Rh5AG227700

MATE efflux family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000715
Physical Location & Seq
Forward (+)
27360359 .. 27364410
4052 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG227700.1

Sequence Viewer

Length: 1443 bp
ATGTTAGAAAACACAGCAAGTTCAGATACTAATGCTGCAGTGCCCTTATTGGAGTCAGGAGTTCATGGAGCTGAAGGAGTCAGGTGGTGGAGCAAAGTTTTGGATGTGGAGGAGGCGAAGGACCAGGTCTTGTTTTCGTTGCCGATGATTCTGACCAATGTTTTCTATTACTTGATCACTTTGATTTCAGTTATGTTTGCTGGTCACCTTGGTGAGCTTGAGCTTGCTGGGGCAACACTGGCCAATTCCTGGGCCGTTGTCACTGGCTTCGCTTTCATGGTTGGGTTGAGCGGAGCACTTGAGACCCTGTGTGGGCAAGGATTTGGTGCAAAGTCATACAGAATGTTGGGAATTTATCTGCAAGCCTCTTCCGTCATATCTTTCCTCTTCTCTATCATCATATCTGTAATCTGGTTCTACACCGAGCCCATACTTATCTTACTCCAGCAAGATCCTCAAATTTCGAAATCTGCTGCGATTTATATTAAGTATCTGATTCCGGGATTATTTGCATATGGATTCTTGAATAACATATTGAGATTTCTTCAGACACAATCTGTTGTCATGCCATTGGTTTTTCTCTCAGTGATCCCAGTGGTTCTTCATATTGGTATTGCATACGGTTTGGTACATTGGACACCTCTTGGGTTCAAGGGAGCTCCACTAGCAGCTTCGATTTCGTTATGGATATCGGTCCTCATGCTGACCACGTATGTTGTTCGTGCTAAGAAGTTTGAGCACACATGGGAAGGATTTTCATTAGAATCATTCCATTATGTCCCAACTGACTTGAAACTTGCCCTCCCCTCTGCAGCAATGGTTTGCTTGGAATACTGGGCTTTTGAGATTCTGGTGCTCTTGGCAGGATTAATGCCAAACTCGGAACAAACCACTTCACTAATTGCAATGTGTGTGAATACAGAAACAATTGCTTACATGCTTACATATGGCCTCAGTGCTGCAGCAAGCACAAGGGTGTCAAATGAATTGGGAGCAGGCAAACCGGACCGAGCTAAGAATGCAATGGCTATGACTCTGAAGCTCTCTGTGCTTCTTGGTTTCTTAGTTGTTCTGGCGCTAGCAATTGGTCACAATATCTGGGCTGGCTTCTTCAGTGACAGCACCGCAATAATAAAGGAATTTGCTTCCATGACACCATTTCTTGCAATTTCAATAATGCTTGATTCAGTGCAAGGTGTCTTATCAGGTGTGGCTAGAGGATGTGGGTGGCAGCATTTGGCAGTGTATGTGAACTTGGGTACATTCTATTTGATTGGTGTGACGATTGCATGTCTTCTTGGATTTAAGTTGACACTATATGCCAAGGGTCTATGGATTGGTTTAATCTGTGGTCTTTCCTGTCAAGCTGGGGCACTTATGTTGATTACATTGCGCACAAAATGGACTCAATTAGATTTAACTCATAATGCAGCATCTGTTTAA

Protein Analysis

480

Amino Acids

52.09

Weight (kDa)

6.31

Isoelectric Point (pI)

