Prupe.4G178700_v2.0.a1

MATE efflux family protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
10593017 .. 10600610
7594 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G178700.11

Sequence Viewer

Length: 1587 bp
ATGGAGATGTTAGCAAACACAGGTCACTCAGATAGAAATATTACCACACCCTTATTGGAGGCAGGTAGTCATGGAGAAGGAGCAAAAAGAAAGAGGTGGTCACGGAAGAAAGTGTACTTGGACCTGGTGGAGGCCGAAAAACAGGTTGCGGAGAAGATGATTTCTGAAGGTGGGCATGGAGAAGAAGGATCCGAAAGAAGGTGGTGGAACAACCTGTTAGACATTGAGGAGGCCAAAAAACAGGTCTTATTTTCATTGCCAACAATTCCCACCAATGTGTTCTTTTCCTTGATCCCATTGGTCTCAGTCATGTTTGCTGGCCACCTTGGTGAGCTTCAGTTGGCTGGTGCAACCCTGGCCAACTCATGGGCCAATGTTACTGGTTTCGCGCTCGTGGTTGGTTTGAGTGGAGCTCTTGAGACACTTTGTGGACAAGGCTTTGGTGCAAAGTCGTACAGAATGTTGGGGATTTATCTACAAGCCTCTTGCATCATATCCTTCCTGTTATGTTCCATCATATCCATAATCTGGTTCTATACAGAGCCCTTACTGATTTTACTCCATCAAGATCCTCAAATTTCAAAAACTGCAGCTCTCTTTTTGAAACATCTGATCCCTGGATTATTTGCATATGGATTCCTGCAAAACATCTTGAGATTTCTTCAGACACAATCTGTATATGTCATGCCAATGGTCTTCTCAGTGATTGCCATTGTTTTTCATATTGGCATTACATATGGTTTGGTACATTGGACAGCTCTTGGATTCTTGGGAGCTCCACTTGCAGCCTCAATTTCTCTATGGTTATCTGTTCTTATGTTGGCCTTCAATGTCAGTTGTACAAAGAGTTTTGAGCGTACGTGGGAAGGATTTTCATTTGAATGTTTCGATTATATCCTCACTGGCTTAAAACTGGCCCTCCCCTCTGCAACAATGGAATGTTTGGAGGAATGGGGTTTTGAGATTCTAGTGCTCTTAGGTGGATTGATGCCAAACTCTGCAAAAACAAGTTCACTACTTGCAATGTGTGTAAATACACAAGAAATTGGTTACAAAATTACATATGGCCTCATTGCTGCTGCCAGCACAAGGGTGTCAAATGAATTGGGAGCAGGCAATCCAGATAGGGCTAAGAATGCAATGGTTGCGACTCTTAAGCTCTCCGTGCTTCTCTCTTTCGCGATTATTCTGGCTCTTGTGTTTGGTCACAATATTTGGGTTGCCTTCTTCATTGACAGCAATGCAAGTTATGCAGTATTGAGACAGGACTTTGCTTCCATGACACCATTGCTTGCAATCTCAATAATTGTTGATTCTGTTCAAGGTGTCATTTCAGGTGTGGCTAGAGGATGTGGGTGGCAACACTTGGCTGTGTATGTAAATTTGGCAACATTCTATTTGATTGGTATGACAATTGCTGGTCTTCTTGGATTTAAGTTCAAACTATATGCCAAGGGCTTGTGGATTGGTATAACCTGCGGTCTCTCCTTTCAAGCGAGCACACTCTTGCTGATTACACTGCTCAAGGAATGGCCTCGATCAGATTTATCTAAAAATCCAGAGGAAGGAAGCCCAGTTTTGGTCTAG

Protein Analysis

529

Amino Acids

57.73

Weight (kDa)

6.8

Isoelectric Point (pI)

