MATE efflux family protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 210 |
| AccI | GTMKAC | 2 cut(s) | 63, 1309 |
| AccII | CGCG | 1 cut(s) | 1130 |
| AccIII | TCCGGA | 1 cut(s) | 1006 |
| AciI | CCGC | 2 cut(s) | 273, 963 |
| AclI | AACGTT | 1 cut(s) | 1277 |
| AclWI | GGATC | 4 cut(s) | 40, 130, 407, 451 |
| AcoI | YGGCCR | 1 cut(s) | 163 |
| AcsI | RAATTY | 4 cut(s) | 312, 420, 449, 797 |
| AcuI | CTGAAG | 4 cut(s) | 30, 164, 491, 618 |
| AcyI | GRCGYC | 1 cut(s) | 1169 |
| AfaI | GTAC | 2 cut(s) | 685, 1143 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 210 |
| AflII | CTTAAG | 1 cut(s) | 1040 |
| AflIII | ACRYGT | 1 cut(s) | 492 |
| AgsI | TTSAA | 8 cut(s) | 263, 426, 448, 754, 984, 1188, 1208, 1327 |
| AleI | CACNNNNGTG | 2 cut(s) | 119, 171 |
| AluBI | AGCT | 8 cut(s) | 178, 257, 326, 620, 632, 693, 1016, 1045 |
| AluI | AGCT | 8 cut(s) | 178, 257, 326, 620, 632, 693, 1016, 1045 |
| Alw21I | GWGCWC | 5 cut(s) | 259, 594, 622, 704, 1410 |
| Alw26I | GTCTC | 3 cut(s) | 151, 1373, 1474 |
| Alw44I | GTGCAC | 1 cut(s) | 590 |
| AlwI | GGATC | 4 cut(s) | 40, 130, 407, 451 |
| Aor13HI | TCCGGA | 1 cut(s) | 1006 |
| AoxI | GGCC | 4 cut(s) | 163, 213, 759, 952 |
| ApaLI | GTGCAC | 1 cut(s) | 590 |
| ApeKI | GCWGC | 3 cut(s) | 434, 629, 965 |
| ApoI | RAATTY | 4 cut(s) | 312, 420, 449, 797 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 895 |
| AspLEI | GCGC | 1 cut(s) | 194 |
| AspS9I | GGNCC | 2 cut(s) | 213, 760 |
| AsuC2I | CCSGG | 1 cut(s) | 462 |
| AsuHPI | GGTGA | 3 cut(s) | 106, 185, 398 |
| AsuII | TTCGAA | 1 cut(s) | 723 |
| BaeGI | GKGCMC | 1 cut(s) | 594 |
| BalI | TGGCCA | 1 cut(s) | 165 |
| BanII | GRGCYC | 2 cut(s) | 259, 622 |
| BbsI | GAAGAC | 1 cut(s) | 532 |
| Bbv12I | GWGCWC | 5 cut(s) | 259, 594, 622, 704, 1410 |
| BbvI | GCAGC | 3 cut(s) | 446, 641, 952 |
| BcnI | CCSGG | 1 cut(s) | 462 |
| BcoDI | GTCTC | 3 cut(s) | 151, 1373, 1474 |
| BfaI | CTAG | 5 cut(s) | 200, 626, 825, 1230, 1521 |
| BfmI | CTRYAG | 1 cut(s) | 432 |
| BfrI | CTTAAG | 1 cut(s) | 1040 |
| BisI | GCNGC | 4 cut(s) | 435, 630, 963, 966 |
| BlsI | GCNGC | 4 cut(s) | 436, 631, 964, 967 |
| BmcAI | AGTACT | 1 cut(s) | 1143 |
| Bme1390I | CCNGG | 1 cut(s) | 462 |
| BmgT120I | GGNCC | 2 cut(s) | 213, 760 |
| BmrFI | CCNGG | 1 cut(s) | 462 |
