MATE efflux family protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 372 |
| AccI | GTMKAC | 1 cut(s) | 252 |
| AccII | CGCG | 1 cut(s) | 1187 |
| AccIII | TCCGGA | 1 cut(s) | 154 |
| AciI | CCGC | 3 cut(s) | 103, 435, 1485 |
| AclI | AACGTT | 1 cut(s) | 381 |
| AclWI | GGATC | 4 cut(s) | 202, 292, 569, 1123 |
| AcoI | YGGCCR | 2 cut(s) | 325, 363 |
| AcsI | RAATTY | 4 cut(s) | 582, 611, 917, 1387 |
| AcuI | CTGAAG | 2 cut(s) | 192, 326 |
| AfaI | GTAC | 4 cut(s) | 122, 246, 461, 865 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 372, 1571, 1585 |
| AflII | CTTAAG | 1 cut(s) | 1160 |
| AflIII | ACRYGT | 1 cut(s) | 129 |
| AgeI | ACCGGT | 1 cut(s) | 386 |
| AgsI | TTSAA | 9 cut(s) | 588, 610, 775, 835, 895, 1284, 1328, 1447, 1499 |
| AjiI | CACGTC | 1 cut(s) | 130 |
| AjnI | CCWGG | 1 cut(s) | 1126 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 107, 139, 165, 197, 272, 304 |
| AleI | CACNNNNGTG | 3 cut(s) | 281, 333, 1097 |
| AluBI | AGCT | 6 cut(s) | 340, 419, 488, 782, 1136, 1165 |
| AluI | AGCT | 6 cut(s) | 340, 419, 488, 782, 1136, 1165 |
| Alw21I | GWGCWC | 2 cut(s) | 421, 784 |
| Alw26I | GTCTC | 3 cut(s) | 313, 419, 1493 |
| AlwI | GGATC | 4 cut(s) | 202, 292, 569, 1123 |
| Aor13HI | TCCGGA | 1 cut(s) | 154 |
| AoxI | GGCC | 7 cut(s) | 237, 325, 363, 375, 828, 1072, 1197 |
| ApeKI | GCWGC | 4 cut(s) | 596, 791, 1082, 1085 |
| ApoI | RAATTY | 4 cut(s) | 582, 611, 917, 1387 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 234, 266 |
| AsiGI | ACCGGT | 1 cut(s) | 386 |
| AspS9I | GGNCC | 2 cut(s) | 375, 1198 |
| AsuC2I | CCSGG | 1 cut(s) | 624 |
| AsuHPI | GGTGA | 3 cut(s) | 268, 347, 898 |
| BalI | TGGCCA | 2 cut(s) | 327, 365 |
| BanII | GRGCYC | 3 cut(s) | 421, 552, 784 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 104, 136 |
| BbsI | GAAGAC | 2 cut(s) | 694, 1421 |
| Bbv12I | GWGCWC | 2 cut(s) | 421, 784 |
| BbvI | GCAGC | 4 cut(s) | 583, 803, 1069, 1097 |
| BccI | CCATC | 3 cut(s) | 170, 576, 820 |
| BceAI | ACGGC | 1 cut(s) | 777 |
| BciT130I | CCWGG | 1 cut(s) | 1128 |
| BcnI | CCSGG | 1 cut(s) | 624 |
| BcoDI | GTCTC | 3 cut(s) | 313, 419, 1493 |
| BfaI | CTAG | 2 cut(s) | 1350, 1591 |
| BfmI | CTRYAG | 2 cut(s) | 45, 1083 |
| BfrI | CTTAAG | 1 cut(s) | 1160 |
| BisI | GCNGC | 4 cut(s) | 597, 792, 1083, 1086 |
| BlsI | GCNGC | 4 cut(s) | 598, 793, 1084, 1087 |
| Bme1390I | CCNGG | 2 cut(s) | 624, 1128 |
| BmgBI | CACGTC | 1 cut(s) | 130 |
| BmgT120I | GGNCC | 2 cut(s) | 375, 1198 |
| BmiI | GGNNCC | 1 cut(s) | 153 |
| BmrFI | CCNGG | 2 cut(s) | 624, 1128 |
| BmrI | ACTGGG | 1 cut(s) | 1574 |
| BmsI | GCATC | 2 cut(s) | 504, 984 |
