MATE efflux family protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 44 |
| Acc36I | ACCTGC | 1 cut(s) | 44 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 264 |
| AccI | GTMKAC | 1 cut(s) | 434 |
| AclWI | GGATC | 1 cut(s) | 461 |
| AcoI | YGGCCR | 2 cut(s) | 217, 255 |
| AcsI | RAATTY | 2 cut(s) | 503, 745 |
| AcuI | CTGAAG | 2 cut(s) | 545, 672 |
| AdeI | CACNNNGTG | 1 cut(s) | 326 |
| AfaI | GTAC | 3 cut(s) | 645, 985, 1155 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 242, 264 |
| AflII | CTTAAG | 1 cut(s) | 1052 |
| AflIII | ACRYGT | 1 cut(s) | 98 |
| AgsI | TTSAA | 6 cut(s) | 502, 667, 808, 1143, 1200, 1339 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1101 |
| AjnI | CCWGG | 1 cut(s) | 1018 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 164, 196 |
| AleI | CACNNNNGTG | 2 cut(s) | 197, 225 |
| Alw21I | GWGCWC | 2 cut(s) | 313, 676 |
| Alw26I | GTCTC | 3 cut(s) | 311, 1385, 1526 |
| AlwI | GGATC | 1 cut(s) | 461 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 25 |
| AoxI | GGCC | 7 cut(s) | 70, 217, 255, 267, 532, 720, 964 |
| ApeKI | GCWGC | 3 cut(s) | 488, 683, 1258 |
| ApoI | RAATTY | 2 cut(s) | 503, 745 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 907 |
| AspS9I | GGNCC | 1 cut(s) | 267 |
| AsuC2I | CCSGG | 1 cut(s) | 516 |
| AsuHPI | GGTGA | 2 cut(s) | 160, 239 |
| BaeGI | GKGCMC | 1 cut(s) | 1120 |
| BalI | TGGCCA | 2 cut(s) | 219, 257 |
| BanII | GRGCYC | 2 cut(s) | 313, 676 |
| BbsI | GAAGAC | 2 cut(s) | 586, 1313 |
| Bbv12I | GWGCWC | 2 cut(s) | 313, 676 |
| BbvI | GCAGC | 3 cut(s) | 500, 695, 1270 |
| BccI | CCATC | 4 cut(s) | 419, 468, 581, 635 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 17, 51 |
| BciT130I | CCWGG | 1 cut(s) | 1020 |
| BclI | TGATCA | 1 cut(s) | 189 |
| BcnI | CCSGG | 1 cut(s) | 516 |
| BcoDI | GTCTC | 3 cut(s) | 311, 1385, 1526 |
| BfaI | CTAG | 6 cut(s) | 50, 680, 981, 1482, 1625, 1629 |
| BfmI | CTRYAG | 1 cut(s) | 486 |
| BfrI | CTTAAG | 1 cut(s) | 1052 |
| BfuAI | ACCTGC | 1 cut(s) | 44 |
| BisI | GCNGC | 3 cut(s) | 489, 684, 1259 |
| BlsI | GCNGC | 3 cut(s) | 490, 685, 1260 |
| BmcAI | AGTACT | 1 cut(s) | 1155 |
| Bme1390I | CCNGG | 2 cut(s) | 516, 1020 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1101 |
| BmgT120I | GGNCC | 1 cut(s) | 267 |
| BmiI | GGNNCC | 2 cut(s) | 1479, 1622 |
| BmrFI | CCNGG | 2 cut(s) | 516, 1020 |
| BmsI | GCATC | 1 cut(s) | 876 |
| BpiI | GAAGAC | 2 cut(s) | 586, 1313 |
| Bpu10I | CCTNAGC | 2 cut(s) | 132, 238 |
| BpuEI | CTTGAG | 4 cut(s) | 335, 571, 1406, 1547 |
