FvH4_4g19751

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000660
Physical Location & Seq
Forward (+)
23299079 .. 23305326
6248 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g19751.t2

Sequence Viewer

Length: 1956 bp
ATGGACAGTTTCACTCCACTAGCAGAGTTGGAGCTGCTGAAGAAGATCGAAATGCTGGAAGAGGATCACGCCCGCCTCCAGCATGACATGTCCCAACTTAACCGCCCCCGCCGCCGGATCACCAGAACAAGAGGCGGTGCCGGTCGGCTGCCGTCGAGTTTTAATTTCAGTGACCGGCAATATCTCAACATATTGGAGTCACTTGGGCAGTCTGTGCATGTTATGGATCCTCATGATCGTATAATCTACTGGAATAGAAGTGCCGAAAAGCTGTTTGGATATTCTGCGGAAGAGGCCATCGGACATTGTTCCATTAAGCTGGTAGTAGATATCAGGGACCGTGGTGCAGCATATAATATAGTCCACCGTGTCAACCACGGGGAGAGATGGACTGGGATGTTCCCTGTAAAGAAAAAATGCGGGGAGAGGTTTACAATTATTGTAACAAATAGTCCATTCTATGATGATTCTGGGAATATAATTGGGCTTGTTTCTACATGTGCTGATGCTCAGGCCTTTCGCGACATGAGGTTTCCAATGACAGCTGAGAAACAGCCACAACAAGATTTAAGCTCCAGCACTCAAGGGGCCAGTGTTACAACTAAACTTGGTGTTGATCCTCAGCAGCCTCTGCGGAAAGCAATTTCATCAAAACTAACAAACTTGGCATCGAGGGTGAGTAACAAAGTCAAGTCAAAAATTCAGGCAAGAGAAAACAGCATGGATTCCACAGGTGAGACTGTTGATAGTCATCATCAGTTTTATGGTTCAGACTCTGTGGCATCTGCCAATAAGGAGGATGGTATTGCAAGTGAGACTAGCACAACTTTAGAAACTACATCCCCAATATTTAACCATGTTGAGAGCCACCCTCTCCGAGAACCCTCTATAGATTCTGACAGTGAGAATGAAGAAAAATCTTCGATTCACAAGATAATAGTTTCAAAGGCAGAAGCATGGATTAGTAAGAAAGGGATAGCATGGCCTTGGAAAGGAAATGAGCGAGATGGTTCAGTGGCTAGGGCCAGTGGTTTTGTTTGGCCCCGGTTTCATAATGATCAAGTCAATGTTGGTGTTCCTCAGAAGAGTTATTGTGTTTCAAATCCAGAAATTCAGGTGAGCGGAAGTAATCGACCAACATGTAAAAATGATGAGTCTCTAGGATCGTGGACCTCTCCATTTGATATTAACACCATAAGCCCTACCATCAGCCTTAAAAGTGCCAGCAGTAGTGCTTTGACTATGGTGGATGTGGACACTGACTGCTTGGATTATGAAATCTTTTGGGAAGACATGATAATTGGAGCACAGATTGGGCAAGGTTCATGTGGAACTGTGTACCATGGTCAGTGGGAAGGATCGGATGTTGCCATTAAGGTATTCTCCAAGCTAGAATATTCAGATGATATGTTACTTTCCTTCAGACAAGAGGTATCTCTTATGAAAAGGCTTCGACATCCAAATGTTTTGCTCTTCATGGGAGCTGTGACTTCACCTCAGCGTCTCTGCATTGTCACAGAGTTCCTACCACGTGGCAGTTTGTTTCAAATACTACAGAGGAAACCATCAAAACTAGACTGGAGACGACGTGTTAATATGGCTATGGATATAGCATGGGGCATGAATTATCTTCATCATTTCAACCCACCAATCATTCATCGAGACTTGAAGTCTTCAAATCTCCTAGTTGATAAGAACTGGACTGTCAAGGTCTGCCACATTTATTGGTTCTTTTTCTTAAGGCCTTCGATTTCATTTGTTGTTGTCCAATTTGTTTTTATCCCCTTCTGGTTCTGTATCAAGTTCAGAAGTGATCCGTCTGATGTTATCATCAGGTTGGCGATTTTGGTCTTTCACGTCTTAAGCACGAAACTTTTCTTATCAACAAGAGTGGCAGGGGAACGGTACTATAACTGGCATTCGCTGCAACCTTCTTTCCTAATTGTACTAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS PAS_9 Pkinase_Tyr