36.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000715)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 53, 1484
AccB7I CCANNNNNTGG 2 cut(s) 366, 528
AccII CGCG 2 cut(s) 389, 1181
AciI CCGC 2 cut(s) 149, 1479
AclWI GGATC 5 cut(s) 183, 196, 286, 563, 607
AcoI YGGCCR 2 cut(s) 319, 357
AcsI RAATTY 2 cut(s) 576, 1381
AcuI CTGAAG 3 cut(s) 186, 320, 647
AdeI CACNNNGTG 1 cut(s) 428
AfaI GTAC 5 cut(s) 116, 455, 747, 841, 859
AfiI CCNNNNNNNGG 7 cut(s) 130, 198, 366, 528, 1089, 1565, 1579
AflII CTTAAG 1 cut(s) 1154
AgsI TTSAA 7 cut(s) 582, 604, 829, 881, 1322, 1441, 1493
AjnI CCWGG 3 cut(s) 123, 354, 616
AjuI GAANNNNNNNTTGG 2 cut(s) 101, 133
AleI CACNNNNGTG 3 cut(s) 275, 327, 1091
AluBI AGCT 6 cut(s) 334, 413, 593, 758, 776, 1159
AluI AGCT 6 cut(s) 334, 413, 593, 758, 776, 1159
Alw21I GWGCWC 4 cut(s) 415, 778, 975, 1502
Alw26I GTCTC 4 cut(s) 307, 413, 1255, 1487
AlwI GGATC 5 cut(s) 183, 196, 286, 563, 607
AoxI GGCC 9 cut(s) 132, 231, 319, 357, 369, 822, 915, 1066, 1532
ApeKI GCWGC 4 cut(s) 590, 785, 1076, 1079
ApoI RAATTY 2 cut(s) 576, 1381
ArsI GACNNNNNNTTYG 2 cut(s) 228, 260
AspLEI GCGC 1 cut(s) 391
AspS9I GGNCC 3 cut(s) 121, 369, 916
AsuHPI GGTGA 1 cut(s) 341
AvaII GGWCC 1 cut(s) 121
BalI TGGCCA 2 cut(s) 321, 359
BamHI GGATCC 1 cut(s) 188
BanII GRGCYC 3 cut(s) 415, 546, 778
BarI GAAGNNNNNNTAC 2 cut(s) 98, 130
BauI CACGAG 1 cut(s) 392
BbsI GAAGAC 2 cut(s) 688, 1415
Bbv12I GWGCWC 4 cut(s) 415, 778, 975, 1502
BbvI GCAGC 4 cut(s) 602, 797, 1063, 1066
BccI CCATC 2 cut(s) 521, 570
BciT130I CCWGG 3 cut(s) 125, 356, 618
BcoDI GTCTC 4 cut(s) 307, 413, 1255, 1487
BfaI CTAG 3 cut(s) 968, 1344, 1585
BfmI CTRYAG 1 cut(s) 588
BfrI CTTAAG 1 cut(s) 1154
BfuAI ACCTGC 2 cut(s) 53, 1484
BisI GCNGC 4 cut(s) 591, 786, 1077, 1080
BlsI GCNGC 4 cut(s) 592, 787, 1078, 1081
Bme1390I CCNGG 3 cut(s) 125, 356, 618
Bme18I GGWCC 1 cut(s) 121
BmgT120I GGNCC 3 cut(s) 121, 369, 916
BmiI GGNNCC 1 cut(s) 190
BmrFI CCNGG 3 cut(s) 125, 356, 618
BmrI ACTGGG 1 cut(s) 1568
BmsI GCATC 2 cut(s) 498, 978
BmuI ACTGGG 1 cut(s) 1568
BpiI GAAGAC 2 cut(s) 688, 1415
BplI GAGNNNNNCTC 2 cut(s) 397, 429
BpuEI CTTGAG 3 cut(s) 437, 673, 1508