| BmsI | GCATC | 4 cut(s) | 342, 582, 864, 1169 |
| BpiI | GAAGAC | 1 cut(s) | 532 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 241, 273 |
| Bpu14I | TTCGAA | 1 cut(s) | 723 |
| BpuEI | CTTGAG | 1 cut(s) | 1394 |
| BpuMI | CCSGG | 1 cut(s) | 462 |
| BsaHI | GRCGYC | 1 cut(s) | 1169 |
| BsaI | GGTCTC | 3 cut(s) | 151, 1373, 1474 |
| BsaJI | CCNNGG | 3 cut(s) | 169, 460, 1338 |
| BsaWI | WCCGGW | 1 cut(s) | 1006 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 210 |
| Bse118I | RCCGGY | 1 cut(s) | 188 |
| Bse1I | ACTGG | 5 cut(s) | 63, 229, 599, 762, 1460 |
| Bse3DI | GCAATG | 4 cut(s) | 98, 915, 1032, 1172 |
| BseAI | TCCGGA | 1 cut(s) | 1006 |
| BseDI | CCNNGG | 3 cut(s) | 169, 460, 1338 |
| BseGI | GGATG | 1 cut(s) | 1241 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 210 |
| BseMI | GCAATG | 4 cut(s) | 98, 915, 1032, 1172 |
| BseMII | CTCAG | 3 cut(s) | 239, 558, 970 |
| BseNI | ACTGG | 5 cut(s) | 63, 229, 599, 762, 1460 |
| BseRI | GAGGAG | 1 cut(s) | 86 |
| BseSI | GKGCMC | 1 cut(s) | 594 |
| BseXI | GCAGC | 3 cut(s) | 446, 641, 952 |
| BseYI | CCCAGC | 1 cut(s) | 883 |
| Bsh1236I | CGCG | 1 cut(s) | 1130 |
| BshFI | GGCC | 4 cut(s) | 165, 215, 761, 954 |
| BsiHKAI | GWGCWC | 5 cut(s) | 259, 594, 622, 704, 1410 |
| BsiSI | CCGG | 3 cut(s) | 189, 462, 1007 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 210 |
| BsmAI | GTCTC | 3 cut(s) | 151, 1373, 1474 |
| BsmI | GAATGC | 1 cut(s) | 1027 |
| BsnI | GGCC | 4 cut(s) | 165, 215, 761, 954 |
| Bso31I | GGTCTC | 3 cut(s) | 151, 1373, 1474 |
| Bsp119I | TTCGAA | 1 cut(s) | 723 |
| Bsp1286I | GDGCHC | 5 cut(s) | 259, 594, 622, 704, 1410 |
| Bsp13I | TCCGGA | 1 cut(s) | 1006 |
| Bsp1407I | TGTACA | 1 cut(s) | 683 |
| Bsp143I | GATC | 4 cut(s) | 32, 135, 412, 456 |
| BspACI | CCGC | 2 cut(s) | 273, 963 |
| BspANI | GGCC | 4 cut(s) | 165, 215, 761, 954 |
| BspCNI | CTCAG | 3 cut(s) | 240, 557, 969 |
| BspEI | TCCGGA | 1 cut(s) | 1006 |
| BspFNI | CGCG | 1 cut(s) | 1130 |
| BspMAI | CTGCAG | 1 cut(s) | 436 |
| BspPI | GGATC | 4 cut(s) | 40, 130, 407, 451 |
| BspT104I | TTCGAA | 1 cut(s) | 723 |
| BspTI | CTTAAG | 1 cut(s) | 1040 |
| BspTNI | GGTCTC | 3 cut(s) | 151, 1373, 1474 |
| BsrDI | GCAATG | 4 cut(s) | 98, 915, 1032, 1172 |
| BsrFI | RCCGGY | 1 cut(s) | 188 |