Protein Analysis

652

Amino Acids

73.87

Weight (kDa)

8.39

Isoelectric Point (pI)

40.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS PF00989 60 - 169 2.7e-13 PAS fold
PAS_4 PF08448 65 - 174 5.2e-10 PAS fold
PAS_9 PF13426 72 - 169 1.9e-08 PAS domain
PAS_3 PF08447 81 - 166 2.4e-07 PAS fold
PK_Tyr_Ser-Thr PF07714 434 - 572 8.9e-34 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 435 - 572 5.4e-28 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 137
AccBSI CCGCTC 1 cut(s) 1122
AccII CGCG 1 cut(s) 522
AciI CCGC 9 cut(s) 73, 103, 109, 112, 135, 287, 420, 634, 1122
AclWI GGATC 8 cut(s) 72, 125, 221, 234, 611, 1171, 1366, 1808
AcsI RAATTY 2 cut(s) 699, 1110
AcuI CTGAAG 2 cut(s) 59, 1405
AcvI CACGTG 1 cut(s) 1532
AfaI GTAC 3 cut(s) 1340, 1907, 1947
AfiI CCNNNNNNNGG 2 cut(s) 114, 992
AflII CTTAAG 2 cut(s) 1738, 1861
AflIII ACRYGT 4 cut(s) 87, 497, 1139, 1588
AgsI TTSAA 6 cut(s) 945, 1101, 1547, 1642, 1669, 1677
AhdI GACNNNNNGTC 1 cut(s) 1669
AjiI CACGTC 2 cut(s) 1589, 1858
AjuI GAANNNNNNNTTGG 2 cut(s) 258, 290
AluBI AGCT 7 cut(s) 34, 271, 319, 545, 573, 1390, 1484
AluI AGCT 7 cut(s) 34, 271, 319, 545, 573, 1390, 1484
Alw21I GWGCWC 1 cut(s) 1309
Alw26I GTCTC 6 cut(s) 731, 809, 1161, 1508, 1576, 1656
AlwI GGATC 8 cut(s) 72, 125, 221, 234, 611, 1171, 1366, 1808
AlwNI CAGNNNCTG 2 cut(s) 631, 776
AoxI GGCC 7 cut(s) 294, 513, 588, 983, 1023, 1040, 1742
ApeKI GCWGC 5 cut(s) 34, 148, 347, 625, 1924
ApoI RAATTY 2 cut(s) 699, 1110
Asp700I GAANNNNTTC 1 cut(s) 1874
AspS9I GGNCC 5 cut(s) 337, 588, 1023, 1041, 1170
AsuC2I CCSGG 1 cut(s) 1045
AsuHPI GGTGA 5 cut(s) 112, 688, 746, 1129, 1485
AvaII GGWCC 2 cut(s) 337, 1170
BamHI GGATCC 1 cut(s) 226
BanI GGYRCC 1 cut(s) 137
BbrPI CACGTG 1 cut(s) 1532
BbsI GAAGAC 2 cut(s) 1296, 1665
Bbv12I GWGCWC 1 cut(s) 1309
BbvCI CCTCAGC 2 cut(s) 621, 1497
BbvI GCAGC 5 cut(s) 21, 135, 359, 637, 1911
BccI CCATC 6 cut(s) 305, 381, 794, 1001, 1214, 1573
BceAI ACGGC 1 cut(s) 136
BclI TGATCA 1 cut(s) 1057
BcnI CCSGG 1 cut(s) 1045
BcoDI GTCTC 6 cut(s) 731, 809, 1161, 1508, 1576, 1656
BfaI CTAG 7 cut(s) 20, 819, 1020, 1160, 1391, 1574, 1685
BfmI CTRYAG 2 cut(s) 888, 1553
BfrI CTTAAG 2 cut(s) 1738, 1861
BisI GCNGC 6 cut(s) 35, 112, 149, 348, 626, 1925
