MATE efflux family protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 57 |
| AccI | GTMKAC | 1 cut(s) | 227 |
| AclWI | GGATC | 1 cut(s) | 254 |
| AcoI | YGGCCR | 2 cut(s) | 10, 48 |
| AcsI | RAATTY | 2 cut(s) | 296, 538 |
| AcuI | CTGAAG | 2 cut(s) | 338, 465 |
| AdeI | CACNNNGTG | 1 cut(s) | 119 |
| AfaI | GTAC | 3 cut(s) | 438, 778, 948 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 35, 57 |
| AflII | CTTAAG | 1 cut(s) | 845 |
| AgsI | TTSAA | 6 cut(s) | 295, 460, 601, 936, 993, 1132 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 894 |
| AleI | CACNNNNGTG | 1 cut(s) | 18 |
| Alw21I | GWGCWC | 2 cut(s) | 106, 469 |
| Alw26I | GTCTC | 2 cut(s) | 104, 1178 |
| AlwI | GGATC | 1 cut(s) | 254 |
| Ama87I | CYCGRG | 1 cut(s) | 811 |
| AoxI | GGCC | 6 cut(s) | 10, 48, 60, 325, 513, 757 |
| ApeKI | GCWGC | 3 cut(s) | 281, 476, 1051 |
| ApoI | RAATTY | 2 cut(s) | 296, 538 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 700 |
| AspS9I | GGNCC | 1 cut(s) | 60 |
| AsuC2I | CCSGG | 3 cut(s) | 309, 812, 813 |
| AsuHPI | GGTGA | 1 cut(s) | 32 |
| AvaI | CYCGRG | 1 cut(s) | 811 |
| BaeGI | GKGCMC | 1 cut(s) | 913 |
| BalI | TGGCCA | 2 cut(s) | 12, 50 |
| BanII | GRGCYC | 2 cut(s) | 106, 469 |
| BbsI | GAAGAC | 1 cut(s) | 1106 |
| Bbv12I | GWGCWC | 2 cut(s) | 106, 469 |
| BbvI | GCAGC | 3 cut(s) | 293, 488, 1063 |
| BccI | CCATC | 4 cut(s) | 212, 261, 374, 428 |
| BcnI | CCSGG | 3 cut(s) | 309, 812, 813 |
| BcoDI | GTCTC | 2 cut(s) | 104, 1178 |
| BfaI | CTAG | 3 cut(s) | 473, 774, 1275 |
| BfmI | CTRYAG | 1 cut(s) | 279 |
| BfrI | CTTAAG | 1 cut(s) | 845 |
| BisI | GCNGC | 3 cut(s) | 282, 477, 1052 |
| BlsI | GCNGC | 3 cut(s) | 283, 478, 1053 |
| BmcAI | AGTACT | 1 cut(s) | 948 |
| Bme1390I | CCNGG | 3 cut(s) | 309, 812, 813 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 894 |
| BmeT110I | CYCGRG | 1 cut(s) | 811 |
| BmgT120I | GGNCC | 1 cut(s) | 60 |
| BmiI | GGNNCC | 1 cut(s) | 1272 |
| BmrFI | CCNGG | 3 cut(s) | 309, 812, 813 |
| BmsI | GCATC | 1 cut(s) | 669 |
| BpiI | GAAGAC | 1 cut(s) | 1106 |
| Bpu10I | CCTNAGC | 1 cut(s) | 31 |
| BpuEI | CTTGAG | 3 cut(s) | 128, 364, 1199 |
| BpuMI | CCSGG | 3 cut(s) | 309, 812, 813 |
| BsaI | GGTCTC | 1 cut(s) | 1178 |
| BsaJI | CCNNGG | 4 cut(s) | 16, 45, 811, 1143 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 35, 57 |
