FvH4_3g19720

MATE efflux family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000715
Physical Location & Seq
Reverse (-)
12901149 .. 12904539
3391 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g19720.t1

Sequence Viewer

Length: 1827 bp
ATGAGTTGTGTTCTTATTTCTGGTGATCGTGTGCTCTTACTTACTTGTAGGCCTGTGTTTAGAACCCGTCCCACATCATTCTCTGGTGAGAGCGTGGTAGTTTCCACGGCTCAAAGCAGGCTTGATCGGACAGGTTCTAAAATGGAGGGTCCTTATAGCAACATGGAGGAATTCAAGTTAATGATTCAACTACTAGAAAAACGTATCAATCGCATCGAAACTCTAAGCCAAGGAGGTAAGGGCTGCCACGGGGAAAGAGACGTTTATCAACGTGTCATTTGCATGGAAACATCGTGCACAGACGGTGAGGGTTCTGAAGGGGAGGGTGACGTTGGCCCTTTCCATCAATGTGTTCCTTTGTGTGAATTGGACGAAATGGTGGAATTAGTTTCGACTATGAAGGCAGGTTGCAAAGAAGAAGGAGAAGAAAGTTCACCAGGAACATGTTGTAAGAACCTATTAGACATTGAGGAGGCCAAGATACAGATATTGTTTTCGTTGCCAGCAATTCTCACCAATTTATTCTTCTCCTTGATCACATTGGTGTCTGTCATGTTTGCTGGCCATCTTGGTGAGCTTCAGTTAGCTGGTGCAGCCTTGGCTAATTCGTGGGGAAATGTTACAGGTTTTGCATTTGTGGTTGGATTAAGTGGAGCTCTTGAGACACTTTGTGGGCAAGGGTTTGGTTCAAAGTCATATAGAACGTTGGGGATTTATCTGCAAGCTTCTTGTATCATATCTCTTCCGTTCTGCTCCATCATATCTGTAGTATGGTTGTATACAGAACCAATACTTATTCTACTCCATCAAGATCCTGAAATTGCAAAATCCGCAGCTCTTTTCTTAAAATATCTGATTCCCGGATTATTTGCATATGGCCTCTTGCAAAATATCTTGAGATTTCTTCAGACTCAATCCGTATATGTCATGCCAATGGTCTTCTCCATGATCTCCATTGTACTTCATATTGCAATAACTTATGGTTTGGTACATTGGACATCTCTTGGTTTTAAGGGAGCTCCACTAGCTGCGTCAGTTTCGCTTTGGATATCGGTTCTTATGTTGGCCTTCTATGTTAGCCGTGCAAAGAATTTTGAGCATACGTGGGAAGGATTTTCATTAGAATCATTCAAATATATCATGACTGGTTTGGACCTTGCTCTTCCCTCCGCAACAATGGAATGTTTGGAGGAGGGGGCTTTCGAGATCATTGTGTTTATGGGAGGATTGATGCCAAACTCAACAAGAACCACTTCATTACTTGCAATGTGTGTGAACACACAAGAAATTGGTTACATGGTTACATATGGCCTCAGCGCTGCTGCTAGTACAAGGGTGTCAAATGAATTAGGGGCAGGCAACTCGGATCAAGCAAAGAATGCGATGCTTGTGACTCTTAAGCTCTCGCTGATTCTTTCTTTTACAATTGTTCTGATTTTGACATTTGGTCACAATACCTGGGCAGGCTTCTTCATTGACAGCTCTTCAAATTATGCAGTACTAATAGAGGACTTTGCTTCTATGACACCACTTCTTGCAATTTCAATAGTTCTTGATTCCTTGCAAGGTGTCTTTTCAGGTGTGGCAAGAGGATGTGGGTGGCAACACTTGGCTGTGTATGTGAACTTGGGCACATTTTATATTATTGGCATGACAATTGCTGGTCTTCTTGGATTTGTGTTGAAACTTTATGCCAAGGGCTTGTGGACTGGTTTAATCTGTGGTCTCTTCTTCCAAGCAAGCACACTATTGTTGATTACACAGCTCAAGAAATGGACATCTGATTTCCAGTACGTCAAAGCATCTTCACAAAGCAGTGAAATCTGA

Protein Analysis

609

Amino Acids

66.24

Weight (kDa)

5.34

Isoelectric Point (pI)