BlsI GCNGC 6 cut(s) 36, 113, 150, 349, 627, 1926
Bme1390I CCNGG 1 cut(s) 1045
Bme18I GGWCC 2 cut(s) 337, 1170
BmeRI GACNNNNNGTC 1 cut(s) 1669
BmgBI CACGTC 2 cut(s) 1589, 1858
BmgT120I GGNCC 5 cut(s) 337, 588, 1023, 1041, 1170
BmiI GGNNCC 5 cut(s) 139, 228, 338, 589, 1043
BmrFI CCNGG 1 cut(s) 1045
BmrI ACTGGG 1 cut(s) 402
BmsI GCATC 3 cut(s) 496, 677, 791
BmuI ACTGGG 1 cut(s) 402
BpiI GAAGAC 2 cut(s) 1296, 1665
BplI GAGNNNNNCTC 2 cut(s) 856, 888
BpmI CTGGAG 3 cut(s) 62, 559, 1600
Bpu10I CCTNAGC 3 cut(s) 510, 621, 1497
BpuEI CTTGAG 1 cut(s) 567
BpuMI CCSGG 1 cut(s) 1045
BsaAI YACGTR 1 cut(s) 1532
BsaBI GATNNNNATC 1 cut(s) 750
BsaJI CCNNGG 5 cut(s) 340, 376, 986, 1043, 1342
BsaXI ACNNNNNCTCC 2 cut(s) 1573, 1603
Bsc4I CCNNNNNNNGG 2 cut(s) 114, 992
Bse118I RCCGGY 2 cut(s) 140, 174
Bse1I ACTGG 7 cut(s) 254, 397, 591, 1026, 1583, 1703, 1919
Bse8I GATNNNNATC 1 cut(s) 750
BseDI CCNNGG 5 cut(s) 340, 376, 986, 1043, 1342
BseGI GGATG 6 cut(s) 402, 805, 839, 1255, 1369, 1456
BseJI GATNNNNATC 1 cut(s) 750
BseLI CCNNNNNNNGG 2 cut(s) 114, 992
BseMII CTCAG 5 cut(s) 524, 537, 635, 1094, 1511
BseNI ACTGG 7 cut(s) 254, 397, 591, 1026, 1583, 1703, 1919
BseXI GCAGC 5 cut(s) 21, 135, 359, 637, 1911
BsgI GTGCAG 1 cut(s) 366
Bsh1236I CGCG 1 cut(s) 522
Bsh1285I CGRYCG 1 cut(s) 145
BshFI GGCC 7 cut(s) 296, 515, 590, 985, 1025, 1042, 1744
BshNI GGYRCC 1 cut(s) 137
BsiEI CGRYCG 1 cut(s) 145
BsiHKAI GWGCWC 1 cut(s) 1309
BsiSI CCGG 4 cut(s) 115, 141, 175, 1045
BslFI GGGAC 2 cut(s) 76, 350
BslI CCNNNNNNNGG 2 cut(s) 114, 992
BsmAI GTCTC 6 cut(s) 731, 809, 1161, 1508, 1576, 1656
BsmBI CGTCTC 2 cut(s) 1508, 1576
BsmFI GGGAC 2 cut(s) 76, 350
BsmI GAATGC 1 cut(s) 1918
BsnI GGCC 7 cut(s) 296, 515, 590, 985, 1025, 1042, 1744
Bsp1286I GDGCHC 1 cut(s) 1309
Bsp19I CCATGG 1 cut(s) 1342
Bsp68I TCGCGA 1 cut(s) 522
BspACI CCGC 9 cut(s) 73, 103, 109, 112, 135, 287, 420, 634, 1122
BspANI GGCC 7 cut(s) 296, 515, 590, 985, 1025, 1042, 1744
BspCNI CTCAG 5 cut(s) 523, 538, 634, 1093, 1510
BspFNI CGCG 1 cut(s) 522
BspHI TCATGA 1 cut(s) 232
BspLI GGNNCC 5 cut(s) 139, 228, 338, 589, 1043
BspPI GGATC 8 cut(s) 72, 125, 221, 234, 611, 1171, 1366, 1808
BspQI GCTCTTC 1 cut(s) 1478
BspT107I GGYRCC 1 cut(s) 137
BspTI CTTAAG 2 cut(s) 1738, 1861
BsrBI CCGCTC 1 cut(s) 1122