| Bse1I | ACTGG | 2 cut(s) | 446, 598 |
| Bse3DI | GCAATG | 2 cut(s) | 720, 837 |
| BseDI | CCNNGG | 4 cut(s) | 16, 45, 811, 1143 |
| BseGI | GGATG | 1 cut(s) | 1046 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 35, 57 |
| BseMI | GCAATG | 2 cut(s) | 720, 837 |
| BseMII | CTCAG | 1 cut(s) | 775 |
| BseNI | ACTGG | 2 cut(s) | 446, 598 |
| BseRI | GAGGAG | 1 cut(s) | 653 |
| BseSI | GKGCMC | 1 cut(s) | 913 |
| BseXI | GCAGC | 3 cut(s) | 293, 488, 1063 |
| BshFI | GGCC | 6 cut(s) | 12, 50, 62, 327, 515, 759 |
| BsiHKAI | GWGCWC | 2 cut(s) | 106, 469 |
| BsiHKCI | CYCGRG | 1 cut(s) | 811 |
| BsiSI | CCGG | 2 cut(s) | 309, 812 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 35, 57 |
| BsmAI | GTCTC | 2 cut(s) | 104, 1178 |
| BsmI | GAATGC | 1 cut(s) | 832 |
| BsnI | GGCC | 6 cut(s) | 12, 50, 62, 327, 515, 759 |
| Bso31I | GGTCTC | 1 cut(s) | 1178 |
| BsoBI | CYCGRG | 1 cut(s) | 811 |
| Bsp1286I | GDGCHC | 3 cut(s) | 106, 469, 913 |
| Bsp143I | GATC | 3 cut(s) | 259, 384, 396 |
| BspANI | GGCC | 6 cut(s) | 12, 50, 62, 327, 515, 759 |
| BspCNI | CTCAG | 1 cut(s) | 774 |
| BspHI | TCATGA | 1 cut(s) | 588 |
| BspLI | GGNNCC | 1 cut(s) | 1272 |
| BspMAI | CTGCAG | 1 cut(s) | 283 |
| BspPI | GGATC | 1 cut(s) | 254 |
| BspTI | CTTAAG | 1 cut(s) | 845 |
| BspTNI | GGTCTC | 1 cut(s) | 1178 |
| BsrDI | GCAATG | 2 cut(s) | 720, 837 |
| BsrI | ACTGG | 2 cut(s) | 446, 598 |
| BssECI | CCNNGG | 4 cut(s) | 16, 45, 811, 1143 |
| BssMI | GATC | 3 cut(s) | 259, 384, 396 |
| BssNAI | GTATAC | 1 cut(s) | 228 |
| BssT1I | CCWWGG | 3 cut(s) | 16, 45, 1143 |
| Bst1107I | GTATAC | 1 cut(s) | 228 |
| Bst4CI | ACNGT | 1 cut(s) | 1197 |
| Bst6I | CTCTTC | 1 cut(s) | 1181 |
| BstAFI | CTTAAG | 1 cut(s) | 845 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 278, 827 |
| BstC8I | GCNNGC | 5 cut(s) | 10, 171, 805, 913, 1189 |
| BstDEI | CTNAG | 2 cut(s) | 31, 761 |
| BstF5I | GGATG | 1 cut(s) | 1046 |
| BstKTI | GATC | 3 cut(s) | 262, 387, 399 |
| BstMAI | GTCTC | 2 cut(s) | 104, 1178 |
| BstMBI | GATC | 3 cut(s) | 259, 384, 396 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 47, 278, 473, 827 |
| BstSCI | CCNGG | 3 cut(s) | 307, 810, 811 |
| BstSFI | CTRYAG | 1 cut(s) | 279 |
| BstSLI | GKGCMC | 1 cut(s) | 913 |