28.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 48 - 207 3.1e-34 MatE
MatE PF01554 269 - 430 4.3e-26 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000715)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G23550 AT3G23560 AT3G23560
fragaria_vesca FvH4_1g15630 FvH4_1g15630 FvH4_3g19700 FvH4_3g19700 FvH4_3g19700 FvH4_3g19700 FvH4_3g19700 FvH4_3g19720 FvH4_3g20060 FvH4_3g20060 FvH4_3g20060 FvH4_3g20060 FvH4_5g31740 FvH4_7g19991
malus_domestica MD03G1230300.v1.1 MD11G1250700.v1.1 MD11G1251300.v1.1 MD11G1251400.v1.1 MD11G1251500.v1.1 MD12G1088700.v1.1
prunus_persica Prupe.4G177700_v2.0.a1 Prupe.4G177700_v2.0.a1 Prupe.4G177900_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178700_v2.0.a1 Prupe.4G178900_v2.0.a1 Prupe.4G178900_v2.0.a1 Prupe.4G178900_v2.0.a1 Prupe.4G206700_v2.0.a1
pyrus_communis pycom03g17780 pycom10g06980 pycom11g22170 pycom11g22270
rosa_chinensis RchiOBHm_Chr5g0033011 RchiOBHm_Chr5g0033061
rosa_laevigata RLG00000033443 RLG00000033445
rosa_multiflora Rmu_sc0000986.1_g000015
rosa_roxburghii Rroxscaffold_1G00046880 Rroxscaffold_1G00046890 Rroxscaffold_1G00046990 Rroxscaffold_1G00047000 Rroxscaffold_1G00047040
rosa_rugosa Rorug05G0135000 Rorug05G0135100 Rorug05G0135200 Rorug05G0135500 Rorug05G0135600 Rorug05G0135700 Rorug05G0135800
rosa_samantha Rh5AG227700 Rh5AG228200 Rh5BG229300 Rh5BG229400 Rh5CG256700 Rh5CG257200 Rh5DG233900 Rh5DG234100
rosa_wichuraiana Rw5G020860 Rw5G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1394
AccB7I CCANNNNNTGG 1 cut(s) 249
AccBSI CCGCTC 1 cut(s) 291
AciI CCGC 2 cut(s) 291, 1125
AclWI GGATC 2 cut(s) 446, 583
AcoI YGGCCR 1 cut(s) 240
AcsI RAATTY 3 cut(s) 351, 459, 1139
AcuI CTGAAG 4 cut(s) 93, 530, 1058, 1096
AfaI GTAC 2 cut(s) 630, 1261
AfiI CCNNNNNNNGG 2 cut(s) 249, 312
AgsI TTSAA 4 cut(s) 526, 652, 793, 1173
AjnI CCWGG 2 cut(s) 123, 248
AleI CACNNNNGTG 2 cut(s) 210, 974
AluBI AGCT 8 cut(s) 71, 217, 223, 659, 671, 1013, 1042, 1367
AluI AGCT 8 cut(s) 71, 217, 223, 659, 671, 1013, 1042, 1367
Alw21I GWGCWC 4 cut(s) 298, 661, 741, 858
Alw26I GTCTC 1 cut(s) 296
AlwI GGATC 2 cut(s) 446, 583
AlwNI CAGNNNCTG 1 cut(s) 1436
AoxI GGCC 3 cut(s) 240, 252, 949
ApeKI GCWGC 8 cut(s) 35, 473, 668, 812, 959, 962, 1231, 1430
ApoI RAATTY 3 cut(s) 351, 459, 1139
AseI ATTAAT 1 cut(s) 869
AspLEI GCGC 2 cut(s) 1078, 1395
AspS9I GGNCC 4 cut(s) 121, 252, 694, 1006
AsuC2I CCSGG 1 cut(s) 501
AsuHPI GGTGA 2 cut(s) 197, 224
AsuII TTCGAA 1 cut(s) 464
AsuNHI GCTAGC 1 cut(s) 1078
