BspANI	GGCC	3 cut(s)	1062, 1403, 1783
BspCNI	CTCAG	2 cut(s)	1045, 1805
BspDI	ATCGAT	1 cut(s)	1247
BspHI	TCATGA	2 cut(s)	130, 522
BspLI	GGNNCC	7 cut(s)	60, 84, 147, 817, 1360, 1456, 1749
BspMAI	CTGCAG	1 cut(s)	786
BspPI	GGATC	2 cut(s)	394, 681
BspQI	GCTCTTC	1 cut(s)	291
BspT107I	GGYRCC	1 cut(s)	815
BspTI	CTTAAG	2 cut(s)	733, 1082
BsrDI	GCAATG	4 cut(s)	60, 227, 360, 1137
BsrI	ACTGG	4 cut(s)	113, 762, 992, 1221
BssECI	CCNNGG	5 cut(s)	195, 378, 379, 886, 1743
BssMI	GATC	4 cut(s)	16, 386, 673, 724
BssNI	GRCGYC	1 cut(s)	1855
BssT1I	CCWWGG	3 cut(s)	195, 886, 1743
Bst2UI	CCWGG	2 cut(s)	380, 1321
Bst4CI	ACNGT	4 cut(s)	661, 927, 1340, 1426
Bst6I	CTCTTC	2 cut(s)	291, 1455
BstACI	GRCGYC	1 cut(s)	1855
BstAFI	CTTAAG	2 cut(s)	733, 1082
BstBAI	YACGTR	1 cut(s)	1239
BstC8I	GCNNGC	4 cut(s)	779, 814, 1332, 1390
BstDEI	CTNAG	8 cut(s)	277, 451, 899, 1032, 1567, 1674, 1785, 1792
BstENI	CCTNNNNNAGG	1 cut(s)	1007
BstF5I	GGATG	8 cut(s)	160, 188, 766, 796, 952, 1507, 1804, 1893
BstH2I	RGCGCY	1 cut(s)	1700
BstHHI	GCGC	3 cut(s)	626, 1611, 1699
BstKTI	GATC	4 cut(s)	19, 389, 676, 727
BstMAI	GTCTC	2 cut(s)	411, 1738
BstMBI	GATC	4 cut(s)	16, 386, 673, 724
BstMWI	GCNNNNNNNGC	3 cut(s)	50, 307, 473
BstNI	CCWGG	2 cut(s)	380, 1321
BstNSI	RCATGY	1 cut(s)	204
BstSCI	CCNGG	2 cut(s)	378, 1319
BstSFI	CTRYAG	1 cut(s)	782
BstV1I	GCAGC	5 cut(s)	243, 313, 768, 901, 1339
BstV2I	GAAGAC	4 cut(s)	873, 1209, 1233, 1850
BstXI	CCANNNNNNTGG	1 cut(s)	878
Bsu15I	ATCGAT	1 cut(s)	1247
BsuI	GTATCC	1 cut(s)	215
BsuRI	GGCC	3 cut(s)	1062, 1403, 1783
BsuTUI	ATCGAT	1 cut(s)	1247
BtgZI	GCGATG	1 cut(s)	291
BtrI	CACGTC	1 cut(s)	1627
BtsCI	GGATG	8 cut(s)	160, 188, 766, 796, 952, 1507, 1804, 1893
BtsI	GCAGTG	4 cut(s)	39, 1227, 1347, 1618
BtsIMutI	CAGTG	5 cut(s)	39, 906, 1227, 1347, 1618
Cac8I	GCNNGC	4 cut(s)	779, 814, 1332, 1390
CaiI	CAGNNNCTG	4 cut(s)	290, 777, 812, 1330
CciI	TCATGA	2 cut(s)	130, 522
CfoI	GCGC	3 cut(s)	626, 1611, 1699
Cfr13I	GGNCC	5 cut(s)	58, 146, 1401, 1748, 1781
ClaI	ATCGAT	1 cut(s)	1247
CseI	GACGC	1 cut(s)	1844