BsrFI RCCGGY 2 cut(s) 140, 174
BsrI ACTGG 7 cut(s) 254, 397, 591, 1026, 1583, 1703, 1919
BssAI RCCGGY 2 cut(s) 140, 174
BssECI CCNNGG 5 cut(s) 340, 376, 986, 1043, 1342
BssT1I CCWWGG 2 cut(s) 986, 1342
Bst4CI ACNGT 8 cut(s) 8, 341, 368, 742, 902, 1336, 1705, 1905
Bst6I CTCTTC 4 cut(s) 54, 285, 1079, 1478
BstAFI CTTAAG 2 cut(s) 1738, 1861
BstAPI GCANNNNNTGC 3 cut(s) 214, 631, 1924
BstBAI YACGTR 1 cut(s) 1532
BstC8I GCNNGC 2 cut(s) 73, 1225
BstDEI CTNAG 5 cut(s) 510, 546, 621, 1080, 1497
BstDSI CCRYGG 3 cut(s) 340, 376, 1342
BstENI CCTNNNNNAGG 1 cut(s) 990
BstF5I GGATG 6 cut(s) 402, 805, 839, 1255, 1369, 1456
BstFNI CGCG 1 cut(s) 522
BstMAI GTCTC 6 cut(s) 731, 809, 1161, 1508, 1576, 1656
BstMCI CGRYCG 1 cut(s) 145
BstMWI GCNNNNNNNGC 5 cut(s) 111, 214, 293, 631, 1924
BstNSI RCATGY 4 cut(s) 91, 221, 501, 1143
BstSCI CCNGG 1 cut(s) 1043
BstSFI CTRYAG 2 cut(s) 888, 1553
BstUI CGCG 1 cut(s) 522
BstV1I GCAGC 5 cut(s) 21, 135, 359, 637, 1911
BstV2I GAAGAC 2 cut(s) 1296, 1665
BstX2I RGATCY 1 cut(s) 226
BstXI CCANNNNNNTGG 1 cut(s) 319
BstYI RGATCY 1 cut(s) 226
BsuRI GGCC 7 cut(s) 296, 515, 590, 985, 1025, 1042, 1744
BtgI CCRYGG 3 cut(s) 340, 376, 1342
BtrI CACGTC 2 cut(s) 1589, 1858
BtsCI GGATG 6 cut(s) 402, 805, 839, 1255, 1369, 1456
BtsIMutI CAGTG 7 cut(s) 175, 598, 907, 1020, 1033, 1257, 1355
BtuMI TCGCGA 1 cut(s) 522
Cac8I GCNNGC 2 cut(s) 73, 1225
CaiI CAGNNNCTG 2 cut(s) 631, 776
CciI TCATGA 1 cut(s) 232
Cfr10I RCCGGY 2 cut(s) 140, 174
Cfr13I GGNCC 5 cut(s) 337, 588, 1023, 1041, 1170
CseI GACGC 1 cut(s) 1490
Csp6I GTAC 3 cut(s) 1339, 1906, 1946
CspCI CAANNNNNGTGG 4 cut(s) 1706, 1741, 1872, 1907
CviQI GTAC 3 cut(s) 1339, 1906, 1946
DdeI CTNAG 5 cut(s) 510, 546, 621, 1080, 1497
DriI GACNNNNNGTC 1 cut(s) 1669
Eam1104I CTCTTC 4 cut(s) 54, 285, 1079, 1478
Eam1105I GACNNNNNGTC 1 cut(s) 1669
EarI CTCTTC 4 cut(s) 54, 285, 1079, 1478
Eco130I CCWWGG 2 cut(s) 986, 1342
Eco147I AGGCCT 2 cut(s) 515, 1744
Eco32I GATATC 1 cut(s) 331
Eco47I GGWCC 2 cut(s) 337, 1170
Eco57I CTGAAG 2 cut(s) 59, 1405
Eco72I CACGTG 1 cut(s) 1532
EcoNI CCTNNNNNAGG 1 cut(s) 990
EcoRV GATATC 1 cut(s) 331
EcoT14I CCWWGG 2 cut(s) 986, 1342
ErhI CCWWGG 2 cut(s) 986, 1342
Esp3I CGTCTC 2 cut(s) 1508, 1576
FaqI GGGAC 2 cut(s) 76, 350
