MATE efflux family protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 249 |
| AccII | CGCG | 2 cut(s) | 1127, 1136 |
| AccIII | TCCGGA | 1 cut(s) | 1003 |
| AciI | CCGC | 3 cut(s) | 312, 960, 1136 |
| AclI | AACGTT | 1 cut(s) | 344 |
| AclWI | GGATC | 4 cut(s) | 79, 169, 446, 490 |
| AcoI | YGGCCR | 1 cut(s) | 202 |
| AcsI | RAATTY | 2 cut(s) | 351, 488 |
| AcuI | CTGAAG | 3 cut(s) | 203, 530, 657 |
| AfaI | GTAC | 3 cut(s) | 724, 1140, 1259 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 249 |
| AflII | CTTAAG | 1 cut(s) | 1037 |
| AflIII | ACRYGT | 1 cut(s) | 531 |
| AgsI | TTSAA | 9 cut(s) | 8, 15, 302, 465, 487, 793, 1185, 1205, 1324 |
| AleI | CACNNNNGTG | 3 cut(s) | 158, 210, 974 |
| AluBI | AGCT | 9 cut(s) | 217, 227, 296, 365, 659, 671, 732, 1013, 1042 |
| AluI | AGCT | 9 cut(s) | 217, 227, 296, 365, 659, 671, 732, 1013, 1042 |
| Alw21I | GWGCWC | 3 cut(s) | 298, 661, 743 |
| Alw26I | GTCTC | 3 cut(s) | 190, 1370, 1471 |
| AlwI | GGATC | 4 cut(s) | 79, 169, 446, 490 |
| Aor13HI | TCCGGA | 1 cut(s) | 1003 |
| AoxI | GGCC | 5 cut(s) | 114, 202, 252, 798, 949 |
| ApeKI | GCWGC | 3 cut(s) | 473, 668, 962 |
| ApoI | RAATTY | 2 cut(s) | 351, 488 |
| AspLEI | GCGC | 1 cut(s) | 233 |
| AspS9I | GGNCC | 2 cut(s) | 252, 799 |
| AsuC2I | CCSGG | 1 cut(s) | 501 |
| AsuHPI | GGTGA | 3 cut(s) | 145, 224, 437 |
| AsuII | TTCGAA | 1 cut(s) | 762 |
| BalI | TGGCCA | 1 cut(s) | 204 |
| BanII | GRGCYC | 2 cut(s) | 298, 661 |
| BbsI | GAAGAC | 1 cut(s) | 571 |
| Bbv12I | GWGCWC | 3 cut(s) | 298, 661, 743 |
| BbvI | GCAGC | 3 cut(s) | 485, 680, 949 |
| BceAI | ACGGC | 1 cut(s) | 36 |
| BcnI | CCSGG | 1 cut(s) | 501 |
| BcoDI | GTCTC | 3 cut(s) | 190, 1370, 1471 |
| BfaI | CTAG | 3 cut(s) | 239, 665, 1227 |
| BfmI | CTRYAG | 1 cut(s) | 471 |
| BfrI | CTTAAG | 1 cut(s) | 1037 |
| BisI | GCNGC | 4 cut(s) | 474, 669, 960, 963 |
| BlsI | GCNGC | 4 cut(s) | 475, 670, 961, 964 |
| Bme1390I | CCNGG | 1 cut(s) | 501 |
| BmgT120I | GGNCC | 2 cut(s) | 252, 799 |
| BmrFI | CCNGG | 1 cut(s) | 501 |
| BmsI | GCATC | 4 cut(s) | 381, 621, 861, 1166 |
| BpiI | GAAGAC | 1 cut(s) | 571 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 280, 312 |
| Bpu14I | TTCGAA | 1 cut(s) | 762 |
| BpuEI | CTTGAG | 1 cut(s) | 1391 |
| BpuMI | CCSGG | 1 cut(s) | 501 |
| BsaAI | YACGTR | 1 cut(s) | 1261 |
| BsaI | GGTCTC | 3 cut(s) | 190, 1370, 1471 |
| BsaJI | CCNNGG | 4 cut(s) | 52, 208, 499, 1335 |
| BsaWI | WCCGGW | 1 cut(s) | 1003 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 249 |