Csp6I	GTAC	7 cut(s)	529, 755, 1101, 1155, 1415, 1729, 1805
CviAII	CATG	6 cut(s)	131, 141, 201, 523, 1398, 1717
CviQI	GTAC	7 cut(s)	529, 755, 1101, 1155, 1415, 1729, 1805
DdeI	CTNAG	8 cut(s)	277, 451, 899, 1032, 1567, 1674, 1785, 1792
DpnI	GATC	4 cut(s)	18, 388, 675, 726
DpnII	GATC	4 cut(s)	16, 386, 673, 724
DraI	TTTAAA	2 cut(s)	430, 1167
DriI	GACNNNNNGTC	1 cut(s)	1754
Eam1104I	CTCTTC	2 cut(s)	291, 1455
Eam1105I	GACNNNNNGTC	1 cut(s)	1754
EarI	CTCTTC	2 cut(s)	291, 1455
Eco130I	CCWWGG	3 cut(s)	195, 886, 1743
Eco32I	GATATC	2 cut(s)	896, 1137
Eco47I	GGWCC	3 cut(s)	58, 146, 1748
Eco57I	CTGAAG	2 cut(s)	267, 1685
Eco88I	CYCGRG	1 cut(s)	1265
EcoNI	CCTNNNNNAGG	1 cut(s)	1007
EcoO109I	RGGNCCY	3 cut(s)	146, 1748, 1781
EcoRII	CCWGG	2 cut(s)	378, 1319
EcoRV	GATATC	2 cut(s)	896, 1137
EcoT14I	CCWWGG	3 cut(s)	195, 886, 1743
EcoT22I	ATGCAT	1 cut(s)	1594
ErhI	CCWWGG	3 cut(s)	195, 886, 1743
Esp3I	CGTCTC	1 cut(s)	1738
FaeI	CATG	6 cut(s)	134, 144, 204, 526, 1401, 1720
FaqI	GGGAC	3 cut(s)	44, 917, 1761
FatI	CATG	6 cut(s)	130, 140, 200, 522, 1397, 1716
FauNDI	CATATG	1 cut(s)	34
FblI	GTMKAC	1 cut(s)	1887
Fnu4HI	GCNGC	5 cut(s)	257, 302, 782, 915, 1353
FokI	GGATG	8 cut(s)	147, 175, 773, 803, 939, 1514, 1811, 1880
Fsp4HI	GCNGC	5 cut(s)	257, 302, 782, 915, 1353
FspAI	RTGCGCAY	1 cut(s)	625
FspBI	CTAG	3 cut(s)	971, 1064, 1469
FspI	TGCGCA	1 cut(s)	625
GlaI	GCGC	3 cut(s)	625, 1610, 1698
GluI	GCNGC	5 cut(s)	257, 302, 782, 915, 1353
HaeII	RGCGCY	1 cut(s)	1700
HaeIII	GGCC	3 cut(s)	1062, 1403, 1783
HgaI	GACGC	1 cut(s)	1844
HhaI	GCGC	3 cut(s)	626, 1611, 1699
Hin1I	GRCGYC	1 cut(s)	1855
Hin1II	CATG	6 cut(s)	134, 144, 204, 526, 1401, 1720
Hin6I	GCGC	3 cut(s)	624, 1609, 1697
HinP1I	GCGC	3 cut(s)	624, 1609, 1697
HincII	GTYRAC	1 cut(s)	171
HindII	GTYRAC	1 cut(s)	171
HinfI	GANTC	7 cut(s)	269, 347, 837, 962, 1044, 1507, 1520
HpaI	GTTAAC	1 cut(s)	171
HphI	GGTGA	2 cut(s)	245, 552
Hpy166II	GTNNAC	5 cut(s)	106, 171, 755, 1474, 1888
Hpy8I	GTNNAC	5 cut(s)	106, 171, 755, 1474, 1888
HpyAV	CCTTC	4 cut(s)	72, 482, 1101, 1660
HpyCH4III	ACNGT	4 cut(s)	661, 927, 1340, 1426