| BstV1I | GCAGC | 3 cut(s) | 293, 488, 1063 |
| BstV2I | GAAGAC | 1 cut(s) | 1106 |
| BstX2I | RGATCY | 1 cut(s) | 259 |
| BstYI | RGATCY | 1 cut(s) | 259 |
| BstZ17I | GTATAC | 1 cut(s) | 228 |
| BsuRI | GGCC | 6 cut(s) | 12, 50, 62, 327, 515, 759 |
| BtsCI | GGATG | 1 cut(s) | 1046 |
| BtsIMutI | CAGTG | 3 cut(s) | 439, 769, 1193 |
| Cac8I | GCNNGC | 5 cut(s) | 10, 171, 805, 913, 1189 |
| CciI | TCATGA | 1 cut(s) | 588 |
| Cfr13I | GGNCC | 1 cut(s) | 60 |
| Cfr9I | CCCGGG | 1 cut(s) | 811 |
| Csp6I | GTAC | 3 cut(s) | 437, 777, 947 |
| CviAII | CATG | 8 cut(s) | 57, 376, 394, 521, 552, 589, 745, 1099 |
| CviQI | GTAC | 3 cut(s) | 437, 777, 947 |
| DdeI | CTNAG | 2 cut(s) | 31, 761 |
| DpnI | GATC | 3 cut(s) | 261, 386, 398 |
| DpnII | GATC | 3 cut(s) | 259, 384, 396 |
| DraIII | CACNNNGTG | 1 cut(s) | 119 |
| DriI | GACNNNNNGTC | 1 cut(s) | 894 |
| EaeI | YGGCCR | 2 cut(s) | 10, 48 |
| Eam1104I | CTCTTC | 1 cut(s) | 1181 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 894 |
| EarI | CTCTTC | 1 cut(s) | 1181 |
| Ecl136II | GAGCTC | 2 cut(s) | 104, 467 |
| Eco130I | CCWWGG | 3 cut(s) | 16, 45, 1143 |
| Eco24I | GRGCYC | 2 cut(s) | 106, 469 |
| Eco31I | GGTCTC | 1 cut(s) | 1178 |
| Eco32I | GATATC | 1 cut(s) | 498 |
| Eco53kI | GAGCTC | 2 cut(s) | 104, 467 |
| Eco57I | CTGAAG | 2 cut(s) | 338, 465 |
| Eco88I | CYCGRG | 1 cut(s) | 811 |
| EcoICRI | GAGCTC | 2 cut(s) | 104, 467 |
| EcoRV | GATATC | 1 cut(s) | 498 |
| EcoT14I | CCWWGG | 3 cut(s) | 16, 45, 1143 |
| EcoT38I | GRGCYC | 2 cut(s) | 106, 469 |
| ErhI | CCWWGG | 3 cut(s) | 16, 45, 1143 |
| FaeI | CATG | 8 cut(s) | 60, 379, 397, 524, 555, 592, 748, 1102 |
| FatI | CATG | 8 cut(s) | 56, 375, 393, 520, 551, 588, 744, 1098 |
| FauNDI | CATATG | 2 cut(s) | 322, 754 |
| FblI | GTMKAC | 1 cut(s) | 227 |
| Fnu4HI | GCNGC | 3 cut(s) | 282, 477, 1052 |
| FokI | GGATG | 1 cut(s) | 1053 |
| FriOI | GRGCYC | 2 cut(s) | 106, 469 |
| Fsp4HI | GCNGC | 3 cut(s) | 282, 477, 1052 |
| FspBI | CTAG | 3 cut(s) | 473, 774, 1275 |
| GluI | GCNGC | 3 cut(s) | 282, 477, 1052 |
| HaeIII | GGCC | 6 cut(s) | 12, 50, 62, 327, 515, 759 |
| HapII | CCGG | 2 cut(s) | 309, 812 |
| Hin1II | CATG | 8 cut(s) | 60, 379, 397, 524, 555, 592, 748, 1102 |
| HindIII | AAGCTT | 1 cut(s) | 171 |
| HinfI | GANTC | 4 cut(s) | 655, 841, 859, 1004 |