36.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 168 - 327 9.4e-33 MatE
MatE PF01554 389 - 553 5.1e-21 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000715)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G23550 AT3G23560 AT3G23560
fragaria_vesca FvH4_1g15630 FvH4_1g15630 FvH4_3g19700 FvH4_3g19700 FvH4_3g19700 FvH4_3g19700 FvH4_3g19700 FvH4_3g19720 FvH4_3g20060 FvH4_3g20060 FvH4_3g20060 FvH4_3g20060 FvH4_5g31740 FvH4_7g19991
malus_domestica MD03G1230300.v1.1 MD11G1250700.v1.1 MD11G1251300.v1.1 MD11G1251400.v1.1 MD11G1251500.v1.1 MD12G1088700.v1.1
prunus_persica Prupe.4G177700_v2.0.a1 Prupe.4G177700_v2.0.a1 Prupe.4G177900_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178900_v2.0.a1 Prupe.4G178900_v2.0.a1 Prupe.4G178900_v2.0.a1 Prupe.4G206700_v2.0.a1
pyrus_communis pycom03g17780 pycom10g06980 pycom11g22170 pycom11g22270
rosa_chinensis RchiOBHm_Chr5g0033011 RchiOBHm_Chr5g0033061
rosa_laevigata RLG00000033443 RLG00000033445
rosa_multiflora Rmu_sc0000986.1_g000015
rosa_roxburghii Rroxscaffold_1G00046880 Rroxscaffold_1G00046890 Rroxscaffold_1G00046990 Rroxscaffold_1G00047000 Rroxscaffold_1G00047040
rosa_rugosa Rorug05G0135000 Rorug05G0135100 Rorug05G0135200 Rorug05G0135500 Rorug05G0135600 Rorug05G0135700 Rorug05G0135800
rosa_samantha Rh5AG227700 Rh5AG228200 Rh5BG229300 Rh5BG229400 Rh5CG256700 Rh5CG257200 Rh5DG233900 Rh5DG234100
rosa_wichuraiana Rw5G020860 Rw5G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 395
AccI GTMKAC 1 cut(s) 779
AciI CCGC 2 cut(s) 831, 1170
AclI AACGTT 1 cut(s) 704
AclWI GGATC 2 cut(s) 806, 1374
AcoI YGGCCR 1 cut(s) 562
AcsI RAATTY 2 cut(s) 170, 1090
AcuI CTGAAG 3 cut(s) 336, 563, 890
AdeI CACNNNGTG 1 cut(s) 671
AfaI GTAC 5 cut(s) 960, 990, 1330, 1500, 1793
AfeI AGCGCT 1 cut(s) 1318
AflII CTTAAG 1 cut(s) 1397
AflIII ACRYGT 2 cut(s) 271, 443
AgsI TTSAA 7 cut(s) 175, 188, 690, 1132, 1488, 1545, 1684
AhdI GACNNNNNGTC 1 cut(s) 1446
AjnI CCWGG 2 cut(s) 436, 1457
AjuI GAANNNNNNNTTGG 2 cut(s) 509, 541
AleI CACNNNNGTG 1 cut(s) 542
Alw21I GWGCWC 4 cut(s) 36, 299, 658, 1021
Alw26I GTCTC 3 cut(s) 252, 656, 1730
Alw44I GTGCAC 1 cut(s) 295
AlwI GGATC 2 cut(s) 806, 1374
Aor51HI AGCGCT 1 cut(s) 1318
AoxI GGCC 7 cut(s) 50, 334, 474, 562, 877, 1065, 1309
ApaLI GTGCAC 1 cut(s) 295