BsaAI YACGTR 1 cut(s) 861
BsaI GGTCTC 2 cut(s) 307, 1487
BsaJI CCNNGG 4 cut(s) 325, 354, 616, 1452
BsaXI ACNNNNNCTCC 2 cut(s) 903, 933
Bsc4I CCNNNNNNNGG 7 cut(s) 130, 198, 366, 528, 1089, 1565, 1579
Bse1I ACTGG 4 cut(s) 385, 907, 918, 1574
Bse3DI GCAATG 6 cut(s) 254, 1029, 1071, 1146, 1246, 1286
BseBI CCWGG 3 cut(s) 125, 356, 618
BseDI CCNNGG 4 cut(s) 325, 354, 616, 1452
BseGI GGATG 1 cut(s) 1355
BseLI CCNNNNNNNGG 7 cut(s) 130, 198, 366, 528, 1089, 1565, 1579
BseMI GCAATG 6 cut(s) 254, 1029, 1071, 1146, 1246, 1286
BseMII CTCAG 3 cut(s) 42, 318, 714
BseNI ACTGG 4 cut(s) 385, 907, 918, 1574
BseRI GAGGAG 1 cut(s) 242
BseXI GCAGC 4 cut(s) 602, 797, 1063, 1066
Bsh1236I CGCG 2 cut(s) 389, 1181
BshFI GGCC 9 cut(s) 134, 233, 321, 359, 371, 824, 917, 1068, 1534
BsiHKAI GWGCWC 4 cut(s) 415, 778, 975, 1502
BsiWI CGTACG 1 cut(s) 857
BslI CCNNNNNNNGG 7 cut(s) 130, 198, 366, 528, 1089, 1565, 1579
BsmAI GTCTC 4 cut(s) 307, 413, 1255, 1487
BsmI GAATGC 1 cut(s) 1141
BsnI GGCC 9 cut(s) 134, 233, 321, 359, 371, 824, 917, 1068, 1534
Bso31I GGTCTC 2 cut(s) 307, 1487
Bsp1286I GDGCHC 5 cut(s) 415, 546, 778, 975, 1502
Bsp1407I TGTACA 1 cut(s) 839
Bsp143I GATC 5 cut(s) 188, 291, 568, 612, 1538
Bsp68I TCGCGA 1 cut(s) 1181
BspACI CCGC 2 cut(s) 149, 1479
BspANI GGCC 9 cut(s) 134, 233, 321, 359, 371, 824, 917, 1068, 1534
BspCNI CTCAG 3 cut(s) 41, 317, 713
BspFNI CGCG 2 cut(s) 389, 1181
BspLI GGNNCC 1 cut(s) 190
BspMAI CTGCAG 1 cut(s) 592
BspMI ACCTGC 2 cut(s) 53, 1484
BspPI GGATC 5 cut(s) 183, 196, 286, 563, 607
BspTI CTTAAG 1 cut(s) 1154
BspTNI GGTCTC 2 cut(s) 307, 1487
BsrDI GCAATG 6 cut(s) 254, 1029, 1071, 1146, 1246, 1286
BsrGI TGTACA 1 cut(s) 839
BsrI ACTGG 4 cut(s) 385, 907, 918, 1574
BssECI CCNNGG 4 cut(s) 325, 354, 616, 1452
BssMI GATC 5 cut(s) 188, 291, 568, 612, 1538
BssSI CACGAG 1 cut(s) 392
BssT1I CCWWGG 2 cut(s) 325, 1452
Bst2BI CACGAG 1 cut(s) 392
Bst2UI CCWGG 3 cut(s) 125, 356, 618
BstAFI CTTAAG 1 cut(s) 1154
BstAPI GCANNNNNTGC 2 cut(s) 1145, 1250
BstAUI TGTACA 1 cut(s) 839
BstBAI YACGTR 1 cut(s) 861
BstC8I GCNNGC 5 cut(s) 319, 1084, 1114, 1293, 1498
BstDEI CTNAG 5 cut(s) 28, 304, 700, 976, 1131
BstENI CCTNNNNNAGG 1 cut(s) 128