| BpuMI | CCSGG | 1 cut(s) | 516 |
| BsaI | GGTCTC | 2 cut(s) | 1385, 1526 |
| BsaJI | CCNNGG | 5 cut(s) | 73, 223, 252, 1018, 1350 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 242, 264 |
| Bse1I | ACTGG | 2 cut(s) | 19, 805 |
| Bse3DI | GCAATG | 2 cut(s) | 927, 1044 |
| BseBI | CCWGG | 1 cut(s) | 1020 |
| BseDI | CCNNGG | 5 cut(s) | 73, 223, 252, 1018, 1350 |
| BseGI | GGATG | 1 cut(s) | 1253 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 242, 264 |
| BseMI | GCAATG | 2 cut(s) | 927, 1044 |
| BseMII | CTCAG | 1 cut(s) | 982 |
| BseNI | ACTGG | 2 cut(s) | 19, 805 |
| BseRI | GAGGAG | 2 cut(s) | 140, 860 |
| BseSI | GKGCMC | 1 cut(s) | 1120 |
| BseXI | GCAGC | 3 cut(s) | 500, 695, 1270 |
| BshFI | GGCC | 7 cut(s) | 72, 219, 257, 269, 534, 722, 966 |
| BsiHKAI | GWGCWC | 2 cut(s) | 313, 676 |
| BsiSI | CCGG | 1 cut(s) | 516 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 242, 264 |
| BsmAI | GTCTC | 3 cut(s) | 311, 1385, 1526 |
| BsmI | GAATGC | 1 cut(s) | 1039 |
| BsnI | GGCC | 7 cut(s) | 72, 219, 257, 269, 534, 722, 966 |
| Bso31I | GGTCTC | 2 cut(s) | 1385, 1526 |
| Bsp1286I | GDGCHC | 3 cut(s) | 313, 676, 1120 |
| Bsp143I | GATC | 3 cut(s) | 189, 466, 603 |
| Bsp19I | CCATGG | 1 cut(s) | 73 |
| BspANI | GGCC | 7 cut(s) | 72, 219, 257, 269, 534, 722, 966 |
| BspCNI | CTCAG | 1 cut(s) | 981 |
| BspHI | TCATGA | 1 cut(s) | 795 |
| BspLI | GGNNCC | 2 cut(s) | 1479, 1622 |
| BspMAI | CTGCAG | 1 cut(s) | 490 |
| BspMI | ACCTGC | 1 cut(s) | 44 |
| BspPI | GGATC | 1 cut(s) | 461 |
| BspTI | CTTAAG | 1 cut(s) | 1052 |
| BspTNI | GGTCTC | 2 cut(s) | 1385, 1526 |
| BsrDI | GCAATG | 2 cut(s) | 927, 1044 |
| BsrI | ACTGG | 2 cut(s) | 19, 805 |
| BssECI | CCNNGG | 5 cut(s) | 73, 223, 252, 1018, 1350 |
| BssMI | GATC | 3 cut(s) | 189, 466, 603 |
| BssNAI | GTATAC | 1 cut(s) | 435 |
| BssT1I | CCWWGG | 4 cut(s) | 73, 223, 252, 1350 |
| Bst1107I | GTATAC | 1 cut(s) | 435 |
| Bst2UI | CCWGG | 1 cut(s) | 1020 |
| Bst4CI | ACNGT | 2 cut(s) | 1404, 1545 |
| Bst6I | CTCTTC | 1 cut(s) | 1388 |
| BstAFI | CTTAAG | 1 cut(s) | 1052 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 485, 1034 |
| BstC8I | GCNNGC | 6 cut(s) | 159, 217, 1012, 1120, 1396, 1537 |
| BstDEI | CTNAG | 3 cut(s) | 132, 238, 968 |
| BstDSI | CCRYGG | 1 cut(s) | 73 |
| BstF5I | GGATG | 1 cut(s) | 1253 |
| BstKTI | GATC | 3 cut(s) | 192, 469, 606 |
| BstMAI | GTCTC | 3 cut(s) | 311, 1385, 1526 |
| BstMBI | GATC | 3 cut(s) | 189, 466, 603 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 254, 485, 680, 1034 |