| BsrGI | TGTACA | 1 cut(s) | 683 |
| BsrI | ACTGG | 5 cut(s) | 63, 229, 599, 762, 1460 |
| BssAI | RCCGGY | 1 cut(s) | 188 |
| BssECI | CCNNGG | 3 cut(s) | 169, 460, 1338 |
| BssMI | GATC | 4 cut(s) | 32, 135, 412, 456 |
| BssNI | GRCGYC | 1 cut(s) | 1169 |
| BssT1I | CCWWGG | 2 cut(s) | 169, 1338 |
| Bst4CI | ACNGT | 2 cut(s) | 676, 1405 |
| Bst6I | CTCTTC | 1 cut(s) | 353 |
| BstACI | GRCGYC | 1 cut(s) | 1169 |
| BstAFI | CTTAAG | 1 cut(s) | 1040 |
| BstAUI | TGTACA | 1 cut(s) | 683 |
| BstBI | TTCGAA | 1 cut(s) | 723 |
| BstDEI | CTNAG | 5 cut(s) | 248, 544, 956, 1017, 1252 |
| BstF5I | GGATG | 1 cut(s) | 1241 |
| BstFNI | CGCG | 1 cut(s) | 1130 |
| BstHHI | GCGC | 1 cut(s) | 194 |
| BstKTI | GATC | 4 cut(s) | 35, 138, 415, 459 |
| BstMAI | GTCTC | 3 cut(s) | 151, 1373, 1474 |
| BstMBI | GATC | 4 cut(s) | 32, 135, 412, 456 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 200, 279, 626, 699, 1022, 1051, 1136, 1383 |
| BstNSI | RCATGY | 1 cut(s) | 496 |
| BstSCI | CCNGG | 1 cut(s) | 460 |
| BstSFI | CTRYAG | 1 cut(s) | 432 |
| BstSLI | GKGCMC | 1 cut(s) | 594 |
| BstUI | CGCG | 1 cut(s) | 1130 |
| BstV1I | GCAGC | 3 cut(s) | 446, 641, 952 |
| BstV2I | GAAGAC | 1 cut(s) | 532 |
| BstX2I | RGATCY | 1 cut(s) | 412 |
| BstYI | RGATCY | 1 cut(s) | 412 |
| BsuRI | GGCC | 4 cut(s) | 165, 215, 761, 954 |
| BtsCI | GGATG | 1 cut(s) | 1241 |
| BtsI | GCAGTG | 1 cut(s) | 899 |
| BtsIMutI | CAGTG | 6 cut(s) | 552, 592, 672, 899, 964, 1410 |
| CfoI | GCGC | 1 cut(s) | 194 |
| Cfr10I | RCCGGY | 1 cut(s) | 188 |
| Cfr13I | GGNCC | 2 cut(s) | 213, 760 |
| CseI | GACGC | 1 cut(s) | 1177 |
| Csp6I | GTAC | 2 cut(s) | 684, 1142 |
| CviAII | CATG | 7 cut(s) | 154, 210, 493, 661, 705, 862, 940 |
| CviQI | GTAC | 2 cut(s) | 684, 1142 |
| DdeI | CTNAG | 5 cut(s) | 248, 544, 956, 1017, 1252 |
| DpnI | GATC | 4 cut(s) | 34, 137, 414, 458 |
| DpnII | GATC | 4 cut(s) | 32, 135, 412, 456 |
| DraI | TTTAAA | 1 cut(s) | 789 |
| EaeI | YGGCCR | 1 cut(s) | 163 |
| Eam1104I | CTCTTC | 1 cut(s) | 353 |
| EarI | CTCTTC | 1 cut(s) | 353 |
| Ecl136II | GAGCTC | 2 cut(s) | 257, 620 |
| Eco130I | CCWWGG | 2 cut(s) | 169, 1338 |
| Eco24I | GRGCYC | 2 cut(s) | 259, 622 |
| Eco31I | GGTCTC | 3 cut(s) | 151, 1373, 1474 |
| Eco32I | GATATC | 2 cut(s) | 363, 651 |
| Eco53kI | GAGCTC | 2 cut(s) | 257, 620 |