BstF5I GGATG 1 cut(s) 1355
BstFNI CGCG 2 cut(s) 389, 1181
BstHHI GCGC 1 cut(s) 391
BstKTI GATC 5 cut(s) 191, 294, 571, 615, 1541
BstMAI GTCTC 4 cut(s) 307, 413, 1255, 1487
BstMBI GATC 5 cut(s) 188, 291, 568, 612, 1538
BstMWI GCNNNNNNNGC 6 cut(s) 356, 782, 1136, 1145, 1165, 1250
BstNI CCWGG 3 cut(s) 125, 356, 618
BstSCI CCNGG 3 cut(s) 123, 354, 616
BstSFI CTRYAG 1 cut(s) 588
BstUI CGCG 2 cut(s) 389, 1181
BstV1I GCAGC 4 cut(s) 602, 797, 1063, 1066
BstV2I GAAGAC 2 cut(s) 688, 1415
BstX2I RGATCY 2 cut(s) 188, 568
BstYI RGATCY 2 cut(s) 188, 568
BsuRI GGCC 9 cut(s) 134, 233, 321, 359, 371, 824, 917, 1068, 1534
BtsCI GGATG 1 cut(s) 1355
BtsI GCAGTG 1 cut(s) 1517
BtsIMutI CAGTG 3 cut(s) 708, 900, 1517
BtuMI TCGCGA 1 cut(s) 1181
BveI ACCTGC 2 cut(s) 53, 1484
Cac8I GCNNGC 5 cut(s) 319, 1084, 1114, 1293, 1498
CfoI GCGC 1 cut(s) 391
Cfr13I GGNCC 3 cut(s) 121, 369, 916
CsiI ACCWGGT 1 cut(s) 123
Csp6I GTAC 5 cut(s) 115, 454, 746, 840, 858
CviAII CATG 6 cut(s) 71, 176, 310, 366, 685, 1279
CviQI GTAC 5 cut(s) 115, 454, 746, 840, 858
DdeI CTNAG 5 cut(s) 28, 304, 700, 976, 1131
DpnI GATC 5 cut(s) 190, 293, 570, 614, 1540
DpnII GATC 5 cut(s) 188, 291, 568, 612, 1538
DraIII CACNNNGTG 1 cut(s) 428
EaeI YGGCCR 2 cut(s) 319, 357
Ecl136II GAGCTC 2 cut(s) 413, 776
Eco130I CCWWGG 2 cut(s) 325, 1452
Eco24I GRGCYC 3 cut(s) 415, 546, 778
Eco31I GGTCTC 2 cut(s) 307, 1487
Eco47I GGWCC 1 cut(s) 121
Eco53kI GAGCTC 2 cut(s) 413, 776
Eco57I CTGAAG 3 cut(s) 186, 320, 647
EcoICRI GAGCTC 2 cut(s) 413, 776
EcoNI CCTNNNNNAGG 1 cut(s) 128
EcoRII CCWGG 3 cut(s) 123, 354, 616
EcoT14I CCWWGG 2 cut(s) 325, 1452
EcoT38I GRGCYC 3 cut(s) 415, 546, 778
ErhI CCWWGG 2 cut(s) 325, 1452
FaeI CATG 6 cut(s) 74, 179, 313, 369, 688, 1282
FatI CATG 6 cut(s) 70, 175, 309, 365, 684, 1278
FauNDI CATATG 3 cut(s) 631, 736, 1063
Fnu4HI GCNGC 4 cut(s) 591, 786, 1077, 1080
FokI GGATG 1 cut(s) 1362
FriOI GRGCYC 3 cut(s) 415, 546, 778
Fsp4HI GCNGC 4 cut(s) 591, 786, 1077, 1080
FspBI CTAG 3 cut(s) 968, 1344, 1585
GlaI GCGC 1 cut(s) 390
GluI GCNGC 4 cut(s) 591, 786, 1077, 1080
HaeIII GGCC 9 cut(s) 134, 233, 321, 359, 371, 824, 917, 1068, 1534
HhaI GCGC 1 cut(s) 391