AvaII GGWCC 3 cut(s) 121, 694, 1006
BaeGI GKGCMC 2 cut(s) 45, 1375
BalI TGGCCA 1 cut(s) 242
BanII GRGCYC 2 cut(s) 429, 661
BbsI GAAGAC 1 cut(s) 1286
Bbv12I GWGCWC 4 cut(s) 298, 661, 741, 858
BbvI GCAGC 7 cut(s) 22, 460, 680, 824, 946, 974, 1243
BceAI ACGGC 1 cut(s) 239
BciT130I CCWGG 2 cut(s) 125, 250
BclI TGATCA 1 cut(s) 174
BcnI CCSGG 1 cut(s) 501
BcoDI GTCTC 1 cut(s) 296
BfaI CTAG 3 cut(s) 665, 1079, 1215
BfmI CTRYAG 3 cut(s) 36, 810, 960
BfoI RGCGCY 1 cut(s) 1079
BisI GCNGC 8 cut(s) 36, 474, 669, 813, 960, 963, 1232, 1431
BlsI GCNGC 8 cut(s) 37, 475, 670, 814, 961, 964, 1233, 1432
Bme1390I CCNGG 3 cut(s) 125, 250, 501
Bme18I GGWCC 3 cut(s) 121, 694, 1006
BmgT120I GGNCC 4 cut(s) 121, 252, 694, 1006
BmrFI CCNGG 3 cut(s) 125, 250, 501
BmrI ACTGGG 2 cut(s) 587, 844
BmtI GCTAGC 1 cut(s) 1082
BmuI ACTGGG 2 cut(s) 587, 844
BpiI GAAGAC 1 cut(s) 1286
BpmI CTGGAG 1 cut(s) 428
Bpu14I TTCGAA 1 cut(s) 464
BpuEI CTTGAG 2 cut(s) 239, 320
BpuMI CCSGG 1 cut(s) 501
BsaAI YACGTR 1 cut(s) 711
BsaI GGTCTC 1 cut(s) 296
BsaJI CCNNGG 3 cut(s) 208, 249, 1323
BsaWI WCCGGW 1 cut(s) 1003
BsaXI ACNNNNNCTCC 2 cut(s) 786, 816
Bsc4I CCNNNNNNNGG 2 cut(s) 249, 312
Bse1I ACTGG 4 cut(s) 243, 268, 593, 839
Bse3DI GCAATG 4 cut(s) 822, 912, 1029, 1388
BseBI CCWGG 2 cut(s) 125, 250
BseDI CCNNGG 3 cut(s) 208, 249, 1323
BseGI GGATG 2 cut(s) 109, 1226
BseLI CCNNNNNNNGG 2 cut(s) 249, 312
BseMI GCAATG 4 cut(s) 822, 912, 1029, 1388
BseMII CTCAG 2 cut(s) 597, 967
BseNI ACTGG 4 cut(s) 243, 268, 593, 839
BseRI GAGGAG 1 cut(s) 125
BseSI GKGCMC 2 cut(s) 45, 1375
BseXI GCAGC 7 cut(s) 22, 460, 680, 824, 946, 974, 1243
BseYI CCCAGC 2 cut(s) 227, 1367
BshFI GGCC 3 cut(s) 242, 254, 951
BsiHKAI GWGCWC 4 cut(s) 298, 661, 741, 858
BsiSI CCGG 2 cut(s) 500, 1004
BslFI GGGAC 1 cut(s) 764
BslI CCNNNNNNNGG 2 cut(s) 249, 312
BsmAI GTCTC 1 cut(s) 296
BsmFI GGGAC 1 cut(s) 764
BsmI GAATGC 1 cut(s) 1024
BsnI GGCC 3 cut(s) 242, 254, 951
Bso31I GGTCTC 1 cut(s) 296
Bsp119I TTCGAA 1 cut(s) 464
Bsp1286I GDGCHC 7 cut(s) 45, 298, 429, 661, 741, 858, 1375
Bsp143I GATC 3 cut(s) 174, 451, 588
BspACI CCGC 2 cut(s) 291, 1125
BspANI GGCC 3 cut(s) 242, 254, 951
BspCNI CTCAG 2 cut(s) 596, 966
BspMAI CTGCAG 3 cut(s) 40, 814, 964
BspOI GCTAGC 1 cut(s) 1082
BspPI GGATC 2 cut(s) 446, 583
BspT104I TTCGAA 1 cut(s) 464
BspTNI GGTCTC 1 cut(s) 296
BsrBI CCGCTC 1 cut(s) 291
BsrDI GCAATG 4 cut(s) 822, 912, 1029, 1388
BsrI ACTGG 4 cut(s) 243, 268, 593, 839
BssECI CCNNGG 3 cut(s) 208, 249, 1323