| HpaII | CCGG | 2 cut(s) | 309, 812 |
| HphI | GGTGA | 1 cut(s) | 32 |
| Hpy166II | GTNNAC | 4 cut(s) | 228, 439, 724, 1072 |
| Hpy188I | TCNGA | 2 cut(s) | 357, 1231 |
| Hpy188III | TCNNGA | 8 cut(s) | 107, 257, 292, 343, 589, 652, 1001, 1216 |
| Hpy8I | GTNNAC | 4 cut(s) | 228, 439, 724, 1072 |
| Hpy99I | CGWCG | 1 cut(s) | 694 |
| HpyAV | CCTTC | 3 cut(s) | 526, 551, 620 |
| HpyCH4III | ACNGT | 1 cut(s) | 1197 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 47, 278, 473, 827 |
| HpyF3I | CTNAG | 2 cut(s) | 31, 761 |
| Hsp92II | CATG | 8 cut(s) | 60, 379, 397, 524, 555, 592, 748, 1102 |
| Kzo9I | GATC | 3 cut(s) | 259, 384, 396 |
| LmnI | GCTCC | 5 cut(s) | 101, 206, 464, 472, 1270 |
| Lsp1109I | GCAGC | 3 cut(s) | 293, 488, 1063 |
| LweI | GCATC | 1 cut(s) | 669 |
| MaeI | CTAG | 3 cut(s) | 473, 774, 1275 |
| MaeIII | GTNAC | 7 cut(s) | 67, 484, 740, 748, 766, 838, 896 |
| MalI | GATC | 3 cut(s) | 261, 386, 398 |
| MboI | GATC | 3 cut(s) | 259, 384, 396 |
| MboII | GAAGA | 5 cut(s) | 344, 379, 910, 1106, 1168 |
| MfeI | CAATTG | 2 cut(s) | 873, 1104 |
| MflI | RGATCY | 1 cut(s) | 259 |
| MhlI | GDGCHC | 3 cut(s) | 106, 469, 913 |
| MlsI | TGGCCA | 2 cut(s) | 12, 50 |
| MluNI | TGGCCA | 2 cut(s) | 12, 50 |
| MlyI | GAGTC | 1 cut(s) | 835 |
| MmeI | TCCRAC | 1 cut(s) | 70 |
| MnlI | CCTC | 9 cut(s) | 260, 273, 338, 625, 631, 665, 770, 949, 1031 |
| Mox20I | TGGCCA | 2 cut(s) | 12, 50 |
| MroXI | GAANNNNTTC | 1 cut(s) | 700 |
| MscI | TGGCCA | 2 cut(s) | 12, 50 |
| MseI | TTAA | 3 cut(s) | 95, 846, 1163 |
| MslI | CAYNNNNRTG | 3 cut(s) | 18, 380, 1286 |
| Msp20I | TGGCCA | 2 cut(s) | 12, 50 |
| MspCI | CTTAAG | 1 cut(s) | 845 |
| MspI | CCGG | 2 cut(s) | 309, 812 |
| MspR9I | CCNGG | 3 cut(s) | 309, 812, 813 |
| MunI | CAATTG | 2 cut(s) | 873, 1104 |
| Mva1269I | GAATGC | 1 cut(s) | 832 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 47, 278, 473, 827 |
| NciI | CCSGG | 3 cut(s) | 309, 812, 813 |
| NdeI | CATATG | 2 cut(s) | 322, 754 |
| NdeII | GATC | 3 cut(s) | 259, 384, 396 |
| NlaIII | CATG | 8 cut(s) | 60, 379, 397, 524, 555, 592, 748, 1102 |
| NlaIV | GGNNCC | 1 cut(s) | 1272 |
| NmuCI | GTSAC | 2 cut(s) | 838, 896 |
| OliI | CACNNNNGTG | 1 cut(s) | 18 |
| PagI | TCATGA | 1 cut(s) | 588 |
| PctI | GAATGC | 1 cut(s) | 832 |
| PdmI | GAANNNNTTC | 1 cut(s) | 700 |