| BstNI | CCWGG | 1 cut(s) | 1020 |
| BstNSI | RCATGY | 1 cut(s) | 102 |
| BstSCI | CCNGG | 2 cut(s) | 514, 1018 |
| BstSFI | CTRYAG | 1 cut(s) | 486 |
| BstSLI | GKGCMC | 1 cut(s) | 1120 |
| BstV1I | GCAGC | 3 cut(s) | 500, 695, 1270 |
| BstV2I | GAAGAC | 2 cut(s) | 586, 1313 |
| BstX2I | RGATCY | 1 cut(s) | 466 |
| BstYI | RGATCY | 1 cut(s) | 466 |
| BstZ17I | GTATAC | 1 cut(s) | 435 |
| BsuRI | GGCC | 7 cut(s) | 72, 219, 257, 269, 534, 722, 966 |
| BtgI | CCRYGG | 1 cut(s) | 73 |
| BtsCI | GGATG | 1 cut(s) | 1253 |
| BtsIMutI | CAGTG | 4 cut(s) | 976, 1061, 1400, 1541 |
| BveI | ACCTGC | 1 cut(s) | 44 |
| Cac8I | GCNNGC | 6 cut(s) | 159, 217, 1012, 1120, 1396, 1537 |
| CaiI | CAGNNNCTG | 1 cut(s) | 25 |
| CciI | TCATGA | 1 cut(s) | 795 |
| Cfr13I | GGNCC | 1 cut(s) | 267 |
| Csp6I | GTAC | 3 cut(s) | 644, 984, 1154 |
| CviQI | GTAC | 3 cut(s) | 644, 984, 1154 |
| DdeI | CTNAG | 3 cut(s) | 132, 238, 968 |
| DpnI | GATC | 3 cut(s) | 191, 468, 605 |
| DpnII | GATC | 3 cut(s) | 189, 466, 603 |
| DraIII | CACNNNGTG | 1 cut(s) | 326 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1101 |
| EaeI | YGGCCR | 2 cut(s) | 217, 255 |
| Eam1104I | CTCTTC | 1 cut(s) | 1388 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1101 |
| EarI | CTCTTC | 1 cut(s) | 1388 |
| Ecl136II | GAGCTC | 2 cut(s) | 311, 674 |
| Eco130I | CCWWGG | 4 cut(s) | 73, 223, 252, 1350 |
| Eco24I | GRGCYC | 2 cut(s) | 313, 676 |
| Eco31I | GGTCTC | 2 cut(s) | 1385, 1526 |
| Eco32I | GATATC | 1 cut(s) | 705 |
| Eco53kI | GAGCTC | 2 cut(s) | 311, 674 |
| Eco57I | CTGAAG | 2 cut(s) | 545, 672 |
| EcoICRI | GAGCTC | 2 cut(s) | 311, 674 |
| EcoRII | CCWGG | 1 cut(s) | 1018 |
| EcoRV | GATATC | 1 cut(s) | 705 |
| EcoT14I | CCWWGG | 4 cut(s) | 73, 223, 252, 1350 |
| EcoT38I | GRGCYC | 2 cut(s) | 313, 676 |
| ErhI | CCWWGG | 4 cut(s) | 73, 223, 252, 1350 |
| FauNDI | CATATG | 2 cut(s) | 529, 961 |
| FbaI | TGATCA | 1 cut(s) | 189 |
| FblI | GTMKAC | 1 cut(s) | 434 |
| Fnu4HI | GCNGC | 3 cut(s) | 489, 684, 1259 |
| FokI | GGATG | 1 cut(s) | 1260 |
| FriOI | GRGCYC | 2 cut(s) | 313, 676 |
| Fsp4HI | GCNGC | 3 cut(s) | 489, 684, 1259 |
| FspBI | CTAG | 6 cut(s) | 50, 680, 981, 1482, 1625, 1629 |
| GluI | GCNGC | 3 cut(s) | 489, 684, 1259 |
| HaeIII | GGCC | 7 cut(s) | 72, 219, 257, 269, 534, 722, 966 |
| HapII | CCGG | 1 cut(s) | 516 |
| HincII | GTYRAC | 1 cut(s) | 61 |
| HindII | GTYRAC | 1 cut(s) | 61 |
| HindIII | AAGCTT | 1 cut(s) | 378 |
| HinfI | GANTC | 5 cut(s) | 555, 862, 1048, 1066, 1211 |
| HpaII | CCGG | 1 cut(s) | 516 |