BssMI GATC 3 cut(s) 174, 451, 588
BssT1I CCWWGG 2 cut(s) 208, 1323
Bst2UI CCWGG 2 cut(s) 125, 250
Bst4CI ACNGT 1 cut(s) 623
Bst6I CTCTTC 2 cut(s) 373, 392
BstBAI YACGTR 1 cut(s) 711
BstBI TTCGAA 1 cut(s) 464
BstC8I GCNNGC 6 cut(s) 225, 363, 967, 997, 1080, 1105
BstDEI CTNAG 5 cut(s) 583, 726, 953, 1014, 1063
BstEII GGTNACC 1 cut(s) 203
BstF5I GGATG 2 cut(s) 109, 1226
BstH2I RGCGCY 1 cut(s) 1079
BstHHI GCGC 2 cut(s) 1078, 1395
BstKTI GATC 3 cut(s) 177, 454, 591
BstMAI GTCTC 1 cut(s) 296
BstMBI GATC 3 cut(s) 174, 451, 588
BstMWI GCNNNNNNNGC 4 cut(s) 239, 665, 1019, 1048
BstNI CCWGG 2 cut(s) 125, 250
BstNSI RCATGY 2 cut(s) 940, 1293
BstPI GGTNACC 1 cut(s) 203
BstSCI CCNGG 3 cut(s) 123, 248, 499
BstSFI CTRYAG 3 cut(s) 36, 810, 960
BstSLI GKGCMC 2 cut(s) 45, 1375
BstV1I GCAGC 7 cut(s) 22, 460, 680, 824, 946, 974, 1243
BstV2I GAAGAC 1 cut(s) 1286
BstX2I RGATCY 1 cut(s) 451
BstYI RGATCY 1 cut(s) 451
BsuRI GGCC 3 cut(s) 242, 254, 951
BtsCI GGATG 2 cut(s) 109, 1226
BtsI GCAGTG 2 cut(s) 45, 1248
BtsIMutI CAGTG 9 cut(s) 45, 236, 261, 591, 600, 961, 1120, 1194, 1248
Cac8I GCNNGC 6 cut(s) 225, 363, 967, 997, 1080, 1105
CaiI CAGNNNCTG 1 cut(s) 1436
CfoI GCGC 2 cut(s) 1078, 1395
Cfr13I GGNCC 4 cut(s) 121, 252, 694, 1006
CpoI CGGWCCG 1 cut(s) 1006
CsiI ACCWGGT 1 cut(s) 123
Csp6I GTAC 2 cut(s) 629, 1260
CspCI CAANNNNNGTGG 2 cut(s) 697, 732
CspI CGGWCCG 1 cut(s) 1006
CviAII CATG 8 cut(s) 65, 277, 565, 700, 744, 937, 1150, 1290
CviQI GTAC 2 cut(s) 629, 1260
DdeI CTNAG 5 cut(s) 583, 726, 953, 1014, 1063
DpnI GATC 3 cut(s) 176, 453, 590
DpnII GATC 3 cut(s) 174, 451, 588
EaeI YGGCCR 1 cut(s) 240
Eam1104I CTCTTC 2 cut(s) 373, 392
EarI CTCTTC 2 cut(s) 373, 392
Ecl136II GAGCTC 1 cut(s) 659
Eco130I CCWWGG 2 cut(s) 208, 1323
Eco24I GRGCYC 2 cut(s) 429, 661
Eco31I GGTCTC 1 cut(s) 296
Eco32I GATATC 1 cut(s) 690
Eco47I GGWCC 3 cut(s) 121, 694, 1006
Eco53kI GAGCTC 1 cut(s) 659
Eco57I CTGAAG 4 cut(s) 93, 530, 1058, 1096
Eco91I GGTNACC 1 cut(s) 203
EcoICRI GAGCTC 1 cut(s) 659
EcoO65I GGTNACC 1 cut(s) 203
EcoRII CCWGG 2 cut(s) 123, 248
EcoRV GATATC 1 cut(s) 690
EcoT14I CCWWGG 2 cut(s) 208, 1323
EcoT38I GRGCYC 2 cut(s) 429, 661
ErhI CCWWGG 2 cut(s) 208, 1323
FaeI CATG 8 cut(s) 68, 280, 568, 703, 747, 940, 1153, 1293
FaqI GGGAC 1 cut(s) 764
FatI CATG 8 cut(s) 64, 276, 564, 699, 743, 936, 1149, 1289
FauNDI CATATG 2 cut(s) 514, 946
FbaI TGATCA 1 cut(s) 174
Fnu4HI GCNGC 8 cut(s) 36, 474, 669, 813, 960, 963, 1232, 1431
FokI GGATG 2 cut(s) 116, 1233