| BmuI | ACTGGG | 1 cut(s) | 1574 |
| BpiI | GAAGAC | 2 cut(s) | 694, 1421 |
| BpuEI | CTTGAG | 3 cut(s) | 443, 679, 1514 |
| BpuMI | CCSGG | 1 cut(s) | 624 |
| BsaI | GGTCTC | 2 cut(s) | 313, 1493 |
| BsaJI | CCNNGG | 2 cut(s) | 622, 1458 |
| BsaWI | WCCGGW | 2 cut(s) | 154, 386 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 372, 1571, 1585 |
| Bse118I | RCCGGY | 2 cut(s) | 386, 908 |
| Bse1I | ACTGG | 1 cut(s) | 1580 |
| Bse3DI | GCAATG | 3 cut(s) | 1152, 1252, 1292 |
| BseAI | TCCGGA | 1 cut(s) | 154 |
| BseBI | CCWGG | 1 cut(s) | 1128 |
| BseDI | CCNNGG | 2 cut(s) | 622, 1458 |
| BseGI | GGATG | 2 cut(s) | 1361, 1561 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 372, 1571, 1585 |
| BseMI | GCAATG | 3 cut(s) | 1152, 1252, 1292 |
| BseMII | CTCAG | 4 cut(s) | 324, 720, 1017, 1090 |
| BseNI | ACTGG | 1 cut(s) | 1580 |
| BseRI | GAGGAG | 1 cut(s) | 248 |
| BseXI | GCAGC | 4 cut(s) | 583, 803, 1069, 1097 |
| Bsh1236I | CGCG | 1 cut(s) | 1187 |
| BshFI | GGCC | 7 cut(s) | 239, 327, 365, 377, 830, 1074, 1199 |
| BshTI | ACCGGT | 1 cut(s) | 386 |
| BsiHKAI | GWGCWC | 2 cut(s) | 421, 784 |
| BsiSI | CCGG | 4 cut(s) | 155, 387, 624, 909 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 372, 1571, 1585 |
| BsmAI | GTCTC | 3 cut(s) | 313, 419, 1493 |
| BsmI | GAATGC | 1 cut(s) | 1147 |
| BsnI | GGCC | 7 cut(s) | 239, 327, 365, 377, 830, 1074, 1199 |
| Bso31I | GGTCTC | 2 cut(s) | 313, 1493 |
| Bsp1286I | GDGCHC | 3 cut(s) | 421, 552, 784 |
| Bsp13I | TCCGGA | 1 cut(s) | 154 |
| Bsp143I | GATC | 5 cut(s) | 165, 194, 297, 574, 1115 |
| Bsp68I | TCGCGA | 1 cut(s) | 1187 |
| BspACI | CCGC | 3 cut(s) | 103, 435, 1485 |
| BspANI | GGCC | 7 cut(s) | 239, 327, 365, 377, 830, 1074, 1199 |
| BspCNI | CTCAG | 4 cut(s) | 323, 719, 1016, 1089 |
| BspEI | TCCGGA | 1 cut(s) | 154 |
| BspFNI | CGCG | 1 cut(s) | 1187 |
| BspHI | TCATGA | 1 cut(s) | 519 |
| BspLI | GGNNCC | 1 cut(s) | 153 |
| BspMAI | CTGCAG | 1 cut(s) | 1087 |
| BspPI | GGATC | 4 cut(s) | 202, 292, 569, 1123 |
| BspTI | CTTAAG | 1 cut(s) | 1160 |
| BspTNI | GGTCTC | 2 cut(s) | 313, 1493 |
| BsrDI | GCAATG | 3 cut(s) | 1152, 1252, 1292 |
| BsrFI | RCCGGY | 2 cut(s) | 386, 908 |
| BsrI | ACTGG | 1 cut(s) | 1580 |
| BssAI | RCCGGY | 2 cut(s) | 386, 908 |
| BssECI | CCNNGG | 2 cut(s) | 622, 1458 |
| BssMI | GATC | 5 cut(s) | 165, 194, 297, 574, 1115 |
| BssT1I | CCWWGG | 1 cut(s) | 1458 |
| Bst2UI | CCWGG | 1 cut(s) | 1128 |
| Bst4CI | ACNGT | 1 cut(s) | 222 |
| Bst6I | CTCTTC | 1 cut(s) | 515 |
| BstAFI | CTTAAG | 1 cut(s) | 1160 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1256 |