| Bse1I | ACTGG | 5 cut(s) | 102, 268, 801, 1457, 1518 |
| Bse3DI | GCAATG | 4 cut(s) | 137, 1029, 1169, 1400 |
| BseAI | TCCGGA | 1 cut(s) | 1003 |
| BseDI | CCNNGG | 4 cut(s) | 52, 208, 499, 1335 |
| BseGI | GGATG | 1 cut(s) | 1238 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 249 |
| BseMI | GCAATG | 4 cut(s) | 137, 1029, 1169, 1400 |
| BseMII | CTCAG | 4 cut(s) | 278, 597, 894, 967 |
| BseNI | ACTGG | 5 cut(s) | 102, 268, 801, 1457, 1518 |
| BseRI | GAGGAG | 1 cut(s) | 125 |
| BseXI | GCAGC | 3 cut(s) | 485, 680, 949 |
| Bsh1236I | CGCG | 2 cut(s) | 1127, 1136 |
| BshFI | GGCC | 5 cut(s) | 116, 204, 254, 800, 951 |
| BsiHKAI | GWGCWC | 3 cut(s) | 298, 661, 743 |
| BsiSI | CCGG | 2 cut(s) | 501, 1004 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 249 |
| BsmAI | GTCTC | 3 cut(s) | 190, 1370, 1471 |
| BsmI | GAATGC | 1 cut(s) | 1024 |
| BsnI | GGCC | 5 cut(s) | 116, 204, 254, 800, 951 |
| Bso31I | GGTCTC | 3 cut(s) | 190, 1370, 1471 |
| Bsp119I | TTCGAA | 1 cut(s) | 762 |
| Bsp1286I | GDGCHC | 3 cut(s) | 298, 661, 743 |
| Bsp13I | TCCGGA | 1 cut(s) | 1003 |
| Bsp1407I | TGTACA | 1 cut(s) | 722 |
| Bsp143I | GATC | 4 cut(s) | 71, 174, 451, 495 |
| BspACI | CCGC | 3 cut(s) | 312, 960, 1136 |
| BspANI | GGCC | 5 cut(s) | 116, 204, 254, 800, 951 |
| BspCNI | CTCAG | 4 cut(s) | 279, 596, 893, 966 |
| BspEI | TCCGGA | 1 cut(s) | 1003 |
| BspFNI | CGCG | 2 cut(s) | 1127, 1136 |
| BspMAI | CTGCAG | 1 cut(s) | 475 |
| BspPI | GGATC | 4 cut(s) | 79, 169, 446, 490 |
| BspT104I | TTCGAA | 1 cut(s) | 762 |
| BspTI | CTTAAG | 1 cut(s) | 1037 |
| BspTNI | GGTCTC | 3 cut(s) | 190, 1370, 1471 |
| BsrDI | GCAATG | 4 cut(s) | 137, 1029, 1169, 1400 |
| BsrGI | TGTACA | 1 cut(s) | 722 |
| BsrI | ACTGG | 5 cut(s) | 102, 268, 801, 1457, 1518 |
| BssECI | CCNNGG | 4 cut(s) | 52, 208, 499, 1335 |
| BssMI | GATC | 4 cut(s) | 71, 174, 451, 495 |
| BssT1I | CCWWGG | 2 cut(s) | 208, 1335 |
| Bst4CI | ACNGT | 1 cut(s) | 715 |
| Bst6I | CTCTTC | 1 cut(s) | 392 |
| BstAFI | CTTAAG | 1 cut(s) | 1037 |
| BstAUI | TGTACA | 1 cut(s) | 722 |
| BstBAI | YACGTR | 1 cut(s) | 1261 |
| BstBI | TTCGAA | 1 cut(s) | 762 |
| BstDEI | CTNAG | 6 cut(s) | 287, 583, 880, 953, 1014, 1249 |
| BstDSI | CCRYGG | 1 cut(s) | 52 |
| BstF5I | GGATG | 1 cut(s) | 1238 |
| BstFNI | CGCG | 2 cut(s) | 1127, 1136 |
| BstHHI | GCGC | 1 cut(s) | 233 |
| BstKTI | GATC | 4 cut(s) | 74, 177, 454, 498 |
| BstMAI | GTCTC | 3 cut(s) | 190, 1370, 1471 |
| BstMBI | GATC | 4 cut(s) | 71, 174, 451, 495 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 239, 318, 665, 738, 1019, 1048, 1133, 1380 |