ApeKI GCWGC 6 cut(s) 243, 593, 833, 1028, 1319, 1322
ApoI RAATTY 2 cut(s) 170, 1090
Asp700I GAANNNNTTC 1 cut(s) 1252
AspLEI GCGC 1 cut(s) 1319
AspS9I GGNCC 3 cut(s) 149, 335, 1153
AsuC2I CCSGG 1 cut(s) 861
AsuHPI GGTGA 7 cut(s) 35, 98, 317, 338, 426, 505, 584
AvaII GGWCC 2 cut(s) 149, 1153
BaeGI GKGCMC 2 cut(s) 299, 1634
BalI TGGCCA 1 cut(s) 564
BanII GRGCYC 2 cut(s) 658, 1021
BbsI GAAGAC 2 cut(s) 931, 1658
Bbv12I GWGCWC 4 cut(s) 36, 299, 658, 1021
BbvCI CCTCAGC 1 cut(s) 1313
BbvI GCAGC 6 cut(s) 230, 605, 845, 1015, 1306, 1309
BccI CCATC 4 cut(s) 351, 573, 764, 813
BceAI ACGGC 2 cut(s) 123, 1065
BcgI CGANNNNNNTGC 2 cut(s) 1344, 1378
BciT130I CCWGG 2 cut(s) 438, 1459
BclI TGATCA 1 cut(s) 534
BcnI CCSGG 1 cut(s) 861
BcoDI GTCTC 3 cut(s) 252, 656, 1730
BfaI CTAG 3 cut(s) 194, 1025, 1326
BfmI CTRYAG 1 cut(s) 765
BfoI RGCGCY 1 cut(s) 1320
BfrI CTTAAG 1 cut(s) 1397
BfuAI ACCTGC 1 cut(s) 395
BisI GCNGC 6 cut(s) 244, 594, 834, 1029, 1320, 1323
BlsI GCNGC 6 cut(s) 245, 595, 835, 1030, 1321, 1324
BmcAI AGTACT 1 cut(s) 1500
Bme1390I CCNGG 3 cut(s) 438, 861, 1459
Bme18I GGWCC 2 cut(s) 149, 1153
BmeRI GACNNNNNGTC 1 cut(s) 1446
BmgT120I GGNCC 3 cut(s) 149, 335, 1153
BmiI GGNNCC 1 cut(s) 150
BmrFI CCNGG 3 cut(s) 438, 861, 1459
BmsI GCATC 4 cut(s) 222, 1221, 1374, 1811
BpiI GAAGAC 2 cut(s) 931, 1658
Bpu10I CCTNAGC 1 cut(s) 1313
BpuEI CTTGAG 3 cut(s) 680, 916, 1751
BpuMI CCSGG 1 cut(s) 861
BsaAI YACGTR 1 cut(s) 1104
BsaI GGTCTC 1 cut(s) 1730
BsaJI CCNNGG 6 cut(s) 105, 229, 247, 597, 1458, 1695
Bse1I ACTGG 3 cut(s) 1150, 1714, 1789
Bse3DI GCAATG 1 cut(s) 1272
BseBI CCWGG 2 cut(s) 438, 1459
BseDI CCNNGG 6 cut(s) 105, 229, 247, 597, 1458, 1695
BseGI GGATG 1 cut(s) 1598
BseMI GCAATG 1 cut(s) 1272
BseMII CTCAG 1 cut(s) 1327
BseNI ACTGG 3 cut(s) 1150, 1714, 1789
BseRI GAGGAG 2 cut(s) 485, 1205
BseSI GKGCMC 2 cut(s) 299, 1634
BseXI GCAGC 6 cut(s) 230, 605, 845, 1015, 1306, 1309
BsgI GTGCAG 1 cut(s) 612
BshFI GGCC 7 cut(s) 52, 336, 476, 564, 879, 1067, 1311
BsiHKAI GWGCWC 4 cut(s) 36, 299, 658, 1021
BsiSI CCGG 1 cut(s) 861
BslFI GGGAC 1 cut(s) 54
BsmAI GTCTC 3 cut(s) 252, 656, 1730
BsmBI CGTCTC 1 cut(s) 252
BsmFI GGGAC 1 cut(s) 54
BsmI GAATGC 1 cut(s) 1384