| BstC8I | GCNNGC | 6 cut(s) | 325, 437, 1090, 1228, 1299, 1504 |
| BstDEI | CTNAG | 5 cut(s) | 310, 706, 1003, 1076, 1137 |
| BstF5I | GGATG | 2 cut(s) | 1361, 1561 |
| BstFNI | CGCG | 1 cut(s) | 1187 |
| BstKTI | GATC | 5 cut(s) | 168, 197, 300, 577, 1118 |
| BstMAI | GTCTC | 3 cut(s) | 313, 419, 1493 |
| BstMBI | GATC | 5 cut(s) | 165, 194, 297, 574, 1115 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 362, 441, 788, 1128, 1142, 1171, 1256 |
| BstNI | CCWGG | 1 cut(s) | 1128 |
| BstSCI | CCNGG | 2 cut(s) | 622, 1126 |
| BstSFI | CTRYAG | 2 cut(s) | 45, 1083 |
| BstUI | CGCG | 1 cut(s) | 1187 |
| BstV1I | GCAGC | 4 cut(s) | 583, 803, 1069, 1097 |
| BstV2I | GAAGAC | 2 cut(s) | 694, 1421 |
| BstX2I | RGATCY | 1 cut(s) | 574 |
| BstYI | RGATCY | 1 cut(s) | 574 |
| BsuRI | GGCC | 7 cut(s) | 239, 327, 365, 377, 830, 1074, 1199 |
| BtrI | CACGTC | 1 cut(s) | 130 |
| BtsCI | GGATG | 2 cut(s) | 1361, 1561 |
| BtsI | GCAGTG | 2 cut(s) | 260, 1523 |
| BtsIMutI | CAGTG | 3 cut(s) | 260, 1084, 1523 |
| BtuMI | TCGCGA | 1 cut(s) | 1187 |
| Cac8I | GCNNGC | 6 cut(s) | 325, 437, 1090, 1228, 1299, 1504 |
| CciI | TCATGA | 1 cut(s) | 519 |
| Cfr10I | RCCGGY | 2 cut(s) | 386, 908 |
| Cfr13I | GGNCC | 2 cut(s) | 375, 1198 |
| Csp6I | GTAC | 4 cut(s) | 121, 245, 460, 864 |
| CspAI | ACCGGT | 1 cut(s) | 386 |
| CviQI | GTAC | 4 cut(s) | 121, 245, 460, 864 |
| DdeI | CTNAG | 5 cut(s) | 310, 706, 1003, 1076, 1137 |
| DpnI | GATC | 5 cut(s) | 167, 196, 299, 576, 1117 |
| DpnII | GATC | 5 cut(s) | 165, 194, 297, 574, 1115 |
| EaeI | YGGCCR | 2 cut(s) | 325, 363 |
| Eam1104I | CTCTTC | 1 cut(s) | 515 |
| EarI | CTCTTC | 1 cut(s) | 515 |
| Ecl136II | GAGCTC | 2 cut(s) | 419, 782 |
| Eco130I | CCWWGG | 1 cut(s) | 1458 |
| Eco24I | GRGCYC | 3 cut(s) | 421, 552, 784 |
| Eco31I | GGTCTC | 2 cut(s) | 313, 1493 |
| Eco32I | GATATC | 2 cut(s) | 525, 813 |
| Eco53kI | GAGCTC | 2 cut(s) | 419, 782 |
| Eco57I | CTGAAG | 2 cut(s) | 192, 326 |
| EcoICRI | GAGCTC | 2 cut(s) | 419, 782 |
| EcoRII | CCWGG | 1 cut(s) | 1126 |
| EcoRV | GATATC | 2 cut(s) | 525, 813 |
| EcoT14I | CCWWGG | 1 cut(s) | 1458 |
| EcoT38I | GRGCYC | 3 cut(s) | 421, 552, 784 |
| ErhI | CCWWGG | 1 cut(s) | 1458 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 165, 197 |
| FauI | CCCGC | 1 cut(s) | 428 |
| FauNDI | CATATG | 1 cut(s) | 637 |
| FblI | GTMKAC | 1 cut(s) | 252 |
| Fnu4HI | GCNGC | 4 cut(s) | 597, 792, 1083, 1086 |
| FokI | GGATG | 2 cut(s) | 1368, 1548 |
| FriOI | GRGCYC | 3 cut(s) | 421, 552, 784 |
| Fsp4HI | GCNGC | 4 cut(s) | 597, 792, 1083, 1086 |
| FspBI | CTAG | 2 cut(s) | 1350, 1591 |