| Eco57I | CTGAAG | 4 cut(s) | 30, 164, 491, 618 |
| EcoICRI | GAGCTC | 2 cut(s) | 257, 620 |
| EcoRV | GATATC | 2 cut(s) | 363, 651 |
| EcoT14I | CCWWGG | 2 cut(s) | 169, 1338 |
| EcoT38I | GRGCYC | 2 cut(s) | 259, 622 |
| ErhI | CCWWGG | 2 cut(s) | 169, 1338 |
| FaeI | CATG | 7 cut(s) | 157, 213, 496, 664, 708, 865, 943 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 880, 912 |
| FatI | CATG | 7 cut(s) | 153, 209, 492, 660, 704, 861, 939 |
| FauI | CCCGC | 1 cut(s) | 266 |
| FauNDI | CATATG | 2 cut(s) | 580, 949 |
| FblI | GTMKAC | 2 cut(s) | 63, 1309 |
| Fnu4HI | GCNGC | 4 cut(s) | 435, 630, 963, 966 |
| FokI | GGATG | 1 cut(s) | 1248 |
| FriOI | GRGCYC | 2 cut(s) | 259, 622 |
| Fsp4HI | GCNGC | 4 cut(s) | 435, 630, 963, 966 |
| FspBI | CTAG | 5 cut(s) | 200, 626, 825, 1230, 1521 |
| GlaI | GCGC | 1 cut(s) | 193 |
| GluI | GCNGC | 4 cut(s) | 435, 630, 963, 966 |
| GsaI | CCCAGC | 1 cut(s) | 887 |
| HaeIII | GGCC | 4 cut(s) | 165, 215, 761, 954 |
| HapII | CCGG | 3 cut(s) | 189, 462, 1007 |
| HgaI | GACGC | 1 cut(s) | 1177 |
| HhaI | GCGC | 1 cut(s) | 194 |
| Hin1I | GRCGYC | 1 cut(s) | 1169 |
| Hin1II | CATG | 7 cut(s) | 157, 213, 496, 664, 708, 865, 943 |
| Hin6I | GCGC | 1 cut(s) | 192 |
| HinP1I | GCGC | 1 cut(s) | 192 |
| HindIII | AAGCTT | 1 cut(s) | 324 |
| HinfI | GANTC | 4 cut(s) | 725, 850, 1199, 1420 |
| HpaII | CCGG | 3 cut(s) | 189, 462, 1007 |
| HphI | GGTGA | 3 cut(s) | 106, 185, 398 |
| Hpy166II | GTNNAC | 4 cut(s) | 64, 592, 1267, 1310 |
| Hpy188I | TCNGA | 2 cut(s) | 510, 1429 |
| Hpy188III | TCNNGA | 6 cut(s) | 260, 358, 771, 1007, 1411, 1445 |
| Hpy8I | GTNNAC | 4 cut(s) | 64, 592, 1267, 1310 |
| HpyAV | CCTTC | 5 cut(s) | 5, 23, 36, 704, 773 |
| HpyCH4III | ACNGT | 2 cut(s) | 676, 1405 |
| HpyCH4IV | ACGT | 2 cut(s) | 66, 1277 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 200, 279, 626, 699, 1022, 1051, 1136, 1383 |
| HpyF3I | CTNAG | 5 cut(s) | 248, 544, 956, 1017, 1252 |
| HpySE526I | ACGT | 2 cut(s) | 66, 1277 |
| Hsp92I | GRCGYC | 1 cut(s) | 1169 |
| Hsp92II | CATG | 7 cut(s) | 157, 213, 496, 664, 708, 865, 943 |
| HspAI | GCGC | 1 cut(s) | 192 |
| Kpn2I | TCCGGA | 1 cut(s) | 1006 |
| KroI | GCCGGC | 1 cut(s) | 188 |
| KroNI | GCCGGC | 1 cut(s) | 190 |
| Kzo9I | GATC | 4 cut(s) | 32, 135, 412, 456 |