FauI CCCGC 3 cut(s) 80, 116, 413
FbaI TGATCA 1 cut(s) 1057
Fnu4HI GCNGC 6 cut(s) 35, 112, 149, 348, 626, 1925
FokI GGATG 6 cut(s) 409, 812, 826, 1262, 1376, 1443
Fsp4HI GCNGC 6 cut(s) 35, 112, 149, 348, 626, 1925
FspBI CTAG 7 cut(s) 20, 819, 1020, 1160, 1391, 1574, 1685
GluI GCNGC 6 cut(s) 35, 112, 149, 348, 626, 1925
GsuI CTGGAG 3 cut(s) 62, 559, 1600
HaeIII GGCC 7 cut(s) 296, 515, 590, 985, 1025, 1042, 1744
HapII CCGG 4 cut(s) 115, 141, 175, 1045
HgaI GACGC 1 cut(s) 1490
HincII GTYRAC 1 cut(s) 373
HindII GTYRAC 1 cut(s) 373
HinfI GANTC 7 cut(s) 197, 467, 725, 773, 893, 925, 1154
HpaII CCGG 4 cut(s) 115, 141, 175, 1045
HphI GGTGA 5 cut(s) 112, 688, 746, 1129, 1485
Hpy166II GTNNAC 6 cut(s) 364, 373, 432, 1170, 1255, 1339
Hpy188III TCNNGA 4 cut(s) 233, 521, 1106, 1661
Hpy8I GTNNAC 6 cut(s) 364, 373, 432, 1170, 1255, 1339
Hpy99I CGWCG 2 cut(s) 157, 1590
HpyAV CCTTC 5 cut(s) 1349, 1429, 1755, 1795, 1941
HpyCH4III ACNGT 8 cut(s) 8, 341, 368, 742, 902, 1336, 1705, 1905
HpyCH4IV ACGT 3 cut(s) 1531, 1588, 1857
HpyCH4V TGCA 5 cut(s) 217, 347, 809, 1509, 1927
HpyF10VI GCNNNNNNNGC 5 cut(s) 111, 214, 293, 631, 1924
HpyF3I CTNAG 5 cut(s) 510, 546, 621, 1080, 1497
HpySE526I ACGT 3 cut(s) 1531, 1588, 1857
Ksp22I TGATCA 1 cut(s) 1057
LguI GCTCTTC 1 cut(s) 1478
LmnI GCTCC 4 cut(s) 31, 578, 1304, 1481
Lsp1109I GCAGC 5 cut(s) 21, 135, 359, 637, 1911
LweI GCATC 3 cut(s) 496, 677, 791
MaeI CTAG 7 cut(s) 20, 819, 1020, 1160, 1391, 1574, 1685
MaeII ACGT 3 cut(s) 1531, 1588, 1857
MaeIII GTNAC 8 cut(s) 170, 198, 442, 595, 680, 1410, 1486, 1513
MbiI CCGCTC 1 cut(s) 1122
MflI RGATCY 1 cut(s) 226
MhlI GDGCHC 1 cut(s) 1309
MlyI GAGTC 3 cut(s) 206, 767, 1163
MmeI TCCRAC 1 cut(s) 9
MroXI GAANNNNTTC 1 cut(s) 1874
MslI CAYNNNNRTG 1 cut(s) 1461
MspA1I CMGCKG 1 cut(s) 545
MspCI CTTAAG 2 cut(s) 1738, 1861
MspI CCGG 4 cut(s) 115, 141, 175, 1045
MspR9I CCNGG 1 cut(s) 1045
Mva1269I GAATGC 1 cut(s) 1918
MvnI CGCG 1 cut(s) 522
MwoI GCNNNNNNNGC 5 cut(s) 111, 214, 293, 631, 1924
NciI CCSGG 1 cut(s) 1045
NcoI CCATGG 1 cut(s) 1342
NlaIV GGNNCC 5 cut(s) 139, 228, 338, 589, 1043
NmuCI GTSAC 4 cut(s) 170, 198, 1486, 1513
NruI TCGCGA 1 cut(s) 522
NspI RCATGY 4 cut(s) 91, 221, 501, 1143
PagI TCATGA 1 cut(s) 232
PceI AGGCCT 2 cut(s) 515, 1744