Hin1II CATG 6 cut(s) 74, 179, 313, 369, 688, 1282
Hin6I GCGC 1 cut(s) 389
HinP1I GCGC 1 cut(s) 389
HinfI GANTC 5 cut(s) 636, 765, 964, 1150, 1313
HphI GGTGA 1 cut(s) 341
Hpy166II GTNNAC 3 cut(s) 115, 431, 1013
Hpy188I TCNGA 6 cut(s) 31, 166, 193, 612, 666, 1543
Hpy188III TCNNGA 6 cut(s) 416, 566, 652, 1121, 1180, 1559
Hpy8I GTNNAC 3 cut(s) 115, 431, 1013
HpyAV CCTTC 9 cut(s) 71, 161, 179, 192, 508, 835, 860, 1234, 1559
HpyCH4IV ACGT 1 cut(s) 860
HpyF10VI GCNNNNNNNGC 6 cut(s) 356, 782, 1136, 1145, 1165, 1250
HpyF3I CTNAG 5 cut(s) 28, 304, 700, 976, 1131
HpySE526I ACGT 1 cut(s) 860
Hsp92II CATG 6 cut(s) 74, 179, 313, 369, 688, 1282
HspAI GCGC 1 cut(s) 389
Kzo9I GATC 5 cut(s) 188, 291, 568, 612, 1538
LmnI GCTCC 5 cut(s) 80, 410, 773, 781, 1109
Lsp1109I GCAGC 4 cut(s) 602, 797, 1063, 1066
LweI GCATC 2 cut(s) 498, 978
MabI ACCWGGT 1 cut(s) 123
MaeI CTAG 3 cut(s) 968, 1344, 1585
MaeII ACGT 1 cut(s) 860
MaeIII GTNAC 5 cut(s) 23, 99, 376, 1049, 1205
MalI GATC 5 cut(s) 190, 293, 570, 614, 1540
MboI GATC 5 cut(s) 188, 291, 568, 612, 1538
MboII GAAGA 7 cut(s) 118, 166, 194, 653, 688, 1219, 1415
MfeI CAATTG 1 cut(s) 1413
MflI RGATCY 2 cut(s) 188, 568
MhlI GDGCHC 5 cut(s) 415, 546, 778, 975, 1502
MlsI TGGCCA 2 cut(s) 321, 359
MluCI AATT 9 cut(s) 264, 576, 792, 1044, 1056, 1103, 1305, 1381, 1413
MluNI TGGCCA 2 cut(s) 321, 359
MlyI GAGTC 1 cut(s) 1144
Mox20I TGGCCA 2 cut(s) 321, 359
MscI TGGCCA 2 cut(s) 321, 359
MseI TTAA 3 cut(s) 908, 1155, 1434
MslI CAYNNNNRTG 5 cut(s) 275, 327, 689, 880, 1091
Msp20I TGGCCA 2 cut(s) 321, 359
MspCI CTTAAG 1 cut(s) 1154
MspR9I CCNGG 3 cut(s) 125, 356, 618
MunI CAATTG 1 cut(s) 1413
Mva1269I GAATGC 1 cut(s) 1141
MvaI CCWGG 3 cut(s) 125, 356, 618
MvnI CGCG 2 cut(s) 389, 1181
MwoI GCNNNNNNNGC 6 cut(s) 356, 782, 1136, 1145, 1165, 1250
NdeI CATATG 3 cut(s) 631, 736, 1063
NdeII GATC 5 cut(s) 188, 291, 568, 612, 1538
NlaIII CATG 6 cut(s) 74, 179, 313, 369, 688, 1282
NlaIV GGNNCC 1 cut(s) 190
NmuCI GTSAC 3 cut(s) 23, 99, 1205
NruI TCGCGA 1 cut(s) 1181
OliI CACNNNNGTG 3 cut(s) 275, 327, 1091
PctI GAATGC 1 cut(s) 1141
PfeI GAWTC 4 cut(s) 636, 765, 964, 1313
Pfl23II CGTACG 1 cut(s) 857
PflMI CCANNNNNTGG 2 cut(s) 366, 528