| LmnI | GCTCC | 4 cut(s) | 254, 617, 625, 995 |
| Lsp1109I | GCAGC | 3 cut(s) | 446, 641, 952 |
| LweI | GCATC | 4 cut(s) | 342, 582, 864, 1169 |
| MaeI | CTAG | 5 cut(s) | 200, 626, 825, 1230, 1521 |
| MaeII | ACGT | 2 cut(s) | 66, 1277 |
| MaeIII | GTNAC | 5 cut(s) | 220, 676, 935, 943, 1091 |
| MalI | GATC | 4 cut(s) | 34, 137, 414, 458 |
| MboI | GATC | 4 cut(s) | 32, 135, 412, 456 |
| MboII | GAAGA | 5 cut(s) | 38, 340, 497, 532, 1105 |
| MfeI | CAATTG | 2 cut(s) | 1299, 1473 |
| MflI | RGATCY | 1 cut(s) | 412 |
| MhlI | GDGCHC | 5 cut(s) | 259, 594, 622, 704, 1410 |
| MlsI | TGGCCA | 1 cut(s) | 165 |
| MluNI | TGGCCA | 1 cut(s) | 165 |
| MlyI | GAGTC | 1 cut(s) | 1414 |
| Mox20I | TGGCCA | 1 cut(s) | 165 |
| MroI | TCCGGA | 1 cut(s) | 1006 |
| MroNI | GCCGGC | 1 cut(s) | 188 |
| MroXI | GAANNNNTTC | 1 cut(s) | 895 |
| MscI | TGGCCA | 1 cut(s) | 165 |
| MseI | TTAA | 5 cut(s) | 612, 788, 1041, 1320, 1437 |
| MslI | CAYNNNNRTG | 2 cut(s) | 119, 171 |
| Msp20I | TGGCCA | 1 cut(s) | 165 |
| MspA1I | CMGCKG | 1 cut(s) | 965 |
| MspCI | CTTAAG | 1 cut(s) | 1040 |
| MspI | CCGG | 3 cut(s) | 189, 462, 1007 |
| MspR9I | CCNGG | 1 cut(s) | 462 |
| MunI | CAATTG | 2 cut(s) | 1299, 1473 |
| Mva1269I | GAATGC | 1 cut(s) | 1027 |
| MvnI | CGCG | 1 cut(s) | 1130 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 200, 279, 626, 699, 1022, 1051, 1136, 1383 |
| NaeI | GCCGGC | 1 cut(s) | 190 |
| NciI | CCSGG | 1 cut(s) | 462 |
| NdeI | CATATG | 2 cut(s) | 580, 949 |
| NdeII | GATC | 4 cut(s) | 32, 135, 412, 456 |
| NgoMIV | GCCGGC | 1 cut(s) | 188 |
| NlaIII | CATG | 7 cut(s) | 157, 213, 496, 664, 708, 865, 943 |
| NmuCI | GTSAC | 1 cut(s) | 1091 |
| NspI | RCATGY | 1 cut(s) | 496 |
| NspV | TTCGAA | 1 cut(s) | 723 |
| OliI | CACNNNNGTG | 2 cut(s) | 119, 171 |
| PciI | ACATGT | 1 cut(s) | 492 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 729 |
| PctI | GAATGC | 1 cut(s) | 1027 |
| PdiI | GCCGGC | 1 cut(s) | 190 |
| PdmI | GAANNNNTTC | 1 cut(s) | 895 |
| PfeI | GAWTC | 3 cut(s) | 725, 850, 1199 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 210 |
| PkrI | GCNGC | 4 cut(s) | 436, 631, 964, 967 |
| PleI | GAGTC | 1 cut(s) | 1414 |
| PpsI | GAGTC | 1 cut(s) | 1414 |
| PscI | ACATGT | 1 cut(s) | 492 |
| Psp124BI | GAGCTC | 2 cut(s) | 259, 622 |