HpyCH4IV	ACGT	4 cut(s)	1238, 1446, 1626, 1731
HpyCH4V	TGCA	9 cut(s)	160, 212, 259, 353, 650, 784, 917, 1592, 1873
HpyF10VI	GCNNNNNNNGC	3 cut(s)	50, 307, 473
HpyF3I	CTNAG	8 cut(s)	277, 451, 899, 1032, 1567, 1674, 1785, 1792
HpySE526I	ACGT	4 cut(s)	1238, 1446, 1626, 1731
Hsp92I	GRCGYC	1 cut(s)	1855
Hsp92II	CATG	6 cut(s)	134, 144, 204, 526, 1401, 1720
HspAI	GCGC	3 cut(s)	624, 1609, 1697
KspAI	GTTAAC	1 cut(s)	171
Kzo9I	GATC	4 cut(s)	16, 386, 673, 724
LguI	GCTCTTC	1 cut(s)	291
LmnI	GCTCC	2 cut(s)	82, 1532
Lsp1109I	GCAGC	5 cut(s)	243, 313, 768, 901, 1339
MaeI	CTAG	3 cut(s)	971, 1064, 1469
MaeII	ACGT	4 cut(s)	1238, 1446, 1626, 1731
MaeIII	GTNAC	2 cut(s)	501, 1615
MalI	GATC	4 cut(s)	18, 388, 675, 726
MboI	GATC	4 cut(s)	16, 386, 673, 724
MfeI	CAATTG	1 cut(s)	1484
MhlI	GDGCHC	1 cut(s)	1847
MlyI	GAGTC	2 cut(s)	278, 831
MmeI	TCCRAC	3 cut(s)	680, 1429, 1623
Mph1103I	ATGCAT	1 cut(s)	1594
MroXI	GAANNNNTTC	2 cut(s)	966, 1519
MslI	CAYNNNNRTG	2 cut(s)	772, 957
MspCI	CTTAAG	2 cut(s)	733, 1082
MspR9I	CCNGG	2 cut(s)	380, 1321
MunI	CAATTG	1 cut(s)	1484
Mva1269I	GAATGC	3 cut(s)	104, 652, 1592
MvaI	CCWGG	2 cut(s)	380, 1321
MwoI	GCNNNNNNNGC	3 cut(s)	50, 307, 473
NdeI	CATATG	1 cut(s)	34
NdeII	GATC	4 cut(s)	16, 386, 673, 724
NlaIII	CATG	6 cut(s)	134, 144, 204, 526, 1401, 1720
NlaIV	GGNNCC	7 cut(s)	60, 84, 147, 817, 1360, 1456, 1749
NmuCI	GTSAC	2 cut(s)	501, 1615
NsbI	TGCGCA	1 cut(s)	625
NsiI	ATGCAT	1 cut(s)	1594
NspI	RCATGY	1 cut(s)	204
PaeR7I	CTCGAG	1 cut(s)	1265
PagI	TCATGA	2 cut(s)	130, 522
PasI	CCCWGGG	1 cut(s)	379
PciSI	GCTCTTC	1 cut(s)	291
PcsI	WCGNNNNNNNCGW	1 cut(s)	1244
PctI	GAATGC	3 cut(s)	104, 652, 1592
PdmI	GAANNNNTTC	2 cut(s)	966, 1519
PfeI	GAWTC	5 cut(s)	347, 962, 1044, 1507, 1520
Pfl23II	CGTACG	1 cut(s)	1728
PkrI	GCNGC	5 cut(s)	258, 303, 783, 916, 1354
PleI	GAGTC	2 cut(s)	277, 831
PpsI	GAGTC	2 cut(s)	277, 831
Ppu21I	YACGTR	1 cut(s)	1239
PpuMI	RGGWCCY	2 cut(s)	146, 1748
Psp5II	RGGWCCY	2 cut(s)	146, 1748
Psp6I	CCWGG	2 cut(s)	378, 1319
PspGI	CCWGG	2 cut(s)	378, 1319
PspLI	CGTACG	1 cut(s)	1728