FriOI GRGCYC 2 cut(s) 429, 661
Fsp4HI GCNGC 8 cut(s) 36, 474, 669, 813, 960, 963, 1232, 1431
FspBI CTAG 3 cut(s) 665, 1079, 1215
FspI TGCGCA 1 cut(s) 1394
GlaI GCGC 2 cut(s) 1077, 1394
GluI GCNGC 8 cut(s) 36, 474, 669, 813, 960, 963, 1232, 1431
GsaI CCCAGC 2 cut(s) 231, 1371
GsuI CTGGAG 1 cut(s) 428
HaeII RGCGCY 1 cut(s) 1079
HaeIII GGCC 3 cut(s) 242, 254, 951
HapII CCGG 2 cut(s) 500, 1004
HhaI GCGC 2 cut(s) 1078, 1395
Hin1II CATG 8 cut(s) 68, 280, 568, 703, 747, 940, 1153, 1293
Hin6I GCGC 2 cut(s) 1076, 1393
HinP1I GCGC 2 cut(s) 1076, 1393
HincII GTYRAC 1 cut(s) 1311
HindII GTYRAC 1 cut(s) 1311
HpaII CCGG 2 cut(s) 500, 1004
HphI GGTGA 2 cut(s) 197, 224
Hpy166II GTNNAC 2 cut(s) 1252, 1311
Hpy188I TCNGA 6 cut(s) 25, 153, 495, 549, 883, 1038
Hpy188III TCNNGA 2 cut(s) 57, 523
Hpy8I GTNNAC 2 cut(s) 1252, 1311
HpyAV CCTTC 3 cut(s) 68, 112, 743
HpyCH4III ACNGT 1 cut(s) 623
HpyCH4IV ACGT 1 cut(s) 710
HpyF10VI GCNNNNNNNGC 4 cut(s) 239, 665, 1019, 1048
HpyF3I CTNAG 5 cut(s) 583, 726, 953, 1014, 1063
HpySE526I ACGT 1 cut(s) 710
Hsp92II CATG 8 cut(s) 68, 280, 568, 703, 747, 940, 1153, 1293
HspAI GCGC 2 cut(s) 1076, 1393
Ksp22I TGATCA 1 cut(s) 174
Kzo9I GATC 3 cut(s) 174, 451, 588
LmnI GCTCC 6 cut(s) 68, 90, 293, 656, 664, 992
Lsp1109I GCAGC 7 cut(s) 22, 460, 680, 824, 946, 974, 1243
MabI ACCWGGT 1 cut(s) 123
MaeI CTAG 3 cut(s) 665, 1079, 1215
MaeII ACGT 1 cut(s) 710
MaeIII GTNAC 5 cut(s) 203, 259, 1088, 1115, 1279
MalI GATC 3 cut(s) 176, 453, 590
MbiI CCGCTC 1 cut(s) 291
MboI GATC 3 cut(s) 174, 451, 588
MboII GAAGA 6 cut(s) 360, 379, 536, 593, 1102, 1286
MfeI CAATTG 2 cut(s) 927, 1083
MflI RGATCY 1 cut(s) 451
MhlI GDGCHC 7 cut(s) 45, 298, 429, 661, 741, 858, 1375
MlsI TGGCCA 1 cut(s) 242
MluNI TGGCCA 1 cut(s) 242
MlyI GAGTC 4 cut(s) 62, 87, 1027, 1399
Mox20I TGGCCA 1 cut(s) 242
MscI TGGCCA 1 cut(s) 242
MseI TTAA 6 cut(s) 486, 869, 1305, 1343, 1418, 1441
MslI CAYNNNNRTG 2 cut(s) 210, 974
Msp20I TGGCCA 1 cut(s) 242
MspI CCGG 2 cut(s) 500, 1004
MspR9I CCNGG 3 cut(s) 125, 250, 501
MunI CAATTG 2 cut(s) 927, 1083
Mva1269I GAATGC 1 cut(s) 1024
MvaI CCWGG 2 cut(s) 125, 250
MwoI GCNNNNNNNGC 4 cut(s) 239, 665, 1019, 1048
NciI CCSGG 1 cut(s) 501
NdeI CATATG 2 cut(s) 514, 946
NdeII GATC 3 cut(s) 174, 451, 588
NheI GCTAGC 1 cut(s) 1078
NlaIII CATG 8 cut(s) 68, 280, 568, 703, 747, 940, 1153, 1293
NmuCI GTSAC 5 cut(s) 203, 259, 1088, 1115, 1279
NsbI TGCGCA 1 cut(s) 1394
NspI RCATGY 2 cut(s) 940, 1293
NspV TTCGAA 1 cut(s) 464