| PfeI | GAWTC | 3 cut(s) | 655, 859, 1004 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 57 |
| PfoI | TCCNGGA | 1 cut(s) | 307 |
| PkrI | GCNGC | 3 cut(s) | 283, 478, 1053 |
| PleI | GAGTC | 1 cut(s) | 835 |
| PpsI | GAGTC | 1 cut(s) | 835 |
| Psp124BI | GAGCTC | 2 cut(s) | 106, 469 |
| PspN4I | GGNNCC | 1 cut(s) | 1272 |
| PspPI | GGNCC | 1 cut(s) | 60 |
| PstI | CTGCAG | 1 cut(s) | 283 |
| PsuI | RGATCY | 1 cut(s) | 259 |
| RsaI | GTAC | 3 cut(s) | 438, 778, 948 |
| RsaNI | GTAC | 3 cut(s) | 437, 777, 947 |
| RseI | CAYNNNNRTG | 3 cut(s) | 18, 380, 1286 |
| SacI | GAGCTC | 2 cut(s) | 106, 469 |
| SaqAI | TTAA | 3 cut(s) | 95, 846, 1163 |
| SatI | GCNGC | 3 cut(s) | 282, 477, 1052 |
| Sau3AI | GATC | 3 cut(s) | 259, 384, 396 |
| Sau96I | GGNCC | 1 cut(s) | 60 |
| ScaI | AGTACT | 1 cut(s) | 948 |
| SchI | GAGTC | 1 cut(s) | 835 |
| ScrFI | CCNGG | 3 cut(s) | 309, 812, 813 |
| SduI | GDGCHC | 3 cut(s) | 106, 469, 913 |
| SfaNI | GCATC | 1 cut(s) | 669 |
| SfcI | CTRYAG | 1 cut(s) | 279 |
| SmaI | CCCGGG | 1 cut(s) | 813 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 18, 380, 1286 |
| SmlI | CTYRAG | 4 cut(s) | 107, 343, 845, 1214 |
| SmoI | CTYRAG | 4 cut(s) | 107, 343, 845, 1214 |
| SspMI | CTAG | 3 cut(s) | 473, 774, 1275 |
| SstI | GAGCTC | 2 cut(s) | 106, 469 |
| StyD4I | CCNGG | 3 cut(s) | 307, 810, 811 |
| StyI | CCWWGG | 3 cut(s) | 16, 45, 1143 |
| TaaI | ACNGT | 1 cut(s) | 1197 |
| TaqI | TCGA | 3 cut(s) | 651, 689, 817 |
| TatI | WGTACW | 3 cut(s) | 436, 776, 946 |
| TfiI | GAWTC | 3 cut(s) | 655, 859, 1004 |
| Tru1I | TTAA | 3 cut(s) | 95, 846, 1163 |
| Tru9I | TTAA | 3 cut(s) | 95, 846, 1163 |
| TscAI | CASTG | 3 cut(s) | 446, 769, 1200 |
| TseFI | GTSAC | 2 cut(s) | 838, 896 |
| TseI | GCWGC | 3 cut(s) | 281, 476, 1051 |
| Tsp45I | GTSAC | 2 cut(s) | 838, 896 |
| TspDTI | ATGAA | 6 cut(s) | 45, 401, 555, 693, 807, 910 |
| TspMI | CCCGGG | 1 cut(s) | 811 |
| TspRI | CASTG | 3 cut(s) | 446, 769, 1200 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 57 |
| Vha464I | CTTAAG | 1 cut(s) | 845 |
| XapI | RAATTY | 2 cut(s) | 296, 538 |
| XmaI | CCCGGG | 1 cut(s) | 811 |
| XmiI | GTMKAC | 1 cut(s) | 227 |
| XmnI | GAANNNNTTC | 1 cut(s) | 700 |
| XspI | CTAG | 3 cut(s) | 473, 774, 1275 |
| ZrmI | AGTACT | 1 cut(s) | 948 |