PspN4I	GGNNCC	7 cut(s)	60, 84, 147, 817, 1360, 1456, 1749
PspPI	GGNCC	5 cut(s)	58, 146, 1401, 1748, 1781
PspPPI	RGGWCCY	2 cut(s)	146, 1748
PspXI	VCTCGAGB	1 cut(s)	1265
PstI	CTGCAG	1 cut(s)	786
PstNI	CAGNNNCTG	4 cut(s)	290, 777, 812, 1330
RsaI	GTAC	7 cut(s)	530, 756, 1102, 1156, 1416, 1730, 1806
RsaNI	GTAC	7 cut(s)	529, 755, 1101, 1155, 1415, 1729, 1805
RseI	CAYNNNNRTG	2 cut(s)	772, 957
SapI	GCTCTTC	1 cut(s)	291
SatI	GCNGC	5 cut(s)	257, 302, 782, 915, 1353
Sau3AI	GATC	4 cut(s)	16, 386, 673, 724
Sau96I	GGNCC	5 cut(s)	58, 146, 1401, 1748, 1781
ScaI	AGTACT	1 cut(s)	1416
SchI	GAGTC	2 cut(s)	278, 831
ScrFI	CCNGG	2 cut(s)	380, 1321
SduI	GDGCHC	1 cut(s)	1847
SfcI	CTRYAG	1 cut(s)	782
Sfr274I	CTCGAG	1 cut(s)	1265
SinI	GGWCC	3 cut(s)	58, 146, 1748
SlaI	CTCGAG	1 cut(s)	1265
SmiMI	CAYNNNNRTG	2 cut(s)	772, 957
SmlI	CTYRAG	3 cut(s)	733, 1082, 1265
SmoI	CTYRAG	3 cut(s)	733, 1082, 1265
SpeI	ACTAGT	1 cut(s)	1468
SspI	AATATT	2 cut(s)	330, 1192
SspMI	CTAG	3 cut(s)	971, 1064, 1469
StyD4I	CCNGG	2 cut(s)	378, 1319
StyI	CCWWGG	3 cut(s)	195, 886, 1743
TaaI	ACNGT	4 cut(s)	661, 927, 1340, 1426
TaiI	ACGT	4 cut(s)	1241, 1449, 1629, 1734
TaqI	TCGA	8 cut(s)	267, 727, 835, 1118, 1247, 1266, 1290, 1431
TatI	WGTACW	3 cut(s)	754, 1154, 1414
TfiI	GAWTC	5 cut(s)	347, 962, 1044, 1507, 1520
TscAI	CASTG	5 cut(s)	46, 913, 1227, 1354, 1618
TseFI	GTSAC	2 cut(s)	501, 1615
TseI	GCWGC	5 cut(s)	256, 301, 781, 914, 1352
Tsp45I	GTSAC	2 cut(s)	501, 1615
TspDTI	ATGAA	8 cut(s)	119, 309, 539, 777, 807, 941, 975, 1215
TspGWI	ACGGA	2 cut(s)	1425, 1822
TspRI	CASTG	5 cut(s)	46, 913, 1227, 1354, 1618
Vha464I	CTTAAG	2 cut(s)	733, 1082
VpaK11BI	GGWCC	3 cut(s)	58, 146, 1748
XagI	CCTNNNNNAGG	1 cut(s)	1007
XapI	RAATTY	4 cut(s)	70, 997, 1013, 1313
XbaI	TCTAGA	1 cut(s)	970
XceI	RCATGY	1 cut(s)	204
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1327
XhoI	CTCGAG	1 cut(s)	1265
XmiI	GTMKAC	1 cut(s)	1887
XmnI	GAANNNNTTC	2 cut(s)	966, 1519
XspI	CTAG	3 cut(s)	971, 1064, 1469
ZrmI	AGTACT	1 cut(s)	1416
Zsp2I	ATGCAT	1 cut(s)	1594

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.