PkrI GCNGC 4 cut(s) 592, 787, 1078, 1081
PleI GAGTC 1 cut(s) 1144
PpsI GAGTC 1 cut(s) 1144
Ppu21I YACGTR 1 cut(s) 861
Psp124BI GAGCTC 2 cut(s) 415, 778
Psp6I CCWGG 3 cut(s) 123, 354, 616
PspGI CCWGG 3 cut(s) 123, 354, 616
PspLI CGTACG 1 cut(s) 857
PspN4I GGNNCC 1 cut(s) 190
PspPI GGNCC 3 cut(s) 121, 369, 916
PstI CTGCAG 1 cut(s) 592
PsuI RGATCY 2 cut(s) 188, 568
RruI TCGCGA 1 cut(s) 1181
RsaI GTAC 5 cut(s) 116, 455, 747, 841, 859
RsaNI GTAC 5 cut(s) 115, 454, 746, 840, 858
RseI CAYNNNNRTG 5 cut(s) 275, 327, 689, 880, 1091
SacI GAGCTC 2 cut(s) 415, 778
SaqAI TTAA 3 cut(s) 908, 1155, 1434
SatI GCNGC 4 cut(s) 591, 786, 1077, 1080
Sau3AI GATC 5 cut(s) 188, 291, 568, 612, 1538
Sau96I GGNCC 3 cut(s) 121, 369, 916
SchI GAGTC 1 cut(s) 1144
ScrFI CCNGG 3 cut(s) 125, 356, 618
SduI GDGCHC 5 cut(s) 415, 546, 778, 975, 1502
SexAI ACCWGGT 1 cut(s) 123
SfaNI GCATC 2 cut(s) 498, 978
SfcI CTRYAG 1 cut(s) 588
SinI GGWCC 1 cut(s) 121
SmiMI CAYNNNNRTG 5 cut(s) 275, 327, 689, 880, 1091
SmlI CTYRAG 4 cut(s) 416, 652, 1154, 1523
SmoI CTYRAG 4 cut(s) 416, 652, 1154, 1523
Sse9I AATT 9 cut(s) 264, 576, 792, 1044, 1056, 1103, 1305, 1381, 1413
SsiI CCGC 2 cut(s) 149, 1479
SspI AATATT 2 cut(s) 40, 1213
SspMI CTAG 3 cut(s) 968, 1344, 1585
SstI GAGCTC 2 cut(s) 415, 778
StyD4I CCNGG 3 cut(s) 123, 354, 616
StyI CCWWGG 2 cut(s) 325, 1452
TaiI ACGT 1 cut(s) 863
TaqI TCGA 2 cut(s) 888, 1537
TasI AATT 9 cut(s) 264, 576, 792, 1044, 1056, 1103, 1305, 1381, 1413
TatI WGTACW 2 cut(s) 114, 839
TfiI GAWTC 4 cut(s) 636, 765, 964, 1313
Tru1I TTAA 3 cut(s) 908, 1155, 1434
Tru9I TTAA 3 cut(s) 908, 1155, 1434
TscAI CASTG 3 cut(s) 708, 907, 1524
TseFI GTSAC 3 cut(s) 23, 99, 1205
TseI GCWGC 4 cut(s) 590, 785, 1076, 1079
Tsp45I GTSAC 3 cut(s) 23, 99, 1205
TspDTI ATGAA 5 cut(s) 243, 710, 864, 1116, 1219
TspGWI ACGGA 2 cut(s) 118, 1153
TspRI CASTG 3 cut(s) 708, 907, 1524
Van91I CCANNNNNTGG 2 cut(s) 366, 528
Vha464I CTTAAG 1 cut(s) 1154
VpaK11BI GGWCC 1 cut(s) 121
XagI CCTNNNNNAGG 1 cut(s) 128
XapI RAATTY 2 cut(s) 576, 1381
XcmI CCANNNNNNNNNTGG 1 cut(s) 52
XspI CTAG 3 cut(s) 968, 1344, 1585
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.