BsnI GGCC 7 cut(s) 52, 336, 476, 564, 879, 1067, 1311
Bso31I GGTCTC 1 cut(s) 1730
Bsp1286I GDGCHC 5 cut(s) 36, 299, 658, 1021, 1634
Bsp143I GATC 7 cut(s) 25, 124, 534, 811, 948, 1206, 1366
BspACI CCGC 2 cut(s) 831, 1170
BspANI GGCC 7 cut(s) 52, 336, 476, 564, 879, 1067, 1311
BspCNI CTCAG 1 cut(s) 1326
BspHI TCATGA 1 cut(s) 1140
BspLI GGNNCC 1 cut(s) 150
BspMI ACCTGC 1 cut(s) 395
BspPI GGATC 2 cut(s) 806, 1374
BspQI GCTCTTC 2 cut(s) 1167, 1489
BspTI CTTAAG 1 cut(s) 1397
BspTNI GGTCTC 1 cut(s) 1730
BsrDI GCAATG 1 cut(s) 1272
BsrI ACTGG 3 cut(s) 1150, 1714, 1789
BssECI CCNNGG 6 cut(s) 105, 229, 247, 597, 1458, 1695
BssMI GATC 7 cut(s) 25, 124, 534, 811, 948, 1206, 1366
BssNAI GTATAC 1 cut(s) 780
BssT1I CCWWGG 3 cut(s) 229, 597, 1695
Bst1107I GTATAC 1 cut(s) 780
Bst2UI CCWGG 2 cut(s) 438, 1459
Bst4CI ACNGT 1 cut(s) 305
Bst6I CTCTTC 4 cut(s) 747, 1167, 1489, 1733
BstAFI CTTAAG 1 cut(s) 1397
BstAPI GCANNNNNTGC 1 cut(s) 1379
BstBAI YACGTR 1 cut(s) 1104
BstC8I GCNNGC 7 cut(s) 119, 504, 562, 723, 1357, 1465, 1741
BstDEI CTNAG 2 cut(s) 224, 1313
BstDSI CCRYGG 2 cut(s) 105, 247
BstF5I GGATG 1 cut(s) 1598
BstH2I RGCGCY 1 cut(s) 1320
BstHHI GCGC 1 cut(s) 1319
BstKTI GATC 7 cut(s) 28, 127, 537, 814, 951, 1209, 1369
BstMAI GTCTC 3 cut(s) 252, 656, 1730
BstMBI GATC 7 cut(s) 25, 124, 534, 811, 948, 1206, 1366
BstMWI GCNNNNNNNGC 5 cut(s) 593, 599, 830, 1025, 1379
BstNI CCWGG 2 cut(s) 438, 1459
BstNSI RCATGY 1 cut(s) 447
BstSCI CCNGG 3 cut(s) 436, 859, 1457
BstSFI CTRYAG 1 cut(s) 765
BstSLI GKGCMC 2 cut(s) 299, 1634
BstV1I GCAGC 6 cut(s) 230, 605, 845, 1015, 1306, 1309
BstV2I GAAGAC 2 cut(s) 931, 1658
BstX2I RGATCY 1 cut(s) 811
BstYI RGATCY 1 cut(s) 811
BstZ17I GTATAC 1 cut(s) 780
BsuRI GGCC 7 cut(s) 52, 336, 476, 564, 879, 1067, 1311
BtgI CCRYGG 2 cut(s) 105, 247
BtgZI GCGATG 1 cut(s) 1397
BtsCI GGATG 1 cut(s) 1598
BtsI GCAGTG 1 cut(s) 1822
BtsIMutI CAGTG 1 cut(s) 1822
BveI ACCTGC 1 cut(s) 395
Cac8I GCNNGC 7 cut(s) 119, 504, 562, 723, 1357, 1465, 1741
CciI TCATGA 1 cut(s) 1140
CfoI GCGC 1 cut(s) 1319
Cfr13I GGNCC 3 cut(s) 149, 335, 1153
CseI GACGC 1 cut(s) 1020
Csp6I GTAC 5 cut(s) 959, 989, 1329, 1499, 1792
CviAII CATG 9 cut(s) 163, 283, 444, 553, 928, 946, 1141, 1297, 1651
CviQI GTAC 5 cut(s) 959, 989, 1329, 1499, 1792