| HphI | GGTGA | 2 cut(s) | 160, 239 |
| Hpy166II | GTNNAC | 4 cut(s) | 61, 435, 931, 1279 |
| Hpy188I | TCNGA | 2 cut(s) | 564, 1438 |
| Hpy188III | TCNNGA | 9 cut(s) | 314, 464, 499, 550, 796, 859, 1208, 1423, 1564 |
| Hpy8I | GTNNAC | 4 cut(s) | 61, 435, 931, 1279 |
| Hpy99I | CGWCG | 1 cut(s) | 901 |
| HpyAV | CCTTC | 5 cut(s) | 62, 569, 733, 758, 827 |
| HpyCH4III | ACNGT | 2 cut(s) | 1404, 1545 |
| HpyCH4IV | ACGT | 2 cut(s) | 120, 1574 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 254, 485, 680, 1034 |
| HpyF3I | CTNAG | 3 cut(s) | 132, 238, 968 |
| HpySE526I | ACGT | 2 cut(s) | 120, 1574 |
| Ksp22I | TGATCA | 1 cut(s) | 189 |
| Kzo9I | GATC | 3 cut(s) | 189, 466, 603 |
| LmnI | GCTCC | 6 cut(s) | 308, 413, 671, 679, 1477, 1620 |
| Lsp1109I | GCAGC | 3 cut(s) | 500, 695, 1270 |
| LweI | GCATC | 1 cut(s) | 876 |
| MaeI | CTAG | 6 cut(s) | 50, 680, 981, 1482, 1625, 1629 |
| MaeII | ACGT | 2 cut(s) | 120, 1574 |
| MaeIII | GTNAC | 7 cut(s) | 274, 691, 947, 955, 973, 1045, 1103 |
| MalI | GATC | 3 cut(s) | 191, 468, 605 |
| MboI | GATC | 3 cut(s) | 189, 466, 603 |
| MboII | GAAGA | 7 cut(s) | 77, 92, 172, 586, 1117, 1313, 1375 |
| MfeI | CAATTG | 2 cut(s) | 1080, 1311 |
| MflI | RGATCY | 1 cut(s) | 466 |
| MhlI | GDGCHC | 3 cut(s) | 313, 676, 1120 |
| MlsI | TGGCCA | 2 cut(s) | 219, 257 |
| MluNI | TGGCCA | 2 cut(s) | 219, 257 |
| MlyI | GAGTC | 1 cut(s) | 1042 |
| MmeI | TCCRAC | 1 cut(s) | 277 |
| Mox20I | TGGCCA | 2 cut(s) | 219, 257 |
| MroXI | GAANNNNTTC | 1 cut(s) | 907 |
| MscI | TGGCCA | 2 cut(s) | 219, 257 |
| MseI | TTAA | 3 cut(s) | 302, 1053, 1370 |
| MslI | CAYNNNNRTG | 3 cut(s) | 197, 225, 587 |
| Msp20I | TGGCCA | 2 cut(s) | 219, 257 |
| MspCI | CTTAAG | 1 cut(s) | 1052 |
| MspI | CCGG | 1 cut(s) | 516 |
| MspR9I | CCNGG | 2 cut(s) | 516, 1020 |
| MunI | CAATTG | 2 cut(s) | 1080, 1311 |
| Mva1269I | GAATGC | 1 cut(s) | 1039 |
| MvaI | CCWGG | 1 cut(s) | 1020 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 254, 485, 680, 1034 |
| NciI | CCSGG | 1 cut(s) | 516 |
| NcoI | CCATGG | 1 cut(s) | 73 |
| NdeI | CATATG | 2 cut(s) | 529, 961 |
| NdeII | GATC | 3 cut(s) | 189, 466, 603 |
| NlaIV | GGNNCC | 2 cut(s) | 1479, 1622 |
| NmuCI | GTSAC | 2 cut(s) | 1045, 1103 |
| NspI | RCATGY | 1 cut(s) | 102 |
| OliI | CACNNNNGTG | 2 cut(s) | 197, 225 |
| PagI | TCATGA | 1 cut(s) | 795 |
| PaqCI | CACCTGC | 1 cut(s) | 44 |
| PciI | ACATGT | 1 cut(s) | 98 |
| PctI | GAATGC | 1 cut(s) | 1039 |
| PdmI | GAANNNNTTC | 1 cut(s) | 907 |
| PfeI | GAWTC | 4 cut(s) | 555, 862, 1066, 1211 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 264 |