| BstNSI | RCATGY | 1 cut(s) | 535 |
| BstSCI | CCNGG | 1 cut(s) | 499 |
| BstSFI | CTRYAG | 1 cut(s) | 471 |
| BstSNI | TACGTA | 1 cut(s) | 1261 |
| BstUI | CGCG | 2 cut(s) | 1127, 1136 |
| BstV1I | GCAGC | 3 cut(s) | 485, 680, 949 |
| BstV2I | GAAGAC | 1 cut(s) | 571 |
| BstX2I | RGATCY | 1 cut(s) | 451 |
| BstYI | RGATCY | 1 cut(s) | 451 |
| BsuRI | GGCC | 5 cut(s) | 116, 204, 254, 800, 951 |
| BtgI | CCRYGG | 1 cut(s) | 52 |
| BtsCI | GGATG | 1 cut(s) | 1238 |
| BtsI | GCAGTG | 1 cut(s) | 896 |
| BtsIMutI | CAGTG | 4 cut(s) | 591, 711, 896, 961 |
| CfoI | GCGC | 1 cut(s) | 233 |
| Cfr13I | GGNCC | 2 cut(s) | 252, 799 |
| Csp6I | GTAC | 3 cut(s) | 723, 1139, 1258 |
| CviAII | CATG | 8 cut(s) | 193, 249, 532, 700, 744, 859, 907, 937 |
| CviQI | GTAC | 3 cut(s) | 723, 1139, 1258 |
| DdeI | CTNAG | 6 cut(s) | 287, 583, 880, 953, 1014, 1249 |
| DpnI | GATC | 4 cut(s) | 73, 176, 453, 497 |
| DpnII | GATC | 4 cut(s) | 71, 174, 451, 495 |
| EaeI | YGGCCR | 1 cut(s) | 202 |
| Eam1104I | CTCTTC | 1 cut(s) | 392 |
| EarI | CTCTTC | 1 cut(s) | 392 |
| Ecl136II | GAGCTC | 2 cut(s) | 296, 659 |
| Eco105I | TACGTA | 1 cut(s) | 1261 |
| Eco130I | CCWWGG | 2 cut(s) | 208, 1335 |
| Eco24I | GRGCYC | 2 cut(s) | 298, 661 |
| Eco31I | GGTCTC | 3 cut(s) | 190, 1370, 1471 |
| Eco32I | GATATC | 2 cut(s) | 402, 690 |
| Eco53kI | GAGCTC | 2 cut(s) | 296, 659 |
| Eco57I | CTGAAG | 3 cut(s) | 203, 530, 657 |
| EcoICRI | GAGCTC | 2 cut(s) | 296, 659 |
| EcoRV | GATATC | 2 cut(s) | 402, 690 |
| EcoT14I | CCWWGG | 2 cut(s) | 208, 1335 |
| EcoT38I | GRGCYC | 2 cut(s) | 298, 661 |
| ErhI | CCWWGG | 2 cut(s) | 208, 1335 |
| FaeI | CATG | 8 cut(s) | 196, 252, 535, 703, 747, 862, 910, 940 |
| FatI | CATG | 8 cut(s) | 192, 248, 531, 699, 743, 858, 906, 936 |
| FauI | CCCGC | 1 cut(s) | 305 |
| FauNDI | CATATG | 2 cut(s) | 619, 946 |
| Fnu4HI | GCNGC | 4 cut(s) | 474, 669, 960, 963 |
| FokI | GGATG | 1 cut(s) | 1245 |
| FriOI | GRGCYC | 2 cut(s) | 298, 661 |
| Fsp4HI | GCNGC | 4 cut(s) | 474, 669, 960, 963 |
| FspBI | CTAG | 3 cut(s) | 239, 665, 1227 |
| GlaI | GCGC | 1 cut(s) | 232 |
| GluI | GCNGC | 4 cut(s) | 474, 669, 960, 963 |
| HaeIII | GGCC | 5 cut(s) | 116, 204, 254, 800, 951 |
| HapII | CCGG | 2 cut(s) | 501, 1004 |
| HhaI | GCGC | 1 cut(s) | 233 |
| Hin1II | CATG | 8 cut(s) | 196, 252, 535, 703, 747, 862, 910, 940 |
| Hin6I | GCGC | 1 cut(s) | 231 |
| HinP1I | GCGC | 1 cut(s) | 231 |
| HindIII | AAGCTT | 1 cut(s) | 363 |