DdeI CTNAG 2 cut(s) 224, 1313
DpnI GATC 7 cut(s) 27, 126, 536, 813, 950, 1208, 1368
DpnII GATC 7 cut(s) 25, 124, 534, 811, 948, 1206, 1366
DraIII CACNNNGTG 1 cut(s) 671
DriI GACNNNNNGTC 1 cut(s) 1446
EaeI YGGCCR 1 cut(s) 562
Eam1104I CTCTTC 4 cut(s) 747, 1167, 1489, 1733
Eam1105I GACNNNNNGTC 1 cut(s) 1446
EarI CTCTTC 4 cut(s) 747, 1167, 1489, 1733
Ecl136II GAGCTC 2 cut(s) 656, 1019
Eco130I CCWWGG 3 cut(s) 229, 597, 1695
Eco147I AGGCCT 1 cut(s) 52
Eco24I GRGCYC 2 cut(s) 658, 1021
Eco31I GGTCTC 1 cut(s) 1730
Eco32I GATATC 1 cut(s) 1050
Eco47I GGWCC 2 cut(s) 149, 1153
Eco47III AGCGCT 1 cut(s) 1318
Eco53kI GAGCTC 2 cut(s) 656, 1019
Eco57I CTGAAG 3 cut(s) 336, 563, 890
EcoICRI GAGCTC 2 cut(s) 656, 1019
EcoO109I RGGNCCY 1 cut(s) 149
EcoRI GAATTC 1 cut(s) 170
EcoRII CCWGG 2 cut(s) 436, 1457
EcoRV GATATC 1 cut(s) 1050
EcoT14I CCWWGG 3 cut(s) 229, 597, 1695
EcoT38I GRGCYC 2 cut(s) 658, 1021
ErhI CCWWGG 3 cut(s) 229, 597, 1695
Esp3I CGTCTC 1 cut(s) 252
FaeI CATG 9 cut(s) 166, 286, 447, 556, 931, 949, 1144, 1300, 1654
FalI AAGNNNNNCTT 2 cut(s) 1237, 1269
FaqI GGGAC 1 cut(s) 54
FatI CATG 9 cut(s) 162, 282, 443, 552, 927, 945, 1140, 1296, 1650
FauNDI CATATG 2 cut(s) 874, 1306
FbaI TGATCA 1 cut(s) 534
FblI GTMKAC 1 cut(s) 779
Fnu4HI GCNGC 6 cut(s) 244, 594, 834, 1029, 1320, 1323
FokI GGATG 1 cut(s) 1605
FriOI GRGCYC 2 cut(s) 658, 1021
Fsp4HI GCNGC 6 cut(s) 244, 594, 834, 1029, 1320, 1323
FspBI CTAG 3 cut(s) 194, 1025, 1326
GlaI GCGC 1 cut(s) 1318
GluI GCNGC 6 cut(s) 244, 594, 834, 1029, 1320, 1323
HaeII RGCGCY 1 cut(s) 1320
HaeIII GGCC 7 cut(s) 52, 336, 476, 564, 879, 1067, 1311
HapII CCGG 1 cut(s) 861
HgaI GACGC 1 cut(s) 1020
HhaI GCGC 1 cut(s) 1319
Hin1II CATG 9 cut(s) 166, 286, 447, 556, 931, 949, 1144, 1300, 1654
Hin6I GCGC 1 cut(s) 1317
HinP1I GCGC 1 cut(s) 1317
HindIII AAGCTT 1 cut(s) 723
HinfI GANTC 7 cut(s) 184, 856, 910, 1124, 1393, 1411, 1556
HpaII CCGG 1 cut(s) 861
HphI GGTGA 7 cut(s) 35, 98, 317, 338, 426, 505, 584
Hpy166II GTNNAC 6 cut(s) 297, 434, 780, 1276, 1624, 1707
Hpy188I TCNGA 8 cut(s) 129, 316, 855, 909, 1366, 1434, 1783, 1826
Hpy188III TCNNGA 8 cut(s) 659, 809, 815, 895, 1141, 1204, 1553, 1768
Hpy8I GTNNAC 6 cut(s) 297, 434, 780, 1276, 1624, 1707