| PfoI | TCCNGGA | 1 cut(s) | 514 |
| PkrI | GCNGC | 3 cut(s) | 490, 685, 1260 |
| PleI | GAGTC | 1 cut(s) | 1042 |
| PpsI | GAGTC | 1 cut(s) | 1042 |
| PscI | ACATGT | 1 cut(s) | 98 |
| Psp124BI | GAGCTC | 2 cut(s) | 313, 676 |
| Psp6I | CCWGG | 1 cut(s) | 1018 |
| PspGI | CCWGG | 1 cut(s) | 1018 |
| PspN4I | GGNNCC | 2 cut(s) | 1479, 1622 |
| PspPI | GGNCC | 1 cut(s) | 267 |
| PstI | CTGCAG | 1 cut(s) | 490 |
| PstNI | CAGNNNCTG | 1 cut(s) | 25 |
| PsuI | RGATCY | 1 cut(s) | 466 |
| RsaI | GTAC | 3 cut(s) | 645, 985, 1155 |
| RsaNI | GTAC | 3 cut(s) | 644, 984, 1154 |
| RseI | CAYNNNNRTG | 3 cut(s) | 197, 225, 587 |
| SacI | GAGCTC | 2 cut(s) | 313, 676 |
| SaqAI | TTAA | 3 cut(s) | 302, 1053, 1370 |
| SatI | GCNGC | 3 cut(s) | 489, 684, 1259 |
| Sau3AI | GATC | 3 cut(s) | 189, 466, 603 |
| Sau96I | GGNCC | 1 cut(s) | 267 |
| ScaI | AGTACT | 1 cut(s) | 1155 |
| SchI | GAGTC | 1 cut(s) | 1042 |
| ScrFI | CCNGG | 2 cut(s) | 516, 1020 |
| SduI | GDGCHC | 3 cut(s) | 313, 676, 1120 |
| SfaNI | GCATC | 1 cut(s) | 876 |
| SfcI | CTRYAG | 1 cut(s) | 486 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 197, 225, 587 |
| SmlI | CTYRAG | 5 cut(s) | 314, 550, 1052, 1421, 1562 |
| SmoI | CTYRAG | 5 cut(s) | 314, 550, 1052, 1421, 1562 |
| SspMI | CTAG | 6 cut(s) | 50, 680, 981, 1482, 1625, 1629 |
| SstI | GAGCTC | 2 cut(s) | 313, 676 |
| StyD4I | CCNGG | 2 cut(s) | 514, 1018 |
| StyI | CCWWGG | 4 cut(s) | 73, 223, 252, 1350 |
| TaaI | ACNGT | 2 cut(s) | 1404, 1545 |
| TaiI | ACGT | 2 cut(s) | 123, 1577 |
| TaqI | TCGA | 3 cut(s) | 858, 896, 1024 |
| TatI | WGTACW | 3 cut(s) | 643, 983, 1153 |
| TfiI | GAWTC | 4 cut(s) | 555, 862, 1066, 1211 |
| Tru1I | TTAA | 3 cut(s) | 302, 1053, 1370 |
| Tru9I | TTAA | 3 cut(s) | 302, 1053, 1370 |
| TscAI | CASTG | 4 cut(s) | 976, 1068, 1407, 1548 |
| TseFI | GTSAC | 2 cut(s) | 1045, 1103 |
| TseI | GCWGC | 3 cut(s) | 488, 683, 1258 |
| Tsp45I | GTSAC | 2 cut(s) | 1045, 1103 |
| TspDTI | ATGAA | 5 cut(s) | 252, 608, 762, 1014, 1117 |
| TspGWI | ACGGA | 1 cut(s) | 810 |
| TspRI | CASTG | 4 cut(s) | 976, 1068, 1407, 1548 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 264 |
| Vha464I | CTTAAG | 1 cut(s) | 1052 |
| XapI | RAATTY | 2 cut(s) | 503, 745 |
| XceI | RCATGY | 1 cut(s) | 102 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 26 |
| XmiI | GTMKAC | 1 cut(s) | 434 |
| XmnI | GAANNNNTTC | 1 cut(s) | 907 |
| XspI | CTAG | 6 cut(s) | 50, 680, 981, 1482, 1625, 1629 |
| ZrmI | AGTACT | 1 cut(s) | 1155 |