OliI CACNNNNGTG 2 cut(s) 210, 974
PctI GAATGC 1 cut(s) 1024
PfeI GAWTC 6 cut(s) 148, 496, 519, 764, 847, 1184
PflFI GACNNNGTC 1 cut(s) 125
PflMI CCANNNNNTGG 1 cut(s) 249
PfoI TCCNGGA 1 cut(s) 499
PkrI GCNGC 8 cut(s) 37, 475, 670, 814, 961, 964, 1233, 1432
PleI GAGTC 4 cut(s) 61, 86, 1027, 1399
PpsI GAGTC 4 cut(s) 61, 86, 1027, 1399
Ppu21I YACGTR 1 cut(s) 711
PshBI ATTAAT 1 cut(s) 869
Psp124BI GAGCTC 1 cut(s) 661
Psp6I CCWGG 2 cut(s) 123, 248
PspEI GGTNACC 1 cut(s) 203
PspFI CCCAGC 2 cut(s) 227, 1367
PspGI CCWGG 2 cut(s) 123, 248
PspPI GGNCC 4 cut(s) 121, 252, 694, 1006
PstI CTGCAG 3 cut(s) 40, 814, 964
PstNI CAGNNNCTG 1 cut(s) 1436
PsuI RGATCY 1 cut(s) 451
PsyI GACNNNGTC 1 cut(s) 125
RsaI GTAC 2 cut(s) 630, 1261
RsaNI GTAC 2 cut(s) 629, 1260
RseI CAYNNNNRTG 2 cut(s) 210, 974
Rsr2I CGGWCCG 1 cut(s) 1006
RsrII CGGWCCG 1 cut(s) 1006
SacI GAGCTC 1 cut(s) 661
SaqAI TTAA 6 cut(s) 486, 869, 1305, 1343, 1418, 1441
SatI GCNGC 8 cut(s) 36, 474, 669, 813, 960, 963, 1232, 1431
Sau3AI GATC 3 cut(s) 174, 451, 588
Sau96I GGNCC 4 cut(s) 121, 252, 694, 1006
SchI GAGTC 4 cut(s) 62, 87, 1027, 1399
ScrFI CCNGG 3 cut(s) 125, 250, 501
SduI GDGCHC 7 cut(s) 45, 298, 429, 661, 741, 858, 1375
SexAI ACCWGGT 1 cut(s) 123
SfcI CTRYAG 3 cut(s) 36, 810, 960
SfuI TTCGAA 1 cut(s) 464
SinI GGWCC 3 cut(s) 121, 694, 1006
SmiMI CAYNNNNRTG 2 cut(s) 210, 974
SmlI CTYRAG 2 cut(s) 218, 299
SmoI CTYRAG 2 cut(s) 218, 299
SsiI CCGC 2 cut(s) 291, 1125
SspMI CTAG 3 cut(s) 665, 1079, 1215
SstI GAGCTC 1 cut(s) 661
StyD4I CCNGG 3 cut(s) 123, 248, 499
StyI CCWWGG 2 cut(s) 208, 1323
TaaI ACNGT 1 cut(s) 623
TaiI ACGT 1 cut(s) 713
TaqI TCGA 2 cut(s) 464, 674
TaqII GACCGA 2 cut(s) 682, 1023
TfiI GAWTC 6 cut(s) 148, 496, 519, 764, 847, 1184
Tru1I TTAA 6 cut(s) 486, 869, 1305, 1343, 1418, 1441
Tru9I TTAA 6 cut(s) 486, 869, 1305, 1343, 1418, 1441
TscAI CASTG 9 cut(s) 45, 243, 268, 591, 600, 961, 1120, 1194, 1248
TseFI GTSAC 5 cut(s) 203, 259, 1088, 1115, 1279
TseI GCWGC 8 cut(s) 35, 473, 668, 812, 959, 962, 1231, 1430
Tsp45I GTSAC 5 cut(s) 203, 259, 1088, 1115, 1279
TspDTI ATGAA 5 cut(s) 53, 265, 593, 747, 999
TspGWI ACGGA 1 cut(s) 361
TspRI CASTG 9 cut(s) 45, 243, 268, 591, 600, 961, 1120, 1194, 1248
Tth111I GACNNNGTC 1 cut(s) 125
Van91I CCANNNNNTGG 1 cut(s) 249
VpaK11BI GGWCC 3 cut(s) 121, 694, 1006
VspI ATTAAT 1 cut(s) 869
XapI RAATTY 3 cut(s) 351, 459, 1139
XceI RCATGY 2 cut(s) 940, 1293
XspI CTAG 3 cut(s) 665, 1079, 1215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.