HpyAV CCTTC 5 cut(s) 311, 394, 413, 1078, 1103
HpyCH4III ACNGT 1 cut(s) 305
HpyCH4IV ACGT 7 cut(s) 202, 261, 271, 330, 704, 1103, 1794
HpyF10VI GCNNNNNNNGC 5 cut(s) 593, 599, 830, 1025, 1379
HpyF3I CTNAG 2 cut(s) 224, 1313
HpySE526I ACGT 7 cut(s) 202, 261, 271, 330, 704, 1103, 1794
Hsp92II CATG 9 cut(s) 166, 286, 447, 556, 931, 949, 1144, 1300, 1654
HspAI GCGC 1 cut(s) 1317
Ksp22I TGATCA 1 cut(s) 534
Kzo9I GATC 7 cut(s) 25, 124, 534, 811, 948, 1206, 1366
LguI GCTCTTC 2 cut(s) 1167, 1489
LmnI GCTCC 4 cut(s) 653, 758, 1016, 1024
Lsp1109I GCAGC 6 cut(s) 230, 605, 845, 1015, 1306, 1309
LweI GCATC 4 cut(s) 222, 1221, 1374, 1811
MaeI CTAG 3 cut(s) 194, 1025, 1326
MaeII ACGT 7 cut(s) 202, 261, 271, 330, 704, 1103, 1794
MaeIII GTNAC 6 cut(s) 326, 619, 1292, 1300, 1390, 1448
MalI GATC 7 cut(s) 27, 126, 536, 813, 950, 1208, 1368
MboI GATC 7 cut(s) 25, 124, 534, 811, 948, 1206, 1366
MfeI CAATTG 2 cut(s) 1425, 1656
MflI RGATCY 1 cut(s) 811
MhlI GDGCHC 5 cut(s) 36, 299, 658, 1021, 1634
MlsI TGGCCA 1 cut(s) 564
MluNI TGGCCA 1 cut(s) 564
MlyI GAGTC 2 cut(s) 904, 1387
MmeI TCCRAC 1 cut(s) 622
Mox20I TGGCCA 1 cut(s) 564
MroXI GAANNNNTTC 1 cut(s) 1252
MscI TGGCCA 1 cut(s) 564
MseI TTAA 6 cut(s) 179, 647, 845, 1011, 1398, 1715
MslI CAYNNNNRTG 5 cut(s) 281, 348, 542, 570, 932
Msp20I TGGCCA 1 cut(s) 564
MspCI CTTAAG 1 cut(s) 1397
MspI CCGG 1 cut(s) 861
MspR9I CCNGG 3 cut(s) 438, 861, 1459
MunI CAATTG 2 cut(s) 1425, 1656
Mva1269I GAATGC 1 cut(s) 1384
MvaI CCWGG 2 cut(s) 438, 1459
MwoI GCNNNNNNNGC 5 cut(s) 593, 599, 830, 1025, 1379
NciI CCSGG 1 cut(s) 861
NdeI CATATG 2 cut(s) 874, 1306
NdeII GATC 7 cut(s) 25, 124, 534, 811, 948, 1206, 1366
NlaIII CATG 9 cut(s) 166, 286, 447, 556, 931, 949, 1144, 1300, 1654
NlaIV GGNNCC 1 cut(s) 150
NmuCI GTSAC 3 cut(s) 326, 1390, 1448
NspI RCATGY 1 cut(s) 447
OliI CACNNNNGTG 1 cut(s) 542
PagI TCATGA 1 cut(s) 1140
PceI AGGCCT 1 cut(s) 52
PciI ACATGT 1 cut(s) 443
PciSI GCTCTTC 2 cut(s) 1167, 1489
PctI GAATGC 1 cut(s) 1384
PdmI GAANNNNTTC 1 cut(s) 1252
PfeI GAWTC 5 cut(s) 184, 856, 1124, 1411, 1556
PfoI TCCNGGA 1 cut(s) 859
PkrI GCNGC 6 cut(s) 245, 595, 835, 1030, 1321, 1324
PleI GAGTC 2 cut(s) 904, 1387
PpsI GAGTC 2 cut(s) 904, 1387
Ppu21I YACGTR 1 cut(s) 1104