| GluI | GCNGC | 4 cut(s) | 597, 792, 1083, 1086 |
| HaeIII | GGCC | 7 cut(s) | 239, 327, 365, 377, 830, 1074, 1199 |
| HapII | CCGG | 4 cut(s) | 155, 387, 624, 909 |
| HindIII | AAGCTT | 1 cut(s) | 486 |
| HinfI | GANTC | 9 cut(s) | 17, 642, 887, 970, 1156, 1319, 1332, 1540, 1550 |
| HpaII | CCGG | 4 cut(s) | 155, 387, 624, 909 |
| HphI | GGTGA | 3 cut(s) | 268, 347, 898 |
| Hpy166II | GTNNAC | 2 cut(s) | 121, 253 |
| Hpy188I | TCNGA | 4 cut(s) | 22, 31, 672, 1549 |
| Hpy188III | TCNNGA | 9 cut(s) | 155, 422, 520, 572, 658, 808, 1186, 1531, 1565 |
| Hpy8I | GTNNAC | 2 cut(s) | 121, 253 |
| HpyAV | CCTTC | 6 cut(s) | 77, 185, 198, 841, 866, 1565 |
| HpyCH4III | ACNGT | 1 cut(s) | 222 |
| HpyCH4IV | ACGT | 3 cut(s) | 129, 228, 381 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 362, 441, 788, 1128, 1142, 1171, 1256 |
| HpyF3I | CTNAG | 5 cut(s) | 310, 706, 1003, 1076, 1137 |
| HpySE526I | ACGT | 3 cut(s) | 129, 228, 381 |
| Kpn2I | TCCGGA | 1 cut(s) | 154 |
| Kzo9I | GATC | 5 cut(s) | 165, 194, 297, 574, 1115 |
| LmnI | GCTCC | 3 cut(s) | 416, 779, 787 |
| Lsp1109I | GCAGC | 4 cut(s) | 583, 803, 1069, 1097 |
| LweI | GCATC | 2 cut(s) | 504, 984 |
| MaeI | CTAG | 2 cut(s) | 1350, 1591 |
| MaeII | ACGT | 3 cut(s) | 129, 228, 381 |
| MaeIII | GTNAC | 5 cut(s) | 382, 1055, 1063, 1153, 1211 |
| MalI | GATC | 5 cut(s) | 167, 196, 299, 576, 1117 |
| MboI | GATC | 5 cut(s) | 165, 194, 297, 574, 1115 |
| MfeI | CAATTG | 1 cut(s) | 1419 |
| MflI | RGATCY | 1 cut(s) | 574 |
| MhlI | GDGCHC | 3 cut(s) | 421, 552, 784 |
| MlsI | TGGCCA | 2 cut(s) | 327, 365 |
| MluNI | TGGCCA | 2 cut(s) | 327, 365 |
| MlyI | GAGTC | 3 cut(s) | 1150, 1341, 1534 |
| Mox20I | TGGCCA | 2 cut(s) | 327, 365 |
| MroI | TCCGGA | 1 cut(s) | 154 |
| MscI | TGGCCA | 2 cut(s) | 327, 365 |
| MseI | TTAA | 5 cut(s) | 410, 840, 914, 1161, 1440 |
| MslI | CAYNNNNRTG | 5 cut(s) | 281, 333, 695, 1097, 1511 |
| Msp20I | TGGCCA | 2 cut(s) | 327, 365 |
| MspCI | CTTAAG | 1 cut(s) | 1160 |
| MspI | CCGG | 4 cut(s) | 155, 387, 624, 909 |
| MspR9I | CCNGG | 2 cut(s) | 624, 1128 |
| MunI | CAATTG | 1 cut(s) | 1419 |
| Mva1269I | GAATGC | 1 cut(s) | 1147 |
| MvaI | CCWGG | 1 cut(s) | 1128 |
| MvnI | CGCG | 1 cut(s) | 1187 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 362, 441, 788, 1128, 1142, 1171, 1256 |
| NciI | CCSGG | 1 cut(s) | 624 |
| NdeI | CATATG | 1 cut(s) | 637 |
| NdeII | GATC | 5 cut(s) | 165, 194, 297, 574, 1115 |
| NlaIV | GGNNCC | 1 cut(s) | 153 |
| NmuCI | GTSAC | 2 cut(s) | 1153, 1211 |
| NruI | TCGCGA | 1 cut(s) | 1187 |
| OliI | CACNNNNGTG | 3 cut(s) | 281, 333, 1097 |