PciI ACATGT 3 cut(s) 87, 497, 1139
PciSI GCTCTTC 1 cut(s) 1478
PctI GAATGC 1 cut(s) 1918
PdmI GAANNNNTTC 1 cut(s) 1874
PfeI GAWTC 4 cut(s) 467, 725, 893, 925
PkrI GCNGC 6 cut(s) 36, 113, 150, 349, 627, 1926
PleI GAGTC 3 cut(s) 205, 767, 1162
PmaCI CACGTG 1 cut(s) 1532
PmlI CACGTG 1 cut(s) 1532
PpsI GAGTC 3 cut(s) 205, 767, 1162
Ppu21I YACGTR 1 cut(s) 1532
PscI ACATGT 3 cut(s) 87, 497, 1139
PspCI CACGTG 1 cut(s) 1532
PspN4I GGNNCC 5 cut(s) 139, 228, 338, 589, 1043
PspPI GGNCC 5 cut(s) 337, 588, 1023, 1041, 1170
PstNI CAGNNNCTG 2 cut(s) 631, 776
PsuI RGATCY 1 cut(s) 226
PvuII CAGCTG 1 cut(s) 545
RruI TCGCGA 1 cut(s) 522
RsaI GTAC 3 cut(s) 1340, 1907, 1947
RsaNI GTAC 3 cut(s) 1339, 1906, 1946
RseI CAYNNNNRTG 1 cut(s) 1461
SapI GCTCTTC 1 cut(s) 1478
SatI GCNGC 6 cut(s) 35, 112, 149, 348, 626, 1925
Sau96I GGNCC 5 cut(s) 337, 588, 1023, 1041, 1170
SchI GAGTC 3 cut(s) 206, 767, 1163
ScrFI CCNGG 1 cut(s) 1045
SduI GDGCHC 1 cut(s) 1309
SfaNI GCATC 3 cut(s) 496, 677, 791
SfcI CTRYAG 2 cut(s) 888, 1553
SinI GGWCC 2 cut(s) 337, 1170
SmiMI CAYNNNNRTG 1 cut(s) 1461
SmlI CTYRAG 3 cut(s) 582, 1738, 1861
SmoI CTYRAG 3 cut(s) 582, 1738, 1861
SseBI AGGCCT 2 cut(s) 515, 1744
SsiI CCGC 9 cut(s) 73, 103, 109, 112, 135, 287, 420, 634, 1122
SspI AATATT 2 cut(s) 849, 1397
SspMI CTAG 7 cut(s) 20, 819, 1020, 1160, 1391, 1574, 1685
StuI AGGCCT 2 cut(s) 515, 1744
StyD4I CCNGG 1 cut(s) 1043
StyI CCWWGG 2 cut(s) 986, 1342
TaaI ACNGT 8 cut(s) 8, 341, 368, 742, 902, 1336, 1705, 1905
TaiI ACGT 3 cut(s) 1534, 1591, 1860
TaqI TCGA 8 cut(s) 48, 155, 671, 923, 1132, 1453, 1660, 1748
TatI WGTACW 1 cut(s) 1945
TauI GCSGC 1 cut(s) 114
TfiI GAWTC 4 cut(s) 467, 725, 893, 925
TscAI CASTG 7 cut(s) 175, 598, 907, 1020, 1033, 1264, 1355
TseFI GTSAC 4 cut(s) 170, 198, 1486, 1513
TseI GCWGC 5 cut(s) 34, 148, 347, 625, 1924
Tsp45I GTSAC 4 cut(s) 170, 198, 1486, 1513
TspGWI ACGGA 1 cut(s) 1806
TspRI CASTG 7 cut(s) 175, 598, 907, 1020, 1033, 1264, 1355
Vha464I CTTAAG 2 cut(s) 1738, 1861
VpaK11BI GGWCC 2 cut(s) 337, 1170
XagI CCTNNNNNAGG 1 cut(s) 990
XapI RAATTY 2 cut(s) 699, 1110
XceI RCATGY 4 cut(s) 91, 221, 501, 1143
XmnI GAANNNNTTC 1 cut(s) 1874
XspI CTAG 7 cut(s) 20, 819, 1020, 1160, 1391, 1574, 1685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.