PpuMI RGGWCCY 1 cut(s) 149
PscI ACATGT 1 cut(s) 443
Psp124BI GAGCTC 2 cut(s) 658, 1021
Psp1406I AACGTT 1 cut(s) 704
Psp5II RGGWCCY 1 cut(s) 149
Psp6I CCWGG 2 cut(s) 436, 1457
PspGI CCWGG 2 cut(s) 436, 1457
PspN4I GGNNCC 1 cut(s) 150
PspPI GGNCC 3 cut(s) 149, 335, 1153
PspPPI RGGWCCY 1 cut(s) 149
PsuI RGATCY 1 cut(s) 811
RsaI GTAC 5 cut(s) 960, 990, 1330, 1500, 1793
RsaNI GTAC 5 cut(s) 959, 989, 1329, 1499, 1792
RseI CAYNNNNRTG 5 cut(s) 281, 348, 542, 570, 932
SacI GAGCTC 2 cut(s) 658, 1021
SapI GCTCTTC 2 cut(s) 1167, 1489
SaqAI TTAA 6 cut(s) 179, 647, 845, 1011, 1398, 1715
SatI GCNGC 6 cut(s) 244, 594, 834, 1029, 1320, 1323
Sau3AI GATC 7 cut(s) 25, 124, 534, 811, 948, 1206, 1366
Sau96I GGNCC 3 cut(s) 149, 335, 1153
ScaI AGTACT 1 cut(s) 1500
SchI GAGTC 2 cut(s) 904, 1387
ScrFI CCNGG 3 cut(s) 438, 861, 1459
SduI GDGCHC 5 cut(s) 36, 299, 658, 1021, 1634
SfaNI GCATC 4 cut(s) 222, 1221, 1374, 1811
SfcI CTRYAG 1 cut(s) 765
SinI GGWCC 2 cut(s) 149, 1153
SmiMI CAYNNNNRTG 5 cut(s) 281, 348, 542, 570, 932
SmlI CTYRAG 4 cut(s) 659, 895, 1397, 1766
SmoI CTYRAG 4 cut(s) 659, 895, 1397, 1766
SseBI AGGCCT 1 cut(s) 52
SsiI CCGC 2 cut(s) 831, 1170
SspMI CTAG 3 cut(s) 194, 1025, 1326
SstI GAGCTC 2 cut(s) 658, 1021
StuI AGGCCT 1 cut(s) 52
StyD4I CCNGG 3 cut(s) 436, 859, 1457
StyI CCWWGG 3 cut(s) 229, 597, 1695
TaaI ACNGT 1 cut(s) 305
TaiI ACGT 7 cut(s) 205, 264, 274, 333, 707, 1106, 1797
TaqI TCGA 3 cut(s) 216, 392, 1203
TatI WGTACW 3 cut(s) 958, 1328, 1498
TfiI GAWTC 5 cut(s) 184, 856, 1124, 1411, 1556
Tru1I TTAA 6 cut(s) 179, 647, 845, 1011, 1398, 1715
Tru9I TTAA 6 cut(s) 179, 647, 845, 1011, 1398, 1715
TscAI CASTG 1 cut(s) 1822
TseFI GTSAC 3 cut(s) 326, 1390, 1448
TseI GCWGC 6 cut(s) 243, 593, 833, 1028, 1319, 1322
Tsp45I GTSAC 3 cut(s) 326, 1390, 1448
TspDTI ATGAA 6 cut(s) 413, 953, 1107, 1245, 1359, 1462
TspGWI ACGGA 2 cut(s) 735, 907
TspRI CASTG 1 cut(s) 1822
Vha464I CTTAAG 1 cut(s) 1397
VneI GTGCAC 1 cut(s) 295
VpaK11BI GGWCC 2 cut(s) 149, 1153
XapI RAATTY 2 cut(s) 170, 1090
XceI RCATGY 1 cut(s) 447
XmiI GTMKAC 1 cut(s) 779
XmnI GAANNNNTTC 1 cut(s) 1252
XspI CTAG 3 cut(s) 194, 1025, 1326
ZrmI AGTACT 1 cut(s) 1500
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.