| PagI | TCATGA | 1 cut(s) | 519 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 887 |
| PctI | GAATGC | 1 cut(s) | 1147 |
| PfeI | GAWTC | 6 cut(s) | 17, 642, 887, 970, 1319, 1550 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 372 |
| PinAI | ACCGGT | 1 cut(s) | 386 |
| PkrI | GCNGC | 4 cut(s) | 598, 793, 1084, 1087 |
| PleI | GAGTC | 3 cut(s) | 1150, 1340, 1534 |
| PpsI | GAGTC | 3 cut(s) | 1150, 1340, 1534 |
| Psp124BI | GAGCTC | 2 cut(s) | 421, 784 |
| Psp1406I | AACGTT | 1 cut(s) | 381 |
| Psp6I | CCWGG | 1 cut(s) | 1126 |
| PspGI | CCWGG | 1 cut(s) | 1126 |
| PspN4I | GGNNCC | 1 cut(s) | 153 |
| PspPI | GGNCC | 2 cut(s) | 375, 1198 |
| PstI | CTGCAG | 1 cut(s) | 1087 |
| PsuI | RGATCY | 1 cut(s) | 574 |
| RruI | TCGCGA | 1 cut(s) | 1187 |
| RsaI | GTAC | 4 cut(s) | 122, 246, 461, 865 |
| RsaNI | GTAC | 4 cut(s) | 121, 245, 460, 864 |
| RseI | CAYNNNNRTG | 5 cut(s) | 281, 333, 695, 1097, 1511 |
| SacI | GAGCTC | 2 cut(s) | 421, 784 |
| SaqAI | TTAA | 5 cut(s) | 410, 840, 914, 1161, 1440 |
| SatI | GCNGC | 4 cut(s) | 597, 792, 1083, 1086 |
| Sau3AI | GATC | 5 cut(s) | 165, 194, 297, 574, 1115 |
| Sau96I | GGNCC | 2 cut(s) | 375, 1198 |
| SchI | GAGTC | 3 cut(s) | 1150, 1341, 1534 |
| ScrFI | CCNGG | 2 cut(s) | 624, 1128 |
| SduI | GDGCHC | 3 cut(s) | 421, 552, 784 |
| SfaNI | GCATC | 2 cut(s) | 504, 984 |
| SfcI | CTRYAG | 2 cut(s) | 45, 1083 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 281, 333, 695, 1097, 1511 |
| SmlI | CTYRAG | 4 cut(s) | 422, 658, 1160, 1529 |
| SmoI | CTYRAG | 4 cut(s) | 422, 658, 1160, 1529 |
| SsiI | CCGC | 3 cut(s) | 103, 435, 1485 |
| SspMI | CTAG | 2 cut(s) | 1350, 1591 |
| SstI | GAGCTC | 2 cut(s) | 421, 784 |
| StyD4I | CCNGG | 2 cut(s) | 622, 1126 |
| StyI | CCWWGG | 1 cut(s) | 1458 |
| TaaI | ACNGT | 1 cut(s) | 222 |
| TaiI | ACGT | 3 cut(s) | 132, 231, 384 |
| TaqI | TCGA | 2 cut(s) | 135, 881 |
| TatI | WGTACW | 2 cut(s) | 120, 244 |
| TfiI | GAWTC | 6 cut(s) | 17, 642, 887, 970, 1319, 1550 |
| Tru1I | TTAA | 5 cut(s) | 410, 840, 914, 1161, 1440 |
| Tru9I | TTAA | 5 cut(s) | 410, 840, 914, 1161, 1440 |
| TscAI | CASTG | 3 cut(s) | 267, 1084, 1530 |
| TseFI | GTSAC | 2 cut(s) | 1153, 1211 |
| TseI | GCWGC | 4 cut(s) | 596, 791, 1082, 1085 |
| Tsp45I | GTSAC | 2 cut(s) | 1153, 1211 |
| TspDTI | ATGAA | 8 cut(s) | 360, 508, 656, 716, 970, 1122, 1225, 1542 |
| TspRI | CASTG | 3 cut(s) | 267, 1084, 1530 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 372 |
| Vha464I | CTTAAG | 1 cut(s) | 1160 |
| XapI | RAATTY | 4 cut(s) | 582, 611, 917, 1387 |
| XmiI | GTMKAC | 1 cut(s) | 252 |
| XspI | CTAG | 2 cut(s) | 1350, 1591 |