| Psp1406I | AACGTT | 1 cut(s) | 1277 |
| PspFI | CCCAGC | 1 cut(s) | 883 |
| PspPI | GGNCC | 2 cut(s) | 213, 760 |
| PstI | CTGCAG | 1 cut(s) | 436 |
| PsuI | RGATCY | 1 cut(s) | 412 |
| RsaI | GTAC | 2 cut(s) | 685, 1143 |
| RsaNI | GTAC | 2 cut(s) | 684, 1142 |
| RseI | CAYNNNNRTG | 2 cut(s) | 119, 171 |
| SacI | GAGCTC | 2 cut(s) | 259, 622 |
| SaqAI | TTAA | 5 cut(s) | 612, 788, 1041, 1320, 1437 |
| SatI | GCNGC | 4 cut(s) | 435, 630, 963, 966 |
| Sau3AI | GATC | 4 cut(s) | 32, 135, 412, 456 |
| Sau96I | GGNCC | 2 cut(s) | 213, 760 |
| ScaI | AGTACT | 1 cut(s) | 1143 |
| SchI | GAGTC | 1 cut(s) | 1414 |
| ScrFI | CCNGG | 1 cut(s) | 462 |
| SduI | GDGCHC | 5 cut(s) | 259, 594, 622, 704, 1410 |
| SfaNI | GCATC | 4 cut(s) | 342, 582, 864, 1169 |
| SfcI | CTRYAG | 1 cut(s) | 432 |
| SfuI | TTCGAA | 1 cut(s) | 723 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 119, 171 |
| SmlI | CTYRAG | 2 cut(s) | 1040, 1409 |
| SmoI | CTYRAG | 2 cut(s) | 1040, 1409 |
| SsiI | CCGC | 2 cut(s) | 273, 963 |
| SspMI | CTAG | 5 cut(s) | 200, 626, 825, 1230, 1521 |
| SstI | GAGCTC | 2 cut(s) | 259, 622 |
| StyD4I | CCNGG | 1 cut(s) | 460 |
| StyI | CCWWGG | 2 cut(s) | 169, 1338 |
| TaaI | ACNGT | 2 cut(s) | 676, 1405 |
| TaiI | ACGT | 2 cut(s) | 69, 1280 |
| TaqI | TCGA | 3 cut(s) | 341, 723, 732 |
| TaqII | GACCGA | 1 cut(s) | 139 |
| TatI | WGTACW | 2 cut(s) | 683, 1141 |
| TauI | GCSGC | 1 cut(s) | 965 |
| TfiI | GAWTC | 3 cut(s) | 725, 850, 1199 |
| Tru1I | TTAA | 5 cut(s) | 612, 788, 1041, 1320, 1437 |
| Tru9I | TTAA | 5 cut(s) | 612, 788, 1041, 1320, 1437 |
| TscAI | CASTG | 6 cut(s) | 552, 599, 679, 906, 964, 1410 |
| TseFI | GTSAC | 1 cut(s) | 1091 |
| TseI | GCWGC | 3 cut(s) | 434, 629, 965 |
| Tsp45I | GTSAC | 1 cut(s) | 1091 |
| TspDTI | ATGAA | 8 cut(s) | 87, 198, 554, 708, 805, 850, 1002, 1105 |
| TspRI | CASTG | 6 cut(s) | 552, 599, 679, 906, 964, 1410 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 210 |
| Vha464I | CTTAAG | 1 cut(s) | 1040 |
| VneI | GTGCAC | 1 cut(s) | 590 |
| XapI | RAATTY | 4 cut(s) | 312, 420, 449, 797 |
| XceI | RCATGY | 1 cut(s) | 496 |
| XmiI | GTMKAC | 2 cut(s) | 63, 1309 |
| XmnI | GAANNNNTTC | 1 cut(s) | 895 |
| XspI | CTAG | 5 cut(s) | 200, 626, 825, 1230, 1521 |
| ZrmI | AGTACT | 1 cut(s) | 1143 |