| HinfI | GANTC | 5 cut(s) | 425, 764, 847, 1196, 1417 |
| HpaII | CCGG | 2 cut(s) | 501, 1004 |
| HphI | GGTGA | 3 cut(s) | 145, 224, 437 |
| Hpy166II | GTNNAC | 2 cut(s) | 1258, 1264 |
| Hpy188I | TCNGA | 2 cut(s) | 549, 1426 |
| Hpy188III | TCNNGA | 5 cut(s) | 299, 397, 1004, 1408, 1442 |
| Hpy8I | GTNNAC | 2 cut(s) | 1258, 1264 |
| HpyAV | CCTTC | 4 cut(s) | 62, 75, 743, 812 |
| HpyCH4III | ACNGT | 1 cut(s) | 715 |
| HpyCH4IV | ACGT | 2 cut(s) | 344, 1260 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 239, 318, 665, 738, 1019, 1048, 1133, 1380 |
| HpyF3I | CTNAG | 6 cut(s) | 287, 583, 880, 953, 1014, 1249 |
| HpySE526I | ACGT | 2 cut(s) | 344, 1260 |
| Hsp92II | CATG | 8 cut(s) | 196, 252, 535, 703, 747, 862, 910, 940 |
| HspAI | GCGC | 1 cut(s) | 231 |
| Kpn2I | TCCGGA | 1 cut(s) | 1003 |
| Kzo9I | GATC | 4 cut(s) | 71, 174, 451, 495 |
| LmnI | GCTCC | 4 cut(s) | 293, 656, 664, 992 |
| Lsp1109I | GCAGC | 3 cut(s) | 485, 680, 949 |
| LweI | GCATC | 4 cut(s) | 381, 621, 861, 1166 |
| MaeI | CTAG | 3 cut(s) | 239, 665, 1227 |
| MaeII | ACGT | 2 cut(s) | 344, 1260 |
| MaeIII | GTNAC | 5 cut(s) | 259, 565, 932, 940, 1088 |
| MalI | GATC | 4 cut(s) | 73, 176, 453, 497 |
| MboI | GATC | 4 cut(s) | 71, 174, 451, 495 |
| MboII | GAAGA | 5 cut(s) | 77, 379, 536, 571, 1102 |
| MfeI | CAATTG | 3 cut(s) | 30, 1296, 1470 |
| MflI | RGATCY | 1 cut(s) | 451 |
| MhlI | GDGCHC | 3 cut(s) | 298, 661, 743 |
| MlsI | TGGCCA | 1 cut(s) | 204 |
| MluNI | TGGCCA | 1 cut(s) | 204 |
| MlyI | GAGTC | 2 cut(s) | 434, 1411 |
| Mox20I | TGGCCA | 1 cut(s) | 204 |
| MroI | TCCGGA | 1 cut(s) | 1003 |
| MscI | TGGCCA | 1 cut(s) | 204 |
| MseI | TTAA | 5 cut(s) | 651, 717, 1038, 1317, 1434 |
| MslI | CAYNNNNRTG | 4 cut(s) | 158, 210, 911, 974 |
| Msp20I | TGGCCA | 1 cut(s) | 204 |
| MspA1I | CMGCKG | 1 cut(s) | 962 |
| MspCI | CTTAAG | 1 cut(s) | 1037 |
| MspI | CCGG | 2 cut(s) | 501, 1004 |
| MspR9I | CCNGG | 1 cut(s) | 501 |
| MunI | CAATTG | 3 cut(s) | 30, 1296, 1470 |
| Mva1269I | GAATGC | 1 cut(s) | 1024 |
| MvnI | CGCG | 2 cut(s) | 1127, 1136 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 239, 318, 665, 738, 1019, 1048, 1133, 1380 |
| NciI | CCSGG | 1 cut(s) | 501 |
| NdeI | CATATG | 2 cut(s) | 619, 946 |
| NdeII | GATC | 4 cut(s) | 71, 174, 451, 495 |
| NlaIII | CATG | 8 cut(s) | 196, 252, 535, 703, 747, 862, 910, 940 |
| NmuCI | GTSAC | 1 cut(s) | 1088 |
| NspI | RCATGY | 1 cut(s) | 535 |
| NspV | TTCGAA | 1 cut(s) | 762 |
| OliI | CACNNNNGTG | 3 cut(s) | 158, 210, 974 |
| PciI | ACATGT | 1 cut(s) | 531 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 768 |
| PctI | GAATGC | 1 cut(s) | 1024 |
| PfeI | GAWTC | 3 cut(s) | 764, 847, 1196 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 249 |
| PkrI | GCNGC | 4 cut(s) | 475, 670, 961, 964 |
| PleI | GAGTC | 2 cut(s) | 433, 1411 |
| PpsI | GAGTC | 2 cut(s) | 433, 1411 |
| Ppu21I | YACGTR | 1 cut(s) | 1261 |
| PscI | ACATGT | 1 cut(s) | 531 |
| Psp124BI | GAGCTC | 2 cut(s) | 298, 661 |
| Psp1406I | AACGTT | 1 cut(s) | 344 |
| PspPI | GGNCC | 2 cut(s) | 252, 799 |
| PstI | CTGCAG | 1 cut(s) | 475 |
| PsuI | RGATCY | 1 cut(s) | 451 |
| RsaI | GTAC | 3 cut(s) | 724, 1140, 1259 |
| RsaNI | GTAC | 3 cut(s) | 723, 1139, 1258 |
| RseI | CAYNNNNRTG | 4 cut(s) | 158, 210, 911, 974 |
| SacI | GAGCTC | 2 cut(s) | 298, 661 |
| SaqAI | TTAA | 5 cut(s) | 651, 717, 1038, 1317, 1434 |
| SatI | GCNGC | 4 cut(s) | 474, 669, 960, 963 |
| Sau3AI | GATC | 4 cut(s) | 71, 174, 451, 495 |
| Sau96I | GGNCC | 2 cut(s) | 252, 799 |
| SchI | GAGTC | 2 cut(s) | 434, 1411 |
| ScrFI | CCNGG | 1 cut(s) | 501 |
| SduI | GDGCHC | 3 cut(s) | 298, 661, 743 |
| SfaNI | GCATC | 4 cut(s) | 381, 621, 861, 1166 |
| SfcI | CTRYAG | 1 cut(s) | 471 |
| SfuI | TTCGAA | 1 cut(s) | 762 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 158, 210, 911, 974 |
| SmlI | CTYRAG | 2 cut(s) | 1037, 1406 |
| SmoI | CTYRAG | 2 cut(s) | 1037, 1406 |
| SnaBI | TACGTA | 1 cut(s) | 1261 |
| SsiI | CCGC | 3 cut(s) | 312, 960, 1136 |
| SspMI | CTAG | 3 cut(s) | 239, 665, 1227 |
| SstI | GAGCTC | 2 cut(s) | 298, 661 |
| StyD4I | CCNGG | 1 cut(s) | 499 |
| StyI | CCWWGG | 2 cut(s) | 208, 1335 |
| TaaI | ACNGT | 1 cut(s) | 715 |
| TaiI | ACGT | 2 cut(s) | 347, 1263 |
| TaqI | TCGA | 3 cut(s) | 380, 762, 771 |
| TaqII | GACCGA | 1 cut(s) | 178 |
| TatI | WGTACW | 1 cut(s) | 722 |
| TauI | GCSGC | 1 cut(s) | 962 |
| TfiI | GAWTC | 3 cut(s) | 764, 847, 1196 |
| Tru1I | TTAA | 5 cut(s) | 651, 717, 1038, 1317, 1434 |
| Tru9I | TTAA | 5 cut(s) | 651, 717, 1038, 1317, 1434 |
| TscAI | CASTG | 4 cut(s) | 591, 718, 903, 961 |
| TseFI | GTSAC | 1 cut(s) | 1088 |
| TseI | GCWGC | 3 cut(s) | 473, 668, 962 |
| Tsp45I | GTSAC | 1 cut(s) | 1088 |
| TspDTI | ATGAA | 7 cut(s) | 126, 237, 593, 747, 847, 999, 1102 |
| TspRI | CASTG | 4 cut(s) | 591, 718, 903, 961 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 249 |
| Vha464I | CTTAAG | 1 cut(s) | 1037 |
| XapI | RAATTY | 2 cut(s) | 351, 488 |
| XceI | RCATGY | 1 cut(s) | 535 |
| XspI | CTAG | 3 cut(s) | 239